Citrus Sinensis ID: 017336

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370---
Protein Sequence
MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED
Secondary Structure (PSIPRED)
ccEEEEEEEEccccccEEEEEEEccccccEEEEEEEEEEcccccHHHHccccccccccccccccccEEEEEEcccccccccccEEEEccccccccccccccccccccccccccccccccccccccEEEEccEEEEEEEcccccccEEEEEccEEEEEcccccccEEEEEccccccccccEEEEcccccccEEEEEcccHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHccccEEEccccccccHHHHHHHHHcccccEEEEccccHHHHHHHHHHHccccEEEEEEEccccccEEEcccccEEcccEEEEEEcccccccccHHHHHHHHHcccccccccEEccccHHHHHHHHHHHHccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
cccEEEEEEcccccccEEEEEEEccccccEEEEEEEEEEEcHHHHHHHHcccccccccEccccEEEEEEEEEcccccccccccEEEEcccccccccHHHHccccccccccHHHHHcccccccccccEEEccEEEEccccccccEcEEEEEHHHEEEccccccHHHHHHHHcHHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHcccEEEcHHHccccHHHHHHHHccccEcEEEEccccHHHHHHHHHcEcccccEEEEcccccccccEEEccHHHHcccEEEEccHHHccHHHHHHHHHHHHHccccccHHHEEEEEEHHHcHHHHHHHHHccccEEEEEccc
Coil and Loop (DISEMBL)
MSSTAAAVAWEagkpliiqdvevappqaMEVRIKIKYtslcrtdlyfweskgqtplfprifgheaagvvesvgegvsdlevgdhvlpvftgecgdcrhcrsdvsnmcdllrinpvrgvmladgqsrfsingepvnhflgtstFSEYTVVHsgcvakinplapldkvcilscgvstglgatlnvakpergssvavFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKfgvtdfvntsehdrPIQEVIAEMTnggvdrsvectgnIDNMISAFECVHDGWGVAVLVgvpskdavfmtkpinvlnertlkgtffgnykprtdlpsVVDMYMNKQLELEKFithripfseINKAFEYMVKGEGLRCIISMED
Flexible Loop (DISEMBL)
MSSTAAAVAweagkpliiqdvevappQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAegariagasriigvdrsskrFEEAkkfgvtdfvntsehdrpIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMtkpinvlnertlkgtffgnykprtdlPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED
Low Complexity Region (SEG)
MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHeaagvvesvgegvsdlevgdHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERgssvavfglgavglaaaegariagasriigVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED
Disordered region (IsUnstruct)
******AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS**RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII****
Disordered Region (DISOPRED)
*SSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME*
Disordered Region (DISEMBL)
********AWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED
Disordered Region (DISPRO)
MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	373	2.2.26 [Sep-21-2011]
P48977	380	Alcohol dehydrogenase OS=	N/A	no	1.0	0.981	0.789	0.0
P14674	380	Alcohol dehydrogenase 2 O	N/A	no	0.986	0.968	0.801	0.0
P14673	380	Alcohol dehydrogenase 1 O	N/A	no	0.986	0.968	0.801	0.0
P14675	380	Alcohol dehydrogenase 3 O	N/A	no	0.986	0.968	0.801	0.0
P28032	380	Alcohol dehydrogenase 2 O	N/A	no	0.986	0.968	0.796	1e-180
P17648	380	Alcohol dehydrogenase OS=	N/A	no	0.986	0.968	0.785	1e-179
Q2R8Z5	379	Alcohol dehydrogenase 1 O	yes	no	0.986	0.970	0.782	1e-178
Q75ZX4	379	Alcohol dehydrogenase 1 O	N/A	no	0.986	0.970	0.782	1e-178
P14219	379	Alcohol dehydrogenase 1 O	N/A	no	0.986	0.970	0.785	1e-178
P25141	382	Alcohol dehydrogenase 1 O	N/A	no	0.983	0.960	0.782	1e-178

>sp|P48977|ADH_MALDO Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1

 Score =  637 bits (1643), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 300/380 (78%), Positives = 342/380 (90%), Gaps = 7/380 (1%)

Query: 1   MSSTA-------AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 53
           MS+TA       AAVAWEAGKPL+I++VEVAPPQA EVRIKI +TSLC TD+YFWE+KGQ
Sbjct: 1   MSNTAGQVIRCRAAVAWEAGKPLVIEEVEVAPPQANEVRIKILFTSLCHTDVYFWEAKGQ 60

Query: 54  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 113
            PLFPRI+GHEA G+VESVGEGV+DL+ GDHVLPVFTGEC DC HC+S+ SNMCDLLRIN
Sbjct: 61  NPLFPRIYGHEAGGIVESVGEGVTDLKAGDHVLPVFTGECKDCAHCKSEESNMCDLLRIN 120

Query: 114 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 173
             RGVML+DG+SRFSI G+P+ HF+GTSTFSEYTVVH GC+AKINP APLDKVC+LSCG+
Sbjct: 121 TDRGVMLSDGKSRFSIKGKPIYHFVGTSTFSEYTVVHVGCLAKINPSAPLDKVCLLSCGI 180

Query: 174 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 233
           STGLGATLNVAKP++GS+VAVFGLGAVGLAAAEGAR++GASRIIGVD  S RFEEAKKFG
Sbjct: 181 STGLGATLNVAKPKKGSTVAVFGLGAVGLAAAEGARLSGASRIIGVDLHSDRFEEAKKFG 240

Query: 234 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 293
           VT+FVN   H++P+QEVIAE+TN GVDRS+ECTG+ + MISAFECVHDGWGVAVLVGVP 
Sbjct: 241 VTEFVNPKAHEKPVQEVIAELTNRGVDRSIECTGSTEAMISAFECVHDGWGVAVLVGVPH 300

Query: 294 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 353
           KDAVF T P+N LNERTLKGTFFGNYK RTD+PSVV+ YMNK+LELEKFITH++PFSEIN
Sbjct: 301 KDAVFKTHPVNFLNERTLKGTFFGNYKTRTDIPSVVEKYMNKELELEKFITHKVPFSEIN 360

Query: 354 KAFEYMVKGEGLRCIISMED 373
           KAFEYM+KGEGLRCII ME+
Sbjct: 361 KAFEYMLKGEGLRCIIRMEE 380

Malus domestica (taxid: 3750)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1

>sp|P14674|ADH2_SOLTU Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1

 Score =  635 bits (1638), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 295/368 (80%), Positives = 338/368 (91%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAVAWEAGKPL++++V+VAPPQ MEVR+KI YTSLC TD+YFWE+KGQ P+FPRI GHEA
Sbjct: 13  AAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEA 72

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
           AG+VESVGEGV++L  GDHVLPVFTGEC DC HC+S+ SNMC LLRIN  RGVM+ DGQS
Sbjct: 73  AGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQS 132

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RFSING+P+ HF+GTSTFSEYTVVH GCVAKINPLAPLDKVC+LSCG+STGLGATLNVAK
Sbjct: 133 RFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAK 192

Query: 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
           P +GSSVA+FGLGAVGLAAAEGARIAGASRIIGVD ++ RFE+AKKFGVT+FVN  ++ +
Sbjct: 193 PTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSK 252

Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           P+QEVIAEMT+GGVDRSVECTG+ID MISAFECVHDGWGVAVLVGVP K+AVF T P+N 
Sbjct: 253 PVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNF 312

Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           LNERTLKGTFFGNYKPR+D+PSVV+ YMNK+LELEKFITH +PF+EINKAF+ M+KGEGL
Sbjct: 313 LNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGL 372

Query: 366 RCIISMED 373
           RCII+MED
Sbjct: 373 RCIITMED 380

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P14673|ADH1_SOLTU Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1

 Score =  635 bits (1638), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 295/368 (80%), Positives = 339/368 (92%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAVAWEAGKPL++++V+VAPPQ MEVR+KI YTSLC TD+YFWE+KGQ P+FPRI GHEA
Sbjct: 13  AAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEA 72

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
           AG+VESVGEGV++L  GDHVLPVFTGEC DC HC+S+ SNMC LLRIN  RGVM+ DGQS
Sbjct: 73  AGIVESVGEGVTELGPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQS 132

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RFSING+P+ HF+GTSTFSEYTVVH GCVAKINPLAPLDKVC+LSCG+STGLGATLNVAK
Sbjct: 133 RFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAK 192

Query: 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
           P +GSSVA+FGLGAVGLAAAEGARIAGASRIIGVD ++ RFE+AKKFGVT+FVN  ++ +
Sbjct: 193 PTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSK 252

Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           P+QEVIAEMT+GGVDRSVECTG+ID MISAFECVHDGWGVAVLVGVP K+AVF T P+N+
Sbjct: 253 PVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNL 312

Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           LNERTLKGTFFGNYKPR+D+PSVV+ YMNK+LELEKFITH +PF+EINKAF+ M+KGEGL
Sbjct: 313 LNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGL 372

Query: 366 RCIISMED 373
           RCII+MED
Sbjct: 373 RCIITMED 380

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P14675|ADH3_SOLTU Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1

 Score =  635 bits (1637), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 295/368 (80%), Positives = 338/368 (91%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAVAWEAGKPL++++V+VAPPQ MEVR+KI YTSLC TD+YFWE+KGQ P+FPRI GHEA
Sbjct: 13  AAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEA 72

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
           AG+VESVGEGV++L  GDHVLPVFTGEC DC HC+S+ SNMC LLRIN  RGVM+ DGQS
Sbjct: 73  AGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQS 132

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RFSING+P+ HF+GTSTFSEYTVVH GCVAKINPLAPLDKVC+LSCG+STGLGATLNVAK
Sbjct: 133 RFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAK 192

Query: 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
           P +GSSVA+FGLGAVGLAAAEGARIAGASRIIGVD ++ RFE+AKKFGVT+FVN  ++ +
Sbjct: 193 PTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSK 252

Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           P+QEVIAEMT+GGVDRSVECTG+ID MISAFECVHDGWGVAVLVGVP K+AVF T P+N 
Sbjct: 253 PVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNF 312

Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           LNERTLKGTFFGNYKPR+D+PSVV+ YMNK+LELEKFITH +PF+EINKAF+ M+KGEGL
Sbjct: 313 LNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGL 372

Query: 366 RCIISMED 373
           RCII+MED
Sbjct: 373 RCIITMED 380

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P28032|ADH2_SOLLC Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN=ADH2 PE=2 SV=2

 Score =  629 bits (1623), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 293/368 (79%), Positives = 335/368 (91%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAVAWEAGKPL++++V+VAPPQ MEVR+KI YTSLC TD+YFWE+KGQ P+FPRI GHEA
Sbjct: 13  AAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEA 72

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
           AG+VESVGEGV+DL  GDHVLPVFTGEC DC HC+S+ SNMC LLRIN  RGVML DG+S
Sbjct: 73  AGIVESVGEGVTDLAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMLNDGKS 132

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RFSING P+ HF+GTSTFSEYTVVH GCVAKINPLAPLDKVC+LSCG+STGLGA+LNVAK
Sbjct: 133 RFSINGNPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGASLNVAK 192

Query: 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
           P +GSSVA+FGLGAVGLAAAEGARIAGASRIIGVD ++ RFE+AKKFGVT+FVN  ++ +
Sbjct: 193 PTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSK 252

Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           P+QEVIAEMT+GGVDRSVECTG+ID MISAFECVHDGWGVAVLVGVP K+AVF T P+N 
Sbjct: 253 PVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPLNF 312

Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           LNERTLKGTFFGNYKPR+D+P VV+ YMNK+LELEKFITH +PF+EINKAF+ M+KGEGL
Sbjct: 313 LNERTLKGTFFGNYKPRSDIPCVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGL 372

Query: 366 RCIISMED 373
           RCII+M D
Sbjct: 373 RCIITMAD 380

Solanum lycopersicum (taxid: 4081)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P17648|ADH_FRAAN Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH PE=3 SV=2

 Score =  627 bits (1616), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 289/368 (78%), Positives = 335/368 (91%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAVAWEAGKPL+I++VEVAPPQA  VR+KI YTSLC TD+YFWE+KGQ PLFPRI+GHEA
Sbjct: 13  AAVAWEAGKPLVIEEVEVAPPQANVVRVKILYTSLCHTDVYFWEAKGQNPLFPRIYGHEA 72

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
            G+VESVGEGV+DL+ GDHVLPVFTGEC +C HC+S+ SNMCDLLRIN  RGVML DG+S
Sbjct: 73  GGIVESVGEGVTDLKAGDHVLPVFTGECKECDHCKSEESNMCDLLRINTDRGVMLNDGKS 132

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RFSI G+P+ HF+GTSTFS YTV H GC+AKINP +PLDKVCILSCG+STGLGATLNV K
Sbjct: 133 RFSIKGKPIYHFVGTSTFSVYTVTHVGCLAKINPQSPLDKVCILSCGISTGLGATLNVRK 192

Query: 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
           P++GS+VAVFGLGAVGLAAAEGAR+AGASRIIGVD +S RFEEAKKFG+T+FVN  +H +
Sbjct: 193 PKKGSTVAVFGLGAVGLAAAEGARMAGASRIIGVDLNSNRFEEAKKFGITEFVNPKDHKK 252

Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           P+QEVIAE+TNGGVDRS+ECTGNI  MI AFECVHDGWGVAVLVGVP KDAVF T P+N 
Sbjct: 253 PVQEVIAELTNGGVDRSIECTGNIQAMIPAFECVHDGWGVAVLVGVPHKDAVFTTHPMNF 312

Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           LNERTLKGTFFGNYKPRTD+PSVV+ YMNK+LE++KFITH++PFS+INKAF+YM+KGEG+
Sbjct: 313 LNERTLKGTFFGNYKPRTDIPSVVEKYMNKELEVDKFITHQLPFSQINKAFDYMLKGEGI 372

Query: 366 RCIISMED 373
           RCII+ME+
Sbjct: 373 RCIITMEE 380

This protein is responsible for the conversion of alcohols to aldehydes in plants and is important for NAD metabolism during anaerobic respiration.

Fragaria ananassa (taxid: 3747)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q2R8Z5|ADH1_ORYSJ Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2

 Score =  624 bits (1610), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 288/368 (78%), Positives = 333/368 (90%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAVAWEA KPL+I++VEVAPPQAMEVR+KI +TSLC TD+YFWE+KGQTP+FPRIFGHEA
Sbjct: 12  AAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEA 71

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
            G+VESVGEGV+DL  GDHVLPVFTGEC +C HC+S  SNMCDLLRIN  RGVM+ DG+S
Sbjct: 72  GGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKS 131

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RFSING+P+ HF+GTSTFSEYTV+H GCVAKINP APLDKVC+LSCG+STGLGAT+NVAK
Sbjct: 132 RFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGATINVAK 191

Query: 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
           P +GS+VA+FGLGAVGLAAAEGARIAGASRIIG+D ++ RFEEA+KFG T+FVN  +HD+
Sbjct: 192 PPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCTEFVNPKDHDK 251

Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           P+Q+V+AEMTNGGVDRSVECTGNI+ MI AFECVHDGWGVAVLVGVP KDA F T P+N 
Sbjct: 252 PVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNF 311

Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           LNERTLKGTFFGNYKPRTDLP+VV++YM K+LE+EKFITH +PFSEIN AF+ M KGEG+
Sbjct: 312 LNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTAFDLMHKGEGI 371

Query: 366 RCIISMED 373
           RCII ME+
Sbjct: 372 RCIIRMEN 379

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q75ZX4|ADH1_ORYSI Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1

 Score =  624 bits (1610), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 288/368 (78%), Positives = 333/368 (90%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAVAWEA KPL+I++VEVAPPQAMEVR+KI +TSLC TD+YFWE+KGQTP+FPRIFGHEA
Sbjct: 12  AAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEA 71

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
            G+VESVGEGV+DL  GDHVLPVFTGEC +C HC+S  SNMCDLLRIN  RGVM+ DG+S
Sbjct: 72  GGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKS 131

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RFSING+P+ HF+GTSTFSEYTV+H GCVAKINP APLDKVC+LSCG+STGLGAT+NVAK
Sbjct: 132 RFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGATINVAK 191

Query: 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
           P +GS+VA+FGLGAVGLAAAEGARIAGASRIIG+D ++ RFEEA+KFG T+FVN  +HD+
Sbjct: 192 PPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCTEFVNPKDHDK 251

Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           P+Q+V+AEMTNGGVDRSVECTGNI+ MI AFECVHDGWGVAVLVGVP KDA F T P+N 
Sbjct: 252 PVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNF 311

Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           LNERTLKGTFFGNYKPRTDLP+VV++YM K+LE+EKFITH +PFSEIN AF+ M KGEG+
Sbjct: 312 LNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTAFDLMHKGEGI 371

Query: 366 RCIISMED 373
           RCII ME+
Sbjct: 372 RCIIRMEN 379

Oryza sativa subsp. indica (taxid: 39946)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P14219|ADH1_PENAM Alcohol dehydrogenase 1 OS=Pennisetum americanum GN=ADH1 PE=2 SV=1

 Score =  624 bits (1609), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 289/368 (78%), Positives = 334/368 (90%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAVAWEAGKPL I++VEVAPPQAMEVR+KI YTSLC TD+YFWE+KGQTP+FPRIFGHEA
Sbjct: 12  AAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTSLCHTDVYFWEAKGQTPVFPRIFGHEA 71

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
            G++ESVGEGV+D+  GDHVLPVFTGEC +C HC+S  SNMCDLLRIN VRGVM+ DG+S
Sbjct: 72  GGIIESVGEGVTDVAPGDHVLPVFTGECKECPHCKSAESNMCDLLRINTVRGVMIGDGKS 131

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RFSING+P+ HF+GTSTFSEYTV+H GCVAKINP APLDKVC+LSCG+STGLGA++NVAK
Sbjct: 132 RFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGISTGLGASINVAK 191

Query: 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
           P +GS+VA+FGLGAVGLAAAEGARIAGASRIIGVD +  RFEEAKKFG T+FVN  +H++
Sbjct: 192 PPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFEEAKKFGCTEFVNPKDHNK 251

Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           P+QEV+A+MTNGGVDRSVECTGNI+ MI AFECVHDGWGVAVLVGVP KDA F T P+N 
Sbjct: 252 PVQEVLADMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNF 311

Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           LNERTLKGTFFGN+KPRTDLP+VV++YM K+LE+EKFITH +PFSEINKAF+ M KGEG+
Sbjct: 312 LNERTLKGTFFGNFKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINKAFDLMAKGEGI 371

Query: 366 RCIISMED 373
           RCII ME+
Sbjct: 372 RCIIRMEN 379

Pennisetum americanum (taxid: 4543)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P25141|ADH1_PETHY Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1

 Score =  624 bits (1608), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 288/368 (78%), Positives = 336/368 (91%), Gaps = 1/368 (0%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAVAWEAGKPL+I++VEVAPPQ MEVR+KI +TSLC TD+YFWE+KGQTPLFPRIFGHEA
Sbjct: 14  AAVAWEAGKPLVIEEVEVAPPQKMEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEA 73

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
            G+VESVGEGV+DL+ GDHVLPVFTGEC  CRHC+S+ SNMCDLLRIN  RGVM+ DGQ+
Sbjct: 74  GGIVESVGEGVTDLKPGDHVLPVFTGECQQCRHCKSEESNMCDLLRINTDRGVMIHDGQT 133

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RFS +G+P+ HF+GTSTFSEYTV HSGCV KI+P APLDKVC+LSCG+STGLGATLNVAK
Sbjct: 134 RFSKDGKPIYHFVGTSTFSEYTVCHSGCVTKIDPQAPLDKVCVLSCGISTGLGATLNVAK 193

Query: 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH-D 244
           P +GS+VA+FGLGAVGLAAAEGARIAGASRIIGVD +  RF +AKKFGVT+FVN  +H D
Sbjct: 194 PTKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFNDAKKFGVTEFVNPKDHGD 253

Query: 245 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN 304
           +P+Q+VIAEMT+GGVDRSVECTGN++ MISAFECVHDGWGVAVLVGVP+KD  F T P+N
Sbjct: 254 KPVQQVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMN 313

Query: 305 VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG 364
           +LNERTLKGTFFGNYKP++D+PSVVD YM K+LELEKFITH++PFSEINKAF+YM+KGE 
Sbjct: 314 LLNERTLKGTFFGNYKPKSDIPSVVDKYMKKELELEKFITHQVPFSEINKAFDYMLKGES 373

Query: 365 LRCIISME 372
           +RC+I+ME
Sbjct: 374 IRCMITME 381

This protein is responsible for the conversion of alcohols to aldehydes in plants and is important for NAD metabolism during anaerobic respiration.

Petunia hybrida (taxid: 4102)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	373
224093368	380	predicted protein [Populus trichocarpa]	0.994	0.976	0.806	0.0
118487636	380	unknown [Populus trichocarpa]	0.994	0.976	0.806	0.0
224093370	380	predicted protein [Populus trichocarpa]	0.994	0.976	0.804	0.0
359477028	415	PREDICTED: alcohol dehydrogenase 1 [Viti	0.983	0.884	0.806	0.0
342851389	380	alcohol dehydrogenase [Pyrus communis]	1.0	0.981	0.792	0.0
356508983	381	PREDICTED: alcohol dehydrogenase-like [G	0.986	0.965	0.817	0.0
225431501	380	PREDICTED: alcohol dehydrogenase 1 [Viti	0.994	0.976	0.796	0.0
295148815	380	alcohol dehydrogenase I [Vitis aestivali	0.997	0.978	0.794	0.0
296088562	380	unnamed protein product [Vitis vinifera]	0.983	0.965	0.806	0.0
255587152	380	alcohol dehydrogenase, putative [Ricinus	0.986	0.968	0.817	0.0

>gi|224093368|ref|XP_002309899.1| predicted protein [Populus trichocarpa] gi|222852802|gb|EEE90349.1| predicted protein [Populus trichocarpa]

 Score =  644 bits (1661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/378 (80%), Positives = 344/378 (91%), Gaps = 7/378 (1%)

Query: 1   MSSTA-------AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 53
           MSSTA       AAVAWEAGKPL++++VEVAPPQAMEVR+KI +TSLC TD+YFWE+KGQ
Sbjct: 1   MSSTAGQVIRCKAAVAWEAGKPLVMEEVEVAPPQAMEVRLKILFTSLCHTDVYFWEAKGQ 60

Query: 54  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 113
           TPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC+S+ SNMCDLLRIN
Sbjct: 61  TPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEESNMCDLLRIN 120

Query: 114 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 173
             RGVML DG+SRFSI G+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCG+
Sbjct: 121 TDRGVMLNDGKSRFSIKGQPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCVLSCGI 180

Query: 174 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 233
           STGLGATLNVAKP++GSSVA+FGLGAVGLAAAEGARIAGASRIIGVD +S RF+EAKKFG
Sbjct: 181 STGLGATLNVAKPKKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNSNRFDEAKKFG 240

Query: 234 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 293
           VT+FVN  +H++P+QEVIAEMTNGGVDRSVECTG+I+ MISAFECVHDGWGVAVLVGVP+
Sbjct: 241 VTEFVNPKDHNKPVQEVIAEMTNGGVDRSVECTGSINAMISAFECVHDGWGVAVLVGVPN 300

Query: 294 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 353
           KD  F T P+NVLNERTLKGTFFGNYKPR+DLPSVV+ YMNK+LELEKFITH +PFSEIN
Sbjct: 301 KDDSFKTHPMNVLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELELEKFITHEVPFSEIN 360

Query: 354 KAFEYMVKGEGLRCIISM 371
           KAFEYM+ G GLRCII M
Sbjct: 361 KAFEYMLSGAGLRCIIRM 378

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118487636|gb|ABK95643.1| unknown [Populus trichocarpa]

 Score =  644 bits (1661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/378 (80%), Positives = 344/378 (91%), Gaps = 7/378 (1%)

Query: 1   MSSTA-------AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 53
           MSSTA       AAVAWEAGKPL+I++VEVAPPQAMEVR+KI +TSLC TD+YFWE+KGQ
Sbjct: 1   MSSTAGQVICCKAAVAWEAGKPLVIEEVEVAPPQAMEVRLKILFTSLCHTDVYFWEAKGQ 60

Query: 54  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 113
           TPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC+S+ SNMCDLLRIN
Sbjct: 61  TPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEESNMCDLLRIN 120

Query: 114 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 173
             RGVML DG+SRFSI G+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCG+
Sbjct: 121 TDRGVMLNDGKSRFSIRGQPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCVLSCGI 180

Query: 174 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 233
           STGLGATLNVAKP++GSSVA+FGLGAVGLAAAEGARIAGASRIIGVD +S RF+EAKKFG
Sbjct: 181 STGLGATLNVAKPKKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNSNRFDEAKKFG 240

Query: 234 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 293
           VT+FVN  +H++P+QEVIAEMTNGGVDRSVECTG+++ MISAFECVHDGWGVAVLVGVP+
Sbjct: 241 VTEFVNPKDHNKPVQEVIAEMTNGGVDRSVECTGSVNAMISAFECVHDGWGVAVLVGVPN 300

Query: 294 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 353
           KD  F T P+NVLNERTLKGTFFGNYKPR+DLPSVV+ YMNK+LELEKFITH +PFSEIN
Sbjct: 301 KDDSFKTHPMNVLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELELEKFITHEVPFSEIN 360

Query: 354 KAFEYMVKGEGLRCIISM 371
           KAFEYM+ G GLRCII M
Sbjct: 361 KAFEYMLSGAGLRCIIRM 378

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224093370|ref|XP_002309900.1| predicted protein [Populus trichocarpa] gi|222852803|gb|EEE90350.1| predicted protein [Populus trichocarpa]

 Score =  643 bits (1659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/378 (80%), Positives = 344/378 (91%), Gaps = 7/378 (1%)

Query: 1   MSSTA-------AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 53
           MSSTA       AAVAWEAGKPL+I++VEVAPPQAMEVR+KI +TSLC TD+YFWE+KGQ
Sbjct: 1   MSSTAGQVICCKAAVAWEAGKPLVIEEVEVAPPQAMEVRLKILFTSLCHTDVYFWEAKGQ 60

Query: 54  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 113
           TPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC+S+ SNMCDLLRIN
Sbjct: 61  TPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEESNMCDLLRIN 120

Query: 114 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 173
             RGVML DG+SRFSI G+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCG+
Sbjct: 121 TDRGVMLNDGKSRFSIRGQPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCVLSCGI 180

Query: 174 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 233
           STGLGATLNVAKP++GSS+A+FGLGAVGLAAAEGARIAGASRIIGVD +S RF+EAKKFG
Sbjct: 181 STGLGATLNVAKPKKGSSIAIFGLGAVGLAAAEGARIAGASRIIGVDLNSNRFDEAKKFG 240

Query: 234 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 293
           VT+FVN  +H++P+QEVIAEMTNGGVDRSVECTG+++ MISAFECVHDGWGVAVLVGVP+
Sbjct: 241 VTEFVNPKDHNKPVQEVIAEMTNGGVDRSVECTGSVNAMISAFECVHDGWGVAVLVGVPN 300

Query: 294 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 353
           KD  F T P+NVLNERTLKGTFFGNYKPR+DLPSVV+ YMNK+LELEKFITH +PFSEIN
Sbjct: 301 KDDSFKTHPMNVLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELELEKFITHEVPFSEIN 360

Query: 354 KAFEYMVKGEGLRCIISM 371
           KAFEYM+ G GLRCII M
Sbjct: 361 KAFEYMLSGAGLRCIIRM 378

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359477028|ref|XP_002281349.2| PREDICTED: alcohol dehydrogenase 1 [Vitis vinifera]

 Score =  641 bits (1654), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 296/367 (80%), Positives = 339/367 (92%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAVAWEAGKPL+I++VEVAPPQ MEVR+KI +TSLC TD+YFWE+KGQTPLFPRIFGHEA
Sbjct: 48  AAVAWEAGKPLVIEEVEVAPPQVMEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEA 107

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
            G+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC+S+ SNMCDLLRIN  RGVML+D +S
Sbjct: 108 GGIVESVGEGVTDLQSGDHVLPVFTGECKECRHCKSEESNMCDLLRINTDRGVMLSDNKS 167

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RFSING+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCG+STGLGATLNVAK
Sbjct: 168 RFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCVLSCGISTGLGATLNVAK 227

Query: 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
           P +GSSVA+FGLGAVGLAAAEGARIAGASRIIG+D + KRF +AKKFGVT+FVN  +HD+
Sbjct: 228 PWKGSSVAIFGLGAVGLAAAEGARIAGASRIIGIDLNPKRFNDAKKFGVTEFVNPKDHDK 287

Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           P+QEVIAEMT+GGVDRSVECTGN++ MISAFECVHDGWGVAVLVGVP+KD  F T P+N+
Sbjct: 288 PVQEVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPNKDDSFKTHPVNL 347

Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           LNERTLKGTFFGNYKPR+DLPSVV+ YMNK+LELEKFITH +PF+EINKAFEYM+ G+GL
Sbjct: 348 LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELELEKFITHEVPFAEINKAFEYMLSGDGL 407

Query: 366 RCIISME 372
           RCII M+
Sbjct: 408 RCIIRMD 414

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|342851389|gb|AEL75211.1| alcohol dehydrogenase [Pyrus communis]

 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/380 (79%), Positives = 344/380 (90%), Gaps = 7/380 (1%)

Query: 1   MSSTA-------AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 53
           MS+TA       AAVAWEAGKPL+I++VEVAPPQA EVRIKI +TSLC TD+YFWE+KGQ
Sbjct: 1   MSNTAGQVIRCRAAVAWEAGKPLVIEEVEVAPPQANEVRIKILFTSLCHTDVYFWEAKGQ 60

Query: 54  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 113
            PLFPRI+GHEA G+VESVGEGV DL+ GDHVLPVFTGEC DC HC+S+ SNMCDLLRIN
Sbjct: 61  NPLFPRIYGHEAGGIVESVGEGVMDLKAGDHVLPVFTGECKDCAHCKSEESNMCDLLRIN 120

Query: 114 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 173
             RGVML+DG+SRFSI G+P+ HF+GTSTFSEYTVVH GC+AKINPLAPLDKVC+LSCG+
Sbjct: 121 TDRGVMLSDGKSRFSIKGKPIYHFVGTSTFSEYTVVHVGCLAKINPLAPLDKVCLLSCGI 180

Query: 174 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 233
           STGL ATLNVAKP++GS+VAVFGLGAVGLAAAEGAR++GASRIIGVD  S RFEEAKKFG
Sbjct: 181 STGLEATLNVAKPKKGSTVAVFGLGAVGLAAAEGARLSGASRIIGVDLHSGRFEEAKKFG 240

Query: 234 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 293
           VT+FVN  EH +P+QEVIAE+TNGGVDRS+ECTG+++ MISAFECVHDGWGVAVLVGVP 
Sbjct: 241 VTEFVNPKEHKKPVQEVIAELTNGGVDRSIECTGSVEAMISAFECVHDGWGVAVLVGVPH 300

Query: 294 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 353
           K+AVF T P+N LNERTLKGTFFGNYKPRTD+PSVV+ YMNK+L+LEKFITH++PFSEIN
Sbjct: 301 KEAVFKTHPVNFLNERTLKGTFFGNYKPRTDIPSVVEKYMNKELQLEKFITHKVPFSEIN 360

Query: 354 KAFEYMVKGEGLRCIISMED 373
           KAFEYM+KGEGLRCII ME+
Sbjct: 361 KAFEYMLKGEGLRCIIHMEE 380

Source: Pyrus communis

Species: Pyrus communis

Genus: Pyrus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508983|ref|XP_003523232.1| PREDICTED: alcohol dehydrogenase-like [Glycine max]

 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/368 (81%), Positives = 338/368 (91%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAVAWEAGKPL+I++VEVAPPQA EVRIKI +TSLC TD+YFWE+KGQTPLFPRIFGHEA
Sbjct: 14  AAVAWEAGKPLVIEEVEVAPPQANEVRIKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEA 73

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
            G+VESVGEGV+DL+ GDHVLPVFTGEC +C HC+S+ SNMCDLLRIN  RGVML DG++
Sbjct: 74  GGIVESVGEGVTDLKPGDHVLPVFTGECKECDHCKSEESNMCDLLRINTDRGVMLNDGKA 133

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RFSING+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCG+STGLGATLNVAK
Sbjct: 134 RFSINGQPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCVLSCGISTGLGATLNVAK 193

Query: 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
           P +GSSVAVFGLGAVGLAAAEGAR+AGASRIIGVD +SKRF EAKKFGVT+FVN  ++D+
Sbjct: 194 PNKGSSVAVFGLGAVGLAAAEGARLAGASRIIGVDLNSKRFTEAKKFGVTEFVNPKDYDK 253

Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           P+QEVIAEMT GGVDRSVECTG+I+ MISAFECVHDGWGVAVLVGVP+KD  F T PINV
Sbjct: 254 PVQEVIAEMTGGGVDRSVECTGSINAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPINV 313

Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           LNE+TLKGTFFGNYKPR+DLPSVV+MYMNK+LELEKFITH +PF EINKAFEYM+KGE L
Sbjct: 314 LNEKTLKGTFFGNYKPRSDLPSVVEMYMNKELELEKFITHEVPFEEINKAFEYMLKGESL 373

Query: 366 RCIISMED 373
           RCII M +
Sbjct: 374 RCIIRMTE 381

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431501|ref|XP_002281334.1| PREDICTED: alcohol dehydrogenase 1 [Vitis vinifera] gi|296088563|emb|CBI37554.3| unnamed protein product [Vitis vinifera]

 Score =  640 bits (1652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/378 (79%), Positives = 343/378 (90%), Gaps = 7/378 (1%)

Query: 1   MSSTA-------AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 53
           MSSTA       AAVAWEAGKPL+I++VEVAPPQ MEVR+KI +TSLC TD+YFWE+KGQ
Sbjct: 1   MSSTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQVMEVRLKILFTSLCHTDVYFWEAKGQ 60

Query: 54  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 113
           TPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC+S+ SNMCDLLRIN
Sbjct: 61  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECRHCKSEESNMCDLLRIN 120

Query: 114 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 173
             RGVML+D +SRFSING+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCG+
Sbjct: 121 TDRGVMLSDNKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCVLSCGI 180

Query: 174 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 233
           STGLGATLNVAKP +GSSVA+FGLGAVGLAAAEGARIAGASRIIG+D + KRF +AKKFG
Sbjct: 181 STGLGATLNVAKPWKGSSVAIFGLGAVGLAAAEGARIAGASRIIGIDLNPKRFNDAKKFG 240

Query: 234 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 293
           VT+FVN  +HD+P+QEVIAEMT+GGVDRSVECTGN++ MISAFECVHDGWGVAVLVGVP+
Sbjct: 241 VTEFVNPKDHDKPVQEVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPN 300

Query: 294 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 353
           KD  F T P+N+LNERTLKGTFFGNYKPR+DLPSVV+ YMNK+LELEKFITH +PF+EIN
Sbjct: 301 KDDSFKTHPVNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELELEKFITHEVPFAEIN 360

Query: 354 KAFEYMVKGEGLRCIISM 371
           KAFEYM+ G+GLRCII M
Sbjct: 361 KAFEYMLSGDGLRCIIRM 378

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|295148815|gb|ADF80905.1| alcohol dehydrogenase I [Vitis aestivalis]

 Score =  640 bits (1651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/379 (79%), Positives = 343/379 (90%), Gaps = 7/379 (1%)

Query: 1   MSSTA-------AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 53
           MS TA       AAVAWEAGKPL+I++VEVAPPQAMEVR+KI YTSLC TD+YFWE+KGQ
Sbjct: 1   MSGTAGQVICCKAAVAWEAGKPLVIEEVEVAPPQAMEVRLKILYTSLCHTDVYFWEAKGQ 60

Query: 54  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 113
           TPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLP+FTGEC DC HC+S+ SN+CDLLRIN
Sbjct: 61  TPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPIFTGECKDCAHCKSEESNLCDLLRIN 120

Query: 114 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 173
             RGVM+ DG+SRF+I G+P+ HFLGTSTFSEYTVVH GCVAKINPLAPLDKVC+LSCG+
Sbjct: 121 TDRGVMIHDGKSRFTIKGKPIYHFLGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGI 180

Query: 174 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 233
           STGLGATLNVAKP +GS+VAVFGLGAVGLAAAEGARIAGASRIIGVD + KR+EEAKKFG
Sbjct: 181 STGLGATLNVAKPTKGSTVAVFGLGAVGLAAAEGARIAGASRIIGVDLNPKRYEEAKKFG 240

Query: 234 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 293
           VTDFVN  +H++ +QEVI EMT GGVDRS+ECTGN++ MISAFECVHDGWGVAV+VGVP+
Sbjct: 241 VTDFVNPKDHEKSVQEVIVEMTGGGVDRSLECTGNVNAMISAFECVHDGWGVAVIVGVPN 300

Query: 294 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 353
           KD VF T PIN+LNERTLKGTFFGNYKPR+D+P+VV+ YMNK+LE+EKFITH +PFSEIN
Sbjct: 301 KDDVFKTHPINLLNERTLKGTFFGNYKPRSDIPAVVEKYMNKELEVEKFITHSVPFSEIN 360

Query: 354 KAFEYMVKGEGLRCIISME 372
           KAFEYM+KGEGLRCII ME
Sbjct: 361 KAFEYMLKGEGLRCIIHME 379

Source: Vitis aestivalis

Species: Vitis aestivalis

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088562|emb|CBI37553.3| unnamed protein product [Vitis vinifera]

 Score =  639 bits (1649), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 296/367 (80%), Positives = 339/367 (92%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAVAWEAGKPL+I++VEVAPPQ MEVR+KI +TSLC TD+YFWE+KGQTPLFPRIFGHEA
Sbjct: 13  AAVAWEAGKPLVIEEVEVAPPQVMEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEA 72

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
            G+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC+S+ SNMCDLLRIN  RGVML+D +S
Sbjct: 73  GGIVESVGEGVTDLQSGDHVLPVFTGECKECRHCKSEESNMCDLLRINTDRGVMLSDNKS 132

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RFSING+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCG+STGLGATLNVAK
Sbjct: 133 RFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCVLSCGISTGLGATLNVAK 192

Query: 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
           P +GSSVA+FGLGAVGLAAAEGARIAGASRIIG+D + KRF +AKKFGVT+FVN  +HD+
Sbjct: 193 PWKGSSVAIFGLGAVGLAAAEGARIAGASRIIGIDLNPKRFNDAKKFGVTEFVNPKDHDK 252

Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           P+QEVIAEMT+GGVDRSVECTGN++ MISAFECVHDGWGVAVLVGVP+KD  F T P+N+
Sbjct: 253 PVQEVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPNKDDSFKTHPVNL 312

Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           LNERTLKGTFFGNYKPR+DLPSVV+ YMNK+LELEKFITH +PF+EINKAFEYM+ G+GL
Sbjct: 313 LNERTLKGTFFGNYKPRSDLPSVVEKYMNKELELEKFITHEVPFAEINKAFEYMLSGDGL 372

Query: 366 RCIISME 372
           RCII M+
Sbjct: 373 RCIIRMD 379

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255587152|ref|XP_002534157.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223525768|gb|EEF28223.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  639 bits (1649), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/368 (81%), Positives = 338/368 (91%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAVAWEAGKPL+I++VEVAPPQA EVR+KI +TSLC TD+YFWE+KGQ PLFPRI+GHEA
Sbjct: 13  AAVAWEAGKPLLIEEVEVAPPQANEVRLKILFTSLCHTDVYFWEAKGQNPLFPRIYGHEA 72

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
            G+VESVGEGV+DL+ GDHVLPVFTGEC +C HC+S+ SNMC LLRIN  RGVML DG S
Sbjct: 73  GGIVESVGEGVTDLKPGDHVLPVFTGECKECAHCKSEESNMCSLLRINTDRGVMLNDGNS 132

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RFSING+P+ HF+GTSTFSEYTVVH GC+AKINPLAPLDKVC+LSCG+STGLGATLNVAK
Sbjct: 133 RFSINGKPIYHFVGTSTFSEYTVVHVGCLAKINPLAPLDKVCVLSCGISTGLGATLNVAK 192

Query: 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
           P +GSSV VFGLGAVGLAAAEGARIAGASRIIGVD +S RFEEAKKFGVT+FVN  ++ +
Sbjct: 193 PAKGSSVVVFGLGAVGLAAAEGARIAGASRIIGVDVNSSRFEEAKKFGVTEFVNPKDYKK 252

Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           P+QEVIAEMT+GGVDRSVECTGNID MISAFECVHDGWGVAVLVGVP KDAVF T P+N+
Sbjct: 253 PVQEVIAEMTDGGVDRSVECTGNIDAMISAFECVHDGWGVAVLVGVPHKDAVFRTHPVNL 312

Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           LNERTLKGTFFGNYKPR+DLPSVV+ YM+K+LELEKFITH +PFSEINKAFEYM+KGEGL
Sbjct: 313 LNERTLKGTFFGNYKPRSDLPSVVEKYMSKELELEKFITHSVPFSEINKAFEYMLKGEGL 372

Query: 366 RCIISMED 373
           RCII ME+
Sbjct: 373 RCIIRMEE 380

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	373
TAIR|locus:2025237	379	ADH1 "alcohol dehydrogenase 1"	0.981	0.965	0.680	9.5e-137
TAIR|locus:2184575	381	AT5G24760 [Arabidopsis thalian	0.967	0.947	0.463	4.7e-87
ZFIN|ZDB-GENE-011003-1	376	adh5 "alcohol dehydrogenase 5"	0.973	0.965	0.420	3.7e-80
UNIPROTKB|F1S0C1	374	ADH5 "Uncharacterized protein"	0.978	0.975	0.423	2e-79
UNIPROTKB|P11766	374	ADH5 "Alcohol dehydrogenase cl	0.978	0.975	0.423	2.6e-79
UNIPROTKB|Q3ZC42	374	ADH5 "Alcohol dehydrogenase cl	0.978	0.975	0.415	1.4e-78
RGD|2292706	374	Adh5 "alcohol dehydrogenase 5	0.978	0.975	0.420	1.8e-78
UNIPROTKB|P12711	374	Adh5 "Alcohol dehydrogenase cl	0.978	0.975	0.420	1.8e-78
UNIPROTKB|F1NKS5	374	ADH5 "Uncharacterized protein"	0.973	0.970	0.409	1.3e-77
UNIPROTKB|F1PLM5	376	F1PLM5 "Uncharacterized protei	0.978	0.970	0.409	2.1e-77

TAIR|locus:2025237 ADH1 "alcohol dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1339 (476.4 bits), Expect = 9.5e-137, P = 9.5e-137
 Identities = 249/366 (68%), Positives = 287/366 (78%)

Query:     6 AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
             AAVAWEAGKPL+I++VEVAPPQ  EVRIKI +TSLC TD+YFWE+KGQTPLFPRIFGH  
Sbjct:    12 AAVAWEAGKPLVIEEVEVAPPQKHEVRIKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEA 71

Query:    66 XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                               HVLP+FTGECG+CRHC S+ SNMCDLLRIN  RG M+ DG+S
Sbjct:    72 GGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLLRINTERGGMIHDGES 131

Query:   126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
             RFSING+P+ HFLGTSTFSEYTVVHSG VAKINP APLDKVCI+SCG+STGLGATLNVAK
Sbjct:   132 RFSINGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLSTGLGATLNVAK 191

Query:   186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
             P++                              VD +SKRF++AK+FGVT+ VN  +HD+
Sbjct:   192 PKKGQSVAIFGLGAVGLGAAEGARIAGASRIIGVDFNSKRFDQAKEFGVTECVNPKDHDK 251

Query:   246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
             PIQ+VIAEMT+GGVDRSVECTG++  MI AFECVHDGWGVAVLVGVPSKD  F T P+N 
Sbjct:   252 PIQQVIAEMTDGGVDRSVECTGSVQAMIQAFECVHDGWGVAVLVGVPSKDDAFKTHPMNF 311

Query:   306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
             LNERTLKGTFFGNYKP+TD+P VV+ YMNK+LELEKFITH +PFSEINKAF+YM+KGE +
Sbjct:   312 LNERTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKFITHTVPFSEINKAFDYMLKGESI 371

Query:   366 RCIISM 371
             RCII+M
Sbjct:   372 RCIITM 377

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0045333 "cellular respiration" evidence=TAS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006970 "response to osmotic stress" evidence=IGI

GO:0001666 "response to hypoxia" evidence=IEP;RCA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS;IMP

TAIR|locus:2184575 AT5G24760 [Arabidopsis thaliana (taxid:3702)]

 Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
 Identities = 170/367 (46%), Positives = 231/367 (62%)

Query:     6 AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
             AAVAW AG+PL++++VEV+PPQ +E+RIK+  TSLCR+DL  WES+    L PRIFGH  
Sbjct:    18 AAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWESQS---LLPRIFGHEA 74

Query:    66 XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                               HVL VFTGECG CRHC S  SNMC +L +   +G+M +D ++
Sbjct:    75 AGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLGMER-KGLMHSDQKT 133

Query:   126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
             RFSI G+PV H+   S+FSEYTVVHSGC  K++PLAPL K+C+LSCGV+ GLGA  NVA 
Sbjct:   134 RFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVAD 193

Query:   186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
              ++                              VD +  + E+AK FGVTDF+N+++   
Sbjct:   194 VQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAKTFGVTDFINSNDLSE 253

Query:   246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP-SKDAVFMTKPIN 304
             PI +VI  MT GG D S EC G+     +A +   DGWG+ V +GVP +K  V     + 
Sbjct:   254 PIPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLGVPKAKPEVSAHYGL- 312

Query:   305 VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG 364
              L+ ++LKGT FG +KP++DLPS++D YMNK++ +++FITH + F EINKAF  M +G+ 
Sbjct:   313 FLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSFDEINKAFVLMREGKC 372

Query:   365 LRCIISM 371
             LRC++ M
Sbjct:   373 LRCVLHM 379

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

ZFIN|ZDB-GENE-011003-1 adh5 "alcohol dehydrogenase 5" [Danio rerio (taxid:7955)]

 Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
 Identities = 153/364 (42%), Positives = 217/364 (59%)

Query:     6 AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
             AAVAWEAGKPL I++VEVAPP+A EVR+KI  T +C TD Y         LFP I GH  
Sbjct:    12 AAVAWEAGKPLTIEEVEVAPPKAHEVRVKIHATGVCHTDAYTLSGSDPEGLFPVILGHEG 71

Query:    66 XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                                V+P++  +CG+C+ C++  +N+C  +R+   +G+M  D  S
Sbjct:    72 AGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQGQGLM-PDNTS 130

Query:   126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
             RF+  G+ + HF+GTSTFSEYTVV    +AK++  APLDKVC+L CG+STG GA +N AK
Sbjct:   131 RFTCKGKQLFHFMGTSTFSEYTVVAEISLAKVDEHAPLDKVCLLGCGISTGYGAAINTAK 190

Query:   186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
              E                               +D +  +FE AKKFG T+FVN  +H +
Sbjct:   191 VEAGSTCAVFGLGAVGLAVVMGCKSAGATRIIGIDVNPDKFEIAKKFGATEFVNPKDHSK 250

Query:   246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
             PIQEV+ E+T+GGVD S EC GN+  M +A E  H GWG +V++GV        T+P  +
Sbjct:   251 PIQEVLVELTDGGVDYSFECIGNVGIMRAALEACHKGWGTSVIIGVAGAGQEISTRPFQL 310

Query:   306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
             +  RT KGT FG +K    +P +V+ YMNK+L +++F+TH +PF++IN+AF+ M  G+ +
Sbjct:   311 VTGRTWKGTAFGGWKSVESVPKLVNDYMNKKLMVDEFVTHTLPFAQINEAFDLMHAGKSI 370

Query:   366 RCII 369
             R ++
Sbjct:   371 RAVL 374

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1S0C1 ADH5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
 Identities = 155/366 (42%), Positives = 218/366 (59%)

Query:     6 AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
             AAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y          FP I GH  
Sbjct:    10 AAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPVILGHEG 69

Query:    66 XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                                V+P++  +CG+C+ C +  +N+C  +R+   +G+M  DG S
Sbjct:    70 AGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTS 128

Query:   126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
             RF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CGVSTG GA +N AK
Sbjct:   129 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAAVNTAK 188

Query:   186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
              E                               VD +  +F  AK+FG ++ +N  +  +
Sbjct:   189 VEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGASECINPQDFSK 248

Query:   246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
             PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +      T+P  +
Sbjct:   249 PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQL 308

Query:   306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
             +  RT KGT FG +K    +P +V  YM+K++++++F+TH +PF +IN+AFE M  G+ +
Sbjct:   309 VTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFELMHAGKSI 368

Query:   366 RCIISM 371
             R +I +
Sbjct:   369 RTVIKL 374

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0051775 "response to redox state" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|P11766 ADH5 "Alcohol dehydrogenase class-3" [Homo sapiens (taxid:9606)]

 Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
 Identities = 155/366 (42%), Positives = 217/366 (59%)

Query:     6 AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
             AAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y          FP I GH  
Sbjct:    10 AAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEG 69

Query:    66 XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                                V+P++  +CG+C+ C +  +N+C  +R+   +G+M  DG S
Sbjct:    70 AGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTS 128

Query:   126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
             RF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG GA +N AK
Sbjct:   129 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAK 188

Query:   186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
              E                               VD +  +F  AK+FG T+ +N  +  +
Sbjct:   189 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSK 248

Query:   246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
             PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +      T+P  +
Sbjct:   249 PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQL 308

Query:   306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
             +  RT KGT FG +K    +P +V  YM+K++++++F+TH + F EINKAFE M  G+ +
Sbjct:   309 VTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSI 368

Query:   366 RCIISM 371
             R ++ +
Sbjct:   369 RTVVKI 374

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0007568 "aging" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0009055 "electron carrier activity" evidence=TAS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0005504 "fatty acid binding" evidence=IDA

GO:0051775 "response to redox state" evidence=IDA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IDA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=TAS

UNIPROTKB|Q3ZC42 ADH5 "Alcohol dehydrogenase class-3" [Bos taurus (taxid:9913)]

 Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
 Identities = 152/366 (41%), Positives = 218/366 (59%)

Query:     6 AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
             AAVAWEAGKPL I++VEVAPP+A EVRIKI  T++C TD Y          +P I GH  
Sbjct:    10 AAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGNYPVILGHEG 69

Query:    66 XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                                V+P++  +CG+C+ C +  +N+C  +R+   +G+M  DG S
Sbjct:    70 AGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTS 128

Query:   126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
             RF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG GA LN AK
Sbjct:   129 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAALNAAK 188

Query:   186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
              E                               VD +  +F  AK+FG ++ +N  +  +
Sbjct:   189 VEPGSTCAVFGLGGVGLAVIMGCKMAGAARIIGVDINKDKFARAKEFGASECINPQDFSK 248

Query:   246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
             PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWG++V+VGV +      T+P  +
Sbjct:   249 PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGISVVVGVAASGEEIATRPFQL 308

Query:   306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
             +  RT KGT FG +K    +P +V  YM+K++++++F+TH +PF +IN+AF+ M  G+ +
Sbjct:   309 VTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHSLPFDQINEAFDLMHAGKSI 368

Query:   366 RCIISM 371
             R ++ +
Sbjct:   369 RTVVKL 374

GO:0051775 "response to redox state" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

RGD|2292706 Adh5 "alcohol dehydrogenase 5 (class III), chi polypeptide" [Rattus norvegicus (taxid:10116)]

 Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
 Identities = 154/366 (42%), Positives = 215/366 (58%)

Query:     6 AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
             AAVAWEAGKPL I+++EVAPPQA EVRIKI  T++C TD Y          FP I GH  
Sbjct:    10 AAVAWEAGKPLSIEEIEVAPPQAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEG 69

Query:    66 XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                                V+P++  +CG+C+ C +  +N+C  +R+   +G+M  DG S
Sbjct:    70 AGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTS 128

Query:   126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
             RF+  G+P+ HF+GTSTFSEYTVV    VAKI+P APLDKVC+L CG+STG GA +N AK
Sbjct:   129 RFTCKGKPILHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTAK 188

Query:   186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
              E                               +D +  +F +AK+FG T+ +N  +  +
Sbjct:   189 VEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGATECINPQDFSK 248

Query:   246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
              IQEV+ EMT+GGVD S EC GN+  M SA E  H GWGV+V+VGV +      T+P  +
Sbjct:   249 SIQEVLIEMTDGGVDFSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPFQL 308

Query:   306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
             +  RT KGT FG +K    +P +V  YM+K++++++F+T  + F +INKAF+ M  G  +
Sbjct:   309 VTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINKAFDLMHSGNSI 368

Query:   366 RCIISM 371
             R ++ M
Sbjct:   369 RTVLKM 374

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA;ISO

GO:0003016 "respiratory system process" evidence=IEA;ISO

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA;ISO;IDA

GO:0005504 "fatty acid binding" evidence=IEA;ISO

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0006068 "ethanol catabolic process" evidence=IDA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0007568 "aging" evidence=IEP

GO:0008270 "zinc ion binding" evidence=IEA;ISO

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA;ISO

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA;ISO

GO:0032496 "response to lipopolysaccharide" evidence=IEA;ISO

GO:0042803 "protein homodimerization activity" evidence=IEA;ISO

GO:0045777 "positive regulation of blood pressure" evidence=IEA;ISO

GO:0046294 "formaldehyde catabolic process" evidence=IEA;ISO

GO:0051409 "response to nitrosative stress" evidence=IEA;ISO

GO:0051775 "response to redox state" evidence=IEA;ISO

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA;ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

UNIPROTKB|P12711 Adh5 "Alcohol dehydrogenase class-3" [Rattus norvegicus (taxid:10116)]

 Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
 Identities = 154/366 (42%), Positives = 215/366 (58%)

Query:     6 AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
             AAVAWEAGKPL I+++EVAPPQA EVRIKI  T++C TD Y          FP I GH  
Sbjct:    10 AAVAWEAGKPLSIEEIEVAPPQAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEG 69

Query:    66 XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                                V+P++  +CG+C+ C +  +N+C  +R+   +G+M  DG S
Sbjct:    70 AGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTS 128

Query:   126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
             RF+  G+P+ HF+GTSTFSEYTVV    VAKI+P APLDKVC+L CG+STG GA +N AK
Sbjct:   129 RFTCKGKPILHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTAK 188

Query:   186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
              E                               +D +  +F +AK+FG T+ +N  +  +
Sbjct:   189 VEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGATECINPQDFSK 248

Query:   246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
              IQEV+ EMT+GGVD S EC GN+  M SA E  H GWGV+V+VGV +      T+P  +
Sbjct:   249 SIQEVLIEMTDGGVDFSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPFQL 308

Query:   306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
             +  RT KGT FG +K    +P +V  YM+K++++++F+T  + F +INKAF+ M  G  +
Sbjct:   309 VTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINKAFDLMHSGNSI 368

Query:   366 RCIISM 371
             R ++ M
Sbjct:   369 RTVLKM 374

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0051775 "response to redox state" evidence=IEA

UNIPROTKB|F1NKS5 ADH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
 Identities = 149/364 (40%), Positives = 217/364 (59%)

Query:     6 AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
             AAVAWEAGKPL I++VEVAPP+A EVRIKI  T+LC TD Y          FP I GH  
Sbjct:    10 AAVAWEAGKPLSIEEVEVAPPKAHEVRIKIVATALCHTDAYTLSGADPEGCFPVILGHEG 69

Query:    66 XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                                V+P++  +CG+C++C++  +N+C  +R+   +G+M  DG  
Sbjct:    70 AGIVESVGEGVTKVKPGDTVIPLYIPQCGECKYCKNPKTNLCQKIRVTQGKGLM-PDGTI 128

Query:   126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
             RF+  G+ + HF+GTSTFSEYTVV    VAKI+P AP DKVC+L CG+STG GA +N AK
Sbjct:   129 RFTCKGKQIYHFMGTSTFSEYTVVADISVAKIDPAAPFDKVCLLGCGISTGYGAAVNTAK 188

Query:   186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
              E                               +D +   + +AK+FG  + ++  + ++
Sbjct:   189 VEPGSTCAVFGLGGVGLATVMGCKAAGASRIIGIDINKNTYAKAKEFGAAECISPQDFEK 248

Query:   246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
             PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +      T+P  +
Sbjct:   249 PIQEVLVEMTDGGVDYSFECIGNVGVMRAALEACHKGWGVSVIVGVAAAGQEISTRPFQL 308

Query:   306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
             +  RT KGT FG +K    +P +V+ YM K++++++F+TH +PF +IN+AF+ + KG+ +
Sbjct:   309 VTGRTWKGTAFGGWKSVDSVPKLVNDYMAKKIKVDEFVTHTLPFDKINEAFDLLHKGKSI 368

Query:   366 RCII 369
             R ++
Sbjct:   369 RTVL 372

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0051775 "response to redox state" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

UNIPROTKB|F1PLM5 F1PLM5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
 Identities = 150/366 (40%), Positives = 216/366 (59%)

Query:     6 AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
             AAVAWEAGKPL I++VEVAPP+A EVRIKI  T++C TD Y          FP I GH  
Sbjct:    12 AAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPVILGHEG 71

Query:    66 XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                                V+P++  +CG+C+ C +  +N+C  +R+   +G+M  DG S
Sbjct:    72 AGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTS 130

Query:   126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
             RF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG GA LN AK
Sbjct:   131 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAALNTAK 190

Query:   186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
              E                               VD +  +F  AK+FG ++ +N  +  +
Sbjct:   191 VEPGSTCAVFGLGGVGLATIMGCKVAGASRIIGVDINKDKFSRAKEFGASECINPQDFSK 250

Query:   246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
             PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +      T+P  +
Sbjct:   251 PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVIVGVAASGEEIATRPFQL 310

Query:   306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
             +  R  KGT FG +K    +P +V  YM++++++++F+TH + F +IN+AF+ +  G+ +
Sbjct:   311 VTGRVWKGTAFGGWKSVESVPKLVSEYMSRKIKVDEFVTHSLSFDQINEAFDLLHAGKSI 370

Query:   366 RCIISM 371
             R ++ +
Sbjct:   371 RTVVKL 376

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q2R8Z5	ADH1_ORYSJ	1, ., 1, ., 1, ., 1	0.7826	0.9865	0.9709	yes	no
P80467	ADHX_UROHA	1, ., 1, ., 1, ., 2, 8, 4	0.5136	0.9785	0.9785	N/A	no
O19053	ADHX_RABIT	1, ., 1, ., 1, ., 2, 8, 4	0.5081	0.9785	0.9759	yes	no
P06525	ADH1_ARATH	1, ., 1, ., 1, ., 1	0.7950	0.9812	0.9656	yes	no
P19854	ADHX_HORSE	1, ., 1, ., 1, ., 2, 8, 4	0.5109	0.9785	0.9759	yes	no
P14674	ADH2_SOLTU	1, ., 1, ., 1, ., 1	0.8016	0.9865	0.9684	N/A	no
P14675	ADH3_SOLTU	1, ., 1, ., 1, ., 1	0.8016	0.9865	0.9684	N/A	no
A2XAZ3	ADHX_ORYSI	1, ., 1, ., 1, ., 2, 8, 4	0.5640	0.9839	0.9632	N/A	no
P14673	ADH1_SOLTU	1, ., 1, ., 1, ., 1	0.8016	0.9865	0.9684	N/A	no
P12711	ADHX_RAT	1, ., 1, ., 1, ., 2, 8, 4	0.5163	0.9785	0.9759	yes	no
P86884	ADHX_SCYCA	1, ., 1, ., 1, ., 2, 8, 4	0.5054	0.9785	0.9707	N/A	no
P28032	ADH2_SOLLC	1, ., 1, ., 1, ., 1	0.7961	0.9865	0.9684	N/A	no
P93629	ADHX_MAIZE	1, ., 1, ., 1, ., 2, 8, 4	0.5585	0.9839	0.9632	N/A	no
P48977	ADH_MALDO	1, ., 1, ., 1, ., 1	0.7894	1.0	0.9815	N/A	no
P00333	ADH1_MAIZE	1, ., 1, ., 1, ., 1	0.7853	0.9865	0.9709	N/A	no
P00327	ADH1E_HORSE	1, ., 1, ., 1, ., 1	0.4808	0.9758	0.9706	yes	no
P80572	ADHX_PEA	1, ., 1, ., 1, ., 2, 8, 4	0.5543	0.9865	0.9735	N/A	no
Q4R1E8	ADH2_ORYSI	1, ., 1, ., 1, ., 1	0.7445	0.9865	0.9709	N/A	no
Q17335	ADHX_CAEEL	1, ., 1, ., 1, ., 2, 8, 4	0.4699	0.9946	0.9661	yes	no
Q3ZC42	ADHX_BOVIN	1, ., 1, ., 1, ., 2, 8, 4	0.5081	0.9785	0.9759	yes	no
P46415	ADHX_DROME	1, ., 1, ., 1, ., 2, 8, 4	0.4890	0.9731	0.9577	yes	no
P11766	ADHX_HUMAN	1, ., 1, ., 1, ., 2, 8, 4	0.5191	0.9785	0.9759	yes	no
P25141	ADH1_PETHY	1, ., 1, ., 1, ., 1	0.7826	0.9839	0.9607	N/A	no
P05336	ADH1_HORVU	1, ., 1, ., 1, ., 1	0.7635	0.9865	0.9709	N/A	no
P79896	ADHX_SPAAU	1, ., 1, ., 1, ., 2, 8, 4	0.5109	0.9785	0.9707	N/A	no
P81600	ADHH_GADMO	1, ., 1, ., 1, ., 2, 8, 4	0.5027	0.9785	0.9733	N/A	no
P12886	ADH1_PEA	1, ., 1, ., 1, ., 1	0.7934	0.9865	0.9684	N/A	no
P13603	ADH1_TRIRP	1, ., 1, ., 1, ., 1	0.7657	1.0	0.9815	N/A	no
P17648	ADH_FRAAN	1, ., 1, ., 1, ., 1	0.7853	0.9865	0.9684	N/A	no
P04707	ADH2_MAIZE	1, ., 1, ., 1, ., 1	0.7635	0.9865	0.9709	N/A	no
P14219	ADH1_PENAM	1, ., 1, ., 1, ., 1	0.7853	0.9865	0.9709	N/A	no
P28474	ADHX_MOUSE	1, ., 1, ., 1, ., 2, 8, 4	0.5054	0.9785	0.9759	yes	no
Q54TC2	ADHX_DICDI	1, ., 1, ., 1, ., 2, 8, 4	0.4796	0.9785	0.9630	yes	no
P26325	ADH1_GADMC	1, ., 1, ., 1, ., 1	0.5040	0.9785	0.9733	N/A	no
Q0ITW7	ADH2_ORYSJ	1, ., 1, ., 1, ., 1	0.7445	0.9865	0.9709	no	no
Q75ZX4	ADH1_ORYSI	1, ., 1, ., 1, ., 1	0.7826	0.9865	0.9709	N/A	no
P10847	ADH2_HORVU	1, ., 1, ., 1, ., 1	0.7255	0.9705	0.9705	N/A	no
Q07264	ADH1_ZEALU	1, ., 1, ., 1, ., 1	0.7773	0.7828	0.9965	N/A	no
P10848	ADH3_HORVU	1, ., 1, ., 1, ., 1	0.7685	0.9731	0.9577	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.983
4th Layer	1.1.1.1	0.979

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	373
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	0.0
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	0.0
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	0.0
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	1e-170
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	1e-167
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	1e-159
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	1e-157
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	1e-152
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	1e-148
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	1e-128
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	1e-101
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	2e-97
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	4e-88
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	1e-77
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	7e-73
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	3e-61
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	1e-58
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	2e-58
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	5e-55
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	3e-54
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	2e-53
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	5e-52
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	4e-51
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	2e-49
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	6e-49
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	5e-48
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	1e-47
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	7e-47
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	8e-47
cd05281	341	cd05281, TDH, Threonine dehydrogenase	2e-42
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	9e-42
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	3e-41
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	4e-41
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	9e-41
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	1e-39
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	4e-39
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	2e-37
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	8e-37
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	7e-35
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	4e-34
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	5e-34
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	2e-33
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	5e-32
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	3e-31
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	8e-31
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	1e-30
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	2e-29
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	2e-28
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	4e-28
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	6e-27
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	7e-27
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	3e-26
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	5e-25
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	9e-24
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	1e-23
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	2e-23
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	2e-23
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	4e-23
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	1e-21
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	1e-21
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	4e-21
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	2e-20
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	3e-20
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	1e-18
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	1e-18
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	1e-18
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	8e-17
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	2e-15
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	3e-15
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	5e-15
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	7e-15
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	9e-15
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	1e-14
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	4e-14
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	9e-14
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	1e-13
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	8e-13
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	2e-12
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	9e-12
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	3e-11
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	2e-10
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	1e-09
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	4e-09
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	8e-09
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	1e-08
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	2e-08
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	4e-08
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	1e-07
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	1e-07
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	2e-07
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	3e-07
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	6e-07
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	2e-06
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	2e-06
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	2e-06
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	3e-06
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	1e-05
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	1e-05
smart00829	287	smart00829, PKS_ER, Enoylreductase	1e-05
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	7e-05
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	3e-04
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	4e-04
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	0.001

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score =  715 bits (1848), Expect = 0.0
 Identities = 284/364 (78%), Positives = 326/364 (89%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAVAWEAGKPL+I++VEVAPPQAMEVRIKI +TSLC TD+YFWE+KGQTPLFPRI GHEA
Sbjct: 5   AAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEA 64

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
           AG+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC+S+ SNMCDLLRIN  RGVM+ DG+S
Sbjct: 65  AGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKS 124

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RFSING+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCGVSTGLGA  NVAK
Sbjct: 125 RFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAK 184

Query: 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
            ++GS+VA+FGLGAVGLA AEGARI GASRIIGVD +  +FE+AKKFGVT+FVN  +HD+
Sbjct: 185 VKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKDHDK 244

Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           P+QEVIAEMT GGVD S ECTGNID MISAFECVHDGWGV VL+GVP KDAVF T P+N+
Sbjct: 245 PVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNL 304

Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           LN RTLKGT FG YKP+TDLP++V+ YM K+LELEKFITH +PFSEINKAF+ ++KGE L
Sbjct: 305 LNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL 364

Query: 366 RCII 369
           RCI+
Sbjct: 365 RCIL 368

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  544 bits (1403), Expect = 0.0
 Identities = 205/368 (55%), Positives = 264/368 (71%), Gaps = 4/368 (1%)

Query: 3   STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFG 62
              AAVAWEAGKPL+I+++EVAPP+A EVRIK+  TS+C TD+   E    T  FP I G
Sbjct: 2   KCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKATL-FPVILG 60

Query: 63  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 122
           HE AG+VESVGEGV++L+ GD V+P+F G+CG+C +CRS  +N+C   R N     ++ D
Sbjct: 61  HEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANE--SGLMPD 118

Query: 123 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 182
           G SRF+  G+ + HFLGTSTFS+YTVV    VAKI+P APL+ VC+L CG STG GA  N
Sbjct: 119 GTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWN 178

Query: 183 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 242
            AK E GS+VAVFGLGAVGL+A  GA+IAGASRIIGVD +  +FE+AK+FG TDF+N  +
Sbjct: 179 TAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKD 238

Query: 243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP 302
            D+P+ EVI EMT GGVD S ECTGN D M  A E    GWGV+V+VGVP    +   +P
Sbjct: 239 SDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAEL-SIRP 297

Query: 303 INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG 362
             ++  RT KG+FFG +K R+D+P +V  YMNK+ +L++ ITH +PF EINK F+ M  G
Sbjct: 298 FQLILGRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSG 357

Query: 363 EGLRCIIS 370
           E +R +I+
Sbjct: 358 ECIRTVIT 365

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score =  522 bits (1346), Expect = 0.0
 Identities = 201/364 (55%), Positives = 264/364 (72%), Gaps = 1/364 (0%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAVAWEAGKPL I++VEVAPP+A EVRIKI  T +C TD Y         LFP I GHE 
Sbjct: 5   AAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEG 64

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
           AG+VESVGEGV+ ++ GDHV+P++T ECG+C+ C+S  +N+C  +R    +G+M  DG S
Sbjct: 65  AGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLM-PDGTS 123

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RFS  G+P+ HF+GTSTFSEYTVV    VAKINP APLDKVC+L CGV+TG GA LN AK
Sbjct: 124 RFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAK 183

Query: 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
            E GS+VAVFGLGAVGLA  +GA+ AGASRIIG+D +  +FE AKKFG TD VN  +HD+
Sbjct: 184 VEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDHDK 243

Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQ+V+ EMT+GGVD + EC GN+  M +A E  H GWG +V++GV +      T+P  +
Sbjct: 244 PIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQL 303

Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           +  R  KGT FG +K R+ +P +V+ YM  ++++++FITH +P  EIN+AF+ M  G+ +
Sbjct: 304 VTGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSI 363

Query: 366 RCII 369
           R ++
Sbjct: 364 RTVV 367

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score =  480 bits (1237), Expect = e-170
 Identities = 194/369 (52%), Positives = 269/369 (72%), Gaps = 7/369 (1%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPRIFG 62
           AAVAW  G+PL+++++ V PPQ MEVRIKI YTS+C TDL  W  KG+      +PRI G
Sbjct: 13  AAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAW--KGENEAQRAYPRILG 70

Query: 63  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 122
           HEAAG+VESVGEGV DL+ GDHV+P+F GECGDCR+C+ D +N+C+  R++P + VM+ D
Sbjct: 71  HEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVND 130

Query: 123 GQSRFSI--NGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT 180
           G++RFS   +G+P+ HFL TSTF+EYTV+ S CV KI+P APL K+ +LSCGVSTG+GA 
Sbjct: 131 GKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAA 190

Query: 181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 240
            N A  + GSSVA+FGLGAVGLA AEGAR  GAS+IIGVD + ++FE+ K+ G+TDF+N 
Sbjct: 191 WNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFINP 250

Query: 241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 300
            + D+P+ E I EMT GGVD S EC GN++ +  AF   HDGWG+ VL+G+     +   
Sbjct: 251 KDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPL 310

Query: 301 KPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMV 360
            P+ + + R++ G+ FG++K ++ LP++    M   + L+ FITH +PF +IN+AF+ + 
Sbjct: 311 HPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLE 370

Query: 361 KGEGLRCII 369
            G+ LRC++
Sbjct: 371 DGKALRCLL 379

Length = 381

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score =  472 bits (1216), Expect = e-167
 Identities = 207/366 (56%), Positives = 272/366 (74%), Gaps = 4/366 (1%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAVAW AG+ L++++VEV+PPQ +E+RIK+  TSLCR+DL  WES+    LFPRIFGHEA
Sbjct: 15  AAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ---ALFPRIFGHEA 71

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
           +G+VES+GEGV++ E GDHVL VFTGECG CRHC S  SNMC +L +   +GVM +D ++
Sbjct: 72  SGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLER-KGVMHSDQKT 130

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RFSI G+PV H+   S+FSEYTVVHSGC  K++PLAPL K+C+LSCGV+ GLGA  NVA 
Sbjct: 131 RFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVAD 190

Query: 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
             +GSSV +FGLG VGL+ A+GA++ GAS+IIGVD + ++ E+AK FGVTDF+N ++   
Sbjct: 191 VSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPNDLSE 250

Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQ+VI  MT GG D S EC G+     +A +   DGWG+ V +GVP             
Sbjct: 251 PIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLF 310

Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           L+ RTLKG+ FG +KP++DLPS+VD YMNK++ +++FITH + F EINKAFE M +G+ L
Sbjct: 311 LSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCL 370

Query: 366 RCIISM 371
           RC+I M
Sbjct: 371 RCVIHM 376

Length = 378

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score =  451 bits (1162), Expect = e-159
 Identities = 180/366 (49%), Positives = 246/366 (67%), Gaps = 2/366 (0%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAV WE  KP  I+++EVAPP+A EVRIKI  T +CR+D +    K  TP FP I GHEA
Sbjct: 10  AAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLVTP-FPVILGHEA 68

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
           AG+VESVGEGV+ ++ GD V+P+F  +CG CR C +  SN+C    +   +G+M  DG S
Sbjct: 69  AGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLM-QDGTS 127

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+P++HFLGTSTFSEYTVV    VAKI+  APL+KVC++ CG STG GA +N AK
Sbjct: 128 RFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAK 187

Query: 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
              GS+ AVFGLG VGL+A  G + AGASRII VD +  +F +AK+ G T+ +N  ++ +
Sbjct: 188 VTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQDYKK 247

Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEV+ EMT+GGVD S E  G +D M +A    H+G+GV+V+VGVP         P+ +
Sbjct: 248 PIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLL 307

Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           L  RT KG  FG +K +  +P +V  YM K+  L+  ITH +PF +IN+ F+ +  G+ +
Sbjct: 308 LTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSI 367

Query: 366 RCIISM 371
           R +++ 
Sbjct: 368 RTVLTF 373

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  446 bits (1149), Expect = e-157
 Identities = 177/368 (48%), Positives = 244/368 (66%), Gaps = 4/368 (1%)

Query: 4   TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 63
           T AAVA EAGKPL I++V++ PP+A EV ++I  T +C TD +          FP + GH
Sbjct: 3   TRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGH 61

Query: 64  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 123
           E AG+VE+VGEGV+ ++ GDHV+ +FT ECG C+ C S   N+C+ +R    +G M  DG
Sbjct: 62  EGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMP-DG 120

Query: 124 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 183
            +R S NG PV H+LG STF+EYTVVH   + KI+P APL+K C+L CGV+TG+GA +N 
Sbjct: 121 TTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNT 180

Query: 184 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 243
           AK E G +VAVFGLG VGLAA +GA+ AGA RII VD + ++ E AKKFG T FVN  E 
Sbjct: 181 AKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKEV 240

Query: 244 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI 303
           D  + E I E+T+GG D + EC GN++ M  A E  H   G +V++GV        T+P 
Sbjct: 241 D-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEISTRPF 298

Query: 304 NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 363
            ++  R  KG+ FG  +PR+D+P +VD+YM  +L L++ +TH IP  +IN+AF+ M +G+
Sbjct: 299 QLVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGK 358

Query: 364 GLRCIISM 371
            +R +I  
Sbjct: 359 SIRSVIRF 366

Length = 366

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score =  432 bits (1113), Expect = e-152
 Identities = 181/368 (49%), Positives = 258/368 (70%), Gaps = 1/368 (0%)

Query: 4   TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 63
           + AAVAW AG+PL I++V+V  PQ  EV ++I  T +C TD +         +FP I GH
Sbjct: 2   SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGH 61

Query: 64  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 123
           E AG+VE+VGEGV+ ++VGDHV+P++T ECG+C+ C S  +N+C  +R    +G+M  DG
Sbjct: 62  EGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDG 120

Query: 124 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 183
            SRFS +G+P+ H++G STFSEYTVV    +AKINP APL++VC+L CGV+TG+GA LN 
Sbjct: 121 TSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNT 180

Query: 184 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 243
           AK E G +VAVFGLG +GL+  +GAR+A ASRII +D +  +FE AKK G TD VN +++
Sbjct: 181 AKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDY 240

Query: 244 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI 303
           D+PIQEVI E+T+GGVD S EC GN++ M +A EC H GWG ++++GV        T+P 
Sbjct: 241 DKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPF 300

Query: 304 NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 363
            ++  R  +G+ FG  K RT+LP +V+ YM  ++ L+ F+TH +P  +IN+AF+ M +G+
Sbjct: 301 QLVTGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGK 360

Query: 364 GLRCIISM 371
            +R +I  
Sbjct: 361 SIRTVIHY 368

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score =  423 bits (1089), Expect = e-148
 Identities = 178/364 (48%), Positives = 243/364 (66%), Gaps = 2/364 (0%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAV WE GKPL I+++EVAPP+A EVRIK+  T +C TDL+  + K  TP  P I GHE 
Sbjct: 3   AAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPTP-LPVILGHEG 61

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
           AG+VES+G GV+ L+ GD V+P+F  +CG C+ C +   N+C   R    RG+M +DG S
Sbjct: 62  AGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDGTS 120

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+P++HFLGTSTF+EYTVV    +AKI+P APL+KVC++ CG STG GA +N AK
Sbjct: 121 RFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAK 180

Query: 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
              GS+ AVFGLG VGL+   G + AGASRII VD +  +FE+AK+ G T+ +N  + D+
Sbjct: 181 VTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQDK 240

Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PI EV+ EMT+GGVD + E  G+ D +  A +    G G +V+VGVP         P ++
Sbjct: 241 PIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL 300

Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           L  RT+KGT FG +K +  +P +V +Y  K+  L++ ITH +PF EIN  F+ M  GE +
Sbjct: 301 LTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI 360

Query: 366 RCII 369
           R I+
Sbjct: 361 RTIL 364

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  372 bits (958), Expect = e-128
 Identities = 153/370 (41%), Positives = 212/370 (57%), Gaps = 16/370 (4%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGHE 64
           AAV  E GKPL I++VE+  P   EV ++I    LC +DL+     G  P   P + GHE
Sbjct: 3   AAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVT--GDLPAPLPAVLGHE 60

Query: 65  AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQ 124
            AGVVE VG GV+ ++ GDHV+  +   CG CR+C     N+CD      + G  L DG 
Sbjct: 61  GAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCD--LGAGILGGQLPDGT 118

Query: 125 SRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA 184
            RF+ +GEPV    G  TF+EYTVV    V KI+   PLD+  +L CGV+TG+GA +N A
Sbjct: 119 RRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTA 178

Query: 185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD 244
           +   G +VAV G G VGL A +GARIAGASRII VD   ++ E A++FG T  VN SE D
Sbjct: 179 RVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASEDD 238

Query: 245 RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI 303
               E + ++T+G G D + E  G    +  A      G G AV+VG+        T  +
Sbjct: 239 --AVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPG---ETVSL 292

Query: 304 N----VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 359
                 L+E+ L+G+ +G+  PR D+P ++D+Y   +L+L++ +T R    EIN+AF  M
Sbjct: 293 PALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADM 352

Query: 360 VKGEGLRCII 369
           + GE  R +I
Sbjct: 353 LAGENARGVI 362

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  304 bits (780), Expect = e-101
 Identities = 140/364 (38%), Positives = 200/364 (54%), Gaps = 12/364 (3%)

Query: 4   TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 63
           T AAV  E G P +++DVE+  P+  EV ++I  T +C TDL   +    TPL P + GH
Sbjct: 3   TTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLPTPL-PAVLGH 61

Query: 64  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD-LLRINPVRGVMLAD 122
           E AGVVE+VG  V+ L+ GDHV+  F   CG+C +C S     C+    +N        D
Sbjct: 62  EGAGVVEAVGSAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLN--FSGRRPD 118

Query: 123 GQSRFSIN-GEPVN-HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT 180
           G +  S++ G PV+ HF G S+F+ Y VVH   V K++   PL+ +  L CG+ TG GA 
Sbjct: 119 GSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAV 178

Query: 181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 240
           LNV KP  GSS+AVFG GAVGLAA   A+IAG + II VD    R E AK+ G T  +N 
Sbjct: 179 LNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP 238

Query: 241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 300
            E D  +   I E+T GGVD +++ TG    +  A + +    G   LVG P   A    
Sbjct: 239 KEED--LVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTL 295

Query: 301 KPINVLNE-RTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 359
              ++L   +T++G   G+  P+  +P ++++Y   +   +K +T   PF +IN+A    
Sbjct: 296 DVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVTFY-PFEDINQAIADS 354

Query: 360 VKGE 363
             G+
Sbjct: 355 ESGK 358

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  293 bits (753), Expect = 2e-97
 Identities = 146/370 (39%), Positives = 208/370 (56%), Gaps = 6/370 (1%)

Query: 1   MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRI 60
           +  T A   +   +PL+I++VE+ PP   EV +KI    LC +DL         PL P  
Sbjct: 6   LRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPRPL-PMA 64

Query: 61  FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 120
            GHEAAGVV  VGEGV+DLEVGDHV+ VF   CG CR C      +C+        G +L
Sbjct: 65  LGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLL 124

Query: 121 ADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT 180
             G  R  + G  +NH LG S F+EY VV    V KI+   PL+   +  C V TG+GA 
Sbjct: 125 -SGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAV 183

Query: 181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 240
           +N A    G SVAV GLG VGL+A  GA  AGAS+++ VD +  +   A++ G T  VN 
Sbjct: 184 VNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNA 243

Query: 241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 300
            + +    E + E+T GGVD + E  G++  + +A+E    G G  V  G+P  +A    
Sbjct: 244 GDPN--AVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSV 300

Query: 301 KPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 359
             ++ V  ERTLKG++ G+  PR D+P  + +Y++ +L ++K +THR+P  EIN+ F+ +
Sbjct: 301 PALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRL 360

Query: 360 VKGEGLRCII 369
             GE +R +I
Sbjct: 361 AAGEAVRQVI 370

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score =  269 bits (691), Expect = 4e-88
 Identities = 134/371 (36%), Positives = 209/371 (56%), Gaps = 10/371 (2%)

Query: 4   TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 63
           T AAV W  G+P  ++++E+  P+A EV +K+  + LC +D +        P +P + GH
Sbjct: 2   TKAAVLWGPGQPWEVEEIELDDPKAGEVLVKLVASGLCHSDEHLVTGDLPMPRYPILGGH 61

Query: 64  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 123
           E AGVV  VG GV+ ++ GDHV+  F   CG CR C + + N+CDL     + G  ++DG
Sbjct: 62  EGAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDL-GAALLTGSQISDG 120

Query: 124 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 183
             RF  +G+ V       TFSEYTVV    V KI+   PLDK C++ CGV TG G+ +N+
Sbjct: 121 TYRFHADGQDVGQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGVPTGWGSAVNI 180

Query: 184 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 243
           A    G +V V G+G VG+ A +GA +AGA ++I VD    + E+A KFG T    + E 
Sbjct: 181 ADVRPGDTVVVMGIGGVGINAVQGAAVAGARKVIAVDPVEFKREQALKFGATHAFASMEE 240

Query: 244 DRPIQEVIAEMTNG-GVDRSVECTGNID-NMIS-AFECVHDGWGVAVLVGV--PSKDAVF 298
              +Q ++ E+TNG G D+++   G +D   I+ A      G G  V+ G+   +   V 
Sbjct: 241 --AVQ-LVRELTNGQGADKTIITVGEVDGEHIAEALSATRKG-GRVVVTGLGPMADVDVK 296

Query: 299 MTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEY 358
           +      L ++ L+GT FG   PR D+P ++++Y   +L+L++ IT      +IN+ ++ 
Sbjct: 297 VNLFELTLLQKELQGTLFGGANPRADIPRLLELYRAGKLKLDELITRTYTLDQINEGYQD 356

Query: 359 MVKGEGLRCII 369
           M+ G+ +R +I
Sbjct: 357 MLDGKNIRGVI 367

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score =  242 bits (620), Expect = 1e-77
 Identities = 135/366 (36%), Positives = 198/366 (54%), Gaps = 15/366 (4%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
             +A   G P+ ++ + V  P   EV + I+   +C TDL++ E  G    FP + GHEA
Sbjct: 4   GVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREG-GINDEFPFLLGHEA 62

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
           AGVVE+VGEGV+D+  GD+V+  +   CG CR C+      C     N  + + L DG  
Sbjct: 63  AGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTH-NATQKMTLTDGT- 120

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
                   ++  LG   F+E T+VH+G   K++P A      +L CGV  GLGA +N   
Sbjct: 121 -------ELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGG 173

Query: 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
            +RG SVAV G G VG AA  GA +AGAS+II VD   ++ E A++FG T  VN+S  D 
Sbjct: 174 VKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTD- 232

Query: 246 PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN 304
           P++  I  +T G G D  ++  G  +    AF    D  G  VLVGVP+ D       ++
Sbjct: 233 PVEA-IRALTGGFGADVVIDAVGRPETYKQAFY-ARDLAGTVVLVGVPTPDMTLELPLLD 290

Query: 305 VLNE-RTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 363
           V      LK +++G+  P  D P +VD+Y+  +L L+ F+T RI   ++ +AF+ M  G+
Sbjct: 291 VFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGD 350

Query: 364 GLRCII 369
            LR ++
Sbjct: 351 VLRSVV 356

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  230 bits (589), Expect = 7e-73
 Identities = 123/375 (32%), Positives = 184/375 (49%), Gaps = 20/375 (5%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPR--IFGH 63
           AAV      PL I+++ V  P+  E+ I++    +C +DL+    KG+ P FP   + GH
Sbjct: 3   AAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVL--KGELP-FPPPFVLGH 59

Query: 64  EAAGVVESVGEGVSD---LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 120
           E +G V  VG  V +   L VGD V+  F   CG CR+C     N+C+           L
Sbjct: 60  EISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTL 119

Query: 121 ADGQSR-FSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA 179
            DG +R F ++G PV  +      +EY VV +  +A +       +  +L C   T  GA
Sbjct: 120 YDGTTRLFRLDGGPVYMYSM-GGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGA 178

Query: 180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 239
             + A    G +VAV G+G VG +A + A+  GAS II VD   ++  +AK+ G T  VN
Sbjct: 179 LKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVN 238

Query: 240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV- 297
            ++ D      I E+T G GVD  VE  G  +    A + V DG G AV+VG+    A  
Sbjct: 239 AAKEDAV--AAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATA 295

Query: 298 -FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 356
                 + V     + G++    +PR DLP +V +  + +L+ E  +TH+    EIN+A+
Sbjct: 296 EIPITRL-VRRGIKIIGSY--GARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAY 352

Query: 357 EYMVKGEG-LRCIIS 370
           E + KG    R I+ 
Sbjct: 353 ENLRKGLIHGRAIVE 367

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  199 bits (509), Expect = 3e-61
 Identities = 101/360 (28%), Positives = 157/360 (43%), Gaps = 24/360 (6%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDL-YFWESKGQTPLFPRIFGHE 64
           AAV +  G  + +++     P   +V I++  T +C +DL  +   +   P    I GHE
Sbjct: 3   AAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHE 62

Query: 65  AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQ 124
             G V  VG  V   +VGD V+      CG CR+CR+   N+C+        G+      
Sbjct: 63  FVGEVVEVGV-VRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLG----- 116

Query: 125 SRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA 184
                         G   F+EY  V +       P    ++   L+  ++T        A
Sbjct: 117 ----------GGIDGG--FAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAERA 164

Query: 185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD 244
               G +V V G G +GL A   A++ GAS +I VDRS +R E AK+ G  D V     D
Sbjct: 165 AVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSED 224

Query: 245 RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI 303
                 I E+T G G D  +E  G+   +  A E +  G G  V+VGV   + + +   +
Sbjct: 225 DAG-AEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDIPLPAGL 282

Query: 304 NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 363
            V  E TL+G+       R D    +D+  + +++ EK ITHR+P  +  +A+E     +
Sbjct: 283 VVSKELTLRGSL--RPSGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRK 340

Length = 350

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  190 bits (486), Expect = 1e-58
 Identities = 83/304 (27%), Positives = 125/304 (41%), Gaps = 34/304 (11%)

Query: 30  EVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPV 88
           EV ++++   LC TDL+        P   P I GHE AGVV  VG GV+ ++VGD V+ +
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVL 60

Query: 89  FTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTV 148
               CG C  CR        L                                 F+EY V
Sbjct: 61  PNLGCGTCELCRELCPGGGIL--------------------------GEGLDGGFAEYVV 94

Query: 149 VHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGA 208
           V +  +  +     L++  +L   ++T   A       + G +V V G G VGL AA+ A
Sbjct: 95  VPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLA 154

Query: 209 RIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 268
           + AGA R+I  DRS ++ E AK+ G    ++  E D    E +     GG D  ++  G 
Sbjct: 155 KAAGA-RVIVTDRSDEKLELAKELGADHVIDYKEEDLE--EELRLTGGGGADVVIDAVGG 211

Query: 269 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSV 328
            + +  A   +  G G  V+VG  S           +  E T+ G+  G  +   D    
Sbjct: 212 PETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTRE---DFEEA 267

Query: 329 VDMY 332
           +D+ 
Sbjct: 268 LDLL 271

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  192 bits (490), Expect = 2e-58
 Identities = 118/375 (31%), Positives = 175/375 (46%), Gaps = 42/375 (11%)

Query: 1   MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRI 60
           M +  AAV  + G+PL I++V V  P   EV IK++   +C TDL+  +     P  P I
Sbjct: 1   MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLI 60

Query: 61  FGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 119
            GHE  G V  VGEGV+ L+VGD V +      CG+C +CRS   N+C   +I       
Sbjct: 61  PGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKI------- 113

Query: 120 LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA 179
                + ++ +G           ++EY VV +  V KI     L +   L C   T   A
Sbjct: 114 -----TGYTTDG----------GYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRA 158

Query: 180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 239
            L  A  + G  VAV G G +G  A + A+  GA  +I + RS ++ E AKK G    +N
Sbjct: 159 -LKKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVIN 216

Query: 240 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM 299
           +S+ D    E + E+     D  ++  G    +  + + +  G G  VLVG+P       
Sbjct: 217 SSDSDAL--EAVKEI----ADAIIDTVGPAT-LEPSLKALRRG-GTLVLVGLPGGGP-IP 267

Query: 300 TKPIN--VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 357
             P    +L E ++ G+  G    R DL   +D     +++ E  I   IP  EIN+A+E
Sbjct: 268 LLPAFLLILKEISIVGSLVGT---RADLEEALDFAAEGKIKPE--ILETIPLDEINEAYE 322

Query: 358 YMVKGEGL-RCIISM 371
            M KG+   R +I M
Sbjct: 323 RMEKGKVRGRAVIDM 337

Length = 339

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  183 bits (468), Expect = 5e-55
 Identities = 103/373 (27%), Positives = 158/373 (42%), Gaps = 56/373 (15%)

Query: 7   AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPLFPRIFGHE 64
           A+       L  +D+    P   EV +K+K   +C +D+  Y           P + GHE
Sbjct: 3   ALVLTGPGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYL---GTGAYHPPLVLGHE 59

Query: 65  AAGVVESVGEGVSDLEVGDHV-----LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 119
            +G VE VG GV DL VGD V     LP     CG C +C+    ++C     N     +
Sbjct: 60  FSGTVEEVGSGVDDLAVGDRVAVNPLLP-----CGKCEYCKKGEYSLCS----N--YDYI 108

Query: 120 LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCG----VST 175
              G  R                F+EY  V +  + KI    P D V           + 
Sbjct: 109 ---GSRRDG-------------AFAEYVSVPARNLIKI----P-DHVDYEEAAMIEPAAV 147

Query: 176 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 235
            L A + +A    G +V V G G +GL A +  +I GA R+I VD   ++   A++ G  
Sbjct: 148 ALHA-VRLAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGAD 206

Query: 236 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 294
           D +N  E D    E + E+T G G D  +E  G+   +  A      G G  VLVG+P  
Sbjct: 207 DTINPKEED---VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYG 262

Query: 295 DAVFMTKPIN--VLNERTLKGTFFGNYKPRT--DLPSVVDMYMNKQLELEKFITHRIPFS 350
           D     +     +  E T++G++     P    +  + +D+  + ++++E  ITHR+P  
Sbjct: 263 DVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLE 322

Query: 351 EINKAFEYMVKGE 363
           +   AFE +   E
Sbjct: 323 DGPAAFERLADRE 335

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  181 bits (462), Expect = 3e-54
 Identities = 111/372 (29%), Positives = 173/372 (46%), Gaps = 50/372 (13%)

Query: 7   AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGHEA 65
           A+ +E    L +++V V  P   EV IK+    +C TDL+ +E  G+     P + GHE 
Sbjct: 3   ALVYEGPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYE--GEFGAAPPLVPGHEF 60

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRSDVSNMCDLLRINPVRGVMLA 121
           AGVV +VG  V+  +VGD V      +    CG+C +CR    N+C+ L      GV   
Sbjct: 61  AGVVVAVGSKVTGFKVGDRV----AVDPNIYCGECFYCRRGRPNLCENLT---AVGVTRN 113

Query: 122 DGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI-NPLAPLDKVCI--LSCGVSTGLG 178
            G                   F+EY VV +  V KI + L+  +      LSC V    G
Sbjct: 114 GG-------------------FAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVH---G 151

Query: 179 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 238
             L++   + G SV VFG G +GL  A+  ++ GASR+   + + ++ E AKK G T+ V
Sbjct: 152 --LDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETV 209

Query: 239 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 298
           + S  D    E   E    G D  +E TG    +  A E    G G  ++ GV + DA  
Sbjct: 210 DPSRED---PEAQKEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARV 265

Query: 299 MTKPINVLN-ERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 357
              P  +   E T+ G+F   Y      P  + +  + +++++  ++HR+P  E+ +A E
Sbjct: 266 SISPFEIFQKELTIIGSFINPYT----FPRAIALLESGKIDVKGLVSHRLPLEEVPEALE 321

Query: 358 YMVKGEGLRCII 369
            M  G  L+ ++
Sbjct: 322 GMRSGGALKVVV 333

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  179 bits (457), Expect = 2e-53
 Identities = 106/364 (29%), Positives = 170/364 (46%), Gaps = 43/364 (11%)

Query: 7   AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLY-------FWESKGQTPL--- 56
           A  +   K + +++V   P +  EV+IK+ +  +C +DL+       F  ++G   L   
Sbjct: 3   AARYHGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGE 62

Query: 57  -FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 115
             P   GHE +GVV  VG GV+  +VGD V+   T +CG C  C+  + N+CD   +  +
Sbjct: 63  TAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCD--SLGFI 120

Query: 116 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 175
            G+    G                   F+EY VV +  V K+    PL+    L   ++ 
Sbjct: 121 -GLGGGGG------------------GFAEYVVVPAYHVHKLPDNVPLE-EAALVEPLAV 160

Query: 176 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 235
              A +  +  + G +  V G G +GL      + AGAS+II  + S  R E A++ G T
Sbjct: 161 AWHA-VRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGAT 219

Query: 236 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 294
             ++ +E D  +   + ++T G GVD S +C G    + +A + +    G AV V +  K
Sbjct: 220 IVLDPTEVD--VVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWEK 276

Query: 295 DAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI-N 353
              F    + VL E+TL G+    Y  R D   V+D+  + +++ E  IT RIP  +I  
Sbjct: 277 PISFNPNDL-VLKEKTLTGSI--CY-TREDFEEVIDLLASGKIDAEPLITSRIPLEDIVE 332

Query: 354 KAFE 357
           K FE
Sbjct: 333 KGFE 336

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  175 bits (447), Expect = 5e-52
 Identities = 112/359 (31%), Positives = 169/359 (47%), Gaps = 44/359 (12%)

Query: 13  GKPLIIQDVEVAPPQAM--EVRIKIKYTSLCRTDLYFWESKGQTPLF--PRIFGHEAAGV 68
            KP  ++ V++  P     EV +++K   +C +DL+ +   G+ P    PRI GHE +G 
Sbjct: 7   EKPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYH--GRNPFASYPRILGHELSGE 64

Query: 69  VESVGEGVSDLEVGDHV--LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSR 126
           V  VGEGV+ L+VGD V   P     CG+C  CR    N C+ L+   V GV   DG   
Sbjct: 65  VVEVGEGVAGLKVGDRVVVDPYI--SCGECYACRKGRPNCCENLQ---VLGVH-RDG--- 115

Query: 127 FSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP 186
                           F+EY VV +  +  +     LD+  ++   ++ G  A    A  
Sbjct: 116 ---------------GFAEYIVVPADAL-LVPEGLSLDQAALVEP-LAIGAHAV-RRAGV 157

Query: 187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP 246
             G +V V G G +GL   + A+  GA R+I VD   +R E A++ G  D +N  + D  
Sbjct: 158 TAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGDED-- 214

Query: 247 IQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           +   + E+T+G G D  ++ TGN  +M  A E V  G G  VLVG+      F       
Sbjct: 215 VAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSKGPVTFPDPEF-H 272

Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG 364
             E T+ G+       R D P V+D+  + +++ E  ITHR PF ++ +AF+      G
Sbjct: 273 KKELTILGSRNAT---REDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPG 328

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  173 bits (441), Expect = 4e-51
 Identities = 101/377 (26%), Positives = 162/377 (42%), Gaps = 51/377 (13%)

Query: 7   AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAA 66
           A        + +++V V  P   EV +K++   +C TD+            PRI GHE A
Sbjct: 3   AAVLHGPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIA 62

Query: 67  GVVESVGEGVSDLEVGDHVLPVFTG-ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
           G +  VG+GV+  +VGD V  V     CG+C +C     NMC   +        L DG  
Sbjct: 63  GEIVEVGDGVTGFKVGDRVF-VAPHVPCGECHYCLRGNENMCPNYKK----FGNLYDG-- 115

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAK--INPLAPLDKVCI--------LSCGVST 175
                            F+EY  V +  V +  +  L   D V          L+C +  
Sbjct: 116 ----------------GFAEYVRVPAWAVKRGGVLKLP--DNVSFEEAALVEPLACCI-- 155

Query: 176 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 235
                   A  + G +V V G G +GL  A  A+ +GA ++I  D +  R E AKK G  
Sbjct: 156 ---NAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGAD 212

Query: 236 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 294
             ++ +E D    E + E+T+G G D  +  TG+ +    A E V  G G  +  G   K
Sbjct: 213 YTIDAAEEDLV--EKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPK 269

Query: 295 DAVFMTKPINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI 352
            +  +    N++   E T+ G++        D    +++  + +++++  ITHR P  +I
Sbjct: 270 GS-TVNIDPNLIHYREITITGSY---AASPEDYKEALELIASGKIDVKDLITHRFPLEDI 325

Query: 353 NKAFEYMVKGEGLRCII 369
            +AFE    G+ L+ +I
Sbjct: 326 EEAFELAADGKSLKIVI 342

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score =  169 bits (430), Expect = 2e-49
 Identities = 100/396 (25%), Positives = 163/396 (41%), Gaps = 98/396 (24%)

Query: 14  KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF----PRIFGHEAAGVV 69
             L +++  +  P   EV ++++   +C +D+++++  G+   F    P + GHE+AG V
Sbjct: 8   GDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYK-HGRIGDFVVKEPMVLGHESAGTV 66

Query: 70  ESVGEGVSDLEVGDHV-----LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQ 124
            +VG GV+ L+VGD V     +P     C  C  C+S   N+C                 
Sbjct: 67  VAVGSGVTHLKVGDRVAIEPGVP-----CRTCEFCKSGRYNLC----------------- 104

Query: 125 SRFSINGEPVNHFLGTS----TFSEYTVVHSGCVAKIN------------PLAPLDKVCI 168
                   P   F  T     T   Y    +    K+             PL+    V +
Sbjct: 105 --------PDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLS----VGV 152

Query: 169 LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE 228
            +C            A    G +V VFG G +GL  A  A+  GA++++  D    R E 
Sbjct: 153 HAC----------RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEF 202

Query: 229 AKKFGVTDFVNTSEHDRP-IQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGW--- 283
           AK+ G T  VN    D P   E IAE+  G G D  +ECTG       A  C+       
Sbjct: 203 AKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTG-------AESCIQTAIYAT 255

Query: 284 ---GVAVLVGVPSKDAVFMTKPINVLNER--TLKGTF-FGNYKPRTDLPSVVDMYMNKQL 337
              G  VLVG+   +      P++  + R   ++G F + N       P+ +++  + ++
Sbjct: 256 RPGGTVVLVGMGKPEVTL---PLSAASLREIDIRGVFRYAN-----TYPTAIELLASGKV 307

Query: 338 ELEKFITHRIPFSEINKAFEYMVKG--EGLRCIISM 371
           +++  ITHR P  +  +AFE   KG    ++ +I  
Sbjct: 308 DVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVIEG 343

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  168 bits (427), Expect = 6e-49
 Identities = 103/361 (28%), Positives = 158/361 (43%), Gaps = 38/361 (10%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAV  E G+PL I++V    P    V ++++   +CR+D + W+        P + GHE 
Sbjct: 3   AAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEF 62

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
           AGVV  VGE VS   VGD V   F   CG C +CR+  SN+C+               Q 
Sbjct: 63  AGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQV------------QP 110

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKV-----CILSCGVSTGLGAT 180
            F+  G          +F+EY  V     A +N +   D V       L C  +T   A 
Sbjct: 111 GFTHPG----------SFAEYVAVPR---ADVNLVRLPDDVDFVTAAGLGCRFATAFRAL 157

Query: 181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 240
           ++ A+ + G  VAV G G VGL+A   A   GA R+I VD    + E A++ G    VN 
Sbjct: 158 VHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNA 216

Query: 241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 300
           SE +      + ++T GG   SV+  G  +   ++   +    G  V VG+   +   + 
Sbjct: 217 SEVEDV-AAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVA 274

Query: 301 KPIN--VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEY 358
            P++  V  E  + G+  G   P     +++ +  + +L+ E  +   I   E   A   
Sbjct: 275 LPMDRVVARELEIVGS-HGM--PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAA 331

Query: 359 M 359
           M
Sbjct: 332 M 332

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score =  165 bits (420), Expect = 5e-48
 Identities = 107/336 (31%), Positives = 145/336 (43%), Gaps = 33/336 (9%)

Query: 33  IKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE 92
           +++  TS+C +DL+ +           I GHE  G V  VG  V  L+ GD V       
Sbjct: 30  VRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITF 89

Query: 93  CGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVH-- 150
           CG CR CR      C            L   +    I+G            +EY  V   
Sbjct: 90  CGRCRFCRRGYHAHC---------ENGLWGWKLGNRIDG----------GQAEYVRVPYA 130

Query: 151 SGCVAKINPLAPLDKVCILSCGVSTGL-GATLNVAKPERGSSVAVFGLGAVGLAAAEGAR 209
              +AKI    P +   +LS  + TG  GA L   KP  GS+VAV G G VGL A  GAR
Sbjct: 131 DMNLAKIPDGLPDEDALMLSDILPTGFHGAELAGIKP--GSTVAVIGAGPVGLCAVAGAR 188

Query: 210 IAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN 268
           + GA+RII VD + +R + AK+ G TD +N    D  I E I E+T G GVD  +E  G 
Sbjct: 189 LLGAARIIAVDSNPERLDLAKEAGATDIINPKNGD--IVEQILELTGGRGVDCVIEAVGF 246

Query: 269 IDNMISAFECVHDGWGVAVLVGVP-SKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPS 327
            +    A + V  G G    VGV    D + +       N  T K         R  +P 
Sbjct: 247 EETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKN-LTFKTGLVPV---RARMPE 301

Query: 328 VVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 363
           ++D+    +++  K ITHR P  +I KA+       
Sbjct: 302 LLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKP 337

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  165 bits (419), Expect = 1e-47
 Identities = 99/379 (26%), Positives = 163/379 (43%), Gaps = 37/379 (9%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPR--IFGH 63
           AAV    GKPL I++V +   +   V ++++   +C +D++     G+ P  P   I GH
Sbjct: 3   AAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTV--AGRRPRVPLPIILGH 60

Query: 64  EAAGVVESVGEGVSD------LEVGDHVL-PVFTGECGDCRHCRSDVSNMCDLLRINPVR 116
           E  G V ++G GV+       L+VGD V   V    CG C  C       C+  +     
Sbjct: 61  EGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAP-CGRCYRCLVGDPTKCENRKK---- 115

Query: 117 GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGC-VAKINPLAPLDKVCILSCGVST 175
                          +P  H  G   ++E+  +  G  + ++    P +     +C ++T
Sbjct: 116 -YGHEAS------CDDP--HLSGG--YAEHIYLPPGTAIVRVPDNVPDEVAAPANCALAT 164

Query: 176 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 235
            L A         G +V V G G +GL A   A++AGA R+I +D S +R E A++FG  
Sbjct: 165 VLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGAD 224

Query: 236 DFVNTSEH-DRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 293
             ++  E  D   + ++ ++T G G D  +E +G+   +    E +  G G  VLVG  +
Sbjct: 225 ATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVA 283

Query: 294 KDAVFMTKPIN-VLNERTLKGTFFGNYKPR--TDLPSVVDMYMNKQLELEKFITHRIPFS 350
                   P   V    T+ G    NY P         ++   ++     + +THR P  
Sbjct: 284 PAGTVPLDPERIVRKNLTIIGVH--NYDPSHLYRAVRFLERTQDRFP-FAELVTHRYPLE 340

Query: 351 EINKAFEYMVKGEGLRCII 369
           +IN+A E    G  L+ +I
Sbjct: 341 DINEALELAESGTALKVVI 359

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  162 bits (412), Expect = 7e-47
 Identities = 103/358 (28%), Positives = 157/358 (43%), Gaps = 36/358 (10%)

Query: 18  IQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF-GHEAAGVVESVGEGV 76
           +++  V  P   EV +++K + LC +DL+++    + P +  +  GHE AGVV +VG GV
Sbjct: 14  LREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGV 73

Query: 77  SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNH 136
           +   VGD V+      CG CR+CR     +C                      +      
Sbjct: 74  THFRVGDRVMVYHYVGCGACRNCRRGWMQLCT---------------------SKRAAYG 112

Query: 137 FLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 196
           +      +EY +V    +  +          +L CG+ T   A L         +V V G
Sbjct: 113 WNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHA-LRRVGVSGRDTVLVVG 171

Query: 197 LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN 256
            G VGL A   AR  GA  +IGVD S +R E AK  G  DFV  S  D    + I E+T+
Sbjct: 172 AGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGA-DFVINSGQDDV--QEIRELTS 228

Query: 257 G-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL--NERTLKG 313
           G G D ++EC+GN      A E V   WG  VLVG   +      +  N L   +RTL G
Sbjct: 229 GAGADVAIECSGNTAARRLALEAVRP-WGRLVLVGEGGE---LTIEVSNDLIRKQRTLIG 284

Query: 314 TFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 371
           ++   Y    D+    +     +LE+++ +THR    +  +A+    +GE  + +   
Sbjct: 285 SW---YFSVPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF 339

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  162 bits (412), Expect = 8e-47
 Identities = 100/361 (27%), Positives = 148/361 (40%), Gaps = 36/361 (9%)

Query: 7   AVAWEAGKPLIIQ--DVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGH 63
           A  +  G   ++   +V V  P   EV +K+K   +C +DL+  +    T    P   GH
Sbjct: 3   AWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGH 62

Query: 64  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 123
           E AG V  VG GV++ +VGD V       CG C  CR    N+C            L  G
Sbjct: 63  EIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLC------------LNQG 110

Query: 124 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 183
                I+G           F+EY VV +  +  +    P  +  + +  V T   A +  
Sbjct: 111 MPGLGIDG----------GFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRA 160

Query: 184 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 243
            + + G +V V GLG +GL A + A+  GA  +I VD   ++ E AK+ G  D V  S  
Sbjct: 161 GEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGA-DEVLNSLD 218

Query: 244 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI 303
           D P  +  A    GG D   +  G       A + V  G G  V+VG+           +
Sbjct: 219 DSPKDKKAAG-LGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDKLTVDLSDL 276

Query: 304 NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 363
            +  E  + G+F G      DLP V+D+    +L          P  EI +  E + KG+
Sbjct: 277 -IARELRIIGSFGG---TPEDLPEVLDLIAKGKL---DPQVETRPLDEIPEVLERLHKGK 329

Query: 364 G 364
            
Sbjct: 330 V 330

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score =  150 bits (381), Expect = 2e-42
 Identities = 110/372 (29%), Positives = 165/372 (44%), Gaps = 55/372 (14%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE----SKGQTPLFPRIF 61
           A V  +AG    + +V V  P   EV IK+   S+C TD++ +E    ++ +    P IF
Sbjct: 3   AIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRI-KPPLIF 61

Query: 62  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRSDVSNMCDLLRINPVRG 117
           GHE AG V  VGEGV+ ++VGD+V    + E    CG C  CR+   ++C   +I    G
Sbjct: 62  GHEFAGEVVEVGEGVTRVKVGDYV----SAETHIVCGKCYQCRTGNYHVCQNTKI---LG 114

Query: 118 VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI---LSCGVS 174
           V           +G           F+EY VV    + K +   P +   I   L   V 
Sbjct: 115 V---------DTDG----------CFAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAVH 155

Query: 175 TGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 234
           T L   +       G SV + G G +GL A   A+ AGAS +I  D +  R E AKK G 
Sbjct: 156 TVLAGDV------SGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGA 209

Query: 235 TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 294
              +N  E D  + EV +     GVD  +E +GN   +    + +  G G   ++G+P  
Sbjct: 210 DVVINPREED--VVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPG 266

Query: 295 DAVFMTKPINVLNERTLKG-TFFGNYKPR--TDLPSVVDMYMNKQLELEKFITHRIPFSE 351
                   I++ N    KG T  G    +       V  +  + +++L   ITH++P  +
Sbjct: 267 PV-----DIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPVITHKLPLED 321

Query: 352 INKAFEYMVKGE 363
             +AFE M  G+
Sbjct: 322 FEEAFELMRSGK 333

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  148 bits (377), Expect = 9e-42
 Identities = 102/372 (27%), Positives = 154/372 (41%), Gaps = 53/372 (14%)

Query: 4   TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPRI 60
            AA V     KP  ++DV V  P   EV +K++ + +C TDL+     G  P+    P I
Sbjct: 2   KAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAA--LGDWPVKPKLPLI 59

Query: 61  FGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 119
            GHE AGVV +VG GVS L+VGD V +      CG C +CR+    +C            
Sbjct: 60  GGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCP----------- 108

Query: 120 LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA 179
                S ++++G          TF+EY +  +  V  I      ++   L C   T   A
Sbjct: 109 -NQKNSGYTVDG----------TFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKA 157

Query: 180 TLNVAKPERGSSVAVFGLG------AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 233
            L  A  + G  V + G G       V  A A G       R+I +D   ++ E AK+ G
Sbjct: 158 -LKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGL------RVIAIDVGDEKLELAKELG 210

Query: 234 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 293
              FV+  + D  ++ V      GG    V    +      A + +  G G  V VG+P 
Sbjct: 211 ADAFVDFKKSD-DVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPP 268

Query: 294 KDAVFMTKPIN--VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSE 351
               F+       VL   T+ G+  G    R DL   ++     ++   K     +P  +
Sbjct: 269 GG--FIPLDPFDLVLRGITIVGSLVGT---RQDLQEALEFAARGKV---KPHIQVVPLED 320

Query: 352 INKAFEYMVKGE 363
           +N+ FE M +G+
Sbjct: 321 LNEVFEKMEEGK 332

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score =  148 bits (377), Expect = 3e-41
 Identities = 114/390 (29%), Positives = 173/390 (44%), Gaps = 61/390 (15%)

Query: 7   AVAWEAGKPLIIQDVEVA--PPQAME----VRIKIKYTSLCRTDLYFWESKGQTPLFPR- 59
           A+ W  GK     DV V   P   +E      +++  T++C +DL+ +   G  P   + 
Sbjct: 3   ALVWH-GK----GDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYH--GYIPGMKKG 55

Query: 60  -IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGV 118
            I GHE  GVVE VG  V +L+VGD V+  FT  CG+C +C+  + + CD    NP   +
Sbjct: 56  DILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCD--NTNPSAEM 113

Query: 119 MLADGQSRFSINGEPVNHFLG--TSTFSEYTVV---HSGCVAKINPLAPLDKVCILSCGV 173
               G +   I G    H  G      +EY  V     G   KI      +K   LS  +
Sbjct: 114 AKLYGHAGAGIFGYS--HLTGGYAGGQAEYVRVPFADVGPF-KIPDDLSDEKALFLSDIL 170

Query: 174 STGL-GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF 232
            TG   A L   KP  G +VAV+G G VGL AA  A++ GA R+I +DR  +R E A+  
Sbjct: 171 PTGYHAAELAEVKP--GDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSH 228

Query: 233 GVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC---------------------TGNID 270
              + +N  E D  + E + E+T G G D  ++                      T   D
Sbjct: 229 LGAETINFEEVDDVV-EALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPD 287

Query: 271 NMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVLNER--TLKGTFFGNYKPRTDLPS 327
            +  A + V  G G   ++GV       + K PI     +  TL+    G    +  LP 
Sbjct: 288 ALREAIQAVRKG-GTVSIIGVY---GGTVNKFPIGAAMNKGLTLRM---GQTHVQRYLPR 340

Query: 328 VVDMYMNKQLELEKFITHRIPFSEINKAFE 357
           ++++  + +L+    ITHR+P  +  +A++
Sbjct: 341 LLELIESGELDPSFIITHRLPLEDAPEAYK 370

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  147 bits (373), Expect = 4e-41
 Identities = 95/371 (25%), Positives = 163/371 (43%), Gaps = 55/371 (14%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWES---KGQTPLFPRIFG 62
           AA  +E GKPL ++DV V  P   +V +++    +C +DL+  +           P   G
Sbjct: 3   AARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLG 62

Query: 63  HEAAGVVESVGEGVSDLEVGDHVL--PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 120
           HE AG VE VG GV  L+ GD V+  P +   CG CR+CR    N C+  R         
Sbjct: 63  HENAGWVEEVGSGVDGLKEGDPVVVHPPWG--CGTCRYCRRGEENYCENARFPG------ 114

Query: 121 ADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSC-GVSTGLGA 179
                    +G           F+EY +V S  + K+       +   L+  G++     
Sbjct: 115 ------IGTDG----------GFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAV 158

Query: 180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 239
              +   + GS+V V G+G +G  A +  R    + +I VDRS +  + A++ G    +N
Sbjct: 159 KKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLN 218

Query: 240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVG------VP 292
            S+      E + E+T G G D  ++  G+ + +  A + +  G G  V+VG      +P
Sbjct: 219 ASDDVV---EEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGHGRLP 274

Query: 293 SKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI 352
           + D V          E ++ G+ +G      +L  VV +  + ++++E     + P  + 
Sbjct: 275 TSDLVPT--------EISVIGSLWGTR---AELVEVVALAESGKVKVE---ITKFPLEDA 320

Query: 353 NKAFEYMVKGE 363
           N+A + + +G 
Sbjct: 321 NEALDRLREGR 331

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score =  146 bits (371), Expect = 9e-41
 Identities = 100/371 (26%), Positives = 158/371 (42%), Gaps = 35/371 (9%)

Query: 7   AVAWEAGKPLIIQDVEVAPPQAMEVR---IKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 63
           AV ++   P  ++  EV  PQ  +     +K+   ++C +DL+ +     +     + GH
Sbjct: 3   AVVFK--GPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPSTP-GFVLGH 59

Query: 64  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 123
           E  G V  VG  V  L+VGD V+  FT  CG+C +CR   S  C        +G +    
Sbjct: 60  EFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCA-------KGGLFGYA 112

Query: 124 QSRFSINGEPVNHFLGTSTFSEYTVV--HSGCVAKINPLAPLDKVCILSCGVSTGLGATL 181
            S  +++G            +EY  V    G + K+      +   +L   + TG     
Sbjct: 113 GSP-NLDGAQ----------AEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAK 161

Query: 182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 241
             A+   G +VAV G G VGL A   A++ GA+R+  VD   +R E A   G        
Sbjct: 162 R-AQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE--PINF 218

Query: 242 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 300
           E   P++ V  E T G G D  +E  G    +  AF+ V    GV   VGV + +     
Sbjct: 219 EDAEPVERV-REATEGRGADVVLEAVGGAAALDLAFDLVRP-GGVISSVGVHTAEEFPFP 276

Query: 301 KPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMV 360
                    TL+   FG    R+  P ++ +  + +L+LE  I HR+P  E  +A+    
Sbjct: 277 GLDAYNKNLTLR---FGRCPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFD 333

Query: 361 KGEGLRCIISM 371
           K + L+ ++  
Sbjct: 334 KRKVLKVVLDP 344

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score =  143 bits (363), Expect = 1e-39
 Identities = 95/371 (25%), Positives = 146/371 (39%), Gaps = 53/371 (14%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLY--FWESKGQTPLFPRIFGH 63
           A      GK   I +  +      +  ++    + C +D++  +  + G+      I GH
Sbjct: 3   AFAMLGIGKVGWI-EKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERH--GMILGH 59

Query: 64  EAAGVVESVGEGVSDLEVGDHVL-PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 122
           EA GVVE VG  V D + GD V+ P  T         +    +           G ML  
Sbjct: 60  EAVGVVEEVGSEVKDFKPGDRVIVPAIT-PDWRSVAAQRGYPSQS---------GGML-- 107

Query: 123 GQSRFS--INGEPVNHFLGTSTFSEYTVVHS--GCVAKINPLAPLDKVCILSCGVSTGLG 178
           G  +FS   +G           F+EY  V+     +A +      ++  +L   +STG  
Sbjct: 108 GGWKFSNFKDG----------VFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFH 157

Query: 179 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 238
                A  + G +VAVFG+G VGL A  GAR+ GA RII V     R E AK++G TD V
Sbjct: 158 GAEL-ANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIV 216

Query: 239 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 297
           +    +  + E I ++T G GVD  +   G  D    A + +  G G    V    +D  
Sbjct: 217 DY--KNGDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDY 273

Query: 298 FMTKPINVLNERTLKGTFFGNYKPRTDL--------PSVVDMYMNKQLELEKFITHRI-P 348
                  +   R   G   G+      L          +  +    +++  K +TH    
Sbjct: 274 -------LPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEYGRVDPSKLLTHHFFG 326

Query: 349 FSEINKAFEYM 359
           F +I +A   M
Sbjct: 327 FDDIEEALMLM 337

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  141 bits (358), Expect = 4e-39
 Identities = 99/360 (27%), Positives = 149/360 (41%), Gaps = 40/360 (11%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAV   AG PL  ++V V  P   EV IKI+   +C TDL+  E       +P + GHE 
Sbjct: 2   AAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEI 61

Query: 66  AGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQ 124
            G V  VG GV   +VGD V +    G CG C +CR  + N+C                 
Sbjct: 62  VGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTG---------- 111

Query: 125 SRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA 184
             ++  G           ++EY V  +     +    PL +   L C   T   A L  A
Sbjct: 112 --YTTQG----------GYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSA-LRDA 158

Query: 185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD 244
            P  G  VAV G+G +G  A + AR  G    + + RS  + E A+K G  + V++    
Sbjct: 159 GPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGAEL 217

Query: 245 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA-VFMTKPI 303
                   +   GG D  +    +     +A   +  G G  VLVG+P          P+
Sbjct: 218 D------EQAAAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESPPFSPDIFPL 270

Query: 304 NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 363
            ++  +++ G+  G    R DL   +D     ++   K +    P  + N+A+E M KG+
Sbjct: 271 -IMKRQSIAGSTHGG---RADLQEALDFAAEGKV---KPMIETFPLDQANEAYERMEKGD 323

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  137 bits (348), Expect = 2e-37
 Identities = 100/369 (27%), Positives = 153/369 (41%), Gaps = 52/369 (14%)

Query: 5   AAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE------SKGQTPL-- 56
           AAAV  E GKPL   +++   P   EV +K+    +C +DL+ W+            L  
Sbjct: 3   AAAVV-EPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDD 61

Query: 57  ----FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT-GECGDCRHCRSDVSNMCDLLR 111
                P + GHE  G V +VG   +D++VGD VL V+    CG+C  C +   N+C   R
Sbjct: 62  RGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVL-VYPWIGCGECPVCLAGDENLCAKGR 120

Query: 112 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVV-HSGCVAKINPLAPLDKVCILS 170
                G+    G                   ++EY +V HS  +     L        L+
Sbjct: 121 AL---GIFQDGG-------------------YAEYVIVPHSRYLVDPGGL-DPALAATLA 157

Query: 171 CGVSTGLGA--TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE 228
           C   T   A   L     +    V + G G +GL A    +  G + II VD    + E 
Sbjct: 158 CSGLTAYSAVKKLMPLVADE--PVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEA 215

Query: 229 AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVL 288
           AK  G    VN S+ D   +  I +   GGVD  ++   N      AF+ +  G G  VL
Sbjct: 216 AKAAGADVVVNGSDPDAAKR--IIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVL 272

Query: 289 VGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP 348
           VG+   +A     P+  L   T++G++ G+     +L  +V +   K  +L+       P
Sbjct: 273 VGLFGGEATLPL-PLLPLRALTIQGSYVGSL---EELRELVALA--KAGKLKPIPLTERP 326

Query: 349 FSEINKAFE 357
            S++N A +
Sbjct: 327 LSDVNDALD 335

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  135 bits (342), Expect = 8e-37
 Identities = 99/361 (27%), Positives = 161/361 (44%), Gaps = 42/361 (11%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL--FPRIFGH 63
           AA+  +  KPL I++V    P   EV IK+K   +C  DL FW  KG  P   +P I GH
Sbjct: 3   AAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFW--KGFFPRGKYPLILGH 60

Query: 64  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 123
           E  G VE VGEGV   + GD V+  +   CG C +C S   N+C                
Sbjct: 61  EIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRA------------ 108

Query: 124 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 183
                  GE V+       F+EY  V    + K+      +   + +C V T + A L  
Sbjct: 109 -----EYGEEVDGG-----FAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHA-LKR 157

Query: 184 AKPERGSSVAV-FGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 242
           A  ++G +V V    G VG+ A + A+  GA R+I V RS ++ +  K+ G    ++ S+
Sbjct: 158 AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSK 216

Query: 243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP 302
                 E + ++  GG D  +E  G    +  +   ++ G G  VL+G  + D   +   
Sbjct: 217 ----FSEDVKKL--GGADVVIELVG-SPTIEESLRSLNKG-GRLVLIGNVTPDPAPLRPG 268

Query: 303 INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG 362
           + +L E  + G+       + D+   + +   K+ +++  I   +   +IN+A E +  G
Sbjct: 269 LLILKEIRIIGSISAT---KADVEEALKLV--KEGKIKPVIDRVVSLEDINEALEDLKSG 323

Query: 363 E 363
           +
Sbjct: 324 K 324

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score =  130 bits (330), Expect = 7e-35
 Identities = 104/336 (30%), Positives = 149/336 (44%), Gaps = 48/336 (14%)

Query: 33  IKIKYTSLCRTDLYFWESKGQTPLFP--RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT 90
           +K+  T++C TDL+    KG  P     RI GHE  GVVE VG  V++ +VGD VL    
Sbjct: 30  VKMLKTTICGTDLHIL--KGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCI 87

Query: 91  GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRF--SINGEPVNHFLGTSTFSEYT- 147
             CG C +CR  + + C               G       I+G          T +EY  
Sbjct: 88  SSCGTCGYCRKGLYSHC-------------ESGGWILGNLIDG----------TQAEYVR 124

Query: 148 VVHS-GCVAKINPLAPLDKVCILSCGVSTGL-GATLNVAKPERGSSVAVFGLGAVGLAAA 205
           + H+   + K+      +   +LS  + TG     LN  K + G +VA+ G G VGLAA 
Sbjct: 125 IPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLN-GKVKPGDTVAIVGAGPVGLAAL 183

Query: 206 EGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE 264
             A++   S+II VD    R E AKK G T  VN+++ D    E + E+T+G GVD  +E
Sbjct: 184 LTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGD--AIEQVLELTDGRGVDVVIE 241

Query: 265 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI---NVLNERTLKGTFFGNYKP 321
             G         E V  G G    VGV  K      + +   N+     L  T       
Sbjct: 242 AVGIPATFELCQELVAPG-GHIANVGVHGKPVDLHLEKLWIKNITITTGLVDT------- 293

Query: 322 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 357
               P ++ +  + +L+  K +THR   SEI KA++
Sbjct: 294 -NTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYD 328

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score =  128 bits (323), Expect = 4e-34
 Identities = 111/374 (29%), Positives = 170/374 (45%), Gaps = 54/374 (14%)

Query: 11  EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPL-FPRIFGHEAAG 67
           + G    + +V V  P   EV IK+  TS+C TD+  Y W+   Q+ +  P++ GHE AG
Sbjct: 6   KPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAG 65

Query: 68  VVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRSDVSNMCDLLRINPVRGVMLADG 123
            V  +G GV  ++VGD+V    + E    CG C  CR    ++C   +I           
Sbjct: 66  EVVGIGPGVEGIKVGDYV----SVETHIVCGKCYACRRGQYHVCQNTKI----------- 110

Query: 124 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI---LSCGVSTGLGAT 180
              F ++ +          F+EY VV +  + K     P +   I   L   V T L   
Sbjct: 111 ---FGVDTDGC--------FAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTVL--- 156

Query: 181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 240
              A P  G SV V G G +GL A   A+ +GA  +I  D +  R E AKK G T  VN 
Sbjct: 157 ---AGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNP 213

Query: 241 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM 299
            + D  + + +A++T+G GVD  +E +G    +    + V  G  V++L G+P      +
Sbjct: 214 FKED--VVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLL-GLPPGK---V 267

Query: 300 TKPINVLNERTLKGTFFGNYKPRTDLPS---VVDMYMNKQLELEKFITHRIPFSEINKAF 356
           T  I+  N+   KG        R    +   V  +  + +L+L+  ITH+  F +  K F
Sbjct: 268 T--IDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGF 325

Query: 357 EYMVKGEGLRCIIS 370
           E M  G+  + I+S
Sbjct: 326 ELMRSGQTGKVILS 339

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score =  128 bits (323), Expect = 5e-34
 Identities = 108/378 (28%), Positives = 168/378 (44%), Gaps = 76/378 (20%)

Query: 11  EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE----SKGQTPLFPRIFGHEAA 66
           +A   L + DV V  P   +V IK+K T++C TD++ +     ++   P+ P + GHE  
Sbjct: 8   KAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPV-PMVVGHEFV 66

Query: 67  GVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRSDVSNMCDLLRINPVRGVMLAD 122
           G V  VG  V+  +VGD V    +GE    CG CR+CR+   ++C     N  +GV    
Sbjct: 67  GEVVEVGSEVTGFKVGDRV----SGEGHIVCGHCRNCRAGRRHLC----RN-TKGV---- 113

Query: 123 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI---LSCGVSTGLGA 179
           G          VN       F+EY V+ +  V KI    P D   I       V T L  
Sbjct: 114 G----------VNR---PGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGNAVHTAL-- 158

Query: 180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 239
           + ++     G  V + G G +G+ AA  A+  GA  ++  D +  R E A+K G T  VN
Sbjct: 159 SFDLV----GEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVN 214

Query: 240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 298
            ++ D  +++V+AE+    G D  +E +G         + ++ G  +A+L G+P  D   
Sbjct: 215 VAKED--LRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAML-GIPPGDM-- 269

Query: 299 MTKPIN----VLNERTLKG--------TFFGNYKPRTDLPSVVDMYMNKQLELEKFITHR 346
               I+    +    T+KG        T+   YK       +  +  +  L+L   ITHR
Sbjct: 270 ---AIDWNKVIFKGLTIKGIYGREMFETW---YK-------MSALLQSG-LDLSPIITHR 315

Query: 347 IPFSEINKAFEYMVKGEG 364
            P  +  K FE M  G+ 
Sbjct: 316 FPIDDFQKGFEAMRSGQS 333

Length = 341

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score =  125 bits (317), Expect = 2e-33
 Identities = 82/304 (26%), Positives = 136/304 (44%), Gaps = 36/304 (11%)

Query: 18  IQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVS 77
           +++V    P   EV IK+    +C +DL+ ++        P + GHE +G +  VG  V 
Sbjct: 16  LREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVE 75

Query: 78  DLEVGDHVLPVFTGE-CGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNH 136
             +VGD V+   T   CG C +CR    N+C      P R      G      +G     
Sbjct: 76  GWKVGDRVVSETTFSTCGRCPYCRRGDYNLC------PHR---KGIG---TQADG----- 118

Query: 137 FLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI---LSCGVSTGLGATLNVAKPERGSSVA 193
                 F+EY +V    + ++     L+   +   L+  V     A    +    G +V 
Sbjct: 119 -----GFAEYVLVPEESLHELPENLSLEAAALTEPLAVAVH----AVAERSGIRPGDTVV 169

Query: 194 VFGLGAVGLAAAEGARIAGASRII-GVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA 252
           VFG G +GL AA+ A++ GA+ ++ G ++   R + AK+ G    VN  E D  + E++ 
Sbjct: 170 VFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADA-VNGGEED--LAELVN 226

Query: 253 EMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTL 311
           E+T+G G D  +EC+G +  +  A E +  G G  V VG+    A  +     +  E ++
Sbjct: 227 EITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFGPLAASIDVERIIQKELSV 285

Query: 312 KGTF 315
            G+ 
Sbjct: 286 IGSR 289

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score =  123 bits (311), Expect = 5e-32
 Identities = 82/264 (31%), Positives = 123/264 (46%), Gaps = 54/264 (20%)

Query: 33  IKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG 91
           ++I  T++C +DL+ +   G+T      + GHEA G VE VG  V  L+VGD V+  F  
Sbjct: 30  VRITTTAICGSDLHMYR--GRTGAEPGLVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNV 87

Query: 92  ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS 151
            CG CR+C+  ++ +C  L +NP R      G +   ++  P   + G    +EY  V  
Sbjct: 88  ACGRCRNCKRGLTGVC--LTVNPGR-----AGGAYGYVDMGP---YGGGQ--AEYLRV-- 133

Query: 152 GCVAKINPLAPLDKVCI----------------LSCGVSTGLGATLNVAKPERGSSVAVF 195
                  P A  D   +                LS    TG      +A  + G +VAVF
Sbjct: 134 -------PYA--DFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVF 183

Query: 196 GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT 255
           G G VGL AA  A + GASR+  VD   +R + A+  G    ++ S+ D P+++ I  + 
Sbjct: 184 GAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAIP-IDFSDGD-PVEQ-ILGLE 240

Query: 256 NGGVDRSVECTGNIDNMISAFECV 279
            GGVDR+V+C G        +E  
Sbjct: 241 PGGVDRAVDCVG--------YEAR 256

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score =  120 bits (304), Expect = 3e-31
 Identities = 96/329 (29%), Positives = 138/329 (41%), Gaps = 27/329 (8%)

Query: 33  IKIKYTSLCRTDLYFWESKGQTPL-FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG 91
           I++  T +C +DL+ +  +G +P   P   GHE  GVVE VG  V+ ++ GD V+  F  
Sbjct: 30  IRVVATCVCGSDLWPY--RGVSPTRAPAPIGHEFVGVVEEVGSEVTSVKPGDFVIAPFAI 87

Query: 92  ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS 151
             G C  CR+  +  C         G  +  GQ      GE V   L   T  +     S
Sbjct: 88  SDGTCPFCRAGFTTSCVHGG---FWGAFVDGGQ------GEYVRVPLADGTLVKVPGSPS 138

Query: 152 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIA 211
                +  L  L  V      + TG  A +  A    GS+V V G GAVGL A   A+  
Sbjct: 139 DDEDLLPSLLALSDV------MGTGHHAAV-SAGVRPGSTVVVVGDGAVGLCAVLAAKRL 191

Query: 212 GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNID 270
           GA RII + R   R   A++FG TD V     +  +  V  E+T G G D  +EC G  +
Sbjct: 192 GAERIIAMSRHEDRQALAREFGATDIV-AERGEEAVARVR-ELTGGVGADAVLECVGTQE 249

Query: 271 NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVD 330
           +M  A      G G    VGVP        + +   N   L G   G    R  LP ++D
Sbjct: 250 SMEQAIAIARPG-GRVGYVGVPHGGVELDVRELFFRN-VGLAG---GPAPVRRYLPELLD 304

Query: 331 MYMNKQLELEKFITHRIPFSEINKAFEYM 359
             +  ++   +     +P  E+ + +  M
Sbjct: 305 DVLAGRINPGRVFDLTLPLDEVAEGYRAM 333

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score =  119 bits (301), Expect = 8e-31
 Identities = 95/377 (25%), Positives = 139/377 (36%), Gaps = 88/377 (23%)

Query: 12  AGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF----PRIFGHEAAG 67
           A   L +++     P   EVR+++    +C +DL++++  G         P + GHE +G
Sbjct: 5   AAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQ-HGGFGTVRLREPMVLGHEVSG 63

Query: 68  VVESVGEGVSDLEVGDHV-----LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 122
           VVE+VG GV+ L  G  V      P     CG C +CR+   N+C  +R           
Sbjct: 64  VVEAVGPGVTGLAPGQRVAVNPSRP-----CGTCDYCRAGRPNLCLNMR----------- 107

Query: 123 GQSRFSINGEPVNHFLGTST--------FSEYTVVH-SGCVAKINPLAPLDKVCILSCGV 173
                         FLG++         F EY VV  S CV              L  G+
Sbjct: 108 --------------FLGSAMRFPHVQGGFREYLVVDASQCVP-------------LPDGL 140

Query: 174 STGLGA----------TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 223
           S    A           +N A    G  V V G G +G      AR AGA+ I+  D + 
Sbjct: 141 SLRRAALAEPLAVALHAVNRAGDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLAD 200

Query: 224 KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW 283
                A+  G  + VN +               G  D   E +G    + SA   V  G 
Sbjct: 201 APLAVARAMGADETVNLARDP----LAAYAADKGDFDVVFEASGAPAALASALRVVRPG- 255

Query: 284 GVAVLVGVPSKDAVFMTKPINVL--NERTLKGTF-FGNYKPRTDLPSVVDMYMNKQLELE 340
           G  V VG+          P+N L   E  L+G+F F       +    V +    ++++ 
Sbjct: 256 GTVVQVGMLGGPVPL---PLNALVAKELDLRGSFRFD-----DEFAEAVRLLAAGRIDVR 307

Query: 341 KFITHRIPFSEINKAFE 357
             IT   P  E  +AF 
Sbjct: 308 PLITAVFPLEEAAEAFA 324

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score =  119 bits (301), Expect = 1e-30
 Identities = 104/378 (27%), Positives = 156/378 (41%), Gaps = 62/378 (16%)

Query: 9   AWEAGK-----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK--------GQTP 55
                K      L ++DV V   +  E+ I++K   +C +D++ +E+         G T 
Sbjct: 27  TNLGSKVWRYPELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTE 86

Query: 56  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 115
            FP + GHE +GVVE  G+ V + E GD V       CG CR CRS   N C  L     
Sbjct: 87  -FPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNL----- 140

Query: 116 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL---DK---VCIL 169
                   +  FS +G           F+EY  V++    +IN L  +   DK      L
Sbjct: 141 -------KELGFSADG----------AFAEYIAVNARYAWEINELREIYSEDKAFEAGAL 183

Query: 170 SCGVSTGLGATLNVA---KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF 226
               S             +P  G+ V V+G G +GLAA   A+ AGAS++I  + S +R 
Sbjct: 184 VEPTSVAYNGLFIRGGGFRP--GAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERR 241

Query: 227 EEAKKFGVTDFVNTSE-HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWG 284
             AK+ G     N ++  D    E + E+T G G D  VE  G     I   E      G
Sbjct: 242 NLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAING 301

Query: 285 VAVLVG-----VPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLEL 339
             V +G     VP    V   +   ++  +   G   G +      PSV+ +  + ++++
Sbjct: 302 KIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSG--HGIF------PSVIKLMASGKIDM 353

Query: 340 EKFITHRIPFSEINKAFE 357
            K IT R P   I +A +
Sbjct: 354 TKIITARFPLEGIMEAIK 371

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  115 bits (291), Expect = 2e-29
 Identities = 90/382 (23%), Positives = 139/382 (36%), Gaps = 90/382 (23%)

Query: 11  EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVE 70
           +A   L     E  P    +V IKI Y  +C +DL+   ++     +P + GHE  G+V 
Sbjct: 7   DASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVV 66

Query: 71  SVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSI 129
           +VG  V+  +VGD V +      CG C  C+S     C                +   + 
Sbjct: 67  AVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCP---------------KGVVTY 111

Query: 130 NGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL------NV 183
           NG+  +  +    ++++ VV    V KI           L C      G T+      N 
Sbjct: 112 NGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCA-----GITVYSPLKRNG 166

Query: 184 AKPERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 238
             P  G  V V G+G     AV  A A GA       +    RS  + E+A K G  +F+
Sbjct: 167 VGP--GKRVGVVGIGGLGHLAVKFAKALGA------EVTAFSRSPSKKEDALKLGADEFI 218

Query: 239 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECV---HDGW----------GV 285
            T + +         M         +  G++D +I     V   HD            G 
Sbjct: 219 ATKDPE--------AMK--------KAAGSLDLIID---TVSASHD-LDPYLSLLKPGGT 258

Query: 286 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLEL--EKFI 343
            VLVG P +       P+ +   +++ G+  G  K              + L+   E  I
Sbjct: 259 LVLVGAPEEPLPVPPFPL-IFGRKSVAGSLIGGRK-----------ETQEMLDFAAEHGI 306

Query: 344 THRI---PFSEINKAFEYMVKG 362
              +   P   IN+A E + KG
Sbjct: 307 KPWVEVIPMDGINEALERLEKG 328

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score =  112 bits (283), Expect = 2e-28
 Identities = 80/358 (22%), Positives = 129/358 (36%), Gaps = 77/358 (21%)

Query: 18  IQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ----TPLFPRIFGHEAAGVVESVG 73
           +++     P   +V ++++   +C +DL  + ++G+     P  P   GHE  G V ++G
Sbjct: 9   VEEHPRPTPGPGQVLVRVEGCGVCGSDLPAF-NQGRPWFVYPAEPGGPGHEGWGRVVALG 67

Query: 74  EGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEP 133
            GV  L VGD V                                                
Sbjct: 68  PGVRGLAVGDRVA----------------------------------------------- 80

Query: 134 VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV---AKPERGS 190
               L    F+EY +  +     +  L    +           LG  LNV        G 
Sbjct: 81  ---GLSGGAFAEYDLADADHAVPLPSLLD-GQA-----FPGEPLGCALNVFRRGWIRAGK 131

Query: 191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEV 250
           +VAV G G +GL   + A  AGA R+I +DR   R   A++ G T+ V        I E 
Sbjct: 132 TVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSEA--IVER 189

Query: 251 IAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV--LN 307
           + E+T G G D  +E  G+   +  A E V +  G  V+ G          +P+     N
Sbjct: 190 VRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQDG----PRPVPFQTWN 244

Query: 308 ER--TLKGTFFGNYKPRT-DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG 362
            +   L      + +     +   V +  + +L+L   +TH  P  E+  AFE   + 
Sbjct: 245 WKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRR 302

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  111 bits (281), Expect = 4e-28
 Identities = 75/246 (30%), Positives = 105/246 (42%), Gaps = 30/246 (12%)

Query: 6   AAVAWEAGK----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF 61
           A V  + G     PL + +V V  P   EV IK++   +CRTDL+  E     P  P I 
Sbjct: 3   AMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIP 62

Query: 62  GHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 120
           GHE  G VE+VG GV+   VGD V +P     CG+CR+CRS   N+CD            
Sbjct: 63  GHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCD------------ 110

Query: 121 ADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT 180
                     G  V+       ++EY V        I      ++   L C    G  A 
Sbjct: 111 -----NARFTGYTVD-----GGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRA- 159

Query: 181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 240
           L +A  + G  + ++G GA    A + AR  GA  +    RS +  E A++ G  D+   
Sbjct: 160 LKLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELG-ADWAGD 217

Query: 241 SEHDRP 246
           S+   P
Sbjct: 218 SDDLPP 223

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score =  103 bits (259), Expect = 6e-27
 Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 5/134 (3%)

Query: 199 AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG- 257
            VGLAA + A+  GA+R+I VDRS ++ E AK+ G    +N  + D    E + E+T G 
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDED--FVERVRELTGGR 58

Query: 258 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFG 317
           GVD  ++C G    +  A E +  G G  V+VG+P    V       +L E T+ G+  G
Sbjct: 59  GVDVVIDCVGAPATLEQALELLRPG-GRVVVVGLPGGAPVPFPLRDLLLKELTILGSLGG 117

Query: 318 NYK-PRTDLPSVVD 330
             +     L  +  
Sbjct: 118 GREEFEEALELLAS 131

Length = 131

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score =  102 bits (256), Expect = 7e-27
 Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 22/128 (17%)

Query: 30  EVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVF 89
           EV +++K   +C +DL+ +  +      P I GHE AG+VE VG GV+ L+VGD V+   
Sbjct: 3   EVLVRVKAAGICGSDLHIYRGEPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVVYP 62

Query: 90  TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVV 149
              CG C  CR    N+C   +     GV L DG                   F+EY VV
Sbjct: 63  LIPCGKCAACREGRENLCPNGK---FLGVHL-DG------------------GFAEYVVV 100

Query: 150 HSGCVAKI 157
            +  +  +
Sbjct: 101 PARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  106 bits (267), Expect = 3e-26
 Identities = 88/366 (24%), Positives = 138/366 (37%), Gaps = 62/366 (16%)

Query: 6   AAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFG 62
           A V  E G P  L + +V    P   EV +++K   +   D+   +         P I G
Sbjct: 3   AVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPG 62

Query: 63  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 122
            EAAGVV +VG GV+  +VGD V                               G +  D
Sbjct: 63  SEAAGVVVAVGSGVTGFKVGDRVA----------------------------ALGGVGRD 94

Query: 123 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 182
           G                   ++EY VV +  +  +      ++   L     T   A  +
Sbjct: 95  G------------------GYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFD 136

Query: 183 VAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 241
            A  + G +V V G  G VG AA + A+  GA+ +  V  S K  E  K+ G    +N  
Sbjct: 137 RAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKL-ELLKELGADHVINYR 195

Query: 242 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 300
           E D    E + E+T G GVD  ++  G  D   ++   +  G G  V +G  S       
Sbjct: 196 EED--FVEQVRELTGGKGVDVVLDTVG-GDTFAASLAALAPG-GRLVSIGALSGGPPVPL 251

Query: 301 KPINVLNER-TLKGTFFGNYKPRTDLP---SVVDMYMNKQLELEKFITHRIPFSEINKAF 356
             + +L +R TL+G   G+  P         + D+  + +L+    I    P +E   A 
Sbjct: 252 NLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPV--IDRVYPLAEAPAAA 309

Query: 357 EYMVKG 362
            +++  
Sbjct: 310 AHLLLE 315

Length = 326

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  103 bits (259), Expect = 5e-25
 Identities = 71/241 (29%), Positives = 111/241 (46%), Gaps = 27/241 (11%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           A    E G PL + + +V  P   EV IK++   +C +D +  E       +PR+ GHE 
Sbjct: 3   AVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEV 62

Query: 66  AGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQ 124
            G +++VGEGVS  +VGD V +    G CG C  CR      C+  ++    GV    G 
Sbjct: 63  VGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVT---GVTRDGG- 118

Query: 125 SRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP-LAPLDKVCILSCGVSTGLGATLNV 183
                             ++EY +  +  +A+I   L   +   +L  GV+T      + 
Sbjct: 119 ------------------YAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRNSG 160

Query: 184 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 243
           AKP  G  VAV G+G +G  A + A   G  R + + R S + + A+K G   +++TS+ 
Sbjct: 161 AKP--GDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSKE 217

Query: 244 D 244
           D
Sbjct: 218 D 218

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score =  100 bits (251), Expect = 9e-24
 Identities = 101/374 (27%), Positives = 160/374 (42%), Gaps = 60/374 (16%)

Query: 9   AWEAGK-PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF----PRIFGH 63
           AW  G   L IQ  ++ P    +VR+++K   +C +D+++ ++  +   F    P + GH
Sbjct: 21  AWLVGVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTM-RCADFVVKEPMVIGH 79

Query: 64  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI--NPVRGVMLA 121
           E AG++E VG  V  L VGD V       C  C  C+    N+C  ++    P       
Sbjct: 80  ECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATP------- 132

Query: 122 DGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI--------LSCGV 173
                  ++G   N            VVH   +    P    + V +        LS GV
Sbjct: 133 ------PVHGSLANQ-----------VVHPADLCFKLP----ENVSLEEGAMCEPLSVGV 171

Query: 174 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 233
                A +    PE  ++V V G G +GL     AR  GA RI+ VD   +R   AK+ G
Sbjct: 172 HACRRANIG---PE--TNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLG 226

Query: 234 VTDFVNTSEHDRPIQEVIAEMTN---GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 290
             + V  S +   ++  + E+     GG+D S +C G    M +A E    G G   LVG
Sbjct: 227 ADEIVLVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVG 285

Query: 291 VPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS 350
           +   +   MT P+     R +     G ++ R   P  ++   + +++++  ITHR  FS
Sbjct: 286 MGHNE---MTVPLTPAAAREVD--VVGVFRYRNTWPLCLEFLRSGKIDVKPLITHRFGFS 340

Query: 351 --EINKAFEYMVKG 362
             E+ +AFE   +G
Sbjct: 341 QKEVEEAFETSARG 354

Length = 364

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 99.6 bits (249), Expect = 1e-23
 Identities = 86/366 (23%), Positives = 148/366 (40%), Gaps = 43/366 (11%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAM--EVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIFG 62
           A V    G P +++  ++  P+    EV +++K  +L   DL+      G     P I G
Sbjct: 3   AVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILG 62

Query: 63  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 122
            + AGVVE+VG GV++++ G  V+      CG C +C +   N+C               
Sbjct: 63  SDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCA-------------- 108

Query: 123 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 182
              ++ I GE   H  G   ++EY  V +  +  I      ++         T     + 
Sbjct: 109 ---QYGILGE---HVDG--GYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVT 160

Query: 183 VAKPERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 241
            A+   G +V V G G+ VG AA + A++ GA  +I    S  + E AK+ G  D+V   
Sbjct: 161 RARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELG-ADYVIDY 218

Query: 242 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK 301
             +  ++EV       GVD  VE  G       + + +  G G  V  G  +        
Sbjct: 219 RKEDFVREVRELTGKRGVDVVVEHVGA-ATWEKSLKSLARG-GRLVTCGATTGYEA---- 272

Query: 302 PINV----LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 357
           PI++      + ++ G+  G    + +L     + +  + +L+  I    P  E  +A  
Sbjct: 273 PIDLRHVFWRQLSILGSTMGT---KAELDEA--LRLVFRGKLKPVIDSVFPLEEAAEAHR 327

Query: 358 YMVKGE 363
            +   E
Sbjct: 328 RLESRE 333

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 99.4 bits (248), Expect = 2e-23
 Identities = 90/351 (25%), Positives = 144/351 (41%), Gaps = 50/351 (14%)

Query: 16  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG 75
           L I++  +  P A EVR+K+K   +C +D + +        +PR+ GHE  GV+++VGEG
Sbjct: 12  LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEG 71

Query: 76  VSDLEVGDHVL--PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEP 133
           V    +G+ V   PV +  CG C  C     N+C  L    V GV   DG          
Sbjct: 72  VDAARIGERVAVDPVIS--CGHCYPCSIGKPNVCTSLV---VLGVH-RDG---------- 115

Query: 134 VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVA 193
                    FSEY VV +    +I P A  D+  ++    +     T     P       
Sbjct: 116 --------GFSEYAVVPAKNAHRI-PDAIADQYAVMVEPFTIAANVTGRT-GPTEQDVAL 165

Query: 194 VFGLGAVGLAAAEG-ARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA 252
           ++G G VGL   +    +     +I  DR  +R   AK+ G    +N ++   P+ E + 
Sbjct: 166 IYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQE--PLGEALE 223

Query: 253 EMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM---TKPINVLNER 309
           E       + ++ T  ID       C       AV +  P+   V M   ++P  ++ ++
Sbjct: 224 E-------KGIKPTLIIDAA-----CHPSILEEAVTLASPAARIVLMGFSSEPSEIV-QQ 270

Query: 310 TLKGTFFGNYKPRTD---LPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 357
            + G     +  R +    P V+D      ++ EK ITH   F  +  A E
Sbjct: 271 GITGKELSIFSSRLNANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIE 321

Length = 339

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 98.4 bits (245), Expect = 2e-23
 Identities = 77/282 (27%), Positives = 113/282 (40%), Gaps = 37/282 (13%)

Query: 60  IFGHEAAGVVESVGEGVSD------LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 113
           + GHE  G V ++  G +       L +G  V+   T  CG C  CR  +   CD LR  
Sbjct: 1   VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLR-- 58

Query: 114 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI-LSCG 172
                    G                +  ++E+  + +G      P    D V     C 
Sbjct: 59  -------KYGHEALDSGWPL------SGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCA 105

Query: 173 VSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF 232
            +T + A L  A   +G  V V G G +GL AA  A  AGA+R++  D S  R E A  F
Sbjct: 106 TATVM-AALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSF 164

Query: 233 GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 292
           G T     +E +   +         GVD ++E +G    + +  E +  G G AVL G  
Sbjct: 165 GATA---LAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAG-- 218

Query: 293 SKDAVFMTKPINVLNERTLKG--TFFG--NYKPRTDLPSVVD 330
              +VF   P+ +  E+ ++   T  G  NY+PR  L   V 
Sbjct: 219 ---SVFPGGPVALDPEQVVRRWLTIRGVHNYEPR-HLDQAVR 256

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 98.2 bits (245), Expect = 4e-23
 Identities = 73/267 (27%), Positives = 106/267 (39%), Gaps = 40/267 (14%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           A +     +   I++V    P   EV IK+ Y  LC  DL   +       +P I GHE 
Sbjct: 3   AVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEV 62

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
            G VE VGE V   + GD V  +     G C +CRS     C                ++
Sbjct: 63  VGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYC----------------KN 106

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           R    GE ++ F     F+EY  V    + K+ P    +   I+ C         L  A 
Sbjct: 107 RLGY-GEELDGF-----FAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRG-LRRAG 159

Query: 186 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT---- 240
            ++G +V V G  G VG+ A + A+  GA ++I V  S  + +   K+   D+V      
Sbjct: 160 VKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKYA--DYVIVGSKF 216

Query: 241 SEHDRPIQEVIAEMTNGGVDRSVECTG 267
           SE  + I         GG D  +E  G
Sbjct: 217 SEEVKKI---------GGADIVIETVG 234

Length = 334

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 93.8 bits (234), Expect = 1e-21
 Identities = 71/365 (19%), Positives = 127/365 (34%), Gaps = 74/365 (20%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAM--EVRIKIKYTSLCRTDLYFWESKGQTPL---FPRI 60
           A    E G P +++  +V  P+    EV +K+    +   DL   E   +       P I
Sbjct: 3   AVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLI 62

Query: 61  FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 120
            GH+ AGVV +VG GV+  +VGD V                                   
Sbjct: 63  PGHDVAGVVVAVGPGVTGFKVGDEVF---------------------------------- 88

Query: 121 ADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP--LAPLDKVCILSCGVSTGLG 178
             G + F+  G           ++EY VV +  +A   P  L+  +   +   G+ T   
Sbjct: 89  --GMTPFTRGG----------AYAEYVVVPADELALK-PANLSFEEAAALPLAGL-TAWQ 134

Query: 179 ATLNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 237
           A   +   + G +V + G  G VG  A + A+  GA R+I    ++   +  +  G  + 
Sbjct: 135 ALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAANA-DFLRSLGADEV 192

Query: 238 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 297
           ++ ++      +       GGVD  ++  G  + +  +   V  G     LV +      
Sbjct: 193 IDYTK-----GDFERAAAPGGVDAVLDTVGG-ETLARSLALVKPG---GRLVSIAG---- 239

Query: 298 FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 357
                      R ++  F         L  + ++    +L     +    P  +  +A E
Sbjct: 240 -PPPAEQAAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRP--VVDRVFPLEDAAEAHE 296

Query: 358 YMVKG 362
            +  G
Sbjct: 297 RLESG 301

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 93.1 bits (232), Expect = 1e-21
 Identities = 74/313 (23%), Positives = 111/313 (35%), Gaps = 79/313 (25%)

Query: 56  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 115
             P   G+ + G V  VG GV+  + GD    VF        H                 
Sbjct: 19  PLPLPPGYSSVGRVVEVGSGVTGFKPGDR---VFCF----GPH----------------- 54

Query: 116 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 175
                                       +E  VV +  +  +    P +          T
Sbjct: 55  ----------------------------AERVVVPANLLVPLPDGLPPE------RAALT 80

Query: 176 GLGAT-LN---VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 231
            L AT LN    A+P  G  VAV GLG VGL AA+ A+ AGA  ++GVD  + R E A+ 
Sbjct: 81  ALAATALNGVRDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEA 140

Query: 232 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV 291
            G  D V          +   E+   G D  +E +G+   + +A   + D  G  VLVG 
Sbjct: 141 LGPADPVA--------ADTADEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGW 191

Query: 292 PSKDAVFMTKPINVLNERTLKGT---FFGNYKPRTDLPSVVDMYMNKQL----ELEKFIT 344
                + + +  +      ++ +     G Y          ++     L     LE  IT
Sbjct: 192 YGLKPLLLGEEFH-FKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEALIT 250

Query: 345 HRIPFSEINKAFE 357
           HR+PF +  +A+ 
Sbjct: 251 HRVPFEDAPEAYR 263

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 92.6 bits (231), Expect = 4e-21
 Identities = 86/381 (22%), Positives = 136/381 (35%), Gaps = 74/381 (19%)

Query: 4   TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK--GQTPLFPRIF 61
            AA +    G  L++ DV V  P   EV +K+K  +L   D   W+ +  G  P +P I 
Sbjct: 2   KAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVD---WKHQDYGFIPSYPAIL 58

Query: 62  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 121
           G + AG V  VG GV+  +VGD V        G                           
Sbjct: 59  GCDFAGTVVEVGSGVTRFKVGDRV-------AGFVHGGNP-------------------- 91

Query: 122 DGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST---GLG 178
                         +      F EY V  +   AKI      ++   L  G+ T    L 
Sbjct: 92  --------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALF 137

Query: 179 ATLNVAKP-------ERGSSVAVFGLG--AVGLAAAEGARIAGASRIIGVDRSSKRFEEA 229
             L +  P        +G  V ++G G  +VG  A + A++AG  ++I    S K F+  
Sbjct: 138 QKLGLPLPPPKPSPASKGKPVLIWG-GSSSVGTLAIQLAKLAGY-KVITT-ASPKNFDLV 194

Query: 230 KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWG--VAV 287
           K  G     +   HD  + E I   T G +  +++C    ++     E +    G  +  
Sbjct: 195 KSLGADAVFDY--HDPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVS 252

Query: 288 LVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI 347
           L+ VP +          V  +  L  T FG      +   V   Y+ + LE  K   H +
Sbjct: 253 LLPVPEETE----PRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPV 308

Query: 348 P-----FSEINKAFEYMVKGE 363
                    + +  + + KG+
Sbjct: 309 RVVEGGLEGVQEGLDLLRKGK 329

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score = 90.9 bits (226), Expect = 2e-20
 Identities = 93/372 (25%), Positives = 147/372 (39%), Gaps = 66/372 (17%)

Query: 18  IQDVEVAPPQAMEVRIKIKYTSLCRTDL-------YFWESKGQTPLF--PRIFGHEAAGV 68
           +++V V  P   E+ +K++   +C  D+        FW  + Q P    P I GHE  G 
Sbjct: 14  LEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGR 73

Query: 69  VESVGEGVSD--LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI----NPVRGVMLAD 122
           V  +GEG  +  ++VGD V+      C +CR C      MC    +    N V G M   
Sbjct: 74  VVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGM--- 130

Query: 123 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI---LSCGVSTGLGA 179
                    E +        F +  +VH     K+    P +   +   L+C +      
Sbjct: 131 --------AEYM-------RFPKEAIVH-----KVPDDIPPEDAILIEPLACALH----- 165

Query: 180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 239
            ++ A  +    V + G G +GL     AR+    ++I +D   +R   A+KFG    +N
Sbjct: 166 AVDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLN 225

Query: 240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNID------NMISAFECVHDGWGVAVLVGVP 292
             E D  + E I E+T G G D  +E TG+        NMI          G  V   V 
Sbjct: 226 PPEVD--VVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-------GRFVEFSVF 276

Query: 293 SKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI 352
                     I    E  + G+  G Y      P  +D+  + +L  +  +TH+ P  + 
Sbjct: 277 GDPVTVDWSIIGDRKELDVLGSHLGPYC----YPIAIDLIASGRLPTDGIVTHQFPLEDF 332

Query: 353 NKAFEYMVKGEG 364
            +AFE M +G+ 
Sbjct: 333 EEAFELMARGDD 344

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 90.4 bits (225), Expect = 3e-20
 Identities = 70/258 (27%), Positives = 104/258 (40%), Gaps = 58/258 (22%)

Query: 11  EAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-SKGQTPLFPRIFGHEAAG 67
           + G P  L I+++ V  P A EV I+++   L R D  F   +  + P  P   G+EAAG
Sbjct: 8   QFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAG 67

Query: 68  VVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRF 127
           VVE+VG GV+   VGD V  +                                       
Sbjct: 68  VVEAVGAGVTGFAVGDRVSVIPA------------------------------------- 90

Query: 128 SINGEPVNHFLGTS-TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS--TGLGATLNVA 184
                     LG   T++EY +V +  V K+     L  V   +  +   T  GA + +A
Sbjct: 91  --------ADLGQYGTYAEYALVPAAAVVKLPDG--LSFVEAAALWMQYLTAYGALVELA 140

Query: 185 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 243
               G SV +     +VGLAA + A  AGA  +I   R+S++ +     G    + T E 
Sbjct: 141 GLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTDEE 199

Query: 244 DRPIQEVIAEMTNG-GVD 260
           D  +   +  +T G GVD
Sbjct: 200 D--LVAEVLRITGGKGVD 215

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 85.7 bits (212), Expect = 1e-18
 Identities = 89/360 (24%), Positives = 151/360 (41%), Gaps = 46/360 (12%)

Query: 11  EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDL-YFWESKGQTPLFPRIFGHEAAGVV 69
           E GKP++   VE+    A +V +K+    +C TDL Y++         P   GHE +G V
Sbjct: 6   EPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRV 65

Query: 70  ESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSI 129
              G G +   +G  V+      CG+C  C++    +C   R   + G  +  G      
Sbjct: 66  IQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTIC---RAQKMPGNDMQGG------ 115

Query: 130 NGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLA----PLDKVCILSCGVSTGLGATLNV 183
                        F+ + VV +   CV     LA    PL+ V +++  V+T   A +  
Sbjct: 116 -------------FASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQ- 161

Query: 184 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 243
           A  ++G  V V G G VG    + A+  GA+ ++ +D   ++ E  K FG    +N  + 
Sbjct: 162 AGLKKGDLVIVIGAGGVGGYMVQTAKAMGAA-VVAIDIDPEKLEMMKGFGADLTLNPKDK 220

Query: 244 D-RPIQEVIAEMTNGGVDRS-----VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 297
             R ++++I         RS      EC+G+     SA   +  G G  V+VG       
Sbjct: 221 SAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAKTE 279

Query: 298 FMTKPINVLNERTLKGTFFGNYKPRTDL-PSVVDMYMNKQLELEKFITHRIPFSEINKAF 356
           +    +   + R L     GN+    D  P+ +D+ ++ +++L  F+  R P  +I   F
Sbjct: 280 YRLSNLMAFHARAL-----GNWGCPPDRYPAALDLVLDGKIQLGPFVERR-PLDQIEHVF 333

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 85.7 bits (213), Expect = 1e-18
 Identities = 92/358 (25%), Positives = 142/358 (39%), Gaps = 63/358 (17%)

Query: 16  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPRIFGHEAAGVVESV 72
           L + +  V  P   EV +++   SL   DL      G+ P     P I   + AG V +V
Sbjct: 15  LKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLI--LNGRYPPPVKDPLIPLSDGAGEVVAV 72

Query: 73  GEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSR---FSI 129
           GEGV+  +VGD V+P F                       N + G   A+ ++      I
Sbjct: 73  GEGVTRFKVGDRVVPTF---------------------FPNWLDGPPTAEDEASALGGPI 111

Query: 130 NGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG 189
           +G            +EY V+    + +       ++   L C   T   A   +   + G
Sbjct: 112 DG----------VLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPG 161

Query: 190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQE 249
            +V V G G V L A + A+ AGA R+I    S ++ E AK  G    +N        +E
Sbjct: 162 DTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRTTPDWGEE 220

Query: 250 VIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-- 306
           V+ ++T G GVD  VE  G    +  + + V  G GV  L+G  S        P+ +L  
Sbjct: 221 VL-KLTGGRGVDHVVE-VGGPGTLAQSIKAVAPG-GVISLIGFLSGFEA----PVLLLPL 273

Query: 307 --NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF---ITHRIPFSEINKAFEYM 359
                TL+G   G+   R    +     MN+ +E  +    I    PF E  +A+ Y+
Sbjct: 274 LTKGATLRGIAVGS---RAQFEA-----MNRAIEAHRIRPVIDRVFPFEEAKEAYRYL 323

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 85.5 bits (212), Expect = 1e-18
 Identities = 92/367 (25%), Positives = 156/367 (42%), Gaps = 53/367 (14%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLY-----FWESKGQTPLFPRI 60
           AAV  +     ++ +  + P +  E  +K++Y  +C TDL+     F +  G      RI
Sbjct: 3   AAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGDKTG------RI 56

Query: 61  FGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 119
            GHE  G+V+ VG GV+ L+VGD V +  F   CG C +C +    +C        R V 
Sbjct: 57  LGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLC--------RSVK 108

Query: 120 LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI-NPLAPLDKVCILSCGVSTGLG 178
            A     ++++G            +E  +V +    K+   L P     I   GV+T   
Sbjct: 109 NAG----YTVDG----------GMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTT--Y 152

Query: 179 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 238
             + V+  + G  +A++G G +G  A + A+    +++I VD +  +   AK+ G    +
Sbjct: 153 KAIKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTI 212

Query: 239 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 298
           N+   +  + ++I E   GG   +V           A + V  G G  V VG+P  +++ 
Sbjct: 213 NSKRVE-DVAKIIQE-KTGGAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPP-ESMD 268

Query: 299 MTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELE---KFITHRIPFSEINKA 355
           ++ P  VL+   + G+  G    R DL          Q   E          P  +IN  
Sbjct: 269 LSIPRLVLDGIEVVGSLVGT---RQDLEEAF------QFGAEGKVVPKVQLRPLEDINDI 319

Query: 356 FEYMVKG 362
           F+ M +G
Sbjct: 320 FDEMEQG 326

Length = 338

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 80.3 bits (198), Expect = 8e-17
 Identities = 81/333 (24%), Positives = 130/333 (39%), Gaps = 55/333 (16%)

Query: 30  EVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVF 89
           +V +K+  + LC +D+      G    +P   GHE +G VE+VG GV DL  GD V  V 
Sbjct: 27  DVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLHPGDAVACVP 85

Query: 90  TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTF---SEY 146
              C  C  C     ++C                             F+G+      +EY
Sbjct: 86  LLPCFTCPECLRGFYSLCAKY-------------------------DFIGSRRDGGNAEY 120

Query: 147 TVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAE 206
            VV    +  +    P++    +   ++ GL A  ++A+   G +V + G G +GL A +
Sbjct: 121 IVVKRKNLFALPTDMPIEDGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQ 178

Query: 207 GARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP-IQEVIAE-------MTNGG 258
            A   GA  +  +D +S++   AK  G     N+ E   P IQ V+ E       +   G
Sbjct: 179 CAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLRELRFDQLILETAG 238

Query: 259 VDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL--NERTLKGTFF 316
           V ++VE    I    +             LVG    D    +     +   E T+ G++ 
Sbjct: 239 VPQTVELAIEIAGPRAQL----------ALVGTLHHDLHLTSATFGKILRKELTVIGSWM 288

Query: 317 GNYK---PRTDLPSVVDMYMNKQLELEKFITHR 346
            NY    P  +  +   +   ++L LE  I HR
Sbjct: 289 -NYSSPWPGQEWETASRLLTERKLSLEPLIAHR 320

Length = 347

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 76.1 bits (188), Expect = 2e-15
 Identities = 77/369 (20%), Positives = 125/369 (33%), Gaps = 71/369 (19%)

Query: 7   AVAWEAGKP--LIIQDVEVAPPQAM--EVRIKIKYTSLCRTDLYFWESKGQTPL---FPR 59
            V    G P  L++ +VEV  P     EV +K+   S+   D        +  L   FP 
Sbjct: 1   VVYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPP 60

Query: 60  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 119
           I G + AG V +VG GV+  +VGD V     G                         G  
Sbjct: 61  IPGMDFAGEVVAVGSGVTRFKVGDEVF----GRLPPKGG------------------G-- 96

Query: 120 LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP-LAPLDKVCILSCGVSTGLG 178
                                   +EY V     +AK    ++  +   +   G+ T L 
Sbjct: 97  ----------------------ALAEYVVAPESGLAKKPEGVSFEEAAALPVAGL-TALQ 133

Query: 179 ATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 237
           A  +  K + G  V + G  G VG  A + A+  GA  + GV  S++  E  +  G  + 
Sbjct: 134 ALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVC-STRNAELVRSLGADEV 191

Query: 238 VNTSEHDRPIQEVIAEMTNGGV-DRSVECTGNIDNMISAFECVHDGW--GVAVLVGVPSK 294
           ++ +  D      +A    G   D   +  GN     S +         G  V VG    
Sbjct: 192 IDYTTED-----FVALTAGGEKYDVIFDAVGNSP--FSLYRASLALKPGGRYVSVGGGPS 244

Query: 295 DAVFMTKPINVLNERTLKGTFFGNYKP-RTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 353
             + +   + +      +   F   KP   DL  + ++    +L+    I    P  +  
Sbjct: 245 GLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKP--VIDSVYPLEDAP 302

Query: 354 KAFEYMVKG 362
           +A+  +  G
Sbjct: 303 EAYRRLKSG 311

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 75.3 bits (186), Expect = 3e-15
 Identities = 89/386 (23%), Positives = 130/386 (33%), Gaps = 88/386 (22%)

Query: 6   AAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 63
           A    E G P  L + D+ V  P   EV +++  + +   D Y                 
Sbjct: 3   AIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPG 62

Query: 64  -EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 122
            + AGVVE+VGEGV  L+VGD    V+    G  R                         
Sbjct: 63  SDGAGVVEAVGEGVDGLKVGD---RVWLTNLGWGRR------------------------ 95

Query: 123 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 182
                              T +EY VV            P D++  L  GVS   GA L 
Sbjct: 96  -----------------QGTAAEYVVV------------PADQLVPLPDGVSFEQGAALG 126

Query: 183 V------------AKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA 229
           +            A  + G +V V G  GAVG AA + AR AGA R+I    S++  E  
Sbjct: 127 IPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELV 185

Query: 230 KKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVL 288
           ++ G     N    D  + + I   T G GVD  +E   N  N+    + +  G  + V 
Sbjct: 186 RQAGADAVFNYRAED--LADRILAATAGQGVDVIIEVLAN-VNLAKDLDVLAPGGRIVVY 242

Query: 289 VGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTD-----LPSVVDMYMNKQLELEKFI 343
                +  +    PIN L  +         Y    +       ++     +  L     I
Sbjct: 243 GSGGLRGTI----PINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPV--I 296

Query: 344 THRIPFSEINKAFEYMVKGEGLRCII 369
               P  E   A E +  G  +  ++
Sbjct: 297 AREYPLEEAAAAHEAVESGGAIGKVV 322

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 74.9 bits (185), Expect = 5e-15
 Identities = 102/392 (26%), Positives = 144/392 (36%), Gaps = 81/392 (20%)

Query: 7   AVAWEAGKP-LIIQDVEVAPPQAMEVRIKIKYTSLCRTD------LYFWESKGQTPLFPR 59
           A+A + GKP + + D+    P   EV ++     +C TD       Y     G+  L   
Sbjct: 3   AIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFL--- 59

Query: 60  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMC---DLLRINPVR 116
           + GHEA GVVE VG+G S L  GD V+P      G C +CR    + C   +       R
Sbjct: 60  VLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT----ER 114

Query: 117 GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 176
           G+    G  R     +P           EY V       K+ P   L  V +L       
Sbjct: 115 GIKGLHGFMREYFVDDP-----------EYLV-------KVPP--SLADVGVL------- 147

Query: 177 LGATLNVAK-------------PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 223
           L     V K                     V G G +GL AA   R+ G   +  ++R  
Sbjct: 148 LEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRD 206

Query: 224 KRFEEAK---KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 280
               +A    + G T +VN+S+   P+ EV      G  D  +E TG       A   + 
Sbjct: 207 PPDPKADIVEELGAT-YVNSSKT--PVAEVKLV---GEFDLIIEATGVPPLAFEALPALA 260

Query: 281 DGWGVAVLVGVPSKDAVFM--TKPIN---VLNERTLKGTFFGNYKPRTDLPSVVDMY--M 333
              GV +L GVP     F      +N   VL  + L G+   N   +      V+     
Sbjct: 261 PN-GVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNAN---KRHFEQAVEDLAQW 316

Query: 334 NKQLE--LEKFITHRIPFSEINKAFEYMVKGE 363
             +    LE+ IT R+P  E  +A      GE
Sbjct: 317 KYRWPGVLERLITRRVPLEEFAEALTEKPDGE 348

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 74.5 bits (184), Expect = 7e-15
 Identities = 71/260 (27%), Positives = 103/260 (39%), Gaps = 57/260 (21%)

Query: 6   AAVAWEAGKPLIIQDVEVAP-PQAM-EVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFG 62
           A V  E G P  +   EV P P A  EVRI+++   +   DL   + K Q  P  P + G
Sbjct: 3   AVVCKELGGPEDLVLEEVPPEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPG 62

Query: 63  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 122
            E AGVVE+VGEGV+  +VGD V                                     
Sbjct: 63  SEVAGVVEAVGEGVTGFKVGDRV-------VA---------------------------- 87

Query: 123 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 182
                           G   F+E  VV +  V  +      ++   L     T   A + 
Sbjct: 88  --------------LTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVR 133

Query: 183 VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 241
            A+ + G +V V G  G VGLAA + A+  GA R+I    S ++   A+  G    ++  
Sbjct: 134 RARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVIDYR 192

Query: 242 EHDRPIQEVIAEMTNG-GVD 260
           + D  ++E +  +T G GVD
Sbjct: 193 DPD--LRERVKALTGGRGVD 210

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 74.4 bits (183), Expect = 9e-15
 Identities = 91/346 (26%), Positives = 143/346 (41%), Gaps = 56/346 (16%)

Query: 30  EVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPV 88
           +V IK+ Y  +C TDL+  ++      +P + GHE  G V  VG  VS   VGD V + V
Sbjct: 36  DVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGV 95

Query: 89  FTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTV 148
             G CG+C  C+SD+   C+  RI     V           +G+P         F+   V
Sbjct: 96  IVGCCGECSPCKSDLEQYCN-KRIWSYNDVY---------TDGKPTQ-----GGFASAMV 140

Query: 149 VHSGCVAKI-NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEG 207
           V    V KI   +AP     +L  GV T      +    + G    + GLG VG    + 
Sbjct: 141 VDQKFVVKIPEGMAPEQAAPLLCAGV-TVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKI 199

Query: 208 ARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 266
           A+  G   +  +  S K+ EEA +  G  D++ +S+         AEM         E  
Sbjct: 200 AKAMG-HHVTVISSSDKKREEALEHLGADDYLVSSD--------AAEMQ--------EAA 242

Query: 267 GNIDNMISAFECVH-----------DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTF 315
            ++D +I      H           D  G  +L+GV +    F+T P+ +L  + + G+F
Sbjct: 243 DSLDYIIDTVPVFHPLEPYLSLLKLD--GKLILMGVINTPLQFVT-PMLMLGRKVITGSF 299

Query: 316 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVK 361
            G+ K   +   +++    K L     +   +    +N AFE + K
Sbjct: 300 IGSMK---ETEEMLEFCKEKGL---TSMIEVVKMDYVNTAFERLEK 339

Length = 357

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 73.4 bits (181), Expect = 1e-14
 Identities = 91/364 (25%), Positives = 137/364 (37%), Gaps = 72/364 (19%)

Query: 7   AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAA 66
           A+  + G  L ++D+    P   E  +++    +C TDL  +  KG  P FP + GHE  
Sbjct: 3   ALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIY--KGYYP-FPGVPGHEFV 59

Query: 67  GVVESVGEG--VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQ 124
           G+VE   E   V    VG+  +      CG C +CR  +   C      P R V+   G 
Sbjct: 60  GIVEEGPEAELVGKRVVGEINIA-----CGRCEYCRRGLYTHC------PNRTVL---GI 105

Query: 125 SRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG-------L 177
                +G           F+EY               PL+ + ++   V          L
Sbjct: 106 VDR--DG----------AFAEYLT------------LPLENLHVVPDLVPDEQAVFAEPL 141

Query: 178 GATLNV---AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 234
            A L +        G  VAV G G +GL  A+   + G   ++ V R S++   A++ GV
Sbjct: 142 AAALEILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGV 200

Query: 235 TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 294
                       +    AE   GG D  VE TG+   +  A   V    G  VL    + 
Sbjct: 201 E----------TVLPDEAESEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAG 249

Query: 295 DAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINK 354
            A F      V+NE TL G+  G           + +     ++++  IT   P  E  +
Sbjct: 250 PASFDLTKA-VVNEITLVGSRCG------PFAPALRLLRKGLVDVDPLITAVYPLEEALE 302

Query: 355 AFEY 358
           AFE 
Sbjct: 303 AFER 306

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 71.9 bits (177), Expect = 4e-14
 Identities = 70/303 (23%), Positives = 110/303 (36%), Gaps = 60/303 (19%)

Query: 9   AWEAGKP-----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 63
           AW   KP     L ++++E+  P A EV +K+    L   D            +P + G 
Sbjct: 3   AWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGV 62

Query: 64  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 123
           + AGVV +VG  V+  +VGD V                                 +   G
Sbjct: 63  DGAGVVVAVGAKVTGWKVGDRVA----------------------------YHASLARGG 94

Query: 124 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 183
                             +F+EYTVV +  V  +      ++   L C   T   A    
Sbjct: 95  ------------------SFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKK 136

Query: 184 AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 242
            + E G ++ + G  G VG  A + A+ AG  R+I    S + FE  K  G    ++   
Sbjct: 137 LRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVI-TTCSKRNFEYVKSLGADHVID--Y 192

Query: 243 HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP--SKDAVFM 299
           +D  + E I E+T G GVD  ++  G  +   +    +     +  + G P  S D  F 
Sbjct: 193 NDEDVCERIKEITGGRGVDAVLDTVGG-ETAAALAPTLAFNGHLVCIQGRPDASPDPPFT 251

Query: 300 TKP 302
              
Sbjct: 252 RAL 254

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 71.4 bits (175), Expect = 9e-14
 Identities = 72/247 (29%), Positives = 113/247 (45%), Gaps = 29/247 (11%)

Query: 31  VRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT 90
           V +K+  T++C +D +    +   P    + GHE  G V   G  V  +++GD V   F 
Sbjct: 36  VILKVVTTNICGSDQHMVRGRTTAPT-GLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFN 94

Query: 91  GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVH 150
             CG CR+C+   + +C  L +NP R    A     +   G     ++G    SEY +V 
Sbjct: 95  IACGRCRNCKEGHTGVC--LNVNPAR----AGAAYGYVDMGG----WVGGQ--SEYVMVP 142

Query: 151 SGCVAKINPLAPLDK---------VCILSCGVSTGL-GATLNVAKPERGSSVAVFGLGAV 200
               A  N L   D+         + +LS    TG  GA      P  GS+V + G G V
Sbjct: 143 ---YADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGAVTAGVGP--GSTVYIAGAGPV 197

Query: 201 GLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD 260
           GLAAA  A++ GA+ +I  D +  R  +A+ FG  + V+ S+     +++   +    VD
Sbjct: 198 GLAAAASAQLLGAAVVIVGDLNPARLAQARSFGC-ETVDLSKDATLPEQIEQILGEPEVD 256

Query: 261 RSVECTG 267
            +V+C G
Sbjct: 257 CAVDCVG 263

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 70.4 bits (173), Expect = 1e-13
 Identities = 73/366 (19%), Positives = 123/366 (33%), Gaps = 67/366 (18%)

Query: 13  GKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPR--------IF 61
             PL+++DV    P   +V +K+    +C +DL+              P         + 
Sbjct: 8   DGPLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVL 67

Query: 62  GHEAAGVVESVGEGVS-DLEVGDHV--LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGV 118
           GHE  G V   G G    L+VG  V  LP+    CG    C   +S              
Sbjct: 68  GHEFCGEVVDYGPGTERKLKVGTRVTSLPLLL--CGQGASCGIGLSPE------------ 113

Query: 119 MLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 178
                    +  G           ++EY ++    + ++     ++   +    ++ GL 
Sbjct: 114 ---------APGG-----------YAEYMLLSEALLLRVPDGLSMEDAALTE-PLAVGLH 152

Query: 179 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 238
           A +  A+   G    V G G +GLA     +  G   I+  D S +R   A   G    V
Sbjct: 153 A-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVV 211

Query: 239 NTSEHDRPIQEVIAEMTNGGVDRSV--ECTGNIDNMISAFECVHDGWGVAVLVGV-PSKD 295
           + +               GG   +V  EC G    +    E    G G  V+VGV    D
Sbjct: 212 DPAADSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESD 270

Query: 296 AVF----MTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSE 351
            +     + K + +         F   Y P  +    +D     ++++   +T  +    
Sbjct: 271 NIEPALAIRKELTL--------QFSLGYTPE-EFADALDALAEGKVDVAPMVTGTVGLDG 321

Query: 352 INKAFE 357
           +  AFE
Sbjct: 322 VPDAFE 327

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 68.2 bits (168), Expect = 8e-13
 Identities = 89/387 (22%), Positives = 137/387 (35%), Gaps = 114/387 (29%)

Query: 6   AAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFG 62
           A    + G P  L  +DV V  P   EV ++     +   D YF    G  PL  P + G
Sbjct: 2   AVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYF--RSGLYPLPLPFVLG 59

Query: 63  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 122
            E AGVVE+VG GV+  +VGD V   + G                               
Sbjct: 60  VEGAGVVEAVGPGVTGFKVGDRV--AYAG------------------------------- 86

Query: 123 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL- 181
                               ++EY VV +  + K+              G+S    A L 
Sbjct: 87  ----------------PPGAYAEYRVVPASRLVKLPD------------GISDETAAALL 118

Query: 182 -----------NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA 229
                           + G +V V    G VGL   + A+  GA  +IG   S ++ E A
Sbjct: 119 LQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELA 177

Query: 230 KKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVL 288
           +  G    +N  + D    E + E+T G GVD   +  G  D    + + +    G  V 
Sbjct: 178 RAAGADHVINYRDED--FVERVREITGGRGVDVVYDGVG-KDTFEGSLDSLRPR-GTLVS 233

Query: 289 VG-----VP-------SKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPS----VVDMY 332
            G     VP       SK ++F+T+P           + F     R +L +    + D  
Sbjct: 234 FGNASGPVPPFDLLRLSKGSLFLTRP-----------SLFHYIATREELLARAAELFDAV 282

Query: 333 MNKQLELEKFITHRIPFSEINKAFEYM 359
            + +L++E  I  R P ++  +A   +
Sbjct: 283 ASGKLKVE--IGKRYPLADAAQAHRDL 307

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 67.0 bits (164), Expect = 2e-12
 Identities = 59/212 (27%), Positives = 86/212 (40%), Gaps = 32/212 (15%)

Query: 16  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG 75
           L ++DV+   P   EV I++K   +   D     +    P+ P I G E AGVVE VG+ 
Sbjct: 14  LKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVKPM-PHIPGAEFAGVVEEVGDH 72

Query: 76  VSDLEVGDHVL---PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGE 132
           V  ++ GD V+    VF    G C  C S    +C     N     ++++G         
Sbjct: 73  VKGVKKGDRVVVYNRVF---DGTCDMCLSGNEMLCR----NGGIIGVVSNG--------- 116

Query: 133 PVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 192
                     ++EY VV    + KI      +    L     T   A L  A    G +V
Sbjct: 117 ---------GYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHA-LKTAGLGPGETV 166

Query: 193 AVFGL-GAVGLAAAEGARIAGASRIIGVDRSS 223
            VFG  G  G+ A + A++ GA  +I V R  
Sbjct: 167 VVFGASGNTGIFAVQLAKMMGA-EVIAVSRKD 197

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 65.3 bits (159), Expect = 9e-12
 Identities = 54/217 (24%), Positives = 87/217 (40%), Gaps = 22/217 (10%)

Query: 30  EVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPV 88
           +V +KI Y  +C +DL+  +++     +P + GHE  G+V  +G+ V   + GD V + V
Sbjct: 39  DVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGV 98

Query: 89  FTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYT- 147
             G C  C  C  D+ N C                +  F+ N    +   GT  +  Y+ 
Sbjct: 99  IVGSCKSCESCDQDLENYCP---------------KMIFTYNSIGHD---GTKNYGGYSD 140

Query: 148 --VVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAA 205
             VV    V +     PLD    L C   T           E G  + V GLG +G  A 
Sbjct: 141 MIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAV 200

Query: 206 EGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 242
           +  +  G    +    S+K  E   + G   F+ +++
Sbjct: 201 KIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTD 237

Length = 360

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 63.9 bits (155), Expect = 3e-11
 Identities = 79/338 (23%), Positives = 136/338 (40%), Gaps = 35/338 (10%)

Query: 30  EVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPV 88
           +V +KI +  +C +DL+  ++      +P I GHE  G+   VG+ V+  + GD V + V
Sbjct: 33  DVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGV 92

Query: 89  FTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTV 148
             G C  C  C  D+ N C                +  F+ N    +       +S+  V
Sbjct: 93  IIGSCQSCESCNQDLENYCP---------------KVVFTYNSRSSDGTRNQGGYSDVIV 137

Query: 149 VHSGCVAKINPLAPLDKVCILSC-GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEG 207
           V    V  I    P D    L C G++            E G  + V GLG +G  A + 
Sbjct: 138 VDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKI 197

Query: 208 ARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 266
            +  G  R+  + RSS++  EA  + G   F+ T++  +  + V      G +D  ++  
Sbjct: 198 GKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAV------GTMDFIIDTV 250

Query: 267 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLP 326
                ++  F  +    G  V +G+P K       P+ VL  + + G+  G  K   ++ 
Sbjct: 251 SAEHALLPLFSLLKVS-GKLVALGLPEKPLDLPIFPL-VLGRKMVGGSQIGGMKETQEML 308

Query: 327 SVVDMY-MNKQLELEKFITHRIPFSEINKAFEYMVKGE 363
                + +   +EL       I  S+IN A + + K +
Sbjct: 309 EFCAKHKIVSDIEL-------IKMSDINSAMDRLAKSD 339

Length = 375

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 61.1 bits (149), Expect = 2e-10
 Identities = 75/371 (20%), Positives = 138/371 (37%), Gaps = 82/371 (22%)

Query: 6   AAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 63
           A V  + G P  L ++++ +  P+   V I++K   L R++++  +    +  FPR+ G 
Sbjct: 3   AIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGI 62

Query: 64  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 123
           EA G VE    G      G  V                  + M  + R            
Sbjct: 63  EAVGEVEEAPGG--TFTPGQRV-----------------ATAMGGMGR------------ 91

Query: 124 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA---T 180
               + +G          +++EYT+V +  V  I+      ++  L     T  G+   +
Sbjct: 92  ----TFDG----------SYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRS 137

Query: 181 LNVAKPE----RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 236
           L +   +    RG + +V GL A+ LA A GA +   +      RS +R    K+ G  +
Sbjct: 138 LGLQPGDTLLIRGGTSSV-GLAALKLAKALGATVTATT------RSPERAALLKELGADE 190

Query: 237 -FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN--IDNMISAFECVHDGWGVAVLVGVPS 293
             ++       ++        GG D+ +E  G   + +   +   +  G G+  + G+  
Sbjct: 191 VVIDDGAIAEQLRAA-----PGGFDKVLELVGTATLKD---SLRHLRPG-GIVCMTGLLG 241

Query: 294 KDAVFMT-KPINVL---NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI-P 348
                    P++ +      TL G       P+T L  + D      L++      ++  
Sbjct: 242 GQWTLEDFNPMDDIPSGVNLTLTG-SSSGDVPQTPLQELFDFVAAGHLDI---PPSKVFT 297

Query: 349 FSEINKAFEYM 359
           F EI +A  YM
Sbjct: 298 FDEIVEAHAYM 308

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 54/233 (23%), Positives = 82/233 (35%), Gaps = 55/233 (23%)

Query: 30  EVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVF 89
           EV +++K   L   D+    + G  P      G E +G+V  VG GV+ L+VGD V+   
Sbjct: 2   EVEVEVKAAGLNFRDVLV--ALGLLPGDETPLGLECSGIVTRVGSGVTGLKVGDRVM--- 56

Query: 90  TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVV 149
                                                           L    F+ +  V
Sbjct: 57  -----------------------------------------------GLAPGAFATHVRV 69

Query: 150 HSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF-GLGAVGLAAAEGA 208
            +  V KI      ++   L     T   A +++A+ ++G SV +    G VG AA + A
Sbjct: 70  DARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLA 129

Query: 209 RIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD 260
           +  GA     V    KR    +  G  D + +S  D    + I   T G GVD
Sbjct: 130 QHLGAEVFATVGSEEKREFLRELGGPVDHIFSS-RDLSFADGILRATGGRGVD 181

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 57.0 bits (138), Expect = 4e-09
 Identities = 53/259 (20%), Positives = 85/259 (32%), Gaps = 62/259 (23%)

Query: 16  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-----SKGQTPLFPRIFGHEAAGVVE 70
           L I +     P+  +V IK+    + R D    +       G +     I G E AG VE
Sbjct: 16  LKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSE----ILGLEVAGYVE 71

Query: 71  SVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSIN 130
            VG  V   + GD V+ +  G                                       
Sbjct: 72  DVGSDVKRFKEGDRVMALLPG--------------------------------------- 92

Query: 131 GEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 190
                       ++EY V H G V  I      ++   +     T           ++G 
Sbjct: 93  ----------GGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQ 142

Query: 191 SVAVF-GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQE 249
           SV +  G   VG AAA+ A   GA+ II    S ++ +  KK      +   + +     
Sbjct: 143 SVLIHAGASGVGTAAAQLAEKYGAATIITTS-SEEKVDFCKKLAAIILIRYPD-EEGFAP 200

Query: 250 VIAEMTNG-GVDRSVECTG 267
            + ++T   GV+  ++C G
Sbjct: 201 KVKKLTGEKGVNLVLDCVG 219

Length = 334

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 56.2 bits (136), Expect = 8e-09
 Identities = 72/294 (24%), Positives = 122/294 (41%), Gaps = 42/294 (14%)

Query: 31  VRIKIKYTSLCRTDLYFWESKGQTPLF----PRIFGHEAAGVVESVGEGVSDLEVGDHVL 86
             ++I    +C +DL++++ +G+   F    P + GHE  G +       S L+ G  V 
Sbjct: 30  TLVQITRGGICGSDLHYYQ-EGKVGNFVIKAPMVLGHEVIGKIVHSDS--SGLKEGQTVA 86

Query: 87  PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFS--INGEPVNHFLGTSTFS 144
              +  CG C++C S   N C  +R           G + +   ++G           F+
Sbjct: 87  INPSKPCGHCKYCLSHNENQCTTMRFF---------GSAMYFPHVDG----------GFT 127

Query: 145 EYTVVHSG-CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLA 203
            Y VV +  C+    P    +KV   +  ++  + A  + A   +G  V V G+G +G  
Sbjct: 128 RYKVVDTAQCIPY--PEKADEKVMAFAEPLAVAIHA-AHQAGDLQGKRVFVSGVGPIGCL 184

Query: 204 AAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV 263
                +  GA+ I+  D S +    A++ G    VN    +  +    AE   G  D S 
Sbjct: 185 IVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQ--NDDLDHYKAE--KGYFDVSF 240

Query: 264 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL--NERTLKGTF 315
           E +G+  ++ +  E V    GV V VG+      F   P+  L   E +LKG+F
Sbjct: 241 EVSGHPSSINTCLE-VTRAKGVMVQVGMGGAPPEF---PMMTLIVKEISLKGSF 290

Length = 343

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 56.0 bits (136), Expect = 1e-08
 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 7/85 (8%)

Query: 6  AAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPRI 60
          A V    G P    +++V    P   +V +++  + +   D      +G        P I
Sbjct: 3  ALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKI--RRGGAAARPPLPAI 60

Query: 61 FGHEAAGVVESVGEGVSDLEVGDHV 85
           G + AGVVE+VGEGV+   VGD V
Sbjct: 61 LGCDVAGVVEAVGEGVTRFRVGDEV 85

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score = 54.9 bits (132), Expect = 2e-08
 Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 12/109 (11%)

Query: 9   AWEAGKPLIIQD-------VEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF-PRI 60
           AWE  +P  I+D         V  P   E+ ++++   +CRTDL+   S+G  P+  PR+
Sbjct: 1   AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHV--SEGDLPVHRPRV 58

Query: 61  F-GHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMC 107
             GHE  G V   G       VGD V +      CG CR+CR    N+C
Sbjct: 59  TPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLC 107

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 54.2 bits (131), Expect = 4e-08
 Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 9/84 (10%)

Query: 14 KPLIIQDVEVA--PPQAMEVRIKIKYTSLCRTDLYFWESKGQ----TPLFPRIFGHEAAG 67
           PL+++ V +   PP   EV +++    +  +DL      G      PL P + G+E  G
Sbjct: 10 LPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLI--TISGAYGSRPPL-PAVPGNEGVG 66

Query: 68 VVESVGEGVSDLEVGDHVLPVFTG 91
          VV  VG GVS L VG  VLP+   
Sbjct: 67 VVVEVGSGVSGLLVGQRVLPLGGE 90

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 52.3 bits (126), Expect = 1e-07
 Identities = 34/86 (39%), Positives = 44/86 (51%), Gaps = 8/86 (9%)

Query: 6  AAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFW---ESKGQTPLFPR 59
          AAV  + G P   L I +V    P A EV ++   + +   DL  W    + G  P  P 
Sbjct: 3  AAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDL--WTIRGTYGYKPELPA 60

Query: 60 IFGHEAAGVVESVGEGVSDLEVGDHV 85
          I G EA GVV++VGEGV  L+VG  V
Sbjct: 61 IGGSEAVGVVDAVGEGVKGLQVGQRV 86

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 52.0 bits (125), Expect = 1e-07
 Identities = 33/72 (45%), Positives = 41/72 (56%), Gaps = 2/72 (2%)

Query: 22 EVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE 80
          EVAPP   EVRI+++  SL   DL        T P +P   G EA+GVV +VG  V+ L 
Sbjct: 1  EVAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLA 60

Query: 81 VGDHVLPVFTGE 92
          VGD V+   TGE
Sbjct: 61 VGDEVI-AGTGE 71

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 51.8 bits (125), Expect = 2e-07
 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 11/75 (14%)

Query: 18 IQDVEVAPPQAMEVRIKIKYTSL------CRTDLYFWESKGQTPLFPRIFGHEAAGVVES 71
          ++   +  P + EVR++++   L       R  LY        P  P + G E AG VE+
Sbjct: 16 VEKEALPEPSSGEVRVRVEACGLNFADLMARQGLY-----DSAPKPPFVPGFECAGTVEA 70

Query: 72 VGEGVSDLEVGDHVL 86
          VGEGV D +VGD V+
Sbjct: 71 VGEGVKDFKVGDRVM 85

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score = 51.1 bits (123), Expect = 3e-07
 Identities = 58/260 (22%), Positives = 93/260 (35%), Gaps = 71/260 (27%)

Query: 30  EVRIKIKYTSLCRTDL-----YFWESKGQTPLFPRIFGHEAAGVVESVGEGV-SDLEVGD 83
           E+ +K+   +L   DL     Y +  K +     +  G + +GV+  VG  V S+ +VGD
Sbjct: 30  EIVVKVHAAALNPVDLKLYNSYTFHFKVK----EKGLGRDYSGVIVKVGSNVASEWKVGD 85

Query: 84  HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNH------- 136
            V       CG   H       +   L ++P         + + SI  +P N        
Sbjct: 86  EV-------CGIYPHPYGGQGTLSQYLLVDP--------KKDKKSITRKPENISLEEAAA 130

Query: 137 ---FLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVA 193
               LGT+    Y ++          L P  KV +L        G +         +SV 
Sbjct: 131 WPLVLGTA----YQILED----LGQKLGPDSKVLVL--------GGS---------TSV- 164

Query: 194 VFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR--PIQEVI 251
             G  A+ LA            ++G   SS+  E  KK G   F++   H     ++ V+
Sbjct: 165 --GRFAIQLAKNHYN----IGTVVGTC-SSRSAELNKKLGADHFIDYDAHSGVKLLKPVL 217

Query: 252 -AEMTNGGVDRSVECTGNID 270
                 G  D  ++C G  D
Sbjct: 218 ENVKGQGKFDLILDCVGGYD 237

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 50.3 bits (121), Expect = 6e-07
 Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 11/74 (14%)

Query: 18 IQDVEVAPPQAMEVRIKIKYTSLCRTDL------YFWESKGQTPLFPRIFGHEAAGVVES 71
          I DV V  P   EV +K ++  +  +D+      Y     G  P F    G E  G V +
Sbjct: 20 IVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYD---PGVKPPFD--CGFEGVGEVVA 74

Query: 72 VGEGVSDLEVGDHV 85
          VGEGV+D +VGD V
Sbjct: 75 VGEGVTDFKVGDAV 88

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 13 GKPLIIQDVEVAP--PQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVE 70
          G P ++Q VE  P  P   EV+++ K   +   D Y        P  P   G EAAGVV 
Sbjct: 11 GGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVS 70

Query: 71 SVGEGVSDLEVGDHV 85
           VG GV  ++VGD V
Sbjct: 71 KVGSGVKHIKVGDRV 85

Length = 327

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 48.6 bits (117), Expect = 2e-06
 Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 7/80 (8%)

Query: 11 EAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFP---RIFGHEA 65
          E G P  L + +V    P   EV I++    + R DL   + +G  P  P    I G E 
Sbjct: 8  EPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLL--QRQGLYPPPPGASDILGLEV 65

Query: 66 AGVVESVGEGVSDLEVGDHV 85
          AGVV +VG GV+  +VGD V
Sbjct: 66 AGVVVAVGPGVTGWKVGDRV 85

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 54 TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLP 87
          TP  P + G+E  G V  VG GV  L+ GD V+P
Sbjct: 60 TPEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIP 93

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 48.3 bits (116), Expect = 3e-06
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%)

Query: 15 PLIIQDVEVAPPQA--MEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESV 72
          P  + D+E+  P     ++ ++++  S+   D          P  P+I G +A+GVVE+V
Sbjct: 15 PDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAV 74

Query: 73 GEGVSDLEVGDHV 85
          G  V+  +VGD V
Sbjct: 75 GSEVTLFKVGDEV 87

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 46.5 bits (111), Expect = 1e-05
 Identities = 78/374 (20%), Positives = 131/374 (35%), Gaps = 89/374 (23%)

Query: 16  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-QTPLFPRIFGHEAAGVVESVGE 74
           L + + ++  P A EV +K++ + +   D+          P  P   G++  G V+++G 
Sbjct: 15  LKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGS 74

Query: 75  GVSDLEVGDHV--LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGE 132
           GV+  EVGD V  L    G  G+  +   D      L+ + P  GV  A+      +N  
Sbjct: 75  GVTGFEVGDRVAALTR-VG--GNAEYINLDA---KYLVPV-P-EGVDAAEAVC-LVLNY- 124

Query: 133 PVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 192
                      + Y ++H    AK+       +V I   G S G+G  L           
Sbjct: 125 ----------VTAYQMLH--RAAKV---LTGQRVLIH--GASGGVGQAL----------- 156

Query: 193 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA 252
                  + LA   GA + G +       S +     ++ G T     ++   P     A
Sbjct: 157 -------LELALLAGAEVYGTA-------SERNHAALRELGATPIDYRTKDWLP-----A 197

Query: 253 EMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNER--- 309
            +T GGVD   +  G  ++   ++  +  G G  V  G  S           + +     
Sbjct: 198 MLTPGGVDVVFDGVG-GESYEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARL 255

Query: 310 -TLKGTFFGN---------------YKPRTDLPSVVDMYMNKQLELEKF---ITHRIPFS 350
             LK    G                   R DL  ++D+     L   K    I  R+P S
Sbjct: 256 AKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDL-----LAKGKIRPKIAKRLPLS 310

Query: 351 EINKAFEYMVKGEG 364
           E+ +A   +  G+ 
Sbjct: 311 EVAEAHRLLESGKV 324

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 46.5 bits (111), Expect = 1e-05
 Identities = 65/270 (24%), Positives = 91/270 (33%), Gaps = 57/270 (21%)

Query: 19  QDVEVAPPQAMEVRIKIKYTSLCRTDLYF---WESK----------------GQTPL-FP 58
            DV V  P   EV I++    +  TD+     W S                     L FP
Sbjct: 19  DDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFP 78

Query: 59  RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGV 118
           RI G +  G V +VGEGV    +G+ VL V        R    D     D +        
Sbjct: 79  RIQGADIVGRVVAVGEGVDTARIGERVL-VDPSI----RDPPEDDPADIDYI-------- 125

Query: 119 MLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 178
               G  R   +G           F+EYTVV +     +N      ++    C  ST   
Sbjct: 126 ----GSER---DG----------GFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAEN 168

Query: 179 ATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 237
             L  A    G +V V G  G VG A  + A+  GA  +I V  ++K  E  +  G    
Sbjct: 169 -MLERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAVAGAAKE-EAVRALGADTV 225

Query: 238 VNTSEHDRPIQEVIAEMTNGGVDRSVECTG 267
           +          + +       VD   +  G
Sbjct: 226 ILRDAPLLADAKALGG---EPVDVVADVVG 252

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 45.8 bits (110), Expect = 1e-05
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 33 IKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG 91
          I+++   L   D+    + G  P    + G E AGVV  VG GV+ L VGD V+ +  G
Sbjct: 1  IEVRAAGLNFRDVLI--ALGLYP-GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAPG 56

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 43.8 bits (104), Expect = 7e-05
 Identities = 33/80 (41%), Positives = 42/80 (52%), Gaps = 7/80 (8%)

Query: 11 EAGKPLIIQDVEVAPPQ--AMEVRIKIKYTSLCRTDLYFWESKGQTPLFP---RIFGHEA 65
          E G P ++  VEV  P   A EV I++    + R DL   +  G+ P  P    I G E 
Sbjct: 8  EPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLL--QRAGKYPPPPGASDILGLEV 65

Query: 66 AGVVESVGEGVSDLEVGDHV 85
          AG V +VGEGVS  +VGD V
Sbjct: 66 AGEVVAVGEGVSRWKVGDRV 85

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 41.8 bits (99), Expect = 3e-04
 Identities = 20/82 (24%), Positives = 27/82 (32%), Gaps = 18/82 (21%)

Query: 22  EVAPPQAM---EVRIKIKYTSLCRTD---------------LYFWESKGQTPLFPRIFGH 63
               P      +V IK+   S+   D                     K     FP   G 
Sbjct: 20  NARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGR 79

Query: 64  EAAGVVESVGEGVSDLEVGDHV 85
           + +GVV  +G GV   E+GD V
Sbjct: 80  DCSGVVVDIGSGVKSFEIGDEV 101

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 42.0 bits (99), Expect = 4e-04
 Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 41/196 (20%)

Query: 60  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 119
           I G +A+G+V +VGEGV + +VGD V+           HC     N  +    +P    M
Sbjct: 84  IGGSDASGIVWAVGEGVKNWKVGDEVVV----------HCSVWDGNDPERAGGDP----M 129

Query: 120 LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVSTGLG 178
               Q    I G   N+     +F+++ +V +   + K   L+  +            +G
Sbjct: 130 FDPSQ---RIWGYETNY----GSFAQFALVQATQLMPKPKHLSWEEAAAY------MLVG 176

Query: 179 ATL---------NVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEE 228
           AT          N  KP  G +V ++G  G +G  A + AR AGA   + V  S ++ E 
Sbjct: 177 ATAYRMLFGWNPNTVKP--GDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSEEKAEY 233

Query: 229 AKKFGVTDFVNTSEHD 244
            +  G    +N  + D
Sbjct: 234 CRALGAEGVINRRDFD 249

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 40.3 bits (95), Expect = 0.001
 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 6/76 (7%)

Query: 14 KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPRIFGHEAAGVVE 70
          K L + + EV  P   EV IK++   +  +DL F   KGQ       P   G E +G V 
Sbjct: 16 KELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGF--LKGQYGSTKALPVPPGFEGSGTVV 73

Query: 71 SVGEG-VSDLEVGDHV 85
          + G G ++   +G  V
Sbjct: 74 AAGGGPLAQSLIGKRV 89

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	373
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	100.0
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	100.0
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	100.0
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	100.0
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.98
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.97
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.97
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.96
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.96
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.95
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.89
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.72
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.47
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.34
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.15
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.64
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.53
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.35
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.33
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.3
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.19
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	98.07
PLN02494	477	adenosylhomocysteinase	98.05
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	98.01
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.0
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.86
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.86
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.84
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.83
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.79
PRK08324	681	short chain dehydrogenase; Validated	97.72
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.58
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.54
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.51
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.41
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.35
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.33
PRK05693	274	short chain dehydrogenase; Provisional	97.32
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.31
PRK06182	273	short chain dehydrogenase; Validated	97.27
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.24
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.24
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.21
PRK05993	277	short chain dehydrogenase; Provisional	97.11
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.08
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	97.05
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.03
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	97.01
PRK12742	237	oxidoreductase; Provisional	97.0
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.99
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.99
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.98
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.93
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	96.93
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.92
PLN03209	576	translocon at the inner envelope of chloroplast su	96.89
TIGR00438	188	rrmJ cell division protein FtsJ.	96.89
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.88
PRK07326	237	short chain dehydrogenase; Provisional	96.88
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.88
PRK14967	223	putative methyltransferase; Provisional	96.85
COG0300	265	DltE Short-chain dehydrogenases of various substra	96.81
PRK08017	256	oxidoreductase; Provisional	96.81
PRK12828	239	short chain dehydrogenase; Provisional	96.79
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	96.77
PRK07060	245	short chain dehydrogenase; Provisional	96.76
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.75
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.73
PRK06139	330	short chain dehydrogenase; Provisional	96.72
PRK08177	225	short chain dehydrogenase; Provisional	96.72
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.69
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.68
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.67
PRK00536	262	speE spermidine synthase; Provisional	96.66
PRK08628	258	short chain dehydrogenase; Provisional	96.66
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.66
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.65
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	96.61
PRK08265	261	short chain dehydrogenase; Provisional	96.58
PRK06953	222	short chain dehydrogenase; Provisional	96.56
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.55
PRK06057	255	short chain dehydrogenase; Provisional	96.54
PRK07806	248	short chain dehydrogenase; Provisional	96.51
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.51
PRK12939	250	short chain dehydrogenase; Provisional	96.49
PRK07109	334	short chain dehydrogenase; Provisional	96.47
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.47
PRK06949	258	short chain dehydrogenase; Provisional	96.46
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.46
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.45
PRK08267	260	short chain dehydrogenase; Provisional	96.44
PRK04148	134	hypothetical protein; Provisional	96.4
COG4122	219	Predicted O-methyltransferase [General function pr	96.4
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.4
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.4
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.37
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.35
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.34
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.34
PLN02366	308	spermidine synthase	96.33
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.32
PRK07814	263	short chain dehydrogenase; Provisional	96.32
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.31
PRK05872	296	short chain dehydrogenase; Provisional	96.3
PLN02780	320	ketoreductase/ oxidoreductase	96.3
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.29
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	96.26
PRK12829	264	short chain dehydrogenase; Provisional	96.23
PRK00811	283	spermidine synthase; Provisional	96.23
PRK06180	277	short chain dehydrogenase; Provisional	96.22
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.2
PRK07825	273	short chain dehydrogenase; Provisional	96.15
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.15
PRK05867	253	short chain dehydrogenase; Provisional	96.14
PRK09291	257	short chain dehydrogenase; Provisional	96.14
PRK06841	255	short chain dehydrogenase; Provisional	96.13
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	96.13
PRK07774	250	short chain dehydrogenase; Provisional	96.11
PRK07831	262	short chain dehydrogenase; Provisional	96.11
PRK07402	196	precorrin-6B methylase; Provisional	96.09
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	96.09
PRK08339	263	short chain dehydrogenase; Provisional	96.06
PRK07024	257	short chain dehydrogenase; Provisional	96.03
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.02
PRK07832	272	short chain dehydrogenase; Provisional	96.01
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.01
PRK11207	197	tellurite resistance protein TehB; Provisional	96.01
PRK05866	293	short chain dehydrogenase; Provisional	95.99
PRK01581	374	speE spermidine synthase; Validated	95.99
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	95.98
PRK08263	275	short chain dehydrogenase; Provisional	95.97
PRK05562	223	precorrin-2 dehydrogenase; Provisional	95.96
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	95.96
PRK06128	300	oxidoreductase; Provisional	95.96
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	95.95
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	95.95
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	95.95
PRK09072	263	short chain dehydrogenase; Provisional	95.95
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.95
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.93
PRK08703	239	short chain dehydrogenase; Provisional	95.92
PLN03075	296	nicotianamine synthase; Provisional	95.92
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.91
PRK06483	236	dihydromonapterin reductase; Provisional	95.9
PRK06500	249	short chain dehydrogenase; Provisional	95.89
PRK06196	315	oxidoreductase; Provisional	95.87
PRK08618	325	ornithine cyclodeaminase; Validated	95.86
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	95.86
PRK07062	265	short chain dehydrogenase; Provisional	95.86
PRK07890	258	short chain dehydrogenase; Provisional	95.86
PRK07478	254	short chain dehydrogenase; Provisional	95.85
PRK07454	241	short chain dehydrogenase; Provisional	95.85
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	95.85
PRK07677	252	short chain dehydrogenase; Provisional	95.85
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.85
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	95.84
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	95.84
PRK06482	276	short chain dehydrogenase; Provisional	95.83
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	95.83
PRK07574	385	formate dehydrogenase; Provisional	95.81
PRK06172	253	short chain dehydrogenase; Provisional	95.8
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	95.8
PRK08589	272	short chain dehydrogenase; Validated	95.79
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.79
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.78
PRK04457	262	spermidine synthase; Provisional	95.77
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	95.76
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	95.75
PRK08264	238	short chain dehydrogenase; Validated	95.75
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	95.75
PRK05854	313	short chain dehydrogenase; Provisional	95.74
PRK07523	255	gluconate 5-dehydrogenase; Provisional	95.73
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.73
PRK08862	227	short chain dehydrogenase; Provisional	95.72
COG0421	282	SpeE Spermidine synthase [Amino acid transport and	95.71
PRK08643	256	acetoin reductase; Validated	95.7
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.7
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.7
CHL00194	317	ycf39 Ycf39; Provisional	95.69
KOG0725	270	consensus Reductases with broad range of substrate	95.69
PRK06484	520	short chain dehydrogenase; Validated	95.68
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	95.66
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.66
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.66
PRK06138	252	short chain dehydrogenase; Provisional	95.65
PRK05884	223	short chain dehydrogenase; Provisional	95.64
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.64
PRK06194	287	hypothetical protein; Provisional	95.63
PRK12937	245	short chain dehydrogenase; Provisional	95.62
PRK08213	259	gluconate 5-dehydrogenase; Provisional	95.61
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	95.6
COG2910	211	Putative NADH-flavin reductase [General function p	95.59
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.59
PLN02253	280	xanthoxin dehydrogenase	95.58
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	95.58
PRK07453	322	protochlorophyllide oxidoreductase; Validated	95.58
PRK12548	289	shikimate 5-dehydrogenase; Provisional	95.58
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	95.58
PRK06914	280	short chain dehydrogenase; Provisional	95.57
PRK06198	260	short chain dehydrogenase; Provisional	95.57
PRK06179	270	short chain dehydrogenase; Provisional	95.57
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.57
PRK05717	255	oxidoreductase; Validated	95.57
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.56
PRK07063	260	short chain dehydrogenase; Provisional	95.56
PRK07035	252	short chain dehydrogenase; Provisional	95.56
PRK08226	263	short chain dehydrogenase; Provisional	95.55
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.55
PRK07074	257	short chain dehydrogenase; Provisional	95.54
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.54
PRK06181	263	short chain dehydrogenase; Provisional	95.54
PRK08219	227	short chain dehydrogenase; Provisional	95.52
PRK07856	252	short chain dehydrogenase; Provisional	95.51
PLN03139	386	formate dehydrogenase; Provisional	95.51
PRK06125	259	short chain dehydrogenase; Provisional	95.51
PRK07576	264	short chain dehydrogenase; Provisional	95.5
PRK07067	257	sorbitol dehydrogenase; Provisional	95.49
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	95.48
PRK12367	245	short chain dehydrogenase; Provisional	95.48
PLN02476	278	O-methyltransferase	95.48
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	95.47
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	95.45
PRK06114	254	short chain dehydrogenase; Provisional	95.45
PRK05875	276	short chain dehydrogenase; Provisional	95.44
PRK08317	241	hypothetical protein; Provisional	95.43
PRK05876	275	short chain dehydrogenase; Provisional	95.43
PRK09242	257	tropinone reductase; Provisional	95.41
PRK07985	294	oxidoreductase; Provisional	95.39
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	95.37
PRK06197	306	short chain dehydrogenase; Provisional	95.37
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.35
PRK06124	256	gluconate 5-dehydrogenase; Provisional	95.34
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	95.33
PRK06398	258	aldose dehydrogenase; Validated	95.33
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.32
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.31
PRK07904	253	short chain dehydrogenase; Provisional	95.31
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	95.31
PRK08251	248	short chain dehydrogenase; Provisional	95.31
PRK08277	278	D-mannonate oxidoreductase; Provisional	95.29
PRK08085	254	gluconate 5-dehydrogenase; Provisional	95.28
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	95.28
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	95.27
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.26
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.25
PRK09186	256	flagellin modification protein A; Provisional	95.25
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	95.25
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.24
PRK10538	248	malonic semialdehyde reductase; Provisional	95.24
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	95.23
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	95.22
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.21
PRK06101	240	short chain dehydrogenase; Provisional	95.2
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	95.19
PRK08340	259	glucose-1-dehydrogenase; Provisional	95.19
TIGR03215	285	ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati	95.17
COG0569	225	TrkA K+ transport systems, NAD-binding component [	95.17
PRK07577	234	short chain dehydrogenase; Provisional	95.17
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	95.17
PRK08328	231	hypothetical protein; Provisional	95.16
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.14
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.12
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.12
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	95.11
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	95.11
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.1
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.08
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.08
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	95.08
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	95.07
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	95.02
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	95.0
PRK07102	243	short chain dehydrogenase; Provisional	94.97
PLN00203	519	glutamyl-tRNA reductase	94.96
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	94.95
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.95
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	94.94
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	94.94
PRK10669	558	putative cation:proton antiport protein; Provision	94.92
PRK07097	265	gluconate 5-dehydrogenase; Provisional	94.92
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	94.9
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	94.9
PRK07340	304	ornithine cyclodeaminase; Validated	94.89
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	94.89
PRK08303	305	short chain dehydrogenase; Provisional	94.88
PF01564	246	Spermine_synth: Spermine/spermidine synthase; Inte	94.88
PRK06720	169	hypothetical protein; Provisional	94.87
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	94.85
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	94.83
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	94.81
PRK08300	302	acetaldehyde dehydrogenase; Validated	94.81
PRK03562	621	glutathione-regulated potassium-efflux system prot	94.81
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	94.8
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	94.8
PLN02823	336	spermine synthase	94.79
PRK13243	333	glyoxylate reductase; Reviewed	94.78
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	94.78
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	94.78
PLN02244	340	tocopherol O-methyltransferase	94.77
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	94.75
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	94.74
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	94.73
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.72
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	94.72
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	94.69
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	94.68
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	94.68
PRK07417	279	arogenate dehydrogenase; Reviewed	94.68
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	94.67
PRK08278	273	short chain dehydrogenase; Provisional	94.65
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	94.64
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	94.64
PRK05650	270	short chain dehydrogenase; Provisional	94.63
PRK10258	251	biotin biosynthesis protein BioC; Provisional	94.63
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	94.62
PLN02256	304	arogenate dehydrogenase	94.6
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.59
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.59
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.57
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.57
COG0673	342	MviM Predicted dehydrogenases and related proteins	94.56
PLN02589	247	caffeoyl-CoA O-methyltransferase	94.55
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	94.54
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	94.54
PLN02233	261	ubiquinone biosynthesis methyltransferase	94.51
PRK06523	260	short chain dehydrogenase; Provisional	94.5
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	94.5
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	94.46
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	94.45
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	94.44
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	94.42
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	94.41
PRK06484	520	short chain dehydrogenase; Validated	94.39
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	94.38
TIGR02415	254	23BDH acetoin reductases. One member of this famil	94.37
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	94.35
PRK12743	256	oxidoreductase; Provisional	94.34
PRK07791	286	short chain dehydrogenase; Provisional	94.33
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	94.33
PRK03659	601	glutathione-regulated potassium-efflux system prot	94.3
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.29
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.28
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	94.28
PRK12938	246	acetyacetyl-CoA reductase; Provisional	94.27
PRK08223	287	hypothetical protein; Validated	94.26
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	94.26
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.23
PRK03612	521	spermidine synthase; Provisional	94.22
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.21
PLN02928	347	oxidoreductase family protein	94.17
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	94.16
PRK13255	218	thiopurine S-methyltransferase; Reviewed	94.16
PRK06940	275	short chain dehydrogenase; Provisional	94.15
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	94.13
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	94.13
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	94.12
PRK12747	252	short chain dehydrogenase; Provisional	94.1
PRK09135	249	pteridine reductase; Provisional	94.1
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	94.09
PRK13303	265	L-aspartate dehydrogenase; Provisional	94.06
PRK07775	274	short chain dehydrogenase; Provisional	94.06
PRK04266	226	fibrillarin; Provisional	94.06
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	94.05
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	94.04
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	94.0
PRK10637	457	cysG siroheme synthase; Provisional	93.97
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	93.95
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	93.93
PRK12480	330	D-lactate dehydrogenase; Provisional	93.92
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.92
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	93.91
COG1893	307	ApbA Ketopantoate reductase [Coenzyme metabolism]	93.89
PRK12779	944	putative bifunctional glutamate synthase subunit b	93.89
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.88
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	93.85
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	93.85
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	93.83
PRK06701	290	short chain dehydrogenase; Provisional	93.81
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	93.76
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	93.75
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	93.75
PRK06849	389	hypothetical protein; Provisional	93.74
PRK13984	604	putative oxidoreductase; Provisional	93.74
PRK07411	390	hypothetical protein; Validated	93.72

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=1.3e-66  Score=457.14  Aligned_cols=366  Identities=48%  Similarity=0.862  Sum_probs=350.3

Q ss_pred             cccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 017336            2 SSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   81 (373)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   81 (373)
                      +++||.+.+++++||+++++++++|++|||+||+.++|+|++|.+.++|..|.. +|.++|||++|+|++||++|+++++
T Consensus         1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp   79 (366)
T COG1062           1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP   79 (366)
T ss_pred             CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence            378999999999999999999999999999999999999999999999988877 9999999999999999999999999


Q ss_pred             CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336           82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  161 (373)
Q Consensus        82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~  161 (373)
                      ||+|+..+...|++|.+|.+|..|+|...+-.+..|.+ +||.++++.+|...+++.|+++|+||..+++.++++++++.
T Consensus        80 GDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m-~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~  158 (366)
T COG1062          80 GDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTM-PDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA  158 (366)
T ss_pred             CCEEEEcccCCCCCCchhhCCCcccccchhhhcccccc-cCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence            99999999999999999999999999999999888965 89999999999999999999999999999999999999999


Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  241 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~  241 (373)
                      +++.++.+.|...|.+.+..+.+++++|++|.|+|.|++|++++|-|+..|++++++++.+++|++++++||+++++|..
T Consensus       159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~  238 (366)
T COG1062         159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK  238 (366)
T ss_pred             CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCC
Q 017336          242 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP  321 (373)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  321 (373)
                      +.. +..+.+.+++++++|++|||+|+.+.+.+++++..+ ||+.+++|.......++++++.+....+|+|+.++....
T Consensus       239 ~~~-~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~-~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p  316 (366)
T COG1062         239 EVD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARP  316 (366)
T ss_pred             hhh-hHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhc-CCeEEEEecCCCCceeecChHHeeccceEEEEeecCCcc
Confidence            663 489999999999999999999999999999999999 699999999987888888888888779999999999998


Q ss_pred             CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336          322 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  371 (373)
Q Consensus       322 ~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~  371 (373)
                      +.++..++++..+|++++.++++++++|+|+|+||+.|.+++..|-|+.+
T Consensus       317 ~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~  366 (366)
T COG1062         317 RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF  366 (366)
T ss_pred             ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence            99999999999999999999999999999999999999999999988864

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=2.1e-65  Score=459.90  Aligned_cols=335  Identities=35%  Similarity=0.541  Sum_probs=301.0

Q ss_pred             CcccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 017336            1 MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         1 m~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |++|||+++.++++|+++.+++.|+|+++||+|+|+|||+|++|++.++|.++...+|+|+|||++|+|+++|++|++|+
T Consensus         1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k   80 (339)
T COG1064           1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK   80 (339)
T ss_pred             CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence            67999999999999999999999999999999999999999999999999999988999999999999999999999999


Q ss_pred             CCCEEee-cCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC
Q 017336           81 VGDHVLP-VFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP  159 (373)
Q Consensus        81 ~Gd~V~~-~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~  159 (373)
                      +||||.+ ....+|+.|.+|++|++++|++....   |++                   .+|+|+||+++|+++++++|+
T Consensus        81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~---gy~-------------------~~GGyaeyv~v~~~~~~~iP~  138 (339)
T COG1064          81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT---GYT-------------------TDGGYAEYVVVPARYVVKIPE  138 (339)
T ss_pred             CCCEEEecCccCCCCCCccccCcccccCCCcccc---cee-------------------ecCcceeEEEEchHHeEECCC
Confidence            9999998 88999999999999999999997766   443                   235999999999999999999


Q ss_pred             CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      +++++.||.+.|+..|+|++| +..+++||++|+|+|.|++|++++|+|+++|+ +|++++++++|++.+++||++++++
T Consensus       139 ~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~  216 (339)
T COG1064         139 GLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVIN  216 (339)
T ss_pred             CCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEE
Confidence            999999999999999999996 45999999999999999999999999999998 9999999999999999999999998


Q ss_pred             CCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEeccC
Q 017336          240 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGN  318 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~  318 (373)
                      ..+.+  +.+.+++.    +|++||+++ +..++.+++.|+++ |+++++|..........+.+.+ .++++|.|+..++
T Consensus       217 ~~~~~--~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~  288 (339)
T COG1064         217 SSDSD--ALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT  288 (339)
T ss_pred             cCCch--hhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC
Confidence            76333  65666553    999999999 79999999999997 9999999985222233444434 4999999999776


Q ss_pred             CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336          319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                         +.++++++++..++++.+.  +.+.++++++++|++.|++++. +|.||++.
T Consensus       289 ---~~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~  338 (339)
T COG1064         289 ---RADLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGRAVIDMS  338 (339)
T ss_pred             ---HHHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence               4579999999999988654  4479999999999999999995 59998764

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2e-64  Score=436.02  Aligned_cols=369  Identities=56%  Similarity=1.005  Sum_probs=356.0

Q ss_pred             ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      ++||.+.|++++||.++++..++|+.+||+||+.++++|++|.+.+.|..+...||.|+|||.+|+|+.+|.+|+.+++|
T Consensus         7 ~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~vk~G   86 (375)
T KOG0022|consen    7 TCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTTVKPG   86 (375)
T ss_pred             EEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccccCCC
Confidence            58999999999999999999999999999999999999999999999988888899999999999999999999999999


Q ss_pred             CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336           83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  162 (373)
Q Consensus        83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~  162 (373)
                      |+|+..+...|++|.+|+++..|+|.........+.++.||.++++-+|..++++.++.+|+||.++++..+++++++.+
T Consensus        87 D~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aP  166 (375)
T KOG0022|consen   87 DHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAP  166 (375)
T ss_pred             CEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCCCC
Confidence            99999999999999999999999999999999889998999999999999999999999999999999999999999999


Q ss_pred             chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336          163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  242 (373)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~  242 (373)
                      ++.++.+.|.+.|+|.|.++.+++++|+++.|+|-|++|++++|-||..|+.++++++.+++|.+.+++||++..+|+.+
T Consensus       167 l~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d  246 (375)
T KOG0022|consen  167 LEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKD  246 (375)
T ss_pred             hhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999885


Q ss_pred             CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCCC
Q 017336          243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR  322 (373)
Q Consensus       243 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  322 (373)
                      ....+.+.+.+.|++|+|+-|||+|+.+.+.+++.+...+||.-+++|.......+.+.++.+.++.++.|+.++.+.++
T Consensus       247 ~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FGG~K~~  326 (375)
T KOG0022|consen  247 LKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFGGFKSK  326 (375)
T ss_pred             ccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEecccccch
Confidence            44458889999999999999999999999999999999999999999999888889999998889999999999999999


Q ss_pred             CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336          323 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  371 (373)
Q Consensus       323 ~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~  371 (373)
                      .++..+++...++++.+.+++++++||+++++||+.|.+++..|.|+.+
T Consensus       327 ~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~vl~~  375 (375)
T KOG0022|consen  327 SDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRCVLWM  375 (375)
T ss_pred             hhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEEEEeC
Confidence            9999999999999999999999999999999999999999999998864

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.4e-59  Score=409.13  Aligned_cols=342  Identities=27%  Similarity=0.460  Sum_probs=298.6

Q ss_pred             ccchhhhccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCcccccccccCCCC---CCCCccccccceEEEEEeCCCCCC
Q 017336            3 STAAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGEGVSD   78 (373)
Q Consensus         3 ~~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~   78 (373)
                      .|+|+++...+. +++++.|.|++ .|+||+|++.++|||.||++.++.....   .+.|+++|||.+|+|.++|+.|++
T Consensus         4 ~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~   82 (354)
T KOG0024|consen    4 DNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKH   82 (354)
T ss_pred             ccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccccc
Confidence            488999888887 99999999987 9999999999999999999999875433   347999999999999999999999


Q ss_pred             CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336           79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  158 (373)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p  158 (373)
                      +|+||||++.|..+|+.|++|++|+||+|++..+.   +..+.+                  |++++|++.++++++++|
T Consensus        83 LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~---atpp~~------------------G~la~y~~~~~dfc~KLP  141 (354)
T KOG0024|consen   83 LKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFC---ATPPVD------------------GTLAEYYVHPADFCYKLP  141 (354)
T ss_pred             cccCCeEEecCCCccccchhhhCcccccCCccccc---cCCCcC------------------CceEEEEEechHheeeCC
Confidence            99999999999999999999999999999998888   433333                  499999999999999999


Q ss_pred             CCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee
Q 017336          159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  238 (373)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi  238 (373)
                      +++|++++|.+. +++++|+| .+++++++|++|||+|+|++|++++.+||.+|+.+|++++..++|++.+++||++.+.
T Consensus       142 d~vs~eeGAl~e-PLsV~~HA-cr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~  219 (354)
T KOG0024|consen  142 DNVSFEEGALIE-PLSVGVHA-CRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTD  219 (354)
T ss_pred             CCCchhhccccc-chhhhhhh-hhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEe
Confidence            999999999887 79999998 5789999999999999999999999999999999999999999999999999999876


Q ss_pred             cCCCCC--ccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEe
Q 017336          239 NTSEHD--RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTF  315 (373)
Q Consensus       239 ~~~~~~--~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~  315 (373)
                      +....+  ..+.+.++...+. .+|+.|||+|....++.++.+++.+ |++++.|......+++.... ..+++.+.|++
T Consensus       220 ~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g~~~~~fpi~~v-~~kE~~~~g~f  297 (354)
T KOG0024|consen  220 PSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMGAEEIQFPIIDV-ALKEVDLRGSF  297 (354)
T ss_pred             eccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccCCCccccChhhh-hhheeeeeeee
Confidence            655433  2344555555554 6999999999988999999999997 99999998765544443333 34999999987


Q ss_pred             ccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC--ceeEEEecCC
Q 017336          316 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE--GLRCIISMED  373 (373)
Q Consensus       316 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~--~~k~v~~~~~  373 (373)
                      -+.   ..++...++++++|++.+++++++.|+++++.+||+.+.+++  ..|++++..+
T Consensus       298 ry~---~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~  354 (354)
T KOG0024|consen  298 RYC---NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE  354 (354)
T ss_pred             eec---cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence            433   237999999999999999999999999999999999999888  4599988654

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.7e-56  Score=386.65  Aligned_cols=339  Identities=28%  Similarity=0.469  Sum_probs=293.3

Q ss_pred             cchhhhccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 017336            4 TAAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   81 (373)
Q Consensus         4 ~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   81 (373)
                      ++++.+.++++  ++++.+++.|+|+++||+|+|+|||||++|++.+.|.++...+|+|+|||++|+|+++|++|+.|++
T Consensus        10 ~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~V~~~ki   89 (360)
T KOG0023|consen   10 QFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSNVTGFKI   89 (360)
T ss_pred             hEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCCcccccc
Confidence            67889999888  5778999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCEEee-cCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           82 GDHVLP-VFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        82 Gd~V~~-~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      ||||-+ ....+|+.|++|+.+++++|+.... ++.|+. .||..             ..|+|++|+++++.+++++|++
T Consensus        90 GD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~-t~~g~~-~DGt~-------------~~ggf~~~~~v~~~~a~kIP~~  154 (360)
T KOG0023|consen   90 GDRVGVGWLNGSCLSCEYCKSGNENYCPKMHF-TYNGVY-HDGTI-------------TQGGFQEYAVVDEVFAIKIPEN  154 (360)
T ss_pred             cCeeeeeEEeccccCccccccCCcccCCceeE-eccccc-cCCCC-------------ccCccceeEEEeeeeEEECCCC
Confidence            999965 5667899999999999999995222 222544 44422             2378999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh-hHHHHHHhcCCceeec
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVN  239 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~-~~~~~~~~lg~~~vi~  239 (373)
                      ++++.||.+.|+..|+|.+| +..++.||+++.|.|+|++|++++|+||++|. +|+++++++ +|.+.++.||++.+++
T Consensus       155 ~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv~  232 (360)
T KOG0023|consen  155 LPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGADVFVD  232 (360)
T ss_pred             CChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCcceeEE
Confidence            99999999999999999985 66888999999999997799999999999999 899999987 6667778899999887


Q ss_pred             CC-CCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc-ccceEEEEecc
Q 017336          240 TS-EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFG  317 (373)
Q Consensus       240 ~~-~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~  317 (373)
                      .. +.+  +.+.+...+++++|-|.+.  ....++.++.+|+.+ |++|++|.+..  .+.++.+++. +.+.|.||.++
T Consensus       233 ~~~d~d--~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~--~~~~~~~~lil~~~~I~GS~vG  305 (360)
T KOG0023|consen  233 STEDPD--IMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEK--PLKLDTFPLILGRKSIKGSIVG  305 (360)
T ss_pred             ecCCHH--HHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCC--cccccchhhhcccEEEEeeccc
Confidence            66 444  8888888888788888877  336788999999997 99999999874  5566666555 89999999987


Q ss_pred             CCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC-ceeEEEecC
Q 017336          318 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-GLRCIISME  372 (373)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~-~~k~v~~~~  372 (373)
                      +   +.+.++++++..++.+...   .+..+++++++||+.|++++ .+|.|+++.
T Consensus       306 ~---~ket~E~Ldf~a~~~ik~~---IE~v~~~~v~~a~erm~kgdV~yRfVvD~s  355 (360)
T KOG0023|consen  306 S---RKETQEALDFVARGLIKSP---IELVKLSEVNEAYERMEKGDVRYRFVVDVS  355 (360)
T ss_pred             c---HHHHHHHHHHHHcCCCcCc---eEEEehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence            7   4578999999999977543   58899999999999999999 469998864

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=2.8e-55  Score=414.60  Aligned_cols=367  Identities=49%  Similarity=0.921  Sum_probs=303.5

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   83 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   83 (373)
                      |||+++...+++++++++|.|+|+++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|++++.|++||
T Consensus         2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd   81 (368)
T TIGR02818         2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD   81 (368)
T ss_pred             ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence            88999999888899999999999999999999999999999999888765556799999999999999999999999999


Q ss_pred             EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336           84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  163 (373)
Q Consensus        84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~  163 (373)
                      ||++.+..+|+.|.+|+.|+++.|.+.......|+. .+|..++..+|..++++.+.|+|+||+.+++..++++|+++++
T Consensus        82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~  160 (368)
T TIGR02818        82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL  160 (368)
T ss_pred             EEEEcCCCCCCCChhhhCCCcccccCcccccccccc-cCCccccccCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence            999999999999999999999999874322112322 1221222233333333334579999999999999999999999


Q ss_pred             hhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCC
Q 017336          164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH  243 (373)
Q Consensus       164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~  243 (373)
                      ++++.+++++.|||+++.+++.++++++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|++.++++.+.
T Consensus       161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~  240 (368)
T TIGR02818       161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDY  240 (368)
T ss_pred             HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccccc
Confidence            99999999999999998788899999999999999999999999999999779999999999999999999998887653


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCCCC
Q 017336          244 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRT  323 (373)
Q Consensus       244 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~  323 (373)
                      +..+.+.+++.+++++|++||++|++..+..+++++++++|+++.+|.......+......+.++..+.++..+......
T Consensus       241 ~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  320 (368)
T TIGR02818       241 DKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRT  320 (368)
T ss_pred             chhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCCcHH
Confidence            33466777777777899999999987888999999987339999999754222333333333344456776544333345


Q ss_pred             CHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336          324 DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  371 (373)
Q Consensus       324 ~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~  371 (373)
                      ++.++++++.++++.++++++++|+|+++++|++.+.+++..|++|++
T Consensus       321 ~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~  368 (368)
T TIGR02818       321 ELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY  368 (368)
T ss_pred             HHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence            689999999999998888899999999999999999888777999875

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=5.4e-55  Score=414.52  Aligned_cols=371  Identities=52%  Similarity=1.009  Sum_probs=306.1

Q ss_pred             CcccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCC
Q 017336            1 MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDL   79 (373)
Q Consensus         1 m~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~   79 (373)
                      |.+|||+++..+++++++++++.|.|+++||+|||.++|+|++|++.+.|..+ ...+|.++|||++|+|+++|++++.|
T Consensus         8 ~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~   87 (381)
T PLN02740          8 VITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEDL   87 (381)
T ss_pred             ceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCcC
Confidence            45799999999887789999999999999999999999999999999888653 24578999999999999999999999


Q ss_pred             CCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCC--CccccccCCcceeeEEEEecCceEeC
Q 017336           80 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSING--EPVNHFLGTSTFSEYTVVHSGCVAKI  157 (373)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g--~~~~~~~~~G~~a~~~~v~~~~~~~~  157 (373)
                      ++||||++.+..+|+.|.+|+++.++.|++....+..+....+|..++...|  ....+....|+|+||+.+++++++++
T Consensus        88 ~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~i  167 (381)
T PLN02740         88 KAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKI  167 (381)
T ss_pred             CCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEEC
Confidence            9999999999999999999999999999986543221111001111111000  00011112479999999999999999


Q ss_pred             CCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee
Q 017336          158 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF  237 (373)
Q Consensus       158 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v  237 (373)
                      |+++++++++.+++++.|||+++.+.+.++++++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|++.+
T Consensus       168 P~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~  247 (381)
T PLN02740        168 DPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDF  247 (381)
T ss_pred             CCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEE
Confidence            99999999999999999999987788899999999999999999999999999999679999999999999999999998


Q ss_pred             ecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEecc
Q 017336          238 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFG  317 (373)
Q Consensus       238 i~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~  317 (373)
                      +++.+.+.++.+.+++.+++++|++||++|++..+..+++++++++|+++.+|.......+.+....+.+++++.|+..+
T Consensus       248 i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~  327 (381)
T PLN02740        248 INPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITGSVFG  327 (381)
T ss_pred             EecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEEEecC
Confidence            88765433477778877766899999999988889999999988339999999865433344444334478899998776


Q ss_pred             CCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336          318 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  371 (373)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~  371 (373)
                      .+....++.++++++.++++++.++++++|+|+|+++|++.+.+++..|++|.+
T Consensus       328 ~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~  381 (381)
T PLN02740        328 DFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL  381 (381)
T ss_pred             CCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence            554445688999999999998888899999999999999999988888999864

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=7.5e-55  Score=412.41  Aligned_cols=361  Identities=40%  Similarity=0.714  Sum_probs=302.4

Q ss_pred             cchhhhccCCC--------CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCC
Q 017336            4 TAAAVAWEAGK--------PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG   75 (373)
Q Consensus         4 ~~a~~~~~~~~--------~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~   75 (373)
                      |||+++.+++.        .+++++++.|+|+++||+|||.+++||++|++.+.|..+ ..+|.++|||++|+|+++|++
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~   79 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG   79 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence            79999998763        389999999999999999999999999999999888653 356899999999999999999


Q ss_pred             CCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceE
Q 017336           76 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVA  155 (373)
Q Consensus        76 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~  155 (373)
                      ++.|++||||++.+..+|+.|..|++|++|.|++.......|.. .+|..++..++.-+.+..+.|+|+||+.++++.++
T Consensus        80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~  158 (371)
T cd08281          80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTL-LSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV  158 (371)
T ss_pred             CCcCCCCCEEEEccCCCCCCCccccCCCcccccCcccccccccc-ccCcccccccCcccccccCcccceeeEEecccceE
Confidence            99999999999988889999999999999999876544322322 11111122222222222334799999999999999


Q ss_pred             eCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc
Q 017336          156 KINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT  235 (373)
Q Consensus       156 ~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~  235 (373)
                      ++|+++++++++.++++++|||+++.+.+.++++++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|++
T Consensus       159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~  238 (371)
T cd08281         159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGAT  238 (371)
T ss_pred             ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCc
Confidence            99999999999999999999999887888999999999999999999999999999996799999999999999999999


Q ss_pred             eeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEE
Q 017336          236 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGT  314 (373)
Q Consensus       236 ~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~  314 (373)
                      .++++.+.+  +.+.+++.+++++|++|||+|.+..+..++++++++ |+++.+|.......+.++...+ .+++++.|+
T Consensus       239 ~~i~~~~~~--~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  315 (371)
T cd08281         239 ATVNAGDPN--AVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGS  315 (371)
T ss_pred             eEeCCCchh--HHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEE
Confidence            999876654  778888887778999999999878899999999997 9999999765333344444434 389999998


Q ss_pred             eccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEE
Q 017336          315 FFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII  369 (373)
Q Consensus       315 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~  369 (373)
                      ..+.+...+++.++++++.++++++.++++++|+|+++++|++.+.+++..|.++
T Consensus       316 ~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi  370 (371)
T cd08281         316 YMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI  370 (371)
T ss_pred             ecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence            7665444457889999999999998888999999999999999999988765543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=1.4e-54  Score=410.55  Aligned_cols=367  Identities=77%  Similarity=1.293  Sum_probs=308.0

Q ss_pred             ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      +|||+++..++++++++++++|+|+++||+|||.++++|++|++.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   81 (369)
T cd08301           2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKPG   81 (369)
T ss_pred             ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCccccC
Confidence            79999999988889999999999999999999999999999999988876656779999999999999999999999999


Q ss_pred             CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336           83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  162 (373)
Q Consensus        83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~  162 (373)
                      |||++.+..+|+.|..|++++++.|.+.......|....++...+...|...+++...|+|+||+.+++..++++|++++
T Consensus        82 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~  161 (369)
T cd08301          82 DHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAP  161 (369)
T ss_pred             CEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCCC
Confidence            99999999999999999999999998754332223221122122222222222222347999999999999999999999


Q ss_pred             chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336          163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  242 (373)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~  242 (373)
                      +++++.+++++.|||+++++.++++++++|||+|+|++|++++|+|+.+|+.+|+++++++++++.++++|++.++++.+
T Consensus       162 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~  241 (369)
T cd08301         162 LDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKD  241 (369)
T ss_pred             HHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccc
Confidence            99999999999999998888889999999999999999999999999999867999999999999999999998888765


Q ss_pred             CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCCC
Q 017336          243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR  322 (373)
Q Consensus       243 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  322 (373)
                      .+..+.+.+++.+++++|++||++|++..+..+++++++++|+++.+|.......+.+....+.+++++.|+..+.+..+
T Consensus       242 ~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  321 (369)
T cd08301         242 HDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKPK  321 (369)
T ss_pred             cchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCChH
Confidence            33336677777777689999999998778899999999932999999987543344444443457899999877665555


Q ss_pred             CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEE
Q 017336          323 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII  369 (373)
Q Consensus       323 ~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~  369 (373)
                      ++++++++++.++++++.++++++|+|+++++|++.+.+++..|++|
T Consensus       322 ~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~  368 (369)
T cd08301         322 TDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCIL  368 (369)
T ss_pred             HHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEe
Confidence            57889999999999988888999999999999999999998888886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=1.6e-54  Score=409.80  Aligned_cols=367  Identities=55%  Similarity=0.973  Sum_probs=305.2

Q ss_pred             ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      +|||+++...+++++++++|.|.|+++||+|||+++++|++|++.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG   81 (368)
T cd08300           2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG   81 (368)
T ss_pred             cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence            68999999888889999999999999999999999999999999988876656789999999999999999999999999


Q ss_pred             CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336           83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  162 (373)
Q Consensus        83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~  162 (373)
                      |||++.+..+|+.|.+|++++++.|++.......|.. ++|..++..+|....++.+.|+|+||+.++++.++++|++++
T Consensus        82 drV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~  160 (368)
T cd08300          82 DHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLM-PDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP  160 (368)
T ss_pred             CEEEEcCCCCCCCChhhcCCCcCcCCCcccccccccc-CCCccccccCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence            9999999999999999999999999875432222322 122112222232222333457999999999999999999999


Q ss_pred             chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336          163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  242 (373)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~  242 (373)
                      +++++.+++++.|||+++.+.+.++++++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|++.++++.+
T Consensus       161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~  240 (368)
T cd08300         161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD  240 (368)
T ss_pred             hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence            99999999999999998777788999999999999999999999999999967999999999999999999999998766


Q ss_pred             CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCCC
Q 017336          243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR  322 (373)
Q Consensus       243 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  322 (373)
                      .+.++.+.+++.+++++|+|||++|++..+..+++++++++|+++.+|.......+......+.+...+.++..+.+...
T Consensus       241 ~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  320 (368)
T cd08300         241 HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKSR  320 (368)
T ss_pred             cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecccCcH
Confidence            43347777888877789999999998778999999998744999999976422223333333334456777766555555


Q ss_pred             CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEe
Q 017336          323 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS  370 (373)
Q Consensus       323 ~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~  370 (373)
                      +++.++++++.++++.+.++++++|+|+++++|++.+.+++..|++++
T Consensus       321 ~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~  368 (368)
T cd08300         321 SQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK  368 (368)
T ss_pred             HHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence            678999999999999888889999999999999999988887888874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=2.1e-53  Score=402.70  Aligned_cols=366  Identities=57%  Similarity=1.025  Sum_probs=300.9

Q ss_pred             ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      .|||+++.++++.+++++++.|.|+++||+|||.++|+|++|++.+.+.   ..+|.++|||++|+|+++|++++.|++|
T Consensus        12 ~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~---~~~p~i~GhE~~G~V~~vG~~v~~~~~G   88 (378)
T PLN02827         12 TCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ---ALFPRIFGHEASGIVESIGEGVTEFEKG   88 (378)
T ss_pred             eeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCC---CCCCeeecccceEEEEEcCCCCcccCCC
Confidence            4899999888777999999999999999999999999999999987663   2468899999999999999999999999


Q ss_pred             CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336           83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  162 (373)
Q Consensus        83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~  162 (373)
                      |+|++.+..+|+.|.+|++|++++|++.... ..|....+....+...|..+++....|+|+||+.++++.++++|++++
T Consensus        89 drV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l~  167 (378)
T PLN02827         89 DHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAP  167 (378)
T ss_pred             CEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCCC
Confidence            9999999999999999999999999864221 012111111111222222222222347999999999999999999999


Q ss_pred             chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336          163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  242 (373)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~  242 (373)
                      +++++.+++++.++|+++++.++++++++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++.++++.+
T Consensus       168 ~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~  247 (378)
T PLN02827        168 LHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPND  247 (378)
T ss_pred             HHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccc
Confidence            99999998888999987777788999999999999999999999999999967888888999999999999999988765


Q ss_pred             CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCCC
Q 017336          243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR  322 (373)
Q Consensus       243 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  322 (373)
                      .+..+.+.+++.+++++|++||++|.+..+..+++.+++++|+++.+|.......+......+.+++++.|+....+...
T Consensus       248 ~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  327 (378)
T PLN02827        248 LSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGWKPK  327 (378)
T ss_pred             cchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCCCchh
Confidence            32337777887776689999999998778899999999933999999986533222222223458999999876655444


Q ss_pred             CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEecC
Q 017336          323 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME  372 (373)
Q Consensus       323 ~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~~  372 (373)
                      .++.++++++.++++++.++++++|+|+++++|++.+.+++..|+||.++
T Consensus       328 ~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~  377 (378)
T PLN02827        328 SDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHMP  377 (378)
T ss_pred             hhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEec
Confidence            57889999999999988778999999999999999999888789999875

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=5.3e-53  Score=398.01  Aligned_cols=356  Identities=37%  Similarity=0.626  Sum_probs=299.1

Q ss_pred             ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      +|||+++.++++++++++++.|.|+++||+|||.++++|++|++.+.|..+ ..+|.++|||++|+|+++|+++++|++|
T Consensus         1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G   79 (358)
T TIGR03451         1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPG   79 (358)
T ss_pred             CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCC
Confidence            699999999998899999999999999999999999999999998887543 3478999999999999999999999999


Q ss_pred             CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336           83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  162 (373)
Q Consensus        83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~  162 (373)
                      |+|++.+..+|+.|..|.+|+++.|...... ..+....+|        .......+.|+|+||+.++++.++++|++++
T Consensus        80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~-~~~~~~~~g--------~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~  150 (358)
T TIGR03451        80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNA-TQKMTLTDG--------TELSPALGIGAFAEKTLVHAGQCTKVDPAAD  150 (358)
T ss_pred             CEEEEccCCCCCCChHHhCcCcccCcCcccc-ccccccccC--------cccccccccccccceEEEehhheEECCCCCC
Confidence            9999999999999999999999999753211 000000001        0000001247999999999999999999999


Q ss_pred             chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336          163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  242 (373)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~  242 (373)
                      +++++.+++.+.+||.++.+.+.++++++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|++.++++.+
T Consensus       151 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~  230 (358)
T TIGR03451       151 PAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG  230 (358)
T ss_pred             hhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC
Confidence            99999999999999988777888999999999999999999999999999966999999999999999999999998876


Q ss_pred             CCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccch-hhcccceEEEEeccCCC
Q 017336          243 HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYK  320 (373)
Q Consensus       243 ~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~  320 (373)
                      .+  +.+.+.+.+++ ++|++|||+|++..+..++++++++ |+++.+|.......+.++.. .+.+++++.++..+...
T Consensus       231 ~~--~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  307 (358)
T TIGR03451       231 TD--PVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCL  307 (358)
T ss_pred             cC--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCC
Confidence            55  77888888876 8999999999877899999999997 99999998653323344433 23488899888654333


Q ss_pred             CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336          321 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  371 (373)
Q Consensus       321 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~  371 (373)
                      ..++++++++++.++++++.++++++|+|+++++|++.+.+++..|+++.+
T Consensus       308 ~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~~  358 (358)
T TIGR03451       308 PERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVEL  358 (358)
T ss_pred             cHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEeC
Confidence            345788999999999998888899999999999999999988877888753

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=1.7e-52  Score=395.52  Aligned_cols=364  Identities=57%  Similarity=0.996  Sum_probs=303.7

Q ss_pred             ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      .|||+++...+++++++++|.|.|+++||+|||.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++.+++|
T Consensus         2 ~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G   80 (365)
T cd08277           2 KCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKPG   80 (365)
T ss_pred             ccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCCC
Confidence            689999998888899999999999999999999999999999999887554 4578999999999999999999999999


Q ss_pred             CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336           83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  162 (373)
Q Consensus        83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~  162 (373)
                      |+|++.+..+|+.|.+|.+|.++.|++..+... |.. .++..+....|...+.+.+.|+|+||+.++++.++++|++++
T Consensus        81 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~-g~~-~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~  158 (365)
T cd08277          81 DKVIPLFIGQCGECSNCRSGKTNLCQKYRANES-GLM-PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAP  158 (365)
T ss_pred             CEEEECCCCCCCCCchhcCcCcccCcCcccccc-ccc-cCCccccccCCcccccccccccceeeEEEchhheEECCCCCC
Confidence            999999999999999999999999998654421 221 122122222232222233457999999999999999999999


Q ss_pred             chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336          163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  242 (373)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~  242 (373)
                      +++++.++++++|||+++.+.+.++++++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|++.+++..+
T Consensus       159 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~  238 (365)
T cd08277         159 LEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKD  238 (365)
T ss_pred             HHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEecccc
Confidence            99999999999999998778889999999999999999999999999999977999999999999999999999888765


Q ss_pred             CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCCC
Q 017336          243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR  322 (373)
Q Consensus       243 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  322 (373)
                      .+..+.+.+++.+++++|+|||++|+...+..+++++++++|+++.+|.... ....+....+..++++.|+..+.+...
T Consensus       239 ~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~  317 (365)
T cd08277         239 SDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG-AELSIRPFQLILGRTWKGSFFGGFKSR  317 (365)
T ss_pred             ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCc-cccccCHhHHhhCCEEEeeecCCCChH
Confidence            4333567777777678999999999878889999999873499999998642 223333333445788888877665444


Q ss_pred             CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEe
Q 017336          323 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS  370 (373)
Q Consensus       323 ~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~  370 (373)
                      .++.++++++.++++++.++++++|+|+|+++|++.+.+++..|++++
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~  365 (365)
T cd08277         318 SDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT  365 (365)
T ss_pred             HHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence            578999999999999888889999999999999999988887788874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=6.6e-52  Score=388.03  Aligned_cols=337  Identities=29%  Similarity=0.467  Sum_probs=288.2

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      |||+++..++. +++++++.|.|+++||+||+.++++|++|++.+.+.+. ...+|.++|||++|+|+++|++++.|++|
T Consensus         1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   79 (339)
T cd08239           1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG   79 (339)
T ss_pred             CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence            78999887654 99999999999999999999999999999998776533 23358899999999999999999999999


Q ss_pred             CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336           83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  162 (373)
Q Consensus        83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~  162 (373)
                      |+|++.+..+|++|+.|+.|+++.|.+..+.  .|.                   ...|+|+||+.+++++++++|++++
T Consensus        80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~--~g~-------------------~~~G~~ae~~~v~~~~~~~~P~~~~  138 (339)
T cd08239          80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRAA--YGW-------------------NRDGGHAEYMLVPEKTLIPLPDDLS  138 (339)
T ss_pred             CEEEECCCCCCCCChhhhCcCcccCcCcccc--ccc-------------------CCCCcceeEEEechHHeEECCCCCC
Confidence            9999999999999999999999999865431  121                   1236999999999999999999999


Q ss_pred             chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336          163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  242 (373)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~  242 (373)
                      +++++.++++++|||+++ ..+.+.++++|||+|+|++|++++|+|+.+|+++|++++++++|++.++++|++.++++++
T Consensus       139 ~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~  217 (339)
T cd08239         139 FADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ  217 (339)
T ss_pred             HHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc
Confidence            999999999999999986 5678899999999999999999999999999955999999999999999999999988765


Q ss_pred             CCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCC
Q 017336          243 HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP  321 (373)
Q Consensus       243 ~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  321 (373)
                      .+   .+.+.+.+++ ++|++||++|+...+..++++++++ |+++.+|.... ..+......+.+++++.|+....   
T Consensus       218 ~~---~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~---  289 (339)
T cd08239         218 DD---VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGE-LTIEVSNDLIRKQRTLIGSWYFS---  289 (339)
T ss_pred             ch---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-cccCcHHHHHhCCCEEEEEecCC---
Confidence            43   4556667766 8999999999977778999999997 99999997542 22222222344889999987543   


Q ss_pred             CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336          322 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  371 (373)
Q Consensus       322 ~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~  371 (373)
                      .+++.++++++.++++.+.++++++|+|+++++|++.+.+++.+|+++++
T Consensus       290 ~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~  339 (339)
T cd08239         290 VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF  339 (339)
T ss_pred             HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence            34689999999999998888899999999999999999888777999874

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=2.9e-50  Score=375.64  Aligned_cols=343  Identities=30%  Similarity=0.435  Sum_probs=280.7

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCc-cccccceEEEEEeCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPR-IFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~-i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      ||+++++.++...++++.+.|.+.|+||+|||.++|||+||++.+++..+....|. ++|||++|+|+++| .++.+++|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G   79 (350)
T COG1063           1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG   79 (350)
T ss_pred             CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence            56777777666455778877888999999999999999999999999777666666 99999999999999 77889999


Q ss_pred             CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCc-eEeCCCCC
Q 017336           83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGC-VAKINPLA  161 (373)
Q Consensus        83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~-~~~~p~~~  161 (373)
                      |||++.+..+|+.|++|+.|.+|.|++.++.   |.....              ....|+|+||+.+|.++ +.++|+++
T Consensus        80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~---g~~~~~--------------~~~~G~~aEyv~vp~~~~~~~~pd~~  142 (350)
T COG1063          80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFY---GYAGLG--------------GGIDGGFAEYVRVPADFNLAKLPDGI  142 (350)
T ss_pred             CEEEECCCcCCCCChhHhCcCcccCCCcccc---cccccc--------------CCCCCceEEEEEeccccCeecCCCCC
Confidence            9999999999999999999999999976544   222100              00136999999999755 44558888


Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecC
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNT  240 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~  240 (373)
                       +.+++++..++.++|++........++.+|+|+|+|++|++++++++.+|+.+|++++.+++|++++++ .+++.+++.
T Consensus       143 -~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~  221 (350)
T COG1063         143 -DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNP  221 (350)
T ss_pred             -ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecC
Confidence             667777777999997763344555556699999999999999999999999999999999999999999 667766665


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-hhhcccceEEEEeccC
Q 017336          241 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGN  318 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~  318 (373)
                      .+.+  ....+.+.+++ ++|++|||+|.+..+..+++.++++ |+++++|....... .+.. ..+.+++++.|+..  
T Consensus       222 ~~~~--~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~--  295 (350)
T COG1063         222 SEDD--AGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLR--  295 (350)
T ss_pred             cccc--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEeccC--
Confidence            5543  67778888888 9999999999988999999999997 99999999865443 2322 23459999999842  


Q ss_pred             CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc--eeEEEec
Q 017336          319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG--LRCIISM  371 (373)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~--~k~v~~~  371 (373)
                      .....++..+++++.+|++.+.+++++.++++++++|++.+.+.+.  .|+++.+
T Consensus       296 ~~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         296 PSGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             CCCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            1223579999999999999999999999999999999999987653  4888763

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-50  Score=377.72  Aligned_cols=335  Identities=21%  Similarity=0.330  Sum_probs=275.9

Q ss_pred             ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccc-cCCC--CCCCCccccccceEEEEEeCCCCCCC
Q 017336            3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-SKGQ--TPLFPRIFGHEAAGVVESVGEGVSDL   79 (373)
Q Consensus         3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-g~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~   79 (373)
                      .+||++++.++. +++++++.| ++++||||||.++|||++|++.+. |..+  ...+|.++|||++|+|+++  +++.|
T Consensus         4 ~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~~   79 (343)
T PRK09880          4 KTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGL   79 (343)
T ss_pred             cceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCccC
Confidence            478999887777 999999997 689999999999999999999875 3322  2357999999999999999  67899


Q ss_pred             CCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC
Q 017336           80 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP  159 (373)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~  159 (373)
                      ++||||++.+..+|+.|++|++|+++.|++..+.   |....+              ....|+|+||++++++.++++|+
T Consensus        80 ~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~---g~~~~~--------------~~~~G~~aey~~v~~~~~~~~P~  142 (343)
T PRK09880         80 KEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFF---GSAMYF--------------PHVDGGFTRYKVVDTAQCIPYPE  142 (343)
T ss_pred             CCCCEEEECCCCCCcCChhhcCCChhhCCCccee---eccccc--------------CCCCCceeeeEEechHHeEECCC
Confidence            9999999999999999999999999999875543   321000              01136999999999999999999


Q ss_pred             CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      ++++++++ +..++++||+++. .....++++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|++.+++
T Consensus       143 ~l~~~~aa-~~~~~~~a~~al~-~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~  220 (343)
T PRK09880        143 KADEKVMA-FAEPLAVAIHAAH-QAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVN  220 (343)
T ss_pred             CCCHHHHH-hhcHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEec
Confidence            99987655 4457889999864 456668999999999999999999999999977999999999999999999999998


Q ss_pred             CCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccC
Q 017336          240 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGN  318 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~  318 (373)
                      +++.+  +.+.. +. .+++|++||++|++..+..++++++++ |+++.+|......  .++... +.+++++.|+... 
T Consensus       221 ~~~~~--~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~--~~~~~~~~~k~~~i~g~~~~-  292 (343)
T PRK09880        221 PQNDD--LDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGAPP--EFPMMTLIVKEISLKGSFRF-  292 (343)
T ss_pred             CCccc--HHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCC--ccCHHHHHhCCcEEEEEeec-
Confidence            77654  43322 22 236999999999877889999999997 9999999754322  233333 3488999987642 


Q ss_pred             CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                         .+++.++++++.++++++.++++++|+|+++++|++.+.+++. +|+++++
T Consensus       293 ---~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        293 ---TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             ---cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence               3579999999999999888889999999999999999988764 6998864

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=4.1e-50  Score=369.79  Aligned_cols=315  Identities=27%  Similarity=0.387  Sum_probs=265.6

Q ss_pred             cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccC-CCCCCCCccccccceEEEEEeCCCCCCCC
Q 017336            4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~-~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |||+++.+.++|  ++++++|.|.|+++||||||.+++||+.|+..++|. .+..++|.|+|.|++|+|+++|++|+.|+
T Consensus         1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~   80 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK   80 (326)
T ss_pred             CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence            788888888876  888999999999999999999999999999999986 34456899999999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||||+... ..                        +                     ..|+|+||+.+|++.++++|++
T Consensus        81 ~GdrV~~~~-~~------------------------~---------------------~~G~~AEy~~v~a~~~~~~P~~  114 (326)
T COG0604          81 VGDRVAALG-GV------------------------G---------------------RDGGYAEYVVVPADWLVPLPDG  114 (326)
T ss_pred             CCCEEEEcc-CC------------------------C---------------------CCCcceeEEEecHHHceeCCCC
Confidence            999999652 00                        0                     1369999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      +|+++||+++++++|||+++....+++++++|||+|+ |++|.+++||||++|+ .++++.+++++.++++++|++++++
T Consensus       115 ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~  193 (326)
T COG0604         115 LSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVIN  193 (326)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEc
Confidence            9999999999999999999988899999999999986 9999999999999998 6666667777777999999999999


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc-ccceEEEEecc
Q 017336          240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFG  317 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~  317 (373)
                      +.+.+  |.+.+++++++ ++|+|||++|+ +.+..++++|+++ |+++.+|..++.....++...+. +.++..+....
T Consensus       194 y~~~~--~~~~v~~~t~g~gvDvv~D~vG~-~~~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~  269 (326)
T COG0604         194 YREED--FVEQVRELTGGKGVDVVLDTVGG-DTFAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLG  269 (326)
T ss_pred             CCccc--HHHHHHHHcCCCCceEEEECCCH-HHHHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecce
Confidence            88887  99999999998 89999999999 7888899999997 99999999874223333333333 77777777654


Q ss_pred             CC---CCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcC-C-ceeEEEec
Q 017336          318 NY---KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG-E-GLRCIISM  371 (373)
Q Consensus       318 ~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~-~-~~k~v~~~  371 (373)
                      ..   ...+.+.++.+++.+|++++.  ++++|||++..++......+ + .+|++|++
T Consensus       270 ~~~~~~~~~~~~~l~~~~~~g~l~~~--i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         270 SRDPEALAEALAELFDLLASGKLKPV--IDRVYPLAEAPAAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             ecchHHHHHHHHHHHHHHHcCCCcce--eccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence            33   112356778999999977654  78999999976666655444 4 56999864

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=9.9e-50  Score=378.26  Aligned_cols=345  Identities=23%  Similarity=0.320  Sum_probs=272.7

Q ss_pred             ccchhhhccCCCCeEEEEeecCCCC-------CCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCC
Q 017336            3 STAAAVAWEAGKPLIIQDVEVAPPQ-------AMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG   75 (373)
Q Consensus         3 ~~~a~~~~~~~~~~~~~~~~~p~~~-------~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~   75 (373)
                      -|||+++..+++ +++++++.|+|+       ++||||||.++|||++|++.+.|..+ ..+|.++|||++|+|+++|++
T Consensus         2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~   79 (393)
T TIGR02819         2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRD   79 (393)
T ss_pred             CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCc
Confidence            589999888776 999999999874       68999999999999999999887543 357899999999999999999


Q ss_pred             CCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccC---cccccccCCCcccccCCCccccccCCcceeeEEEEecC
Q 017336           76 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINP---VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG  152 (373)
Q Consensus        76 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~---~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~  152 (373)
                      |+.|++||||++.+..+|+.|++|++|++|.|.+.....   ..|+.         ..|      .-.|+|+||+.+++.
T Consensus        80 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~---------~~~------~~~G~~aey~~v~~~  144 (393)
T TIGR02819        80 VEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYV---------DMG------GWVGGQSEYVMVPYA  144 (393)
T ss_pred             cccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceeccc---------ccC------CCCCceEEEEEechh
Confidence            999999999999999999999999999999998642110   01110         000      013699999999964


Q ss_pred             --ceEeCCCCCCc----hhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHH
Q 017336          153 --CVAKINPLAPL----DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF  226 (373)
Q Consensus       153 --~~~~~p~~~~~----~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~  226 (373)
                        .++++|++++.    ..++.+.+++.++|+++ .+..+.++++|||.|+|++|++++|+|+.+|++.|++++++++|+
T Consensus       145 ~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~  223 (393)
T TIGR02819       145 DFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARL  223 (393)
T ss_pred             hCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH
Confidence              79999998754    34667778899999985 457899999999998999999999999999996677677888999


Q ss_pred             HHHHhcCCceeecCC-CCCccHHHHHHHHcCC-CccEEEEccCCh--------------HhHHHHHHHhhcCCcEEEEEc
Q 017336          227 EEAKKFGVTDFVNTS-EHDRPIQEVIAEMTNG-GVDRSVECTGNI--------------DNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       227 ~~~~~lg~~~vi~~~-~~~~~~~~~~~~~~~~-~~d~vid~~g~~--------------~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      ++++++|++. +++. +.+  +.+.+.+.+++ ++|++||++|.+              ..++.++++++++ |+++.+|
T Consensus       224 ~~a~~~Ga~~-v~~~~~~~--~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G  299 (393)
T TIGR02819       224 AQARSFGCET-VDLSKDAT--LPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPG  299 (393)
T ss_pred             HHHHHcCCeE-EecCCccc--HHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEee
Confidence            9999999974 4433 223  66777777776 899999999985              3799999999997 9999999


Q ss_pred             CCCC-Cc-ee---------eccchh-hcccceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCcee-eeeccccHHHHHH
Q 017336          291 VPSK-DA-VF---------MTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT-HRIPFSEINKAFE  357 (373)
Q Consensus       291 ~~~~-~~-~~---------~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-~~~~l~~~~~a~~  357 (373)
                      .... +. ..         .+.... +.+++++.++.   ....+.+.++++++.++++++.++++ ++|+|+++++|++
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~  376 (393)
T TIGR02819       300 LYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYA  376 (393)
T ss_pred             ecCCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHH
Confidence            8631 11 11         111111 12455555532   11112346799999999999887777 7899999999999


Q ss_pred             HHHcCCceeEEEecC
Q 017336          358 YMVKGEGLRCIISME  372 (373)
Q Consensus       358 ~l~~~~~~k~v~~~~  372 (373)
                      .+.+++..|++|++.
T Consensus       377 ~~~~~~~~Kvvi~~~  391 (393)
T TIGR02819       377 EFDAGAAKKFVIDPH  391 (393)
T ss_pred             HHhhCCceEEEEeCC
Confidence            998887789999763

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-48  Score=365.31  Aligned_cols=339  Identities=23%  Similarity=0.353  Sum_probs=279.7

Q ss_pred             cchhhhccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      |||+++.+++. +++.+.+.|.| +++||+|||.++++|++|+..+.... ...+|.++|||++|+|+++|+++++|++|
T Consensus         1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~vG   78 (347)
T PRK10309          1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLHPG   78 (347)
T ss_pred             CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-CCCCCcccccceEEEEEEeCCCCCCCCCC
Confidence            68999988775 99999999998 59999999999999999987532211 12358899999999999999999999999


Q ss_pred             CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336           83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  162 (373)
Q Consensus        83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~  162 (373)
                      |+|++.+..+|+.|++|..|.++.|.+..+.   |.                   ...|+|+||+.++++.++++|++++
T Consensus        79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~---g~-------------------~~~G~~aey~~v~~~~~~~lP~~~s  136 (347)
T PRK10309         79 DAVACVPLLPCFTCPECLRGFYSLCAKYDFI---GS-------------------RRDGGNAEYIVVKRKNLFALPTDMP  136 (347)
T ss_pred             CEEEECCCcCCCCCcchhCcCcccCCCccee---cc-------------------CCCCccceeEEeehHHeEECcCCCC
Confidence            9999999999999999999999999764322   21                   1236999999999999999999999


Q ss_pred             chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336          163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  242 (373)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~  242 (373)
                      +++++.+. .+.++|++ .....++++++|||+|+|++|++++|+|+.+|++.|+++++++++++.++++|++.++++++
T Consensus       137 ~~~aa~~~-~~~~~~~~-~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~  214 (347)
T PRK10309        137 IEDGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE  214 (347)
T ss_pred             HHHhhhhh-HHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc
Confidence            99988774 45667776 46678899999999999999999999999999966889999999999999999999888765


Q ss_pred             CCccHHHHHHHHcCC-Ccc-EEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc--hhhcccceEEEEeccC
Q 017336          243 HDRPIQEVIAEMTNG-GVD-RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP--INVLNERTLKGTFFGN  318 (373)
Q Consensus       243 ~~~~~~~~~~~~~~~-~~d-~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~--~~~~~~~~i~g~~~~~  318 (373)
                      .+   .+.+.+.+.+ ++| ++|||+|++..+..++++++++ |+++.+|.......+....  ..+.+++++.|+..+.
T Consensus       215 ~~---~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  290 (347)
T PRK10309        215 MS---APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNY  290 (347)
T ss_pred             cC---HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccc
Confidence            43   3445566655 888 9999999978899999999997 9999999765332222111  2234889999987543


Q ss_pred             CC--CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336          319 YK--PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       319 ~~--~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                      ..  ..+++++++++++++++++.++++++|+|+++++|++.+.+++. +|++++++
T Consensus       291 ~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  347 (347)
T PRK10309        291 SSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQIP  347 (347)
T ss_pred             cCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeCC
Confidence            22  13568899999999999888889999999999999999988874 69998763

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=8.1e-48  Score=364.18  Aligned_cols=366  Identities=48%  Similarity=0.843  Sum_probs=297.0

Q ss_pred             ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      +|||.+++.++++++++++|.|.|.++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++.+++|
T Consensus         7 ~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~G   85 (373)
T cd08299           7 KCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVKPG   85 (373)
T ss_pred             eeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccCCCC
Confidence            588999898888899999999999999999999999999999999887653 3568899999999999999999999999


Q ss_pred             CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336           83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  162 (373)
Q Consensus        83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~  162 (373)
                      |+|++.+..+|+.|.+|.+++.+.|++.......|.. .++..++...|.....+.+.|+|+||++++++.++++|++++
T Consensus        86 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l~  164 (373)
T cd08299          86 DKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLM-QDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAP  164 (373)
T ss_pred             CEEEECCCCCCCCChhhhCCCcccCcCcccccccccc-cCCccccccCCcccccccCCCcccceEEecccceeeCCCCCC
Confidence            9999999999999999999999999875432111221 111111212222222232357999999999999999999999


Q ss_pred             chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336          163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  242 (373)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~  242 (373)
                      +++++.+++++++||+++...+.++++++|||+|+|++|++++++|+.+|+++|+++++++++++.++++|++.+++..+
T Consensus       165 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~  244 (373)
T cd08299         165 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQD  244 (373)
T ss_pred             hHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccc
Confidence            99999999999999998778889999999999998999999999999999867999999999999999999998888765


Q ss_pred             CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHh-hcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCC
Q 017336          243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECV-HDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP  321 (373)
Q Consensus       243 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l-~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  321 (373)
                      .+.++.+.+.+.+++++|+++||+|++..+..++..+ +++ |+++.+|.......+.+....+.++.++.++..+.+..
T Consensus       245 ~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  323 (373)
T cd08299         245 YKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGWKS  323 (373)
T ss_pred             cchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCCcc
Confidence            4333566666666668999999999767777777765 465 99999997653333444443344677888887665554


Q ss_pred             CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336          322 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  371 (373)
Q Consensus       322 ~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~  371 (373)
                      .+++.++++.+.++.+.+.+++++.|+++++.+|++.+.+++..|+++++
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~  373 (373)
T cd08299         324 KDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF  373 (373)
T ss_pred             HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence            45677888888888777777789999999999999999887777888764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=3.6e-48  Score=364.76  Aligned_cols=337  Identities=22%  Similarity=0.354  Sum_probs=269.6

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   83 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   83 (373)
                      +.++.+++.++.+++.+++.|.|+++||+|||.++|+|++|++.+.|.++...+|.++|||++|+|+++|++++.|++||
T Consensus        13 ~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~vGd   92 (360)
T PLN02586         13 AFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKFKEGD   92 (360)
T ss_pred             eeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCccCCCC
Confidence            44555666556688899999999999999999999999999999887655456789999999999999999999999999


Q ss_pred             EEeecCc-CCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336           84 HVLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  162 (373)
Q Consensus        84 ~V~~~~~-~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~  162 (373)
                      +|++.+. .+|+.|.+|++|.++.|++..+... +.. .+|             ....|+|+||+.++++.++++|++++
T Consensus        93 rV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~-~~~-~~g-------------~~~~G~~aey~~v~~~~~~~lP~~ls  157 (360)
T PLN02586         93 RVGVGVIVGSCKSCESCDQDLENYCPKMIFTYN-SIG-HDG-------------TKNYGGYSDMIVVDQHFVLRFPDNLP  157 (360)
T ss_pred             EEEEccccCcCCCCccccCCCcccCCCcccccc-ccc-cCC-------------CcCCCccceEEEEchHHeeeCCCCCC
Confidence            9986544 5799999999999999987543200 000 000             00136999999999999999999999


Q ss_pred             chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhH-HHHHHhcCCceeecCC
Q 017336          163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTDFVNTS  241 (373)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~-~~~~~~lg~~~vi~~~  241 (373)
                      +++++.+++.+.|+|+++.....++++++|||.|+|++|++++|+|+.+|+ +|++++.++++ .+.++++|++.++++.
T Consensus       158 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~vi~~~  236 (360)
T PLN02586        158 LDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRLGADSFLVST  236 (360)
T ss_pred             HHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhCCCcEEEcCC
Confidence            999999999999999987665667899999999999999999999999999 67777665544 5666889999888765


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCCC
Q 017336          242 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYK  320 (373)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~  320 (373)
                      +.     +.+++.++ ++|+|||++|++..+..++++++++ |+++.+|.....  ..++... +.++..+.++..+.  
T Consensus       237 ~~-----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~~~--~~~~~~~~~~~~~~i~g~~~~~--  305 (360)
T PLN02586        237 DP-----EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPEKP--LELPIFPLVLGRKLVGGSDIGG--  305 (360)
T ss_pred             CH-----HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCCCC--CccCHHHHHhCCeEEEEcCcCC--
Confidence            42     23444444 6999999999877889999999997 999999975433  2233333 33677777776432  


Q ss_pred             CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          321 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       321 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                       .+++.++++++.++++++.  + ++|+|+|+++|++.+.+++. +|+++++
T Consensus       306 -~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        306 -IKETQEMLDFCAKHNITAD--I-ELIRMDEINTAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             -HHHHHHHHHHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence             2468999999999988753  3 68999999999999998885 5998875

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=6.9e-48  Score=362.91  Aligned_cols=334  Identities=27%  Similarity=0.367  Sum_probs=263.5

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC---CCCCccccccceEEEEEeCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |||+++...+.+++++++|.|+|+++||||||+++|||++|++.++|.++.   ..+|.++|||++|+|+++|++ +.|+
T Consensus         1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~   79 (355)
T cd08230           1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS   79 (355)
T ss_pred             CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence            688888754444999999999999999999999999999999999886532   246789999999999999999 9999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||||++.+..+|+.|.+|++|+++.|++..+.. .|+.                  ...|+|+||+.++++.++++|++
T Consensus        80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~-~g~~------------------~~~G~~aey~~~~~~~~~~~P~~  140 (355)
T cd08230          80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTE-RGIK------------------GLHGFMREYFVDDPEYLVKVPPS  140 (355)
T ss_pred             CCCEEEeccccCCCcChhhhCcCcccCCCcceec-cCcC------------------CCCccceeEEEeccccEEECCCC
Confidence            9999999999999999999999999998654321 1211                  01369999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhh------hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcC---ChhHHHHHHh
Q 017336          161 APLDKVCILSCGVSTGLGATL------NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR---SSKRFEEAKK  231 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~------~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~---~~~~~~~~~~  231 (373)
                      ++ + ++.+..++.+++.++.      ......++++|||+|+|++|++++|+|+.+|+ +|+++++   +++|++++++
T Consensus       141 ~~-~-~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~  217 (355)
T cd08230         141 LA-D-VGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEE  217 (355)
T ss_pred             CC-c-ceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHH
Confidence            98 3 3444445555544322      12235789999999999999999999999999 7998887   6889999999


Q ss_pred             cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeecc----ch-hhc
Q 017336          232 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK----PI-NVL  306 (373)
Q Consensus       232 lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~----~~-~~~  306 (373)
                      +|++. +++.+.+  +.+ . . ..+++|+|||++|++..+..++++++++ |+++.+|.......+.+.    .. .+.
T Consensus       218 ~Ga~~-v~~~~~~--~~~-~-~-~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~  290 (355)
T cd08230         218 LGATY-VNSSKTP--VAE-V-K-LVGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVL  290 (355)
T ss_pred             cCCEE-ecCCccc--hhh-h-h-hcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhh
Confidence            99986 4554433  333 1 1 2248999999999877889999999997 999999987642333333    12 234


Q ss_pred             ccceEEEEeccCCCCCCCHHHHHHHHHcCCC----CCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336          307 NERTLKGTFFGNYKPRTDLPSVVDMYMNKQL----ELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  371 (373)
Q Consensus       307 ~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l----~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~  371 (373)
                      +++++.|+....   .+++.++++++.++.+    .+.++++++|+|+|+++|++.+.++. .|++|++
T Consensus       291 k~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~  355 (355)
T cd08230         291 GNKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE-IKVVIEW  355 (355)
T ss_pred             cCcEEEEecCCc---hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence            899999976432   3578889999988762    35667899999999999999887554 5998874

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=3.2e-47  Score=359.53  Aligned_cols=364  Identities=48%  Similarity=0.870  Sum_probs=308.4

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   83 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   83 (373)
                      .||+++.+++.++++++.+.|.++++||+|++.++++|++|++...+..+ ..+|.++|||++|+|+++|++++.+++||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd   79 (365)
T cd05279           1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGD   79 (365)
T ss_pred             CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCC
Confidence            37888898888899999999999999999999999999999998887543 34678999999999999999999999999


Q ss_pred             EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336           84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  163 (373)
Q Consensus        84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~  163 (373)
                      +|++.+..+|++|.+|++++.++|+...+....|.. .+|...+..+|....++.+.|+|++|+.++++.++++|+++++
T Consensus        80 ~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~  158 (365)
T cd05279          80 KVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPL  158 (365)
T ss_pred             EEEEcCCCCCCCChhhcCCCcccCCCcccccccccc-cCCcceeeccCCccccccccccccceEEecCCceEECCCCCCH
Confidence            999999999999999999999999987766444433 4555556555554444556689999999999999999999999


Q ss_pred             hhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCC
Q 017336          164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH  243 (373)
Q Consensus       164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~  243 (373)
                      ++++.+++++.+||+++...+.+.++++|||+|+|++|++++|+|+.+|+..|+++++++++.+.++++|++.+++..+.
T Consensus       159 ~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~  238 (365)
T cd05279         159 EKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQ  238 (365)
T ss_pred             HHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccc
Confidence            99999999999999988888899999999999889999999999999999668888889999999999999988887665


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhh-cCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCCC
Q 017336          244 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH-DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR  322 (373)
Q Consensus       244 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~-~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  322 (373)
                      +..+.+.+++.+++++|++||++|....+..++++++ ++ |+++.+|.........++...+.++.++.|+.+..+...
T Consensus       239 ~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~  317 (365)
T cd05279         239 DKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSK  317 (365)
T ss_pred             cchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCchH
Confidence            3237777877776689999999987788899999999 96 999999875422234444443456778888876666666


Q ss_pred             CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEe
Q 017336          323 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS  370 (373)
Q Consensus       323 ~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~  370 (373)
                      +.+.++++++.++.+++.++++++|+++++++|++.+.+++..|++++
T Consensus       318 ~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~~  365 (365)
T cd05279         318 DSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTILT  365 (365)
T ss_pred             hHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence            778999999999988876678899999999999999988777788764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=2.1e-47  Score=358.68  Aligned_cols=332  Identities=24%  Similarity=0.432  Sum_probs=277.7

Q ss_pred             hhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccC-CCCCCCCccccccceEEEEEeCCCCCCCCCCCEE
Q 017336            7 AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV   85 (373)
Q Consensus         7 ~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~-~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V   85 (373)
                      +++.+++.++++++.|.|.|+++||+|||.++++|++|++.+.+. .+...+|.++|||++|+|+++|++++.+ +||+|
T Consensus         2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV   80 (349)
T TIGR03201         2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV   80 (349)
T ss_pred             ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence            345667767899999999999999999999999999999876433 2234678999999999999999999887 99999


Q ss_pred             eecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC------
Q 017336           86 LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP------  159 (373)
Q Consensus        86 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~------  159 (373)
                      ++.+..+|+.|.+|++|+++.|.+....   |..                   ..|+|+||+.++++.++++|+      
T Consensus        81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~~---g~~-------------------~~G~~ae~~~v~~~~~~~ip~~~~~~~  138 (349)
T TIGR03201        81 IVPAVIPCGECELCKTGRGTICRAQKMP---GND-------------------MQGGFASHIVVPAKGLCVVDEARLAAA  138 (349)
T ss_pred             EECCCCCCCCChhhhCcCcccCCCCCcc---CcC-------------------CCCcccceEEechHHeEECCccccccc
Confidence            9999999999999999999999764322   211                   136999999999999999999      


Q ss_pred             CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      +++++.++.+++++.|+|+++. ...++++++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|++.+++
T Consensus       139 ~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~  216 (349)
T TIGR03201       139 GLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLN  216 (349)
T ss_pred             CCCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEec
Confidence            8999999999999999999864 5789999999999999999999999999999 7999999999999999999998888


Q ss_pred             CCCCC-ccHHHHHHHHcCC-Ccc----EEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEE
Q 017336          240 TSEHD-RPIQEVIAEMTNG-GVD----RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLK  312 (373)
Q Consensus       240 ~~~~~-~~~~~~~~~~~~~-~~d----~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~  312 (373)
                      +.+.+ .++.+.+++.+++ ++|    ++|||+|++..+..++++++++ |+++.+|.......+.  ...+ .++.++.
T Consensus       217 ~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~--~~~~~~~~~~~~  293 (349)
T TIGR03201       217 PKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAKTEYR--LSNLMAFHARAL  293 (349)
T ss_pred             CccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCCCcccC--HHHHhhcccEEE
Confidence            76542 2366777788876 776    8999999988888999999997 9999999865333232  2233 3677888


Q ss_pred             EEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336          313 GTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  370 (373)
Q Consensus       313 g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~  370 (373)
                      |++...   .+++.++++++.++++++.++++ .|+|+++++|++.+.+++. +|++++
T Consensus       294 g~~~~~---~~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~~~k~~~~  348 (349)
T TIGR03201       294 GNWGCP---PDRYPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHHKLKRRAILT  348 (349)
T ss_pred             EEecCC---HHHHHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcCCccceEEec
Confidence            876422   34689999999999998877665 7999999999999988874 487775

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.1e-47  Score=362.62  Aligned_cols=338  Identities=22%  Similarity=0.332  Sum_probs=269.7

Q ss_pred             ccchhhhcc--CCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 017336            3 STAAAVAWE--AGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         3 ~~~a~~~~~--~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      +.||+.+..  .++++++.+++.|.|+++||+|||.++|+|++|++.+.|.++...+|.++|||++|+|+++|+++++|+
T Consensus         4 ~~~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~   83 (375)
T PLN02178          4 QNKAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFK   83 (375)
T ss_pred             cceeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccC
Confidence            345544444  334588889999999999999999999999999999887654445789999999999999999999999


Q ss_pred             CCCEEeecCcC-CCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC
Q 017336           81 VGDHVLPVFTG-ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP  159 (373)
Q Consensus        81 ~Gd~V~~~~~~-~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~  159 (373)
                      +||||++.+.. +|+.|++|++|+++.|++..+.   +...       +..|     ....|+|+||+.++++.++++|+
T Consensus        84 vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~---~~~~-------~~~g-----~~~~G~~aey~~v~~~~~~~lP~  148 (375)
T PLN02178         84 EGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFT---YNSR-------SSDG-----TRNQGGYSDVIVVDHRFVLSIPD  148 (375)
T ss_pred             CCCEEEEcCccCCCCCChhHhCcchhcCCCcccc---cccc-------ccCC-----CcCCCccccEEEEchHHeEECCC
Confidence            99999876655 6999999999999999975432   0000       0000     01136999999999999999999


Q ss_pred             CCCchhhhhcccchhhhhhhhhhccC-CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChh-HHHHHHhcCCcee
Q 017336          160 LAPLDKVCILSCGVSTGLGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RFEEAKKFGVTDF  237 (373)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~-~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~-~~~~~~~lg~~~v  237 (373)
                      ++++++++++++...|+|+++..... .+++++|+|.|+|++|++++|+|+.+|+ +|++++.+++ +.+.++++|++++
T Consensus       149 ~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~  227 (375)
T PLN02178        149 GLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSF  227 (375)
T ss_pred             CCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEE
Confidence            99999999999999999988644332 3689999999999999999999999999 6888876644 4788889999998


Q ss_pred             ecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEec
Q 017336          238 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFF  316 (373)
Q Consensus       238 i~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~  316 (373)
                      +++.+.     +.+.+.++ ++|++|||+|.+..+..++++++++ |+++.+|.....  ..++... +.+++++.|+..
T Consensus       228 i~~~~~-----~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~~~--~~~~~~~~~~~~~~i~g~~~  298 (375)
T PLN02178        228 LVTTDS-----QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPEKP--LDLPIFPLVLGRKMVGGSQI  298 (375)
T ss_pred             EcCcCH-----HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCCCC--CccCHHHHHhCCeEEEEeCc
Confidence            876532     24445544 7999999999876889999999997 999999976433  2333333 348889998765


Q ss_pred             cCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          317 GNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       317 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      +.   .+++.++++++.+|++++.  + ++|||+++++|++.+.+++. +|+++++
T Consensus       299 ~~---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        299 GG---MKETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             cC---HHHHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence            43   2468899999999988654  4 67999999999999998875 6998876

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=3.8e-47  Score=353.64  Aligned_cols=320  Identities=22%  Similarity=0.301  Sum_probs=267.4

Q ss_pred             hhhccCCC----CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            7 AVAWEAGK----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         7 ~~~~~~~~----~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      +.+..++.    .++++++|.|.|+++||+|||.++|+|++|++.+.|.++...+|.++|||++|+|+++|++++.|++|
T Consensus         2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   81 (329)
T TIGR02822         2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVG   81 (329)
T ss_pred             eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCC
Confidence            44555553    38899999999999999999999999999999988866544457899999999999999999999999


Q ss_pred             CEEeecCc-CCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336           83 DHVLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  161 (373)
Q Consensus        83 d~V~~~~~-~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~  161 (373)
                      |+|++.+. .+|+.|++|.+|+++.|++..+.   |..                   ..|+|+||+.++++.++++|+++
T Consensus        82 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~lP~~~  139 (329)
T TIGR02822        82 DRVGIAWLRRTCGVCRYCRRGAENLCPASRYT---GWD-------------------TDGGYAEYTTVPAAFAYRLPTGY  139 (329)
T ss_pred             CEEEEcCccCcCCCChHHhCcCcccCCCcccC---Ccc-------------------cCCcceeEEEeccccEEECCCCC
Confidence            99987654 47999999999999999875432   321                   23699999999999999999999


Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  241 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~  241 (373)
                      ++++++.+++++.|||+++ ..+.++++++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|+++++++.
T Consensus       140 ~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~  217 (329)
T TIGR02822       140 DDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAY  217 (329)
T ss_pred             CHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecccc
Confidence            9999999999999999986 46889999999999999999999999999999 799999999999999999999988754


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCCC
Q 017336          242 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYK  320 (373)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~  320 (373)
                      +..           .+++|+++++.+....+..++++++++ |+++.+|...... ..+.... +.+++++.++....  
T Consensus       218 ~~~-----------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~~-~~~~~~~~~~~~~~i~g~~~~~--  282 (329)
T TIGR02822       218 DTP-----------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTDT-PPLNYQRHLFYERQIRSVTSNT--  282 (329)
T ss_pred             ccC-----------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCccC-CCCCHHHHhhCCcEEEEeecCC--
Confidence            321           126899999988878899999999997 9999999753221 1222222 34788888876432  


Q ss_pred             CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 017336          321 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII  369 (373)
Q Consensus       321 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~  369 (373)
                       ++++.++++++.++++.   +++++|+|+|+++|++.+.+++. +|++|
T Consensus       283 -~~~~~~~~~l~~~g~i~---~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       283 -RADAREFLELAAQHGVR---VTTHTYPLSEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             -HHHHHHHHHHHHhCCCe---eEEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence             34578899999999874   46899999999999999998875 48776

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=1.4e-46  Score=355.08  Aligned_cols=348  Identities=26%  Similarity=0.436  Sum_probs=289.5

Q ss_pred             chhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCC------
Q 017336            5 AAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD------   78 (373)
Q Consensus         5 ~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~------   78 (373)
                      ||+++.++++.+++++.+.|.|+++||+|||.++++|++|+....|..+...+|.++|||++|+|+++|++++.      
T Consensus         2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~   81 (361)
T cd08231           2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP   81 (361)
T ss_pred             eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence            78888988877999999999999999999999999999999988886653567889999999999999999986      


Q ss_pred             CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC-ceEeC
Q 017336           79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG-CVAKI  157 (373)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~-~~~~~  157 (373)
                      |++||+|++.+..+|+.|..|+.+..++|.+..+.   |.....+       +     ....|+|+||+.++++ .++++
T Consensus        82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~---~~~~~~~-------~-----~~~~g~~a~~~~v~~~~~~~~l  146 (361)
T cd08231          82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY---GHEASCD-------D-----PHLSGGYAEHIYLPPGTAIVRV  146 (361)
T ss_pred             cCCCCEEEEcccCCCCCChhHhCcCccccccchhc---ccccccc-------C-----CCCCcccceEEEecCCCceEEC
Confidence            99999999999999999999999999999876544   3221100       0     0113699999999996 79999


Q ss_pred             CCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee
Q 017336          158 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF  237 (373)
Q Consensus       158 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v  237 (373)
                      |++++..+++.++++++|||+++.+.....++++|||+|+|.+|++++|+|+.+|+++|+++++++++.++++++|++.+
T Consensus       147 P~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~v  226 (361)
T cd08231         147 PDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADAT  226 (361)
T ss_pred             CCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeE
Confidence            99999999999889999999998766666799999999999999999999999999778989899999999999999988


Q ss_pred             ecCCCCC-ccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEE
Q 017336          238 VNTSEHD-RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGT  314 (373)
Q Consensus       238 i~~~~~~-~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~  314 (373)
                      ++++..+ .++.+.+.+.+++ ++|++||++|+...+..++++++++ |+++.+|.........+.... +.+++++.++
T Consensus       227 i~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  305 (361)
T cd08231         227 IDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGV  305 (361)
T ss_pred             EcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEc
Confidence            8776543 1233567777776 8999999999867889999999997 999999976432233333322 3488888887


Q ss_pred             eccCCCCCCCHHHHHHHHHcC--CCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336          315 FFGNYKPRTDLPSVVDMYMNK--QLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  371 (373)
Q Consensus       315 ~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~  371 (373)
                      ....   .+++.++++++.++  .+.+.++++++|+++++++|++.+.++...|++|++
T Consensus       306 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~  361 (361)
T cd08231         306 HNYD---PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTALKVVIDP  361 (361)
T ss_pred             ccCC---chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence            6432   34688899999888  666777889999999999999999888777998863

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=1.6e-46  Score=353.20  Aligned_cols=335  Identities=31%  Similarity=0.506  Sum_probs=283.9

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-----------CCCCCccccccceEEEEEe
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-----------TPLFPRIFGHEAAGVVESV   72 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-----------~~~~p~i~G~e~~G~V~~v   72 (373)
                      |||+++.+++. +++++++.|+|+++||+||+.++++|++|++.+.+...           ...+|.++|||++|+|+++
T Consensus         1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   79 (351)
T cd08233           1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV   79 (351)
T ss_pred             CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence            68999988765 99999999999999999999999999999876553211           1236889999999999999


Q ss_pred             CCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC
Q 017336           73 GEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG  152 (373)
Q Consensus        73 G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~  152 (373)
                      |++++.|++||+|++.+..+|++|.+|+++.++.|....+.   |..                  ...|+|++|+.++++
T Consensus        80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------------------~~~g~~a~~~~~~~~  138 (351)
T cd08233          80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFI---GLG------------------GGGGGFAEYVVVPAY  138 (351)
T ss_pred             CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCcee---ccC------------------CCCCceeeEEEechH
Confidence            99999999999999999999999999999999999754322   110                  013699999999999


Q ss_pred             ceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc
Q 017336          153 CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF  232 (373)
Q Consensus       153 ~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l  232 (373)
                      .++++|+++++++++.+ .++.|||+++ ..++++++++|||+|+|.+|++++|+|+.+|+++|+++++++++.+.++++
T Consensus       139 ~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~  216 (351)
T cd08233         139 HVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEEL  216 (351)
T ss_pred             HeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence            99999999999988766 5788999986 778899999999999999999999999999997789998999999999999


Q ss_pred             CCceeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccce
Q 017336          233 GVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERT  310 (373)
Q Consensus       233 g~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~  310 (373)
                      |++.++++.+.+  +.+.+++.+++ ++|++||++|++..+..++++++++ |+++.+|.....  ..+.... +.++++
T Consensus       217 ga~~~i~~~~~~--~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~  291 (351)
T cd08233         217 GATIVLDPTEVD--VVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWEKP--ISFNPNDLVLKEKT  291 (351)
T ss_pred             CCCEEECCCccC--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCCCC--CccCHHHHHhhCcE
Confidence            999999887665  88888888876 7999999999777889999999997 999999986532  2333332 348889


Q ss_pred             EEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccH-HHHHHHHHcCCc--eeEEEe
Q 017336          311 LKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI-NKAFEYMVKGEG--LRCIIS  370 (373)
Q Consensus       311 i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~-~~a~~~l~~~~~--~k~v~~  370 (373)
                      +.++..+.   .++++++++++.++++++.++++++|+++|+ ++|++.+.+++.  +|++|.
T Consensus       292 i~g~~~~~---~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~  351 (351)
T cd08233         292 LTGSICYT---REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS  351 (351)
T ss_pred             EEEEeccC---cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence            98876432   3579999999999999877778999999997 789999988874  688873

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1.3e-47  Score=322.05  Aligned_cols=313  Identities=26%  Similarity=0.294  Sum_probs=270.5

Q ss_pred             ccchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 017336            3 STAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         3 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      +.|.+++++.|++  +++++.|.|+|+|+|++||-.|+|+|..|.+.++|.+...+.|++||-|.+|+|+++|++|++++
T Consensus         8 ~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gvtdrk   87 (336)
T KOG1197|consen    8 LLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGVTDRK   87 (336)
T ss_pred             hheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCccccc
Confidence            4678888998886  88999999999999999999999999999999999998888999999999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||||+...                                                 ..|.|+|+..+|...++++|+.
T Consensus        88 vGDrVayl~-------------------------------------------------~~g~yaee~~vP~~kv~~vpe~  118 (336)
T KOG1197|consen   88 VGDRVAYLN-------------------------------------------------PFGAYAEEVTVPSVKVFKVPEA  118 (336)
T ss_pred             cccEEEEec-------------------------------------------------cchhhheeccccceeeccCCcc
Confidence            999998541                                                 1269999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      +++.+||++...++|||..+.+...+++|++||++.+ |++|+++.||++..|+ .+|++.++++|++.+++.|+++.|+
T Consensus       119 i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~  197 (336)
T KOG1197|consen  119 ITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPID  197 (336)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcceee
Confidence            9999999999999999998888889999999999965 9999999999999999 7888889999999999999999999


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc-ccceEEEEecc
Q 017336          240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFG  317 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~  317 (373)
                      ++.+|  +.+.+++++++ |+|+++|.+|. +.+...+.+|++. |.++.+|..++... .++...+. +.+++...++.
T Consensus       198 y~~eD--~v~~V~kiTngKGVd~vyDsvG~-dt~~~sl~~Lk~~-G~mVSfG~asgl~~-p~~l~~ls~k~l~lvrpsl~  272 (336)
T KOG1197|consen  198 YSTED--YVDEVKKITNGKGVDAVYDSVGK-DTFAKSLAALKPM-GKMVSFGNASGLID-PIPLNQLSPKALQLVRPSLL  272 (336)
T ss_pred             ccchh--HHHHHHhccCCCCceeeeccccc-hhhHHHHHHhccC-ceEEEeccccCCCC-CeehhhcChhhhhhccHhhh
Confidence            99887  99999999988 99999999999 8999999999997 99999998764221 11122222 55555433332


Q ss_pred             CCCC-CCC----HHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336          318 NYKP-RTD----LPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       318 ~~~~-~~~----~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                      .|.+ ..+    ..+++.++.++.+.++  +.++|||+++.+|++++++.+. +|+++...
T Consensus       273 gYi~g~~el~~~v~rl~alvnsg~lk~~--I~~~ypls~vadA~~diesrktvGkvlLlp~  331 (336)
T KOG1197|consen  273 GYIDGEVELVSYVARLFALVNSGHLKIH--IDHVYPLSKVADAHADIESRKTVGKVLLLPG  331 (336)
T ss_pred             cccCCHHHHHHHHHHHHHHhhcCcccee--eeeecchHHHHHHHHHHHhhhccceEEEeCC
Confidence            2322 222    3578888899988776  8999999999999999998885 58888763

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=1.6e-45  Score=347.98  Aligned_cols=362  Identities=36%  Similarity=0.636  Sum_probs=290.8

Q ss_pred             cccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 017336            2 SSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   81 (373)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   81 (373)
                      ++|||+++.+++.++++++.+.|.++++||+|||.++++|++|+....+.++ ..+|.++|+|++|+|+++|+++..+++
T Consensus         1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~   79 (365)
T cd08278           1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP   79 (365)
T ss_pred             CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence            4899999998777799999999999999999999999999999999887654 346889999999999999999999999


Q ss_pred             CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCcc--ccccCCcceeeEEEEecCceEeCCC
Q 017336           82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPV--NHFLGTSTFSEYTVVHSGCVAKINP  159 (373)
Q Consensus        82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~--~~~~~~G~~a~~~~v~~~~~~~~p~  159 (373)
                      ||+|++.+. +|+.|.+|+.++.+.|.+.......|.. ++|...+...++..  ......|+|++|+.+++++++++|+
T Consensus        80 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~  157 (365)
T cd08278          80 GDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRR-PDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDK  157 (365)
T ss_pred             CCEEEEccc-CCCCChHHhCCCcccccCcccccccccc-cCCcccccccCCcccccccccccceeeEEEecchhEEECCC
Confidence            999998764 8999999999999999864422211211 11100000000000  0011247999999999999999999


Q ss_pred             CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      ++++++++.+++++.||+.++.....++++++|||+|+|.+|++++|+|+.+|++.|++++++++|.+.++++|++.+++
T Consensus       158 ~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~  237 (365)
T cd08278         158 DVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVIN  237 (365)
T ss_pred             CCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEec
Confidence            99999999999999999998888888999999999988999999999999999977999999999999999999998888


Q ss_pred             CCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEeccC
Q 017336          240 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGN  318 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~  318 (373)
                      +...+  +.+.+.+.+++++|+++||+|++..+..++++++++ |+++.+|..........+...+ .++.++.++....
T Consensus       238 ~~~~~--~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (365)
T cd08278         238 PKEED--LVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGD  314 (365)
T ss_pred             CCCcC--HHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCC
Confidence            76654  777777777448999999999778889999999997 9999999763222233344444 4788888776543


Q ss_pred             CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEe
Q 017336          319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS  370 (373)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~  370 (373)
                      ....+.+.++++++.++.+.+.+ +...|+++++++|++.+.+++..|++++
T Consensus       315 ~~~~~~~~~~~~~l~~g~l~~~~-~~~~~~l~~~~~a~~~~~~~~~~k~~~~  365 (365)
T cd08278         315 SVPQEFIPRLIELYRQGKFPFDK-LVTFYPFEDINQAIADSESGKVIKPVLR  365 (365)
T ss_pred             cChHHHHHHHHHHHHcCCCChHH-heEEecHHHHHHHHHHHHCCCceEEEEC
Confidence            33345678899999999885433 3458999999999999998887788874

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=7.5e-46  Score=348.91  Aligned_cols=338  Identities=22%  Similarity=0.340  Sum_probs=274.7

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   83 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   83 (373)
                      ++|++++.+++++++++++.|+|+++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|++++.|++||
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~Gd   89 (357)
T PLN02514         10 TTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGD   89 (357)
T ss_pred             EEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccCCC
Confidence            78899999999999999999999999999999999999999998887655445789999999999999999999999999


Q ss_pred             EEeecCcC-CCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336           84 HVLPVFTG-ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  162 (373)
Q Consensus        84 ~V~~~~~~-~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~  162 (373)
                      +|++.+.. .|+.|.+|++|.++.|++..+....++          ..|     ....|+|+||+.++++.++++|++++
T Consensus        90 ~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~----------~~g-----~~~~G~~aey~~v~~~~~~~iP~~~~  154 (357)
T PLN02514         90 IVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY----------TDG-----KPTQGGFASAMVVDQKFVVKIPEGMA  154 (357)
T ss_pred             EEEEcCccccCCCChhHhCCCcccCCCccccccccc----------cCC-----ccCCCccccEEEEchHHeEECCCCCC
Confidence            99865544 699999999999999987532100000          000     01236999999999999999999999


Q ss_pred             chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHH-HHhcCCceeecCC
Q 017336          163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTDFVNTS  241 (373)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~-~~~lg~~~vi~~~  241 (373)
                      +++++.+++++.|||+++......+++++|+|+|+|++|++++|+|+.+|+ +|+++++++++++. ++++|++.++++.
T Consensus       155 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~~  233 (357)
T PLN02514        155 PEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVSS  233 (357)
T ss_pred             HHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecCC
Confidence            999999999999999987666667899999999999999999999999999 67777777766654 4679998877654


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCCC
Q 017336          242 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYK  320 (373)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~  320 (373)
                      +.     +.+.+.+. ++|++||++|....+..++++++++ |+++.+|.....  ..+.... +.+++++.|+..+.  
T Consensus       234 ~~-----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~g~~~~~--  302 (357)
T PLN02514        234 DA-----AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINTP--LQFVTPMLMLGRKVITGSFIGS--  302 (357)
T ss_pred             Ch-----HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCCC--CcccHHHHhhCCcEEEEEecCC--
Confidence            32     23444443 7999999999867889999999997 999999986533  2333333 34888999987543  


Q ss_pred             CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336          321 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       321 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                       .+++.++++++.++++.  +++ ++|+|+++.+|++.+.+++. +|+++.++
T Consensus       303 -~~~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~  351 (357)
T PLN02514        303 -MKETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVA  351 (357)
T ss_pred             -HHHHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHHHcCCCceeEEEEcc
Confidence             23688999999999764  344 68999999999999998886 59998875

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=2.6e-44  Score=339.55  Aligned_cols=360  Identities=42%  Similarity=0.720  Sum_probs=292.7

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   83 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   83 (373)
                      |||+++..++.++++.+++.|.++++||+|++.++++|+.|+..+.|..+ ..+|.++|+|++|+|+++|++++.|++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd   79 (363)
T cd08279           1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD   79 (363)
T ss_pred             CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence            69999999888899999999999999999999999999999998877554 45678999999999999999999999999


Q ss_pred             EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336           84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  163 (373)
Q Consensus        84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~  163 (373)
                      +|++.+..+|++|.+|++++.++|.+..+... |. .+++..+....|.......+.|+|++|+.++++.++++|+++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~  157 (363)
T cd08279          80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGILG-GQ-LPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPL  157 (363)
T ss_pred             EEEECCCCCCCCChhhcCCCcccCcccccccc-cc-cCCCcccccccCccccccccCccceeeEEeccccEEECCCCCCh
Confidence            99999999999999999999999986532110 00 01111111111211111223479999999999999999999999


Q ss_pred             hhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCC
Q 017336          164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH  243 (373)
Q Consensus       164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~  243 (373)
                      ++++.+++++.+||.++.....+.++++|||+|+|.+|++++++|+.+|+.+|+++++++++.+.++++|++++++....
T Consensus       158 ~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~~  237 (363)
T cd08279         158 DRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASED  237 (363)
T ss_pred             HHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCCc
Confidence            99999999999999988888899999999999889999999999999999559999899999999999999888877665


Q ss_pred             CccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc-ccceEEEEeccCCCC
Q 017336          244 DRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKP  321 (373)
Q Consensus       244 ~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~  321 (373)
                      +  +.+.+.+.+.+ ++|+++|++++...+..++++++++ |+++.+|.........+....+. ++..+.++.+.....
T Consensus       238 ~--~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (363)
T cd08279         238 D--AVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANP  314 (363)
T ss_pred             c--HHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCc
Confidence            4  77778777755 8999999999767889999999997 99999987543223333433333 666767765544344


Q ss_pred             CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEE
Q 017336          322 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII  369 (373)
Q Consensus       322 ~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~  369 (373)
                      .+.+++++++++++.+.+.+++.+.|+++++++|++.+.+++..|.|+
T Consensus       315 ~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         315 RRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             HHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence            557889999999998876656788999999999999999888776665

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=2.3e-44  Score=338.61  Aligned_cols=342  Identities=25%  Similarity=0.335  Sum_probs=282.6

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   83 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   83 (373)
                      |||+++.+++. +++.+.+.|.++++||+|||.++++|++|++.+.+.++...+|.++|||++|+|+++|++++.+++||
T Consensus         1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd   79 (351)
T cd08285           1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD   79 (351)
T ss_pred             CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence            78999988876 89999999999999999999999999999988877655556789999999999999999999999999


Q ss_pred             EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC--ceEeCCCCC
Q 017336           84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLA  161 (373)
Q Consensus        84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p~~~  161 (373)
                      +|++.+..+|++|..|..|+++.|.+...    |....               ....|+|+||+.++.+  .++++|+++
T Consensus        80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~----~~~~~---------------~~~~g~~~~y~~v~~~~~~~~~lP~~~  140 (351)
T cd08285          80 RVIVPAITPDWRSVAAQRGYPSQSGGMLG----GWKFS---------------NFKDGVFAEYFHVNDADANLAPLPDGL  140 (351)
T ss_pred             EEEEcCcCCCCCCHHHHCcCcccCcCCCC----Ccccc---------------CCCCcceeEEEEcchhhCceEECCCCC
Confidence            99998888999999999999999975321    11000               0123699999999974  899999999


Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  241 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~  241 (373)
                      ++++++.++..+.|||++ ...+.++++++|||+|+|.+|++++|+|+.+|+..|+++++++++.+.++++|++.++++.
T Consensus       141 ~~~~aa~~~~~~~ta~~~-~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~  219 (351)
T cd08285         141 TDEQAVMLPDMMSTGFHG-AELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK  219 (351)
T ss_pred             CHHHhhhhccchhhHHHH-HHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCC
Confidence            999999998899999998 4678899999999998899999999999999997799999999999999999999998876


Q ss_pred             CCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh---cccceEEEEecc
Q 017336          242 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV---LNERTLKGTFFG  317 (373)
Q Consensus       242 ~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~---~~~~~i~g~~~~  317 (373)
                      +.+  +.+.+...+.+ ++|+++|++|++..+..++++++++ |+++.+|.........+....+   .+..++.+... 
T Consensus       220 ~~~--~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-  295 (351)
T cd08285         220 NGD--VVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLC-  295 (351)
T ss_pred             CCC--HHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeec-
Confidence            654  77777777766 8999999999877889999999997 9999998765332233322111   24555655432 


Q ss_pred             CCCCCCCHHHHHHHHHcCCCCCCCc-eeeeeccccHHHHHHHHHcCCc--eeEEEec
Q 017336          318 NYKPRTDLPSVVDMYMNKQLELEKF-ITHRIPFSEINKAFEYMVKGEG--LRCIISM  371 (373)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~~l~~~~~a~~~l~~~~~--~k~v~~~  371 (373)
                       ....+.++++++++.++++.+..+ ..+.|+++++++|++.+.+++.  .|++|++
T Consensus       296 -~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         296 -PGGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             -CCccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence             112357899999999999887433 4456999999999999988873  6998864

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=4.1e-45  Score=341.78  Aligned_cols=321  Identities=18%  Similarity=0.209  Sum_probs=250.2

Q ss_pred             ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC----CCCCccccccceEEEEEeCCCCCC
Q 017336            3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT----PLFPRIFGHEAAGVVESVGEGVSD   78 (373)
Q Consensus         3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~----~~~p~i~G~e~~G~V~~vG~~v~~   78 (373)
                      ..+|+++..+++ +++++++.|. +++||+|||.++|||++|++.+.|.+..    ..+|.++|||++|+|+++|.+  .
T Consensus         2 ~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~   77 (341)
T cd08237           2 INQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T   77 (341)
T ss_pred             cccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence            567888888876 9999999995 9999999999999999999999886532    357999999999999998864  7


Q ss_pred             CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336           79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  158 (373)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p  158 (373)
                      |++||||++.+..+|+ |..|  +..|.|.+..+.   |..                   ..|+|+||+.+|+++++++|
T Consensus        78 ~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~vP  132 (341)
T cd08237          78 YKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRFR---SSG-------------------YDGFMQDYVFLPPDRLVKLP  132 (341)
T ss_pred             cCCCCEEEECCCCCch-hccc--chhccCCCccee---Eec-------------------CCCceEEEEEEchHHeEECC
Confidence            9999999998888877 4355  456778754332   211                   13699999999999999999


Q ss_pred             CCCCchhhhhcccchhhhhhhhhh--ccCCCCCCEEEEECCCHHHHHHHHHHHH-cCCcEEEEEcCChhHHHHHHhcCCc
Q 017336          159 PLAPLDKVCILSCGVSTGLGATLN--VAKPERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFGVT  235 (373)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~~~~vlI~G~g~~G~~ai~la~~-~g~~~V~~~~~~~~~~~~~~~lg~~  235 (373)
                      +++++++|+.+ .+++++|+++..  .+.++++++|||+|+|++|++++|+|++ +|..+|++++++++|++++++++.+
T Consensus       133 ~~l~~~~aa~~-~~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~  211 (341)
T cd08237         133 DNVDPEVAAFT-ELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADET  211 (341)
T ss_pred             CCCChHHhhhh-chHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCce
Confidence            99999887755 478889988653  2456889999999999999999999986 6655899999999999999887665


Q ss_pred             eeecCCCCCccHHHHHHHHcCC-CccEEEEccCC---hHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccce
Q 017336          236 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERT  310 (373)
Q Consensus       236 ~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~---~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~  310 (373)
                      ..++  +    +       ... ++|+|||++|+   +..+..++++++++ |+++++|.....  ..+.... +.++++
T Consensus       212 ~~~~--~----~-------~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~k~~~  275 (341)
T cd08237         212 YLID--D----I-------PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSEYP--VPINTRMVLEKGLT  275 (341)
T ss_pred             eehh--h----h-------hhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecCCC--cccCHHHHhhCceE
Confidence            3321  0    1       112 69999999994   46789999999997 999999975432  2333333 348999


Q ss_pred             EEEEeccCCCCCCCHHHHHHHHHcC---CCCCCCceeeeeccc---cHHHHHHHHHcCCceeEEEecC
Q 017336          311 LKGTFFGNYKPRTDLPSVVDMYMNK---QLELEKFITHRIPFS---EINKAFEYMVKGEGLRCIISME  372 (373)
Q Consensus       311 i~g~~~~~~~~~~~~~~~~~~l~~~---~l~~~~~~~~~~~l~---~~~~a~~~l~~~~~~k~v~~~~  372 (373)
                      +.|+..+.   .+++.++++++.++   +..+.++++++|+|+   ++.+|++.+.++..+|++|+++
T Consensus       276 i~g~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~~  340 (341)
T cd08237         276 LVGSSRST---REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEWE  340 (341)
T ss_pred             EEEecccC---HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEee
Confidence            99886432   24688999999998   345777899999986   5566665555544569999864

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=8.4e-44  Score=333.26  Aligned_cols=335  Identities=23%  Similarity=0.366  Sum_probs=276.7

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   83 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   83 (373)
                      |||+++.+++. +++++++.|.|+++|++||+.++++|++|+..+.|..+..++|.++|||++|+|+++|++++.+++||
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   79 (339)
T PRK10083          1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE   79 (339)
T ss_pred             CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence            68898888765 99999999999999999999999999999998887665556789999999999999999999999999


Q ss_pred             EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336           84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  163 (373)
Q Consensus        84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~  163 (373)
                      +|++.+..+|+.|.+|++++++.|.+....   ++                   ...|+|+||+.++.+.++++|+++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~~~~~~~~~ip~~~~~  137 (339)
T PRK10083         80 RVAVDPVISCGHCYPCSIGKPNVCTSLVVL---GV-------------------HRDGGFSEYAVVPAKNAHRIPDAIAD  137 (339)
T ss_pred             EEEEccccCCCCCccccCcCcccCCCCceE---EE-------------------ccCCcceeeEEechHHeEECcCCCCH
Confidence            999999999999999999999999754321   11                   11369999999999999999999998


Q ss_pred             hhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHH-cCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336          164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  242 (373)
Q Consensus       164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~-~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~  242 (373)
                      +.++ +...+.++|. +....+++++++|||+|+|.+|++++|+|+. +|+..++++++++++.+.++++|++.++++.+
T Consensus       138 ~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~  215 (339)
T PRK10083        138 QYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ  215 (339)
T ss_pred             HHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc
Confidence            8876 4567788885 4677889999999999999999999999996 69977888999999999999999999988765


Q ss_pred             CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEeccCCCC
Q 017336          243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKP  321 (373)
Q Consensus       243 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~  321 (373)
                      .+  +.+.+... +.++|++||++|++..+..++++++++ |+++.+|......  ......+ .+++++.++..    .
T Consensus       216 ~~--~~~~~~~~-g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~----~  285 (339)
T PRK10083        216 EP--LGEALEEK-GIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSEPS--EIVQQGITGKELSIFSSRL----N  285 (339)
T ss_pred             cc--HHHHHhcC-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCc--eecHHHHhhcceEEEEEec----C
Confidence            43  55555332 115689999999767899999999997 9999999764322  2222222 36677776543    2


Q ss_pred             CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC--ceeEEEecCC
Q 017336          322 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE--GLRCIISMED  373 (373)
Q Consensus       322 ~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~--~~k~v~~~~~  373 (373)
                      .+.++++++++.++++.+.+++++.|+++++++|++.+.++.  ..|+++++.|
T Consensus       286 ~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~  339 (339)
T PRK10083        286 ANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE  339 (339)
T ss_pred             hhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence            356889999999998877656789999999999999988653  3699998764

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=1.8e-43  Score=332.11  Aligned_cols=340  Identities=31%  Similarity=0.432  Sum_probs=284.4

Q ss_pred             cchhhhccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      |||+++..++. +++.+.+.|.| +++||+||+.++++|++|+..+.+.++..++|.++|+|++|+|+++|++++.+++|
T Consensus         1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G   79 (347)
T cd05278           1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG   79 (347)
T ss_pred             CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence            58899888776 89999999999 99999999999999999999888877666778999999999999999999999999


Q ss_pred             CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC--ceEeCCCC
Q 017336           83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL  160 (373)
Q Consensus        83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p~~  160 (373)
                      |+|++.+.++|+.|.+|..|.+++|++..+..+.|.                   ...|+|++|++++++  +++++|++
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~g~~~~~~~v~~~~~~~~~lP~~  140 (347)
T cd05278          80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGN-------------------RIDGGQAEYVRVPYADMNLAKIPDG  140 (347)
T ss_pred             CEEEecCCCCCCCChhHhCcCcccCcCCCccccccc-------------------CCCCeeeEEEEecchhCeEEECCCC
Confidence            999999999999999999999999987543321111                   124699999999987  99999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      +++++++.++++++|||+++ ...+++++++|||.|+|.+|++++|+|+.+|..+|+++++++++.+.++++|++.++++
T Consensus       141 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~  219 (347)
T cd05278         141 LPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINP  219 (347)
T ss_pred             CCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcC
Confidence            99999999999999999986 67889999999998889999999999999996578888888999999999999888887


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCC
Q 017336          241 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY  319 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  319 (373)
                      +..+  +.+.++..+++ ++|++||++++...+..++++|+++ |+++.+|..............+.++.++.++.... 
T Consensus       220 ~~~~--~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  295 (347)
T cd05278         220 KNGD--IVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV-  295 (347)
T ss_pred             Ccch--HHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccCc-
Confidence            7654  77778877775 8999999999867889999999997 99999986543221112222234677777654322 


Q ss_pred             CCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc--eeEEEe
Q 017336          320 KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG--LRCIIS  370 (373)
Q Consensus       320 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~--~k~v~~  370 (373)
                        .+.+.++++++.++.+.+.+++...|+++++++|++.+..++.  .|++++
T Consensus       296 --~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~  346 (347)
T cd05278         296 --RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR  346 (347)
T ss_pred             --hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence              3568889999999988765556788999999999999887765  487775

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.8e-43  Score=330.10  Aligned_cols=330  Identities=25%  Similarity=0.462  Sum_probs=278.1

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   83 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   83 (373)
                      |||+++..++.++++++.+.|.++++||+||+.++++|++|+..+.|..+...+|.++|||++|+|+++|++++.+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd   80 (333)
T cd08296           1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD   80 (333)
T ss_pred             CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence            79999998866799999999999999999999999999999998887655456688999999999999999999999999


Q ss_pred             EEeecC-cCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336           84 HVLPVF-TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  162 (373)
Q Consensus        84 ~V~~~~-~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~  162 (373)
                      +|++.+ ...|+.|.+|..|+++.|.+.+..   |.                   ...|+|++|+.++++.++++|++++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~---~~-------------------~~~g~~a~~~~v~~~~~~~lp~~~~  138 (333)
T cd08296          81 RVGVGWHGGHCGTCDACRRGDFVHCENGKVT---GV-------------------TRDGGYAEYMLAPAEALARIPDDLD  138 (333)
T ss_pred             EEEeccccCCCCCChhhhCcCcccCCCCCcc---Cc-------------------ccCCcceeEEEEchhheEeCCCCCC
Confidence            998754 567999999999999999876543   21                   1136999999999999999999999


Q ss_pred             chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336          163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  242 (373)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~  242 (373)
                      +.+++.+++.+.|||+++.. ..+.++++|||+|+|.+|++++++|+++|+ +|+++++++++++.++++|+++++++.+
T Consensus       139 ~~~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~  216 (333)
T cd08296         139 AAEAAPLLCAGVTTFNALRN-SGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK  216 (333)
T ss_pred             HHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC
Confidence            99999999999999998754 589999999999999999999999999999 7999999999999999999998888766


Q ss_pred             CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCCCC
Q 017336          243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKP  321 (373)
Q Consensus       243 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~  321 (373)
                      .+  +.+.+++.  +++|+++|++|....+..++++++++ |+++.+|....  ...+.... +.+++++.++..+.   
T Consensus       217 ~~--~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~---  286 (333)
T cd08296         217 ED--VAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAGE--PVAVSPLQLIMGRKSIHGWPSGT---  286 (333)
T ss_pred             cc--HHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCCC--CCCcCHHHHhhcccEEEEeCcCC---
Confidence            54  66666655  37999999998668899999999997 99999998652  23333332 34899999876432   


Q ss_pred             CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336          322 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  370 (373)
Q Consensus       322 ~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~  370 (373)
                      ..++..+++++.++.+..  ++ ..|+++++.+|++.+.+++. +|+|++
T Consensus       287 ~~~~~~~~~~~~~~~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         287 ALDSEDTLKFSALHGVRP--MV-ETFPLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             HHHHHHHHHHHHhCCCCc--eE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence            235788888888886643  34 68999999999999998886 588774

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=2e-43  Score=338.13  Aligned_cols=331  Identities=19%  Similarity=0.221  Sum_probs=260.9

Q ss_pred             cccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccc-ccCCC-C-----CCCCccccccceEEEEEeCC
Q 017336            2 SSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFW-ESKGQ-T-----PLFPRIFGHEAAGVVESVGE   74 (373)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~-~g~~~-~-----~~~p~i~G~e~~G~V~~vG~   74 (373)
                      |.|||+++..++. ++++++|.|.|+++||+|||.++|+|++|++.+ .|... .     ..+|.++|||++|+|+++|+
T Consensus         1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~   79 (410)
T cd08238           1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK   79 (410)
T ss_pred             CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence            3789999988876 999999999999999999999999999999875 44321 1     24688999999999999999


Q ss_pred             CCC-CCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC-
Q 017336           75 GVS-DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG-  152 (373)
Q Consensus        75 ~v~-~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~-  152 (373)
                      +++ .|++||||++.+...|+.|..|. +   .          |+.                   ..|+|+||+.++++ 
T Consensus        80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~-~---~----------g~~-------------------~~G~~aey~~v~~~~  126 (410)
T cd08238          80 KWQGKYKPGQRFVIQPALILPDGPSCP-G---Y----------SYT-------------------YPGGLATYHIIPNEV  126 (410)
T ss_pred             CccCCCCCCCEEEEcCCcCCCCCCCCC-C---c----------ccc-------------------CCCcceEEEEecHHh
Confidence            998 59999999999888898888772 1   0          111                   13699999999987 


Q ss_pred             ---ceEeCCCCCCchhhhhc-c--cc--hhhhhhh-----hhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcC--CcEE
Q 017336          153 ---CVAKINPLAPLDKVCIL-S--CG--VSTGLGA-----TLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAG--ASRI  216 (373)
Q Consensus       153 ---~~~~~p~~~~~~~aa~~-~--~~--~~ta~~~-----l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g--~~~V  216 (373)
                         .++++|+++++++++.+ +  +.  ..+|++.     +.++++++++++|+|+|+ |++|++++|+|+.+|  +.+|
T Consensus       127 ~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~V  206 (410)
T cd08238         127 MEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLL  206 (410)
T ss_pred             ccCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceE
Confidence               68999999999988754 2  22  1222222     124578899999999985 999999999999975  4579


Q ss_pred             EEEcCChhHHHHHHhc--------CCc-eeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEE
Q 017336          217 IGVDRSSKRFEEAKKF--------GVT-DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVA  286 (373)
Q Consensus       217 ~~~~~~~~~~~~~~~l--------g~~-~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~  286 (373)
                      ++++++++|++.++++        |++ .++++.+. .++.+.+++.+++ ++|++||++|++..+..++++++++ |++
T Consensus       207 i~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~-~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~  284 (410)
T cd08238         207 VVTDVNDERLARAQRLFPPEAASRGIELLYVNPATI-DDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCL  284 (410)
T ss_pred             EEEcCCHHHHHHHHHhccccccccCceEEEECCCcc-ccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeE
Confidence            9999999999999997        666 46665431 1277788888877 8999999999888999999999997 877


Q ss_pred             EEEcCC-CCCceeeccchhh-cccceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc
Q 017336          287 VLVGVP-SKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG  364 (373)
Q Consensus       287 v~~g~~-~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~  364 (373)
                      +.++.. .......++...+ .+++++.|+..+.   .++++++++++.++++++.++++++|+|+++++|++.+..+..
T Consensus       285 v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~  361 (410)
T cd08238         285 NFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLPGIPG  361 (410)
T ss_pred             EEEEccCCCCccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhhccCC
Confidence            766432 2121223333333 4889999976432   3468999999999999988889999999999999999994445


Q ss_pred             eeEEEec
Q 017336          365 LRCIISM  371 (373)
Q Consensus       365 ~k~v~~~  371 (373)
                      +|+++.+
T Consensus       362 gKvvl~~  368 (410)
T cd08238         362 GKKLIYT  368 (410)
T ss_pred             ceEEEEC
Confidence            6998876

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=1.3e-43  Score=327.12  Aligned_cols=303  Identities=20%  Similarity=0.286  Sum_probs=238.7

Q ss_pred             ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecC-cccccccccCCCC---CCCCccccccceEEEEEeCCCCCC
Q 017336            3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLC-RTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGEGVSD   78 (373)
Q Consensus         3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~-~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~   78 (373)
                      +|||+++..++. +++++.+.|+|+++||+|||.+++|| ++|++.++|.++.   ..+|.++|||++|+|+++|+++ .
T Consensus         1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~   78 (308)
T TIGR01202         1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G   78 (308)
T ss_pred             CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence            478999887665 99999999999999999999999996 6999888886543   3579999999999999999998 5


Q ss_pred             CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336           79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  158 (373)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p  158 (373)
                      |++||||++.    |..|..|..               |                     ..|+|+||+.++++.++++|
T Consensus        79 ~~vGdrV~~~----~~~c~~~~~---------------~---------------------~~G~~aey~~v~~~~~~~ip  118 (308)
T TIGR01202        79 FRPGDRVFVP----GSNCYEDVR---------------G---------------------LFGGASKRLVTPASRVCRLD  118 (308)
T ss_pred             CCCCCEEEEe----Ccccccccc---------------c---------------------cCCcccceEEcCHHHceeCC
Confidence            9999999873    222322210               1                     02699999999999999999


Q ss_pred             CCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee
Q 017336          159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  238 (373)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi  238 (373)
                      ++++++. +.+. .+.|||+++.. . ..+++++||+|+|++|++++|+|+.+|++.|++++.+++|++.+.++   .++
T Consensus       119 ~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i  191 (308)
T TIGR01202       119 PALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVL  191 (308)
T ss_pred             CCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---ccc
Confidence            9998764 4444 57899998644 3 34688999999999999999999999996677788788887766554   344


Q ss_pred             cCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccC
Q 017336          239 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN  318 (373)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~  318 (373)
                      ++.+.           .+.++|+||||+|++..++.++++++++ |+++++|.......+++.. .+.+++++.++..+.
T Consensus       192 ~~~~~-----------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~-~~~~~~~i~~~~~~~  258 (308)
T TIGR01202       192 DPEKD-----------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTEPVNFDFVP-AFMKEARLRIAAEWQ  258 (308)
T ss_pred             Chhhc-----------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCCCcccccch-hhhcceEEEEecccc
Confidence            43221           1237999999999977889999999997 9999999864332233222 234788888765432


Q ss_pred             CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC-ceeEEEe
Q 017336          319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-GLRCIIS  370 (373)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~-~~k~v~~  370 (373)
                         .+++++++++++++++++.+++++.|||+++++|++.+.++. ..|++|+
T Consensus       259 ---~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       259 ---PGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             ---hhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence               356999999999999998888999999999999999887655 4688874

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.1e-42  Score=327.14  Aligned_cols=336  Identities=25%  Similarity=0.394  Sum_probs=278.0

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC---------CCCCccccccceEEEEEeCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT---------PLFPRIFGHEAAGVVESVGE   74 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~---------~~~p~i~G~e~~G~V~~vG~   74 (373)
                      |||+++.+++. +++++.+.|+++++||+||+.++++|++|+....|....         ..+|.++|||++|+|+++|+
T Consensus         1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~   79 (350)
T cd08256           1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE   79 (350)
T ss_pred             CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence            68999987765 999999999999999999999999999999888775311         24677899999999999999


Q ss_pred             CCC--CCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC
Q 017336           75 GVS--DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG  152 (373)
Q Consensus        75 ~v~--~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~  152 (373)
                      +++  +|++||+|+..+..+|+.|..|..+..+.|....   ..|...                 ...|+|++|+.++++
T Consensus        80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~-----------------~~~g~~~~~~~~~~~  139 (350)
T cd08256          80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHD---LYGFQN-----------------NVNGGMAEYMRFPKE  139 (350)
T ss_pred             CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCcc---ceeecc-----------------CCCCcceeeEEcccc
Confidence            999  8999999999999999999999999999997432   122210                 013699999999988


Q ss_pred             -ceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh
Q 017336          153 -CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  231 (373)
Q Consensus       153 -~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~  231 (373)
                       .++++|++++++.++.+ .+++|+|+++ +.+++.++++|||.|+|.+|++++++|+.+|+..++++++++++.+.+++
T Consensus       140 ~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~  217 (350)
T cd08256         140 AIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARK  217 (350)
T ss_pred             cceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHH
Confidence             67899999999998888 7899999986 77899999999997789999999999999998778889899999999999


Q ss_pred             cCCceeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccce
Q 017336          232 FGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERT  310 (373)
Q Consensus       232 lg~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~  310 (373)
                      +|++.+++..+.+  +.+.+.+.+++ ++|++||++|+...+..++++++++ |+++.+|.......+........++++
T Consensus       218 ~g~~~v~~~~~~~--~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~  294 (350)
T cd08256         218 FGADVVLNPPEVD--VVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDPVTVDWSIIGDRKELD  294 (350)
T ss_pred             cCCcEEecCCCcC--HHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCCCccChhHhhcccccE
Confidence            9998888776554  77778887776 8999999999767788999999997 999999865433222222221246777


Q ss_pred             EEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 017336          311 LKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII  369 (373)
Q Consensus       311 i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~  369 (373)
                      +.++....    ..+.+++++++++.+.+.+++.+.|+++++++|++.+.+++. .|+++
T Consensus       295 i~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         295 VLGSHLGP----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             EEEeccCc----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            77765432    358889999999988765557899999999999999988774 47663

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.2e-42  Score=326.10  Aligned_cols=337  Identities=31%  Similarity=0.427  Sum_probs=283.9

Q ss_pred             cchhhhccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      |||+++..++. +++++.+.|+| .++||+||++++++|++|+..+.|.++...+|.++|||++|+|+++|++++.+++|
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G   79 (345)
T cd08286           1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG   79 (345)
T ss_pred             CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence            68888888776 99999999996 89999999999999999999988876555568899999999999999999999999


Q ss_pred             CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC--ceEeCCCC
Q 017336           83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL  160 (373)
Q Consensus        83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p~~  160 (373)
                      |+|++.+...|+.|++|..++++.|+...+..  |.                   ...|+|++|+.++++  .++++|++
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------------------~~~g~~~~~~~v~~~~~~~~~lp~~  138 (345)
T cd08286          80 DRVLISCISSCGTCGYCRKGLYSHCESGGWIL--GN-------------------LIDGTQAEYVRIPHADNSLYKLPEG  138 (345)
T ss_pred             CEEEECCcCCCCCChHHHCcCcccCCCccccc--cc-------------------ccCCeeeeEEEcccccCceEECCCC
Confidence            99999999999999999999999998643321  11                   123699999999987  99999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      ++..+++.+++.+++||.++.....+.++++|||.|+|.+|++++|+|+.+|+.+|+++++++++.+.++++|++.++++
T Consensus       139 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~  218 (345)
T cd08286         139 VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNS  218 (345)
T ss_pred             CCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecc
Confidence            99999999999999999877777889999999999889999999999999994488899899999999999999988887


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccC
Q 017336          241 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGN  318 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~  318 (373)
                      .+.+  +.+.+.+.+.+ ++|++|||+|....+..+++.|+++ |+++.+|.....  ..+.... +.+++++.+.... 
T Consensus       219 ~~~~--~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~-  292 (345)
T cd08286         219 AKGD--AIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGKP--VDLHLEKLWIKNITITTGLVD-  292 (345)
T ss_pred             cccc--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccCCC--CCcCHHHHhhcCcEEEeecCc-
Confidence            7654  77777777766 8999999999877889999999997 999999865422  3333333 4478888765322 


Q ss_pred             CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC---ceeEEEec
Q 017336          319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE---GLRCIISM  371 (373)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~---~~k~v~~~  371 (373)
                         .+.+.++++++.++.+.+.+++++.|+++++++|++.+.+..   ..|++|++
T Consensus       293 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         293 ---TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             ---hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence               135788899999998877666789999999999999988762   45998864

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=1.6e-42  Score=329.65  Aligned_cols=356  Identities=28%  Similarity=0.391  Sum_probs=283.1

Q ss_pred             cchhhhccCCCCeEEEEeecCCCC-CCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      |||+++.+++. +++++++.|.|. +++|+||+.++++|++|+..+.|.++..++|.++|||++|+|+++|++++.+++|
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   79 (386)
T cd08283           1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG   79 (386)
T ss_pred             CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence            78999887654 999999999984 9999999999999999999998877666678999999999999999999999999


Q ss_pred             CEEeecCcCCCCCCccccCCCcCcCccccccC-cccccccCCCcccccCCCccccccCCcceeeEEEEecC--ceEeCCC
Q 017336           83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINP-VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINP  159 (373)
Q Consensus        83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~-~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p~  159 (373)
                      |+|++.+..+|+.|.+|..+..++|++..... +.|.....   .....|...-.....|+|++|+.++++  .++++|+
T Consensus        80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~  156 (386)
T cd08283          80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHA---GAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPD  156 (386)
T ss_pred             CEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccc---cccccccccccCCCCCeeEEEEEcccccCeEEECCC
Confidence            99999999999999999999999998654321 10100000   000000000000124799999999988  8999999


Q ss_pred             CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      ++++++++.+++.++|||+++ +.+.+.++++|||+|+|.+|++++++|+.+|+.+|+++++++++.+.+++++...+++
T Consensus       157 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~  235 (386)
T cd08283         157 DLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETIN  235 (386)
T ss_pred             CCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEc
Confidence            999999999999999999987 7789999999999988999999999999999856999999999999999984445666


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCC---------------------hHhHHHHHHHhhcCCcEEEEEcCCCCCce
Q 017336          240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGN---------------------IDNMISAFECVHDGWGVAVLVGVPSKDAV  297 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~---------------------~~~~~~~~~~l~~~~g~~v~~g~~~~~~~  297 (373)
                      +...+ .+.+.+.+++.+ ++|++||++|+                     ...+..++++++++ |+++.+|..... .
T Consensus       236 ~~~~~-~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~~~-~  312 (386)
T cd08283         236 FEEVD-DVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYGGT-V  312 (386)
T ss_pred             CCcch-HHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCCCC-c
Confidence            55431 267778788776 89999999975                     24678899999997 999999876432 2


Q ss_pred             eeccc-hhhcccceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC-c-eeEEEe
Q 017336          298 FMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-G-LRCIIS  370 (373)
Q Consensus       298 ~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~-~-~k~v~~  370 (373)
                      ..... ..+.+++++.++...   ..+.+.++++++.++++...+++++.|+++++++|++.+.+++ . +|++|+
T Consensus       313 ~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~  385 (386)
T cd08283         313 NKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLK  385 (386)
T ss_pred             CccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEec
Confidence            22232 234478888876422   2346888999999998877666778999999999999988776 3 599885

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.5e-42  Score=324.07  Aligned_cols=338  Identities=29%  Similarity=0.425  Sum_probs=285.7

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   83 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   83 (373)
                      |||+++..++.++++.+.+.|.+.++||+||+.++++|++|+....|..+...+|.++|+|++|+|+.+|++++.|++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd   80 (345)
T cd08260           1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD   80 (345)
T ss_pred             CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence            79999988888899999999999999999999999999999998888765556688999999999999999999999999


Q ss_pred             EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC--ceEeCCCCC
Q 017336           84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLA  161 (373)
Q Consensus        84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p~~~  161 (373)
                      +|+..+..+|+.|.+|+.|..+.|++.+..   |+                   .+.|+|++|+.+++.  .++++|+++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~v~~~~~~~~~iP~~~  138 (345)
T cd08260          81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQP---GF-------------------THPGSFAEYVAVPRADVNLVRLPDDV  138 (345)
T ss_pred             EEEECCCCCCCCCccccCcCcccCCCCccc---cc-------------------CCCCcceeEEEcccccCceEECCCCC
Confidence            999888889999999999999999975432   21                   123699999999974  999999999


Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  241 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~  241 (373)
                      ++++++.++..+.|||+++...+++.++++|+|+|+|.+|++++|+|+.+|+ .|+++.+++++.+.++++|++.+++.+
T Consensus       139 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~  217 (345)
T cd08260         139 DFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNAS  217 (345)
T ss_pred             CHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccc
Confidence            9999999999999999998778889999999999999999999999999999 789998999999999999999898876


Q ss_pred             C-CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCce-eeccchhh-cccceEEEEeccC
Q 017336          242 E-HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV-FMTKPINV-LNERTLKGTFFGN  318 (373)
Q Consensus       242 ~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~-~~~~~~~~-~~~~~i~g~~~~~  318 (373)
                      . .+  +.+.+.....+++|++||++|+......++++++++ |+++.+|....... ..+....+ .++.++.++... 
T Consensus       218 ~~~~--~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  293 (345)
T cd08260         218 EVED--VAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM-  293 (345)
T ss_pred             cchh--HHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC-
Confidence            5 33  667777766658999999999767888999999997 99999987643321 22333333 477787776532 


Q ss_pred             CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336          319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  370 (373)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~  370 (373)
                        ..+.+++++++++++.+.+.+++.+.++++++++|++.+.+++. .|+|++
T Consensus       294 --~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         294 --PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             --CHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence              23468889999999988765557889999999999999988775 477654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=2.1e-42  Score=325.19  Aligned_cols=336  Identities=27%  Similarity=0.422  Sum_probs=281.3

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC------------CCCCCccccccceEEEEE
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ------------TPLFPRIFGHEAAGVVES   71 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~------------~~~~p~i~G~e~~G~V~~   71 (373)
                      |||+++..++.++++.+++.|+++++||+|++.++++|++|+....+.++            ...+|.++|+|++|+|++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~   80 (350)
T cd08240           1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA   80 (350)
T ss_pred             CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence            78999988888899999999999999999999999999999988776543            234567899999999999


Q ss_pred             eCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEec
Q 017336           72 VGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS  151 (373)
Q Consensus        72 vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~  151 (373)
                      +|++++.+++||+|++.+...|+.|.+|.++++++|......   |..                   ..|+|++|+.++.
T Consensus        81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~~~~  138 (350)
T cd08240          81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRAL---GIF-------------------QDGGYAEYVIVPH  138 (350)
T ss_pred             eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCce---eee-------------------ccCcceeeEEecH
Confidence            999999999999999999999999999999999999763222   111                   2369999999999


Q ss_pred             CceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh
Q 017336          152 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  231 (373)
Q Consensus       152 ~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~  231 (373)
                      +.++++|+++++.+++.+++.+.|||+++.....+.++++|||+|+|.+|++++|+|+.+|+++|+++++++++.+.+++
T Consensus       139 ~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~  218 (350)
T cd08240         139 SRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA  218 (350)
T ss_pred             HHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence            99999999999999999999999999987776667789999999889999999999999999778889899999999999


Q ss_pred             cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceE
Q 017336          232 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTL  311 (373)
Q Consensus       232 lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i  311 (373)
                      +|++.+++..+..  +.+.+.+..++++|++||++|+...+..++++|+++ |+++.+|............. ..++.++
T Consensus       219 ~g~~~~~~~~~~~--~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~i  294 (350)
T cd08240         219 AGADVVVNGSDPD--AAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLPLL-PLRALTI  294 (350)
T ss_pred             hCCcEEecCCCcc--HHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHHHH-hhcCcEE
Confidence            9998888765544  666677766658999999999768899999999997 99999987653322232222 2377888


Q ss_pred             EEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336          312 KGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  370 (373)
Q Consensus       312 ~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~  370 (373)
                      .++.....   +++.++++++.++.+...  ..+.|+++++++|++.+.+++. .|++++
T Consensus       295 ~~~~~~~~---~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  349 (350)
T cd08240         295 QGSYVGSL---EELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLK  349 (350)
T ss_pred             EEcccCCH---HHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence            77654332   468889999999977643  5678999999999999987774 588775

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=8e-42  Score=319.97  Aligned_cols=332  Identities=29%  Similarity=0.442  Sum_probs=281.5

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC---CCCCCccccccceEEEEEeCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |||+++..++.++++.+.+.|++++++|+|++.++++|++|+....|.++   ...+|.++|+|++|+|+++|+++..|+
T Consensus         1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~   80 (340)
T cd05284           1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK   80 (340)
T ss_pred             CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence            68999998877799999999999999999999999999999998877553   345678999999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||+|++.+..+|+.|..|..|..++|.+..+.   |+.                   ..|+|++|+.++++.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~v~~~~~~~~P~~  138 (340)
T cd05284          81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFP---GIG-------------------TDGGFAEYLLVPSRRLVKLPRG  138 (340)
T ss_pred             CCCEEEEcCCCCCCCChHHhCcCcccCCCCccc---Ccc-------------------CCCcceeeEEecHHHeEECCCC
Confidence            999999999999999999999999999987765   321                   1369999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhc-cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHhcCCceee
Q 017336          161 APLDKVCILSCGVSTGLGATLNV-AKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFGVTDFV  238 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~-~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~lg~~~vi  238 (373)
                      +++++++.+++.+.|||+++... ..+.++++|||+|+|.+|++++|+|+.+| . +|+++.+++++.+.++++|+++++
T Consensus       139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~  217 (340)
T cd05284         139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVL  217 (340)
T ss_pred             CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEE
Confidence            99999999999999999987665 46888999999999889999999999999 6 788888889999999999998888


Q ss_pred             cCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEec
Q 017336          239 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFF  316 (373)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~  316 (373)
                      +++..   +.+.+++.+++ ++|+++|++|+......++++|+++ |+++.+|....   ....... +.+++++.++..
T Consensus       218 ~~~~~---~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~---~~~~~~~~~~~~~~~~~~~~  290 (340)
T cd05284         218 NASDD---VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH---GRLPTSDLVPTEISVIGSLW  290 (340)
T ss_pred             cCCcc---HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC---CccCHHHhhhcceEEEEEec
Confidence            76653   66778777776 8999999999877889999999997 99999987542   2222222 347888877653


Q ss_pred             cCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          317 GNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       317 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      .   ..+.+.+++++++++.+.+   ..+.|+++++++|++.+.+++. +|+++.+
T Consensus       291 ~---~~~~~~~~~~~l~~g~l~~---~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         291 G---TRAELVEVVALAESGKVKV---EITKFPLEDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             c---cHHHHHHHHHHHHhCCCCc---ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence            2   2346888999999998754   3568999999999999988875 4887653

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9.4e-42  Score=322.69  Aligned_cols=360  Identities=33%  Similarity=0.498  Sum_probs=287.9

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCC---CC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD---LE   80 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~---~~   80 (373)
                      |||+++..++.++++.+.++|.++++||+|++.++++|++|+....+..+. .+|.++|||++|+|+.+|++++.   |+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~   79 (367)
T cd08263           1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS   79 (367)
T ss_pred             CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence            689999888777899999999999999999999999999999988776543 56889999999999999999988   99


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccC-CCccccccCCcceeeEEEEecCceEeCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSIN-GEPVNHFLGTSTFSEYTVVHSGCVAKINP  159 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~-g~~~~~~~~~G~~a~~~~v~~~~~~~~p~  159 (373)
                      +||+|++.+..+|+.|.+|..+..++|.+..+....+-...+|...+... ++.++ ....|+|++|+.++++.++++|+
T Consensus        80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~P~  158 (367)
T cd08263          80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVY-MYSMGGLAEYAVVPATALAPLPE  158 (367)
T ss_pred             CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccc-cccCCcceeEEEechhhEEECCC
Confidence            99999999999999999999999999997652211110001110000000 00000 01237999999999999999999


Q ss_pred             CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      ++++.+++.++..++|||.++.....+.++++|||+|+|.+|++++++|+.+|+..|+++++++++.+.++++|++.+++
T Consensus       159 ~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~  238 (367)
T cd08263         159 SLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVN  238 (367)
T ss_pred             CCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEec
Confidence            99999999999999999999888788899999999988999999999999999955888888999999999999998888


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEecc
Q 017336          240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG  317 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~  317 (373)
                      .++.+  +.+.++...++ ++|++||++++......++++|+++ |+++.+|.........+....+ .++.++.++.. 
T Consensus       239 ~~~~~--~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-  314 (367)
T cd08263         239 AAKED--AVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYG-  314 (367)
T ss_pred             CCccc--HHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCC-
Confidence            77655  77778777765 8999999999854888999999997 9999998654322223333344 47777777432 


Q ss_pred             CCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336          318 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  370 (373)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~  370 (373)
                       ....+.++++++++.++.+.+.+++++.|+++++.+|++.+.+++. +|+|+.
T Consensus       315 -~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         315 -ARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             -CCcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence             1223468889999999988766567889999999999999988774 588763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=1.3e-41  Score=318.72  Aligned_cols=337  Identities=29%  Similarity=0.437  Sum_probs=274.0

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCC---CCCCCCccccccceEEEEEeCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      ||++++.++++.+++.+.+.|.|+++||+||++++++|++|+.++.+..   ....+|.++|||++|+|+++|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~   80 (341)
T PRK05396          1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK   80 (341)
T ss_pred             CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence            6899998888779999999999999999999999999999998765521   1234678899999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||+|++.+.++|..|+.|..+++++|.+..+.   |                   ....|+|++|+.+++++++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------------------~~~~g~~~~~~~v~~~~~~~iP~~  138 (341)
T PRK05396         81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGV---G-------------------VNRPGAFAEYLVIPAFNVWKIPDD  138 (341)
T ss_pred             CCCEEEECCCCCCCCChhhhCcChhhCCCccee---e-------------------ecCCCcceeeEEechHHeEECcCC
Confidence            999999999999999999999999999864322   1                   112369999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      +++++++.+ ..+.++++++..  ...++++|+|.|+|.+|++++|+|+++|+++|+++++++++.+.++++|++.++++
T Consensus       139 l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~  215 (341)
T PRK05396        139 IPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV  215 (341)
T ss_pred             CCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence            998888754 456666655432  34589999999889999999999999999668888888999999999999998887


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCC
Q 017336          241 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY  319 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  319 (373)
                      ++.+  +.+.+++.+.+ ++|++|||.|+...+..++++++++ |+++.+|.......+.. ...+.+++++.++...  
T Consensus       216 ~~~~--~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~--  289 (341)
T PRK05396        216 AKED--LRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGDMAIDW-NKVIFKGLTIKGIYGR--  289 (341)
T ss_pred             cccc--HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCcccH-HHHhhcceEEEEEEcc--
Confidence            7655  77788877766 8999999999877889999999997 99999987653333332 2223477788776421  


Q ss_pred             CCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEecC
Q 017336          320 KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME  372 (373)
Q Consensus       320 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~~  372 (373)
                      ...+.+..+++++.++ +.+.+++.+.|+++++++|++.+.+++.+|++++++
T Consensus       290 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~  341 (341)
T PRK05396        290 EMFETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDWD  341 (341)
T ss_pred             CccchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence            1223566788888888 545555789999999999999998776569998764

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=3.1e-41  Score=316.46  Aligned_cols=338  Identities=28%  Similarity=0.403  Sum_probs=276.2

Q ss_pred             cchhhhccCCCCeEEEEeecCCCC-CCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      |||+++..++ .++++++++|.|. ++||+|++.++++|+.|+....|.++ ..+|.++|+|++|+|+++|++++.+++|
T Consensus         1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G   78 (344)
T cd08284           1 MKAVVFKGPG-DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG   78 (344)
T ss_pred             CeeEEEecCC-CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence            6888987765 4999999999985 99999999999999999988877554 3457889999999999999999999999


Q ss_pred             CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC--ceEeCCCC
Q 017336           83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL  160 (373)
Q Consensus        83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p~~  160 (373)
                      |+|++.+..+|+.|.+|+.++.+.|++..+.   |..   +            .....|+|++|+.++++  .++++|++
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~------------~~~~~g~~~~~~~v~~~~~~~~~~p~~  140 (344)
T cd08284          79 DRVVSPFTIACGECFYCRRGQSGRCAKGGLF---GYA---G------------SPNLDGAQAEYVRVPFADGTLLKLPDG  140 (344)
T ss_pred             CEEEEcccCCCCCChHHhCcCcccCCCCccc---ccc---c------------cCCCCCceeEEEEcccccCceEECCCC
Confidence            9999999999999999999999999764322   110   0            00123699999999865  99999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      +++++++.+++++.|||+++. ...+.++++|||+|+|.+|++++|+|+.+|+.+|+++++++++.+.++++|+. .++.
T Consensus       141 l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~  218 (344)
T cd08284         141 LSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINF  218 (344)
T ss_pred             CCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEec
Confidence            999999999999999999875 47889999999998899999999999999975788888889999999999975 3454


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-hhhcccceEEEEeccC
Q 017336          241 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGN  318 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~  318 (373)
                      +..+  +.+.+.+.+++ ++|++||++++......++++++++ |+++.+|...... ..... ..+.++.++.+..   
T Consensus       219 ~~~~--~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~---  291 (344)
T cd08284         219 EDAE--PVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAEE-FPFPGLDAYNKNLTLRFGR---  291 (344)
T ss_pred             CCcC--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCCCC-ccccHHHHhhcCcEEEEec---
Confidence            4433  77778887776 8999999999877899999999997 9999999765221 12222 2244777776542   


Q ss_pred             CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEe
Q 017336          319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS  370 (373)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~  370 (373)
                      ....+.+.++++++.++.+.+.+++.+.|+++++++|++.+.+++..|++++
T Consensus       292 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~  343 (344)
T cd08284         292 CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD  343 (344)
T ss_pred             CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence            2234578899999999988765567889999999999998887666787764

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=4.5e-41  Score=320.84  Aligned_cols=338  Identities=18%  Similarity=0.230  Sum_probs=273.1

Q ss_pred             cccchhhhcc--CCC---CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC----------CCCCCccccccce
Q 017336            2 SSTAAAVAWE--AGK---PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ----------TPLFPRIFGHEAA   66 (373)
Q Consensus         2 ~~~~a~~~~~--~~~---~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~----------~~~~p~i~G~e~~   66 (373)
                      .+|||+++..  .+.   .+++++++.|.++++||+|++.++++|++|+....+...          ....+.++|||++
T Consensus        11 ~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~   90 (393)
T cd08246          11 EKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDAS   90 (393)
T ss_pred             hhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceE
Confidence            4689988752  232   378899999999999999999999999999987766411          1112358999999


Q ss_pred             EEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeE
Q 017336           67 GVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEY  146 (373)
Q Consensus        67 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~  146 (373)
                      |+|+++|++++.+++||+|++.+...|+.|..|.++..++|....+.   |+.                  ...|+|++|
T Consensus        91 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~---g~~------------------~~~g~~a~y  149 (393)
T cd08246          91 GIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIW---GYE------------------TNYGSFAQF  149 (393)
T ss_pred             EEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccc---ccc------------------CCCCcceeE
Confidence            99999999999999999999999999999999999999999764433   322                  123699999


Q ss_pred             EEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhc--cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          147 TVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV--AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       147 ~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      +++++.+++++|+++++++++.+++++.|||+++...  +.+.++++|||+|+ |.+|++++++|+.+|+ +++++++++
T Consensus       150 ~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~s~  228 (393)
T cd08246         150 ALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSE  228 (393)
T ss_pred             EEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeCCH
Confidence            9999999999999999999999999999999987654  67899999999997 9999999999999999 677788899


Q ss_pred             hHHHHHHhcCCceeecCCCCC--------------------ccHHHHHHHHcCC--CccEEEEccCChHhHHHHHHHhhc
Q 017336          224 KRFEEAKKFGVTDFVNTSEHD--------------------RPIQEVIAEMTNG--GVDRSVECTGNIDNMISAFECVHD  281 (373)
Q Consensus       224 ~~~~~~~~lg~~~vi~~~~~~--------------------~~~~~~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~  281 (373)
                      ++++.++++|++.++++++.+                    ..+.+.+.+.+++  ++|++||++|+ ..+..+++++++
T Consensus       229 ~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~~~~~~~l~~  307 (393)
T cd08246         229 EKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATFPTSVFVCDR  307 (393)
T ss_pred             HHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhHHHHHHHhcc
Confidence            999999999999888864421                    1255667777776  69999999997 778899999999


Q ss_pred             CCcEEEEEcCCCCCceeeccch-hhcccceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHH
Q 017336          282 GWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMV  360 (373)
Q Consensus       282 ~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~  360 (373)
                      + |+++.+|...... ...... .+.++.++.++....   .+.+.+++++++++.+..  .++++|+++++++|++.+.
T Consensus       308 ~-G~~v~~g~~~~~~-~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~  380 (393)
T cd08246         308 G-GMVVICAGTTGYN-HTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP--CLSKVFSLDETPDAHQLMH  380 (393)
T ss_pred             C-CEEEEEcccCCCC-CCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCcee--eeeEEEeHHHHHHHHHHHH
Confidence            7 9999998654221 222222 234677777765433   246888999999997763  3778999999999999998


Q ss_pred             cC-Cc-eeEEE
Q 017336          361 KG-EG-LRCII  369 (373)
Q Consensus       361 ~~-~~-~k~v~  369 (373)
                      ++ +. +|+++
T Consensus       381 ~~~~~~gkvvv  391 (393)
T cd08246         381 RNQHHVGNMAV  391 (393)
T ss_pred             hCccccceEEE
Confidence            87 54 47665

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.1e-40  Score=311.99  Aligned_cols=333  Identities=32%  Similarity=0.550  Sum_probs=278.8

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   83 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   83 (373)
                      |||+++..++. +++.+.+.|.++++||+|+|.++++|+.|+....+..+...+|.++|+|++|+|+++|++++.|++||
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd   79 (337)
T cd08261           1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD   79 (337)
T ss_pred             CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence            68888887765 89999999999999999999999999999998887665556688999999999999999999999999


Q ss_pred             EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336           84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  163 (373)
Q Consensus        84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~  163 (373)
                      +|+..+..+|+.|..|+.++.|.|...+..   +                   +...|+|++|+.++++ ++++|+++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------------------~~~~g~~~~~v~v~~~-~~~~p~~~~~  136 (337)
T cd08261          80 RVVVDPYISCGECYACRKGRPNCCENLQVL---G-------------------VHRDGGFAEYIVVPAD-ALLVPEGLSL  136 (337)
T ss_pred             EEEECCCCCCCCChhhhCcCcccCCCCCee---e-------------------ecCCCcceeEEEechh-eEECCCCCCH
Confidence            999999999999999999999999644322   1                   1123699999999999 9999999999


Q ss_pred             hhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCC
Q 017336          164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH  243 (373)
Q Consensus       164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~  243 (373)
                      ++++++ ..+.++++++ ....+.++++|||+|+|.+|.+++|+|+.+|+ +|+++.+++++.+.++++|+++++++.+.
T Consensus       137 ~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~~  213 (337)
T cd08261         137 DQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGDE  213 (337)
T ss_pred             HHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCccc
Confidence            998877 4678888875 77889999999999889999999999999999 79999889999999999999999887765


Q ss_pred             CccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc-ccceEEEEeccCCCC
Q 017336          244 DRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKP  321 (373)
Q Consensus       244 ~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~  321 (373)
                      +  +.+.+.+.+++ ++|++||++|+...+..++++|+++ |+++.+|.....  .......+. +++++.++.   ...
T Consensus       214 ~--~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~~~--~~~~~~~~~~~~~~~~~~~---~~~  285 (337)
T cd08261         214 D--VAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSKGP--VTFPDPEFHKKELTILGSR---NAT  285 (337)
T ss_pred             C--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCCCC--CccCHHHHHhCCCEEEEec---cCC
Confidence            4  77888888776 7999999998878889999999997 999999866422  222222333 667776653   223


Q ss_pred             CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC-c-eeEEEec
Q 017336          322 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-G-LRCIISM  371 (373)
Q Consensus       322 ~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~-~-~k~v~~~  371 (373)
                      .+.++++++++.++.+.+.+.+...++++++++|++.+.+++ . .|+++++
T Consensus       286 ~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         286 REDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             hhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence            346888999999998876434778999999999999998873 4 5888864

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=9.3e-41  Score=315.57  Aligned_cols=336  Identities=26%  Similarity=0.431  Sum_probs=266.9

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC---CCCCCccccccceEEEEEeCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      ++++++..+.. +++++.+.|.|+++||+||+.++++|++|+....+...   ...+|.++|||++|+|+++|++++.|+
T Consensus        18 ~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
T PLN02702         18 NMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLV   96 (364)
T ss_pred             cceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCC
Confidence            55555565544 88889999999999999999999999999988765321   123578899999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||+|++.+..+|++|.+|.+|.++.|++..+.   +..                  ...|+|++|+.++++.++++|++
T Consensus        97 ~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~---~~~------------------~~~g~~~~y~~v~~~~~~~~P~~  155 (364)
T PLN02702         97 VGDRVALEPGISCWRCNLCKEGRYNLCPEMKFF---ATP------------------PVHGSLANQVVHPADLCFKLPEN  155 (364)
T ss_pred             CCCEEEEcCCCCCCCCcchhCcCcccCCCcccc---CCC------------------CCCCcccceEEcchHHeEECCCC
Confidence            999999999999999999999999999762211   100                  01369999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      +++.+++.. .++.++|+++ ....+.++++|||+|+|++|++++|+|+++|+..|+++++++++.+.++++|++.++++
T Consensus       156 l~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~  233 (364)
T PLN02702        156 VSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLV  233 (364)
T ss_pred             CCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEec
Confidence            999888752 2445577775 67889999999999989999999999999999778888889999999999999887765


Q ss_pred             CCCCccHHHHHHHH---cCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccch-hhcccceEEEEec
Q 017336          241 SEHDRPIQEVIAEM---TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFF  316 (373)
Q Consensus       241 ~~~~~~~~~~~~~~---~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~  316 (373)
                      .....++.+.+...   +++++|++||++|++..+..++++++++ |+++.+|.....  ...... ...+++++.++..
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~  310 (364)
T PLN02702        234 STNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHNE--MTVPLTPAAAREVDVVGVFR  310 (364)
T ss_pred             CcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCCC--CcccHHHHHhCccEEEEecc
Confidence            43222366665544   3348999999999768899999999997 999999865422  222222 2347888887653


Q ss_pred             cCCCCCCCHHHHHHHHHcCCCCCCCceeeeecc--ccHHHHHHHHHcCCc-eeEEEe
Q 017336          317 GNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF--SEINKAFEYMVKGEG-LRCIIS  370 (373)
Q Consensus       317 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l--~~~~~a~~~l~~~~~-~k~v~~  370 (373)
                      .    ...+..++++++++++.+.+++++.|++  +++++|++.+.+++. .|++|.
T Consensus       311 ~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        311 Y----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             C----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence            2    2367889999999988766667888666  799999999887764 588875

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=4.1e-41  Score=313.09  Aligned_cols=309  Identities=19%  Similarity=0.266  Sum_probs=251.4

Q ss_pred             cchhhhccCCCC-----eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCC
Q 017336            4 TAAAVAWEAGKP-----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVS   77 (373)
Q Consensus         4 ~~a~~~~~~~~~-----~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~   77 (373)
                      |||+++.+++.|     +++.+.+.|.|+++||+||+.++++|++|+....|.++. ..+|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~   80 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL   80 (324)
T ss_pred             CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence            689998888753     788899999999999999999999999999988886542 45688999999999999999999


Q ss_pred             C-CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEe
Q 017336           78 D-LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK  156 (373)
Q Consensus        78 ~-~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~  156 (373)
                      . |++||+|+..+.                                                ..|+|+||+.++++.+++
T Consensus        81 ~~~~vGd~V~~~~~------------------------------------------------~~g~~a~~~~v~~~~~~~  112 (324)
T cd08291          81 AQSLIGKRVAFLAG------------------------------------------------SYGTYAEYAVADAQQCLP  112 (324)
T ss_pred             ccCCCCCEEEecCC------------------------------------------------CCCcchheeeecHHHeEE
Confidence            6 999999985410                                                015999999999999999


Q ss_pred             CCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEE-C-CCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC
Q 017336          157 INPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF-G-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  234 (373)
Q Consensus       157 ~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~-G-~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~  234 (373)
                      +|+++++++++++++.++|||.. ...... ++++++|+ | +|++|++++|+|+.+|+ +|+++++++++++.++++|+
T Consensus       113 iP~~~~~~~aa~~~~~~~ta~~~-~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~  189 (324)
T cd08291         113 LPDGVSFEQGASSFVNPLTALGM-LETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGA  189 (324)
T ss_pred             CCCCCCHHHHhhhcccHHHHHHH-HHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCC
Confidence            99999999999888889999754 455555 56667665 4 59999999999999999 79999899999999999999


Q ss_pred             ceeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccch-hhcccceEE
Q 017336          235 TDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLK  312 (373)
Q Consensus       235 ~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~  312 (373)
                      ++++++.+.+  +.+.+++.+.+ ++|++||++|+ ......+++++++ |+++.+|.........++.. .+.+++++.
T Consensus       190 ~~~i~~~~~~--~~~~v~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  265 (324)
T cd08291         190 EYVLNSSDPD--FLEDLKELIAKLNATIFFDAVGG-GLTGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIE  265 (324)
T ss_pred             cEEEECCCcc--HHHHHHHHhCCCCCcEEEECCCc-HHHHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEE
Confidence            9999877655  88888888876 89999999998 5567789999997 99999997543321112222 244888998


Q ss_pred             EEeccCCCC---CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336          313 GTFFGNYKP---RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  370 (373)
Q Consensus       313 g~~~~~~~~---~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~  370 (373)
                      ++....+..   .+.+.+++++++ +.+  +++++++|+|+++++|++.+.+++. +|+++.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         266 GFWLTTWLQKLGPEVVKKLKKLVK-TEL--KTTFASRYPLALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             EEEHHHhhcccCHHHHHHHHHHHh-Ccc--ccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence            887654322   234677778876 654  4568899999999999999988764 588763

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=2.7e-40  Score=310.05  Aligned_cols=336  Identities=29%  Similarity=0.482  Sum_probs=277.4

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   83 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   83 (373)
                      |||+++.+++. +++++.+.|++.+++|+|+++++++|+.|+....+.++....|.++|+|++|+|+++|++++.+++||
T Consensus         1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd   79 (343)
T cd08235           1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD   79 (343)
T ss_pred             CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence            68898887765 89999999999999999999999999999998877554344577899999999999999999999999


Q ss_pred             EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCc-----eEeCC
Q 017336           84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGC-----VAKIN  158 (373)
Q Consensus        84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~-----~~~~p  158 (373)
                      +|++.++.+|++|++|..++.++|......   |.                   ...|+|++|+.+++++     ++++|
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~v~v~~~~~~~~~~~~lP  137 (343)
T cd08235          80 RVFVAPHVPCGECHYCLRGNENMCPNYKKF---GN-------------------LYDGGFAEYVRVPAWAVKRGGVLKLP  137 (343)
T ss_pred             EEEEccCCCCCCChHHHCcCcccCCCccee---cc-------------------CCCCcceeeEEecccccccccEEECC
Confidence            999999999999999999999999865432   11                   1236999999999998     99999


Q ss_pred             CCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee
Q 017336          159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  238 (373)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi  238 (373)
                      +++++.+++.+ ..+.+||+++. ...+.++++|||+|+|.+|++++|+|++.|++.|+++++++++.+.++++|++.++
T Consensus       138 ~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~  215 (343)
T cd08235         138 DNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTI  215 (343)
T ss_pred             CCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEe
Confidence            99999998776 68899999875 45899999999998899999999999999994488888999999999999998888


Q ss_pred             cCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEec
Q 017336          239 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFF  316 (373)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~  316 (373)
                      ++++.+  +.+.+.+.+++ ++|+++|++++...+..++++++++ |+++.+|..............+ .+++.+.++..
T Consensus       216 ~~~~~~--~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (343)
T cd08235         216 DAAEED--LVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYA  292 (343)
T ss_pred             cCCccC--HHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEec
Confidence            877655  77788877776 7999999999867889999999997 9999998654322222222222 36667766543


Q ss_pred             cCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEe
Q 017336          317 GNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS  370 (373)
Q Consensus       317 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~  370 (373)
                      ..   .+.++.++++++++.+.+.+.+...|+++++.+|++.+.+++..|++++
T Consensus       293 ~~---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~  343 (343)
T cd08235         293 AS---PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGKSLKIVIT  343 (343)
T ss_pred             CC---hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCCcEEEEeC
Confidence            22   3468889999999988754457788999999999999988774487764

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=2.1e-40  Score=314.11  Aligned_cols=346  Identities=25%  Similarity=0.345  Sum_probs=273.3

Q ss_pred             cchhhhccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      ||++++..++ +++++++++|.+ +++||+|||.++++|++|++...|..+ ..+|.++|||++|+|+++|+++..+++|
T Consensus         1 m~~~~~~~~~-~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G   78 (375)
T cd08282           1 MKAVVYGGPG-NVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG   78 (375)
T ss_pred             CceEEEecCC-ceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence            5888887766 499999999996 899999999999999999999887655 3468899999999999999999999999


Q ss_pred             CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC--ceEeCCCC
Q 017336           83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL  160 (373)
Q Consensus        83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p~~  160 (373)
                      |+|++.+..+|+.|..|..++++.|.+.... ..|..       +...+    .....|+|++|+.++..  .++++|++
T Consensus        79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~-~~~~~-------~~~~~----~~~~~g~~a~y~~v~~~~~~~~~lP~~  146 (375)
T cd08282          79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPG-RAGGA-------YGYVD----MGPYGGGQAEYLRVPYADFNLLKLPDR  146 (375)
T ss_pred             CEEEEeCCCCCCCCHHHHCcCcccCCCCCcc-ccccc-------ccccc----cCCCCCeeeeEEEeecccCcEEECCCC
Confidence            9999999999999999999999999763211 00000       00000    00013699999999976  89999999


Q ss_pred             CCch---hhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee
Q 017336          161 APLD---KVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF  237 (373)
Q Consensus       161 ~~~~---~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v  237 (373)
                      ++++   .++.++..++|||+++ ..+.+.++++|||.|+|.+|++++|+|+.+|+.+|+++++++++.+.++++|+. .
T Consensus       147 ~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~  224 (375)
T cd08282         147 DGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-P  224 (375)
T ss_pred             CChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-E
Confidence            9998   5677888899999987 778899999999998899999999999999976788899999999999999984 4


Q ss_pred             ecCCCCCccHHHHHHHHcCCCccEEEEccCChH-----------hHHHHHHHhhcCCcEEEEEcCCCCCc----------
Q 017336          238 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID-----------NMISAFECVHDGWGVAVLVGVPSKDA----------  296 (373)
Q Consensus       238 i~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~-----------~~~~~~~~l~~~~g~~v~~g~~~~~~----------  296 (373)
                      +++.+.+  +.+.+.+.+++++|+++||+|+..           .+..++++++++ |+++.+|......          
T Consensus       225 v~~~~~~--~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~~  301 (375)
T cd08282         225 IDFSDGD--PVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAAAKQ  301 (375)
T ss_pred             eccCccc--HHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCcccccccccccC
Confidence            5555433  777777776668999999998742           478999999997 9999888643211          


Q ss_pred             -eeeccchhh-cccceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336          297 -VFMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  371 (373)
Q Consensus       297 -~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~  371 (373)
                       ...+....+ .++..+.+...   ...+.+.+++++++++++.+..++.+.|+++++++|++.+.+++..|+++++
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~kvvv~~  375 (375)
T cd08282         302 GELSFDFGLLWAKGLSFGTGQA---PVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRLETKVVIKP  375 (375)
T ss_pred             ccccccHHHHHhcCcEEEEecC---CchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCCceEEEeCC
Confidence             011222222 35555555432   1234688899999999887655688999999999999999888755888753

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.8e-40  Score=308.07  Aligned_cols=317  Identities=26%  Similarity=0.398  Sum_probs=261.3

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   83 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   83 (373)
                      |||+++.+++ ++++++++.|+++++||+||+.++++|++|+....|.++   +|.++|||++|+|+++|++   +++||
T Consensus         1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~   73 (319)
T cd08242           1 MKALVLDGGL-DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK   73 (319)
T ss_pred             CeeEEEeCCC-cEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence            6889988765 599999999999999999999999999999998877543   5788999999999999998   68999


Q ss_pred             EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336           84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  163 (373)
Q Consensus        84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~  163 (373)
                      +|...+..+|+.|.+|..+.++.|......   +..                  ...|+|++|+++++++++++|++++.
T Consensus        74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------------------~~~g~~~~~~~v~~~~~~~lP~~~~~  132 (319)
T cd08242          74 RVVGEINIACGRCEYCRRGLYTHCPNRTVL---GIV------------------DRDGAFAEYLTLPLENLHVVPDLVPD  132 (319)
T ss_pred             eEEECCCcCCCCChhhhCcCcccCCCCccc---Ccc------------------CCCCceEEEEEechHHeEECcCCCCH
Confidence            999999999999999999999999865433   211                  01359999999999999999999998


Q ss_pred             hhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCC
Q 017336          164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH  243 (373)
Q Consensus       164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~  243 (373)
                      ++++.+ ..+.++|. +.+...+.++++|||+|+|.+|++++|+|+.+|+ +|++++.++++.+.++++|++.++++...
T Consensus       133 ~~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~  209 (319)
T cd08242         133 EQAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEAE  209 (319)
T ss_pred             HHhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCcccc
Confidence            888764 34556665 4577889999999999989999999999999999 69999889999999999999887765331


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCCCCC
Q 017336          244 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPR  322 (373)
Q Consensus       244 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~  322 (373)
                                ..++++|++||++|+...+..++++++++ |+++..+.......+  .... +.++.++.++..+     
T Consensus       210 ----------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~-----  271 (319)
T cd08242         210 ----------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAGPASF--DLTKAVVNEITLVGSRCG-----  271 (319)
T ss_pred             ----------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCCCCcc--CHHHheecceEEEEEecc-----
Confidence                      12238999999999867889999999997 999987764322222  2222 3477788776532     


Q ss_pred             CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEe
Q 017336          323 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS  370 (373)
Q Consensus       323 ~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~  370 (373)
                       .++++++++.++++++.+++++.|+++++++|++.+.++...|++++
T Consensus       272 -~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~  318 (319)
T cd08242         272 -PFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLR  318 (319)
T ss_pred             -cHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeC
Confidence             38889999999998766668899999999999999987765688876

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.2e-40  Score=310.32  Aligned_cols=325  Identities=22%  Similarity=0.314  Sum_probs=261.4

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-----------CCCCCccccccceEEEEEe
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-----------TPLFPRIFGHEAAGVVESV   72 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-----------~~~~p~i~G~e~~G~V~~v   72 (373)
                      |||+++..+  ++++++++.|+++++||+|++.++++|+.|+....|...           ...+|.++|+|++|+|+++
T Consensus         1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v   78 (341)
T cd08262           1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY   78 (341)
T ss_pred             CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence            689988766  599999999999999999999999999999988876221           2235788999999999999


Q ss_pred             CCCCCC-CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEec
Q 017336           73 GEGVSD-LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS  151 (373)
Q Consensus        73 G~~v~~-~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~  151 (373)
                      |++++. |++||+|++.+...|+.|+.|..|..+                                ...|+|+||+.+++
T Consensus        79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~--------------------------------~~~g~~~~~~~v~~  126 (341)
T cd08262          79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP--------------------------------EAPGGYAEYMLLSE  126 (341)
T ss_pred             CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc--------------------------------CCCCceeeeEEech
Confidence            999987 999999999999999999999432110                                01369999999999


Q ss_pred             CceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh
Q 017336          152 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  231 (373)
Q Consensus       152 ~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~  231 (373)
                      +.++++|+++++++++ ++.++++||++ ...++++++++|||+|+|.+|.+++|+|+.+|++.++++++++++.+.+++
T Consensus       127 ~~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~  204 (341)
T cd08262         127 ALLLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA  204 (341)
T ss_pred             HHeEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence            9999999999998876 56688899998 578899999999999889999999999999999768888889999999999


Q ss_pred             cCCceeecCCCCCc--cHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhccc
Q 017336          232 FGVTDFVNTSEHDR--PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNE  308 (373)
Q Consensus       232 lg~~~vi~~~~~~~--~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~  308 (373)
                      +|++.+++++..+.  .+. .+.....+ ++|++||++|+...+..++++++++ |+++.+|.......+... ..+.++
T Consensus       205 ~g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~-~~~~~~  281 (341)
T cd08262         205 MGADIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDNIEPA-LAIRKE  281 (341)
T ss_pred             cCCcEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCCccCHH-HHhhcc
Confidence            99988888765431  122 23344444 8999999998855788899999997 999999876422222111 113366


Q ss_pred             ceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336          309 RTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  370 (373)
Q Consensus       309 ~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~  370 (373)
                      .++.++...   ..+.+.+++++++++.+.+.+++.+.|+++++++|++.+.+++. .|++++
T Consensus       282 ~~~~~~~~~---~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         282 LTLQFSLGY---TPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             eEEEEEecc---cHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            666654321   12368889999999998876667899999999999999988775 487763

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.1e-40  Score=313.87  Aligned_cols=327  Identities=28%  Similarity=0.413  Sum_probs=265.2

Q ss_pred             CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCC------C-CCCCCccccccceEEEEEeCCCCCCCCCCCEEee
Q 017336           15 PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG------Q-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLP   87 (373)
Q Consensus        15 ~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~   87 (373)
                      ++++++++.|+++++||+|++.++++|++|+..+.+..      + ...+|.++|||++|+|+++|++++.|++||+|++
T Consensus        38 ~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~  117 (384)
T cd08265          38 ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTA  117 (384)
T ss_pred             CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEE
Confidence            49999999999999999999999999999998776321      1 1346789999999999999999999999999999


Q ss_pred             cCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC------
Q 017336           88 VFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA------  161 (373)
Q Consensus        88 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~------  161 (373)
                      .+..+|+.|+.|..++.+.|.+....   |+.                   ..|+|++|+.++++.++++|+++      
T Consensus       118 ~~~~~~~~~~~c~~~~~~~~~~~~~~---g~~-------------------~~g~~~~~v~v~~~~~~~lP~~~~~~~~~  175 (384)
T cd08265         118 EEMMWCGMCRACRSGSPNHCKNLKEL---GFS-------------------ADGAFAEYIAVNARYAWEINELREIYSED  175 (384)
T ss_pred             CCCCCCCCChhhhCcCcccCCCccee---eec-------------------CCCcceeeEEechHHeEECCccccccccC
Confidence            99999999999999999999853322   211                   13699999999999999999864      


Q ss_pred             -Cchhhhhcccchhhhhhhhhhc-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          162 -PLDKVCILSCGVSTGLGATLNV-AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       162 -~~~~aa~~~~~~~ta~~~l~~~-~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                       +.+ +++++.++++||+++... .+++++++|||+|+|.+|++++|+|+.+|+.+|+++++++++.+.++++|++.+++
T Consensus       176 ~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~  254 (384)
T cd08265         176 KAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFN  254 (384)
T ss_pred             CCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEc
Confidence             344 556667889999987665 68999999999988999999999999999877999988899999999999998887


Q ss_pred             CCCC-CccHHHHHHHHcCC-CccEEEEccCCh-HhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEe
Q 017336          240 TSEH-DRPIQEVIAEMTNG-GVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTF  315 (373)
Q Consensus       240 ~~~~-~~~~~~~~~~~~~~-~~d~vid~~g~~-~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~  315 (373)
                      +.+. ...+.+.+.+.+++ ++|+|+|++|++ ..+..++++|+++ |+++.+|.....  .......+ .+..++.++.
T Consensus       255 ~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~l~~~~  331 (384)
T cd08265         255 PTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAATT--VPLHLEVLQVRRAQIVGAQ  331 (384)
T ss_pred             ccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCCC--CcccHHHHhhCceEEEEee
Confidence            7643 12377888888877 899999999873 4778999999997 999999865432  22222222 3566777664


Q ss_pred             ccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEE
Q 017336          316 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII  369 (373)
Q Consensus       316 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~  369 (373)
                      -.  .....+.+++++++++.+.+.+++++.|+++++++|++.+.++...|+++
T Consensus       332 ~~--~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv  383 (384)
T cd08265         332 GH--SGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI  383 (384)
T ss_pred             cc--CCcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence            21  12346889999999998876556788999999999999977665567765

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=4.7e-40  Score=308.14  Aligned_cols=336  Identities=30%  Similarity=0.443  Sum_probs=271.2

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCC---CCCCCCccccccceEEEEEeCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |||+++..++..+++.+.+.|.|+++|++||+.++++|+.|+..+.+..   ....+|.++|+|++|+|+.+|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~   80 (341)
T cd05281           1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK   80 (341)
T ss_pred             CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence            6899988877679999999999999999999999999999988754321   2234577899999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||+|+..+.++|+.|.+|..+++|+|....   +.|.                   .+.|+|++|++++++.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------------~~~g~~~~~v~v~~~~~~~lP~~  138 (341)
T cd05281          81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTK---ILGV-------------------DTDGCFAEYVVVPEENLWKNDKD  138 (341)
T ss_pred             CCCEEEECCccCCCCChHHHCcCcccCcccc---eEec-------------------cCCCcceEEEEechHHcEECcCC
Confidence            9999999999999999999999999997532   2121                   12369999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      ++.+.+ +++..+.++++++.  ....++++|||.|+|.+|++++|+|+.+|+.+|++++++++|.+.++++|++.+++.
T Consensus       139 ~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~  215 (341)
T cd05281         139 IPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINP  215 (341)
T ss_pred             CCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCc
Confidence            988544 56667788887654  455789999999889999999999999998668888888999999999999888876


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCC
Q 017336          241 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY  319 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  319 (373)
                      ...+  +. .+.+.+++ ++|++||++|+......++++|+++ |+++.+|.......+.+....+.+++.+.+...  .
T Consensus       216 ~~~~--~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~  289 (341)
T cd05281         216 REED--VV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITG--R  289 (341)
T ss_pred             cccc--HH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEec--C
Confidence            5544  66 67777776 8999999999877889999999997 999999865432222222223346777766542  1


Q ss_pred             CCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEe
Q 017336          320 KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS  370 (373)
Q Consensus       320 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~  370 (373)
                      ...+.+.+++++++++.+.+.+++...++++++++|++.+.+++.+|++++
T Consensus       290 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~gk~vv~  340 (341)
T cd05281         290 KMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGKCGKVVLY  340 (341)
T ss_pred             CcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCCCceEEec
Confidence            223457789999999988766667788999999999999988775588875

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-40  Score=309.90  Aligned_cols=330  Identities=24%  Similarity=0.376  Sum_probs=274.5

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   83 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   83 (373)
                      |||+++..+++++++++.+.|.++++|++||+.++++|++|+....|..+..++|.++|||++|+|+.+|++++.+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~   80 (334)
T PRK13771          1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD   80 (334)
T ss_pred             CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence            68999999888899999999999999999999999999999988877666566788999999999999999998899999


Q ss_pred             EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336           84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  163 (373)
Q Consensus        84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~  163 (373)
                      +|++.+..+|+.|.+|..+.++.|.+....   |.                   ...|+|++|+.++.+.++++|+++++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~~~~~~~~~lp~~~~~  138 (334)
T PRK13771         81 RVASLLYAPDGTCEYCRSGEEAYCKNRLGY---GE-------------------ELDGFFAEYAKVKVTSLVKVPPNVSD  138 (334)
T ss_pred             EEEECCCCCCcCChhhcCCCcccCcccccc---cc-------------------ccCceeeeeeecchhceEECCCCCCH
Confidence            999998899999999999999999875432   21                   11369999999999999999999999


Q ss_pred             hhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336          164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  242 (373)
Q Consensus       164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~  242 (373)
                      .+++.+++.+.+||+++... .+.++++|||+|+ |.+|++++|+|+++|+ +|+++++++++.+.++++ ++.+++.. 
T Consensus       139 ~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~-  214 (334)
T PRK13771        139 EGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS-  214 (334)
T ss_pred             HHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch-
Confidence            99999999999999987655 8899999999998 8999999999999999 788888999999999888 76666554 


Q ss_pred             CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-hhhcccceEEEEeccCCCC
Q 017336          243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKP  321 (373)
Q Consensus       243 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~  321 (373)
                       +  +.+.+++.  +++|+++||+|+ .....++++++++ |+++.+|.......+.... ..+.+++++.+...   ..
T Consensus       215 -~--~~~~v~~~--~~~d~~ld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  284 (334)
T PRK13771        215 -K--FSEEVKKI--GGADIVIETVGT-PTLEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHIS---AT  284 (334)
T ss_pred             -h--HHHHHHhc--CCCcEEEEcCCh-HHHHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHHHhcccEEEEecC---CC
Confidence             2  55556554  379999999998 5788999999997 9999999754322211111 11347778877642   22


Q ss_pred             CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          322 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       322 ~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      .+++.++++++.++.+.  +.+.+.|+++++++|++.+.++.. .|+++++
T Consensus       285 ~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        285 KRDVEEALKLVAEGKIK--PVIGAEVSLSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             HHHHHHHHHHHHcCCCc--ceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence            34688899999999775  347789999999999999987664 5888764

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=4.7e-40  Score=307.56  Aligned_cols=334  Identities=28%  Similarity=0.437  Sum_probs=279.3

Q ss_pred             cchhhhccCCCC-eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCCCC
Q 017336            4 TAAAVAWEAGKP-LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEV   81 (373)
Q Consensus         4 ~~a~~~~~~~~~-~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~   81 (373)
                      |||+++..++++ +.+.+.+.|.+++++|+|++.++++|+.|+....+..+ ...+|.++|+|++|+|+++|++++.+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~   80 (338)
T cd08254           1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV   80 (338)
T ss_pred             CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence            689999999987 68888899999999999999999999999998877654 3456789999999999999999999999


Q ss_pred             CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336           82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  161 (373)
Q Consensus        82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~  161 (373)
                      ||+|++.+..+|+.|.+|+.++.+.|....+.   |+.                   ..|+|++|+.++.+.++++|+++
T Consensus        81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~  138 (338)
T cd08254          81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGMP---GLG-------------------IDGGFAEYIVVPARALVPVPDGV  138 (338)
T ss_pred             CCEEEECCCCCCCCChhhhCcCcccCCCCCcc---ccc-------------------cCCcceeeEEechHHeEECCCCC
Confidence            99999999999999999999999999654433   221                   13699999999999999999999


Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  241 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~  241 (373)
                      ++.+++.++.++.|||+++.....+.++++|||.|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++..
T Consensus       139 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~  217 (338)
T cd08254         139 PFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL  217 (338)
T ss_pred             CHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC
Confidence            9999999999999999998888889999999999889999999999999999 799999999999999999998888766


Q ss_pred             CCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCC
Q 017336          242 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK  320 (373)
Q Consensus       242 ~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  320 (373)
                      +..  +.+.+ ..+.+ ++|+++||+|....+..++++|+++ |+++.+|.......+... ..+.++.++.++...   
T Consensus       218 ~~~--~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~---  289 (338)
T cd08254         218 DDS--PKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDKLTVDLS-DLIARELRIIGSFGG---  289 (338)
T ss_pred             CcC--HHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCCCCccCHH-HHhhCccEEEEeccC---
Confidence            544  55555 44444 8999999998878899999999997 999999875432222221 123377777775432   


Q ss_pred             CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          321 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       321 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      ..+.+..+++++.++.+.+.   .+.+++++++++++.+.+++. .|+++++
T Consensus       290 ~~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         290 TPEDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             CHHHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            23468889999999987654   578999999999999988875 4888764

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=4.7e-40  Score=308.64  Aligned_cols=334  Identities=28%  Similarity=0.410  Sum_probs=275.2

Q ss_pred             cchhhhccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      |||+++..++. +++.+.+.|.| +++||+||+.++++|++|+....|..+. ..|.++|||++|+|+++|++++.+++|
T Consensus         1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~~G   78 (345)
T cd08287           1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVKPG   78 (345)
T ss_pred             CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccCCC
Confidence            68999887665 99999999996 9999999999999999999888775542 457899999999999999999999999


Q ss_pred             CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC--ceEeCCCC
Q 017336           83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL  160 (373)
Q Consensus        83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p~~  160 (373)
                      |+|++.+..+|+.|.+|..++.+.|.+..+.   |.                   ...|+|++|+.++.+  .++++|++
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~v~~~~~~~~~lP~~  136 (345)
T cd08287          79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGFW---GA-------------------FVDGGQGEYVRVPLADGTLVKVPGS  136 (345)
T ss_pred             CEEEeccccCCCCChhhhCcCcccCCCCCcc---cC-------------------CCCCceEEEEEcchhhCceEECCCC
Confidence            9999867788999999999999999864322   21                   123699999999975  99999999


Q ss_pred             CCchhhh-----hcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc
Q 017336          161 APLDKVC-----ILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT  235 (373)
Q Consensus       161 ~~~~~aa-----~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~  235 (373)
                      ++++.+.     .+...+++||+++ ..+.+.++++|+|.|+|.+|++++|+|+++|+..++++++++++.+.++++|++
T Consensus       137 l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~  215 (345)
T cd08287         137 PSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGAT  215 (345)
T ss_pred             CChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCc
Confidence            9872221     2235688899886 467899999999998899999999999999996689998888899999999999


Q ss_pred             eeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-hhhcccceEEE
Q 017336          236 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKG  313 (373)
Q Consensus       236 ~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g  313 (373)
                      .++++....  +.+.+.+.+++ ++|+++|++|++..+..++++++++ |+++.+|.....  ..+.. ..+.+++++.+
T Consensus       216 ~v~~~~~~~--~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~~~~~~~  290 (345)
T cd08287         216 DIVAERGEE--AVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHGG--VELDVRELFFRNVGLAG  290 (345)
T ss_pred             eEecCCccc--HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCCC--CccCHHHHHhcceEEEE
Confidence            999887654  77788887776 8999999999878899999999997 999999876522  22333 33558888877


Q ss_pred             EeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEe
Q 017336          314 TFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS  370 (373)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~  370 (373)
                      ....   ..+.+.++++++.++.+.+.+++++.++++++++|++.+.+.+..|++|+
T Consensus       291 ~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~~~~  344 (345)
T cd08287         291 GPAP---VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAIKVLLR  344 (345)
T ss_pred             ecCC---cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCceEEEeC
Confidence            5321   23468889999999988765567899999999999999888776799885

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=5.4e-40  Score=307.97  Aligned_cols=334  Identities=29%  Similarity=0.496  Sum_probs=269.2

Q ss_pred             hhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccC-CC--CCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            6 AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         6 a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~-~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      |+++..++. +++++.+.|.|.++||+|+|.++++|+.|+..+.+. ..  ...+|.++|+|++|+|+++|++++.|++|
T Consensus         1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G   79 (343)
T cd05285           1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG   79 (343)
T ss_pred             CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence            355666654 899999999999999999999999999998765321 11  12357789999999999999999999999


Q ss_pred             CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336           83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  162 (373)
Q Consensus        83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~  162 (373)
                      |+|++.+..+|+.|++|+.|.+++|.+..+.   +..                  ...|+|++|+.++++.++++|++++
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------------------~~~g~~~~~~~v~~~~~~~lP~~~~  138 (343)
T cd05285          80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA---ATP------------------PVDGTLCRYVNHPADFCHKLPDNVS  138 (343)
T ss_pred             CEEEEccccCCCCChhHhCcCcccCcCcccc---ccc------------------cCCCceeeeEEecHHHcEECcCCCC
Confidence            9999999999999999999999999753221   100                  0136999999999999999999999


Q ss_pred             chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336          163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  242 (373)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~  242 (373)
                      +++++.+ .++.+|++++ +.+.++++++|||.|+|.+|++++|+|+.+|+++|+++.+++++.+.++++|++.++++++
T Consensus       139 ~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~  216 (343)
T cd05285         139 LEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT  216 (343)
T ss_pred             HHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc
Confidence            9998876 4788999885 7899999999999988999999999999999955899989999999999999999888765


Q ss_pred             CCc-cHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCC
Q 017336          243 HDR-PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK  320 (373)
Q Consensus       243 ~~~-~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  320 (373)
                      .+. .+.+.+.+.+++ ++|++|||+|+...+..++++++++ |+++.+|.......+.+. ....+++.+.++...   
T Consensus       217 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~---  291 (343)
T cd05285         217 EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKPEVTLPLS-AASLREIDIRGVFRY---  291 (343)
T ss_pred             ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCCccCHH-HHhhCCcEEEEeccC---
Confidence            441 136667777776 7999999999866889999999997 999999865432222221 122366777665422   


Q ss_pred             CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC-c-eeEEE
Q 017336          321 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-G-LRCII  369 (373)
Q Consensus       321 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~-~-~k~v~  369 (373)
                       .+.+.++++++.++.+.+.+.+.+.|+++++.+|++.+.+++ . +|++|
T Consensus       292 -~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         292 -ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             -hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence             246888999999998765555788999999999999998875 3 68887

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=4e-40  Score=314.57  Aligned_cols=339  Identities=19%  Similarity=0.251  Sum_probs=273.7

Q ss_pred             ccchhhhcc--CCCC---eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCC----------CCCCCC-ccccccce
Q 017336            3 STAAAVAWE--AGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG----------QTPLFP-RIFGHEAA   66 (373)
Q Consensus         3 ~~~a~~~~~--~~~~---~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----------~~~~~p-~i~G~e~~   66 (373)
                      +|||+++..  +++|   +++.+.+.|.|+++||+|++.++++|++|++...+..          .....| .++|||++
T Consensus         7 ~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~   86 (398)
T TIGR01751         7 TMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDAS   86 (398)
T ss_pred             hhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceE
Confidence            599999965  4543   8899999999999999999999999999987654421          111223 37999999


Q ss_pred             EEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeE
Q 017336           67 GVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEY  146 (373)
Q Consensus        67 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~  146 (373)
                      |+|+++|++++.|++||+|++.+..+|++|++|.+++.+.|....+.   |..                  ...|+|+||
T Consensus        87 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~------------------~~~g~~ae~  145 (398)
T TIGR01751        87 GVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIW---GYE------------------TNFGSFAEF  145 (398)
T ss_pred             EEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccc---ccc------------------CCCccceEE
Confidence            99999999999999999999999999999999999999999754322   211                  123699999


Q ss_pred             EEEecCceEeCCCCCCchhhhhcccchhhhhhhhhh--ccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          147 TVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN--VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       147 ~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      +.++++.++++|+++++++++.+.+.+.|||+++..  .+.+.++++|||+|+ |.+|++++|+|+.+|+ +++++++++
T Consensus       146 ~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~~~~  224 (398)
T TIGR01751       146 ALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVVSSP  224 (398)
T ss_pred             EEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEcCCH
Confidence            999999999999999999999999999999998654  477899999999998 9999999999999999 677787889


Q ss_pred             hHHHHHHhcCCceeecCCCCC--------------------ccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcC
Q 017336          224 KRFEEAKKFGVTDFVNTSEHD--------------------RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDG  282 (373)
Q Consensus       224 ~~~~~~~~lg~~~vi~~~~~~--------------------~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~  282 (373)
                      ++.+.++++|++.++++++.+                    ..+.+.+.+.+++ ++|++|||+|. ..+..++++++++
T Consensus       225 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~~~~~l~~~  303 (398)
T TIGR01751       225 EKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPTSVFVCRRG  303 (398)
T ss_pred             HHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHHHHHhhccC
Confidence            999999999999998865421                    1245567777776 89999999997 7788999999997


Q ss_pred             CcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHc
Q 017336          283 WGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVK  361 (373)
Q Consensus       283 ~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~  361 (373)
                       |+++.+|..... ........ +.++.++.++.+..   .++++++++++.++++..  .+++.+++++++++++.+.+
T Consensus       304 -G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~--~~~~~~~l~~~~~a~~~~~~  376 (398)
T TIGR01751       304 -GMVVICGGTTGY-NHDYDNRYLWMRQKRIQGSHFAN---LREAWEANRLVAKGRIDP--TLSKVYPLEEIGQAHQDVHR  376 (398)
T ss_pred             -CEEEEEccccCC-CCCcCHHHHhhcccEEEccccCc---HHHHHHHHHHHHCCCccc--ceeeEEcHHHHHHHHHHHHc
Confidence             999999876532 12222222 23666777765432   234778899999997763  37899999999999999988


Q ss_pred             CCc-eeEEEec
Q 017336          362 GEG-LRCIISM  371 (373)
Q Consensus       362 ~~~-~k~v~~~  371 (373)
                      ++. +|+++++
T Consensus       377 ~~~~gkvvv~~  387 (398)
T TIGR01751       377 NHHQGNVAVLV  387 (398)
T ss_pred             CCCCceEEEEe
Confidence            775 5888876

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=3.8e-40  Score=308.24  Aligned_cols=334  Identities=25%  Similarity=0.418  Sum_probs=272.9

Q ss_pred             chhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCCE
Q 017336            5 AAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDH   84 (373)
Q Consensus         5 ~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~   84 (373)
                      |+++.+..+..+++.+++.|+|+++|++||+.++++|++|+....+......+|.++|||++|+|+++|++++.|++||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~   80 (337)
T cd05283           1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR   80 (337)
T ss_pred             CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence            46677777777999999999999999999999999999999988876655567889999999999999999999999999


Q ss_pred             Ee-ecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336           85 VL-PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  163 (373)
Q Consensus        85 V~-~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~  163 (373)
                      |+ ......|++|++|+++..+.|....+.. .|.         ...|     ....|+|+||+.++++.++++|+++++
T Consensus        81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---------~~~~-----~~~~g~~~~~~~v~~~~~~~lp~~~~~  145 (337)
T cd05283          81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTY-NGK---------YPDG-----TITQGGYADHIVVDERFVFKIPEGLDS  145 (337)
T ss_pred             EEEecCCCCCCCCccccCCchhcCcchhhcc-ccc---------ccCC-----CcCCCcceeEEEechhheEECCCCCCH
Confidence            97 5556689999999999999997644321 010         0000     112469999999999999999999999


Q ss_pred             hhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCC
Q 017336          164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH  243 (373)
Q Consensus       164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~  243 (373)
                      ++++.+++.+.|||+++.. ..+.++++++|.|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++....
T Consensus       146 ~~aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~~  223 (337)
T cd05283         146 AAAAPLLCAGITVYSPLKR-NGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKDP  223 (337)
T ss_pred             HHhhhhhhHHHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcch
Confidence            9999999999999998644 568999999998889999999999999999 89999999999999999999888876543


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCCCCC
Q 017336          244 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPR  322 (373)
Q Consensus       244 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~  322 (373)
                      +  +..    ...+++|++|||+|+......++++++++ |+++.+|......  .++... +.++.++.++....   .
T Consensus       224 ~--~~~----~~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~~---~  291 (337)
T cd05283         224 E--AMK----KAAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEPL--PVPPFPLIFGRKSVAGSLIGG---R  291 (337)
T ss_pred             h--hhh----hccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCCCC--ccCHHHHhcCceEEEEecccC---H
Confidence            2  221    12348999999999855689999999997 9999998764322  233333 34888998877543   2


Q ss_pred             CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336          323 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  370 (373)
Q Consensus       323 ~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~  370 (373)
                      ++++.+++++.++++.+  . .+.|+++++++|++.+.+++. +|+|++
T Consensus       292 ~~~~~~~~~~~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         292 KETQEMLDFAAEHGIKP--W-VEVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             HHHHHHHHHHHhCCCcc--c-eEEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence            46888999999998753  2 478999999999999998885 588764

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-40  Score=308.07  Aligned_cols=310  Identities=19%  Similarity=0.221  Sum_probs=246.5

Q ss_pred             cchhhhccCCC------CeEEEEe---ecCC-CCCCeEEEEEeeeecCcccccccccCCCCCCCCccccc--cceEEEEE
Q 017336            4 TAAAVAWEAGK------PLIIQDV---EVAP-PQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH--EAAGVVES   71 (373)
Q Consensus         4 ~~a~~~~~~~~------~~~~~~~---~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~--e~~G~V~~   71 (373)
                      .|.+++.+..+      .+++++.   +.|. +++||||||+.++++|+.|...+.+......+|.++|+  |++|+|..
T Consensus         9 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G~v~~   88 (348)
T PLN03154          9 NKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFGVSKV   88 (348)
T ss_pred             ceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeEEEEE
Confidence            45566644332      1777764   6663 48999999999999999987654432322345889998  88999999


Q ss_pred             eCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEec
Q 017336           72 VGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS  151 (373)
Q Consensus        72 vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~  151 (373)
                      +|++++.|++||+|+..                                                    |+|+||+.+++
T Consensus        89 vg~~v~~~~~Gd~V~~~----------------------------------------------------~~~aey~~v~~  116 (348)
T PLN03154         89 VDSDDPNFKPGDLISGI----------------------------------------------------TGWEEYSLIRS  116 (348)
T ss_pred             EecCCCCCCCCCEEEec----------------------------------------------------CCcEEEEEEec
Confidence            99999999999999832                                                    48999999987


Q ss_pred             Cc--eEe--CCCCCCch-hhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH
Q 017336          152 GC--VAK--INPLAPLD-KVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR  225 (373)
Q Consensus       152 ~~--~~~--~p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~  225 (373)
                      +.  +.+  +|++++++ ++++++++++|||+++.+.+.++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++
T Consensus       117 ~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k  195 (348)
T PLN03154        117 SDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQK  195 (348)
T ss_pred             cccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHH
Confidence            53  544  59999986 688899999999999878889999999999998 9999999999999999 79999899999


Q ss_pred             HHHHH-hcCCceeecCCCC-CccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCc-ee---e
Q 017336          226 FEEAK-KFGVTDFVNTSEH-DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA-VF---M  299 (373)
Q Consensus       226 ~~~~~-~lg~~~vi~~~~~-~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~-~~---~  299 (373)
                      ++.++ ++|++.++++.+. +  +.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|...... ..   .
T Consensus       196 ~~~~~~~lGa~~vi~~~~~~~--~~~~i~~~~~~gvD~v~d~vG~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~  271 (348)
T PLN03154        196 VDLLKNKLGFDEAFNYKEEPD--LDAALKRYFPEGIDIYFDNVGG-DMLDAALLNMKIH-GRIAVCGMVSLNSLSASQGI  271 (348)
T ss_pred             HHHHHHhcCCCEEEECCCccc--HHHHHHHHCCCCcEEEEECCCH-HHHHHHHHHhccC-CEEEEECccccCCCCCCCCc
Confidence            99987 7999999987643 3  7777777776689999999998 6889999999997 9999999764321 10   0


Q ss_pred             ccch-hhcccceEEEEeccCCC--CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336          300 TKPI-NVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       300 ~~~~-~~~~~~~i~g~~~~~~~--~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                      .... .+.+++++.|+..+.+.  ..+.++++++++.+|++.+.  +.+.|+|+++++|++.+.+++. +|+||++.
T Consensus       272 ~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~--~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~  346 (348)
T PLN03154        272 HNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYI--EDMSEGLESAPAALVGLFSGKNVGKQVIRVA  346 (348)
T ss_pred             ccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCc--eecccCHHHHHHHHHHHHcCCCCceEEEEec
Confidence            1222 23488899988754321  12357789999999988643  6778999999999999999885 59999875

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=1.6e-39  Score=304.18  Aligned_cols=332  Identities=25%  Similarity=0.399  Sum_probs=270.3

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   83 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   83 (373)
                      |||+++.+++....+++.+.|.++++||+|||.++++|++|+....|..+. ..|.++|||++|+|+++|++++.|++||
T Consensus         1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd   79 (338)
T PRK09422          1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD   79 (338)
T ss_pred             CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence            789999988774448999999999999999999999999999888775433 2367899999999999999999999999


Q ss_pred             EEeecC-cCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336           84 HVLPVF-TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  162 (373)
Q Consensus        84 ~V~~~~-~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~  162 (373)
                      +|++.+ ..+|+.|.+|..+..+.|.+....   |+.                   ..|+|+||+.++.++++++|++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~v~~~~~~~~p~~~~  137 (338)
T PRK09422         80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKNA---GYT-------------------VDGGMAEQCIVTADYAVKVPEGLD  137 (338)
T ss_pred             EEEEccCCCCCCCChhhcCCCcccCCCcccc---Ccc-------------------ccCcceeEEEEchHHeEeCCCCCC
Confidence            998754 568999999999999999865432   211                   136999999999999999999999


Q ss_pred             chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHH-cCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336          163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  241 (373)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~-~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~  241 (373)
                      +++++.++..+.|||+++ ..+.++++++|||+|+|.+|++++++|+. +|+ +|+++++++++++.++++|++.++++.
T Consensus       138 ~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~  215 (338)
T PRK09422        138 PAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSK  215 (338)
T ss_pred             HHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEeccc
Confidence            999999999999999986 77889999999999999999999999998 499 799999999999999999998888875


Q ss_pred             C-CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCC
Q 017336          242 E-HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNY  319 (373)
Q Consensus       242 ~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~  319 (373)
                      . .+  +.+.+++.++ ++|+++++.++.+.+..++++++++ |+++.+|......  ...... ..+..++.++.... 
T Consensus       216 ~~~~--~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~-  288 (338)
T PRK09422        216 RVED--VAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPESM--DLSIPRLVLDGIEVVGSLVGT-  288 (338)
T ss_pred             cccc--HHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCCCc--eecHHHHhhcCcEEEEecCCC-
Confidence            3 33  6667777666 6886555555668899999999997 9999998654222  222222 23677776654322 


Q ss_pred             CCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336          320 KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       320 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                        .+.++++++++.++.+..  .+ ..++++++++|++.+.+++. +|+++++.
T Consensus       289 --~~~~~~~~~l~~~g~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~~  337 (338)
T PRK09422        289 --RQDLEEAFQFGAEGKVVP--KV-QLRPLEDINDIFDEMEQGKIQGRMVIDFT  337 (338)
T ss_pred             --HHHHHHHHHHHHhCCCCc--cE-EEEcHHHHHHHHHHHHcCCccceEEEecC
Confidence              246888999999997753  24 46899999999999988775 48888653

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=3.6e-39  Score=302.03  Aligned_cols=333  Identities=30%  Similarity=0.436  Sum_probs=270.3

Q ss_pred             hccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCC---CCCCCCccccccceEEEEEeCCCCCCCCCCCEE
Q 017336            9 AWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV   85 (373)
Q Consensus         9 ~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V   85 (373)
                      -+.++.++++++.+.|.|+++||+||+.++++|+.|+..+.+..   ....+|.++|+|++|+|+++|++++.|++||+|
T Consensus         4 ~~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V   83 (340)
T TIGR00692         4 KTKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYV   83 (340)
T ss_pred             cccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEE
Confidence            45677789999999999999999999999999999988765431   123457789999999999999999999999999


Q ss_pred             eecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchh
Q 017336           86 LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK  165 (373)
Q Consensus        86 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~  165 (373)
                      +..+++.|+.|..|..+.++.|...++.   |..                   ..|+|++|+.++++.++++|++++.+.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~  141 (340)
T TIGR00692        84 SVETHIVCGKCYACRRGQYHVCQNTKIF---GVD-------------------TDGCFAEYAVVPAQNIWKNPKSIPPEY  141 (340)
T ss_pred             EECCcCCCCCChhhhCcChhhCcCcceE---eec-------------------CCCcceeEEEeehHHcEECcCCCChHh
Confidence            9999999999999999999999886433   211                   236999999999999999999999855


Q ss_pred             hhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCc
Q 017336          166 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR  245 (373)
Q Consensus       166 aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~  245 (373)
                      + +++..+.+|++++  .....++++|+|.|+|.+|++++|+|+.+|++.|+++++++++.+.++++|++.++++...+ 
T Consensus       142 a-~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~-  217 (340)
T TIGR00692       142 A-TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKED-  217 (340)
T ss_pred             h-hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccC-
Confidence            4 5667888888875  34577899999988899999999999999995588888889999999999998888776554 


Q ss_pred             cHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCCCCC
Q 017336          246 PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTD  324 (373)
Q Consensus       246 ~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  324 (373)
                       +.+.+.+.+++ ++|++||++|+...+...+++|+++ |+++.+|.......+.+....+.+++++.+...  ....+.
T Consensus       218 -~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  293 (340)
T TIGR00692       218 -VVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITG--RHMFET  293 (340)
T ss_pred             -HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCCCcccchhhhhhhcceEEEEEec--CCchhh
Confidence             77888777766 8999999998767889999999997 999999875422222222122336667766441  122345


Q ss_pred             HHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336          325 LPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  371 (373)
Q Consensus       325 ~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~  371 (373)
                      +.+++++++++++.+.+++.+.++++++.++++.+.+++.+|+++++
T Consensus       294 ~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~  340 (340)
T TIGR00692       294 WYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL  340 (340)
T ss_pred             HHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            78899999999887655578999999999999999877667888864

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=3.6e-39  Score=302.38  Aligned_cols=336  Identities=29%  Similarity=0.479  Sum_probs=274.2

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   83 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   83 (373)
                      |||+++.+.+. +++++.++|+++++||+|++.++++|+.|+....+.+ ....|.++|+|++|+|+++|++++.|++||
T Consensus         1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~-~~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd   78 (343)
T cd08236           1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG-AYHPPLVLGHEFSGTVEEVGSGVDDLAVGD   78 (343)
T ss_pred             CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCC-CCCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence            68999988765 8999999999999999999999999999998877754 234578899999999999999999999999


Q ss_pred             EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336           84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  163 (373)
Q Consensus        84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~  163 (373)
                      +|+..+...|+.|++|..+.+..|+.....   |.                   ...|+|++|+.++++.++++|+++++
T Consensus        79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~~~~~~~~~lP~~~~~  136 (343)
T cd08236          79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDYI---GS-------------------RRDGAFAEYVSVPARNLIKIPDHVDY  136 (343)
T ss_pred             EEEEcCCCCCCCChhHHCcChhhCCCcceE---ec-------------------ccCCcccceEEechHHeEECcCCCCH
Confidence            999999999999999999999999864322   11                   12369999999999999999999999


Q ss_pred             hhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCC
Q 017336          164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH  243 (373)
Q Consensus       164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~  243 (373)
                      ++++.+ ..+++||.++. ...+.++++|||+|+|.+|++++|+|+.+|+++|+++++++++.+.++++|++.++++...
T Consensus       137 ~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~  214 (343)
T cd08236         137 EEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEE  214 (343)
T ss_pred             HHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCccc
Confidence            998887 57889999875 7789999999999889999999999999999559999888999999999999888877653


Q ss_pred             CccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc--hhhcccceEEEEeccCCC
Q 017336          244 DRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP--INVLNERTLKGTFFGNYK  320 (373)
Q Consensus       244 ~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~--~~~~~~~~i~g~~~~~~~  320 (373)
                      .   .+.+....++ ++|++|||+|+...+..++++|+++ |+++.+|.......+....  ..+.++.++.++......
T Consensus       215 ~---~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (343)
T cd08236         215 D---VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSA  290 (343)
T ss_pred             c---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecccc
Confidence            2   4556666666 7999999998867889999999997 9999998664322222111  112477888777653221


Q ss_pred             --CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHc-CCc-eeEEE
Q 017336          321 --PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVK-GEG-LRCII  369 (373)
Q Consensus       321 --~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~-~~~-~k~v~  369 (373)
                        ..+.+++++++++++.+.+.+.+.+.+++++++++++.+.+ +.. .|+++
T Consensus       291 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         291 PFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             ccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence              13468888999999987644446789999999999999988 443 47654

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=2.4e-40  Score=301.41  Aligned_cols=269  Identities=27%  Similarity=0.431  Sum_probs=219.8

Q ss_pred             cccccceEEEEEeCCCCC------CCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCc
Q 017336           60 IFGHEAAGVVESVGEGVS------DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEP  133 (373)
Q Consensus        60 i~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~  133 (373)
                      ++|||++|+|+++|++|+      .|++||||++.+..+|+.|.+|+.|+++.|++....   |+...++  +       
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~~~~~--~-------   68 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY---GHEALDS--G-------   68 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhc---CcccccC--C-------
Confidence            589999999999999999      899999999999999999999999999999875543   3210000  0       


Q ss_pred             cccccCCcceeeEEEEecC-ceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcC
Q 017336          134 VNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG  212 (373)
Q Consensus       134 ~~~~~~~G~~a~~~~v~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g  212 (373)
                         ....|+|+||+.++++ .++++|+++++++++.+++.+.|||+++. .....++++|||+|+|++|++++|+|+.+|
T Consensus        69 ---~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G  144 (280)
T TIGR03366        69 ---WPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGDLKGRRVLVVGAGMLGLTAAAAAAAAG  144 (280)
T ss_pred             ---ccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence               0123699999999997 79999999999999999999999999864 455669999999999999999999999999


Q ss_pred             CcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          213 ASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       213 ~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      +++|++++++++|+++++++|++.++++..    ..+.+.+.+.+ ++|++||++|++..+..++++++++ |+++.+|.
T Consensus       145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~  219 (280)
T TIGR03366       145 AARVVAADPSPDRRELALSFGATALAEPEV----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGS  219 (280)
T ss_pred             CCEEEEECCCHHHHHHHHHcCCcEecCchh----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEecc
Confidence            966999989999999999999998887643    23455666665 8999999999878899999999997 99999997


Q ss_pred             CCCCceeeccchhh-cccceEEEEeccCCCCCCCHHHHHHHHHcC--CCCCCCceeeeeccccH
Q 017336          292 PSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMNK--QLELEKFITHRIPFSEI  352 (373)
Q Consensus       292 ~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~l~~~  352 (373)
                      ........++...+ .+++++.|+..+.   .+++.++++++.++  ++++.++++++|||+++
T Consensus       220 ~~~~~~~~i~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       220 VFPGGPVALDPEQVVRRWLTIRGVHNYE---PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             CCCCCceeeCHHHHHhCCcEEEecCCCC---HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            54222333344334 4899999876432   34689999999984  67777889999999874

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.6e-39  Score=299.49  Aligned_cols=329  Identities=28%  Similarity=0.474  Sum_probs=270.3

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   83 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   83 (373)
                      |||+++..++.++.+++.|.|.+.++||+|+++++++|++|+....|..+....|.++|+|++|+|+++|++++.+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd   80 (332)
T cd08259           1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD   80 (332)
T ss_pred             CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence            68999887666699999999999999999999999999999999888666566788999999999999999999999999


Q ss_pred             EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336           84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  163 (373)
Q Consensus        84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~  163 (373)
                      +|++.+..+|+.|++|..+..+.|.+...   .|..                   ..|+|++|++++.+.++++|+++++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------------~~g~~~~~~~v~~~~~~~ip~~~~~  138 (332)
T cd08259          81 RVILYYYIPCGKCEYCLSGEENLCRNRAE---YGEE-------------------VDGGFAEYVKVPERSLVKLPDNVSD  138 (332)
T ss_pred             EEEECCCCCCcCChhhhCCCcccCCCccc---cccc-------------------cCCeeeeEEEechhheEECCCCCCH
Confidence            99999999999999999999999987521   1211                   2469999999999999999999999


Q ss_pred             hhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336          164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  242 (373)
Q Consensus       164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~  242 (373)
                      ++++.+++++.+||+++.. +.+.+++++||+|+ |.+|++++++++..|+ +|+++.+++++.+.+++++.+.+++..+
T Consensus       139 ~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (332)
T cd08259         139 ESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSK  216 (332)
T ss_pred             HHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecHH
Confidence            9999999999999998766 88999999999987 9999999999999999 7888888888999998899877765433


Q ss_pred             CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCce-eeccchhhcccceEEEEeccCCCC
Q 017336          243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV-FMTKPINVLNERTLKGTFFGNYKP  321 (373)
Q Consensus       243 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~  321 (373)
                          +.+.+.+..  ++|++++++|. .....++++++++ |+++.+|....... +.... ...++..+.++..   ..
T Consensus       217 ----~~~~~~~~~--~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~  284 (332)
T cd08259         217 ----FSEDVKKLG--GADVVIELVGS-PTIEESLRSLNKG-GRLVLIGNVTPDPAPLRPGL-LILKEIRIIGSIS---AT  284 (332)
T ss_pred             ----HHHHHHhcc--CCCEEEECCCh-HHHHHHHHHhhcC-CEEEEEcCCCCCCcCCCHHH-HHhCCcEEEEecC---CC
Confidence                444454443  79999999998 5688899999997 99999987542221 11111 1235666666531   12


Q ss_pred             CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336          322 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  370 (373)
Q Consensus       322 ~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~  370 (373)
                      .++++++++++.++.+.+  ++.+.|+++++++|++.+.+++. .|++++
T Consensus       285 ~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         285 KADVEEALKLVKEGKIKP--VIDRVVSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             HHHHHHHHHHHHcCCCcc--ceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence            345788999999997653  47789999999999999988775 477763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=3e-39  Score=300.39  Aligned_cols=308  Identities=22%  Similarity=0.294  Sum_probs=255.9

Q ss_pred             cchhhhccCCCC---eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCC
Q 017336            4 TAAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDL   79 (373)
Q Consensus         4 ~~a~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~   79 (373)
                      |||+++.+++.+   +++.+++.|.++++||+|||.++++|++|+..+.|.++ ...+|.++|||++|+|+++|++++.+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   80 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL   80 (324)
T ss_pred             CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence            689998877653   78899999999999999999999999999998877654 34568899999999999999999999


Q ss_pred             CCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC
Q 017336           80 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP  159 (373)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~  159 (373)
                      ++||+|++.+.                                                 .|+|++|+.+++..++++|+
T Consensus        81 ~~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~ip~  111 (324)
T cd08292          81 QVGQRVAVAPV-------------------------------------------------HGTWAEYFVAPADGLVPLPD  111 (324)
T ss_pred             CCCCEEEeccC-------------------------------------------------CCcceeEEEEchHHeEECCC
Confidence            99999985420                                                 25899999999999999999


Q ss_pred             CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee
Q 017336          160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  238 (373)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi  238 (373)
                      ++++++++.+++.+.+||+++ ..+.+.++++|||+|+ |.+|++++|+|+++|+ +++++.+++++.+.++++|++.++
T Consensus       112 ~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~  189 (324)
T cd08292         112 GISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVV  189 (324)
T ss_pred             CCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEE
Confidence            999999999998899999975 5588999999999987 9999999999999999 788888888888888889998888


Q ss_pred             cCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccch-hhcccceEEEEec
Q 017336          239 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFF  316 (373)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~  316 (373)
                      ++.+.+  +.+.+.+.+++ ++|++||++|+ .....++++++++ |+++.+|... .....+... .+.++.++.++..
T Consensus       190 ~~~~~~--~~~~i~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~  264 (324)
T cd08292         190 STEQPG--WQDKVREAAGGAPISVALDSVGG-KLAGELLSLLGEG-GTLVSFGSMS-GEPMQISSGDLIFKQATVRGFWG  264 (324)
T ss_pred             cCCCch--HHHHHHHHhCCCCCcEEEECCCC-hhHHHHHHhhcCC-cEEEEEecCC-CCCCcCCHHHHhhCCCEEEEEEc
Confidence            776654  78888888887 89999999998 5778999999997 9999998753 222222222 2348888888765


Q ss_pred             cCCC-------CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 017336          317 GNYK-------PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII  369 (373)
Q Consensus       317 ~~~~-------~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~  369 (373)
                      ....       ..+.+.++++++.++.+.+.  +.+.|+++++.+|++.+.++.. .|+++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvv  323 (324)
T cd08292         265 GRWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPGRAGKVLL  323 (324)
T ss_pred             HHhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCCCCceEEe
Confidence            4321       11357889999999988653  4788999999999999887654 47775

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=7e-39  Score=299.97  Aligned_cols=332  Identities=26%  Similarity=0.409  Sum_probs=262.2

Q ss_pred             hccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccc-cCCC--CCCCCccccccceEEEEEeCCCCCCCCCCCEE
Q 017336            9 AWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-SKGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV   85 (373)
Q Consensus         9 ~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-g~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V   85 (373)
                      +++.+. +++++.++|.++++||+||+.++++|++|+.... +..+  ...+|.++|+|++|+|+++|++++.|++||+|
T Consensus         3 ~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V   81 (339)
T cd08232           3 IHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRV   81 (339)
T ss_pred             eccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEE
Confidence            344544 8999999999999999999999999999987653 3221  12457889999999999999999999999999


Q ss_pred             eecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchh
Q 017336           86 LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK  165 (373)
Q Consensus        86 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~  165 (373)
                      ++.+.++|++|.+|..|+++.|.+..+.   |....+              ....|+|++|+.++++.++++|+++++++
T Consensus        82 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~--------------~~~~g~~~~~v~v~~~~~~~iP~~~~~~~  144 (339)
T cd08232          82 AVNPSRPCGTCDYCRAGRPNLCLNMRFL---GSAMRF--------------PHVQGGFREYLVVDASQCVPLPDGLSLRR  144 (339)
T ss_pred             EEccCCcCCCChHHhCcCcccCccccce---eecccc--------------CCCCCceeeEEEechHHeEECcCCCCHHH
Confidence            9999999999999999999999874322   211000              00136999999999999999999999998


Q ss_pred             hhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCc
Q 017336          166 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR  245 (373)
Q Consensus       166 aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~  245 (373)
                      ++. ..++++||+++...... ++++|||.|+|.+|++++|+|+++|+.+|+++++++++.+.++++|++.+++++..+ 
T Consensus       145 aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~-  221 (339)
T cd08232         145 AAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDP-  221 (339)
T ss_pred             hhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchh-
Confidence            876 56888999987665556 899999998899999999999999986788998889999999999998888776543 


Q ss_pred             cHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCCCCCCC
Q 017336          246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTD  324 (373)
Q Consensus       246 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~  324 (373)
                       +.+ +. ...+++|+++|+.|+...+..++++|+++ |+++.+|.....  ....... +.+++++.+...    ..+.
T Consensus       222 -~~~-~~-~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~  291 (339)
T cd08232         222 -LAA-YA-ADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLGGP--VPLPLNALVAKELDLRGSFR----FDDE  291 (339)
T ss_pred             -hhh-hh-ccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCC--ccCcHHHHhhcceEEEEEec----CHHH
Confidence             211 11 11226999999999767789999999997 999999864422  2222222 347777776642    2346


Q ss_pred             HHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC-ceeEEEec
Q 017336          325 LPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-GLRCIISM  371 (373)
Q Consensus       325 ~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~-~~k~v~~~  371 (373)
                      +.++++++.++.+.+.+.+.++|+++++++|++.+.+++ .+|+++++
T Consensus       292 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         292 FAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             HHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence            888999999998876666789999999999999998766 45888764

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.3e-38  Score=298.37  Aligned_cols=334  Identities=30%  Similarity=0.483  Sum_probs=277.0

Q ss_pred             cchhhhccCC-CCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCCC
Q 017336            4 TAAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV   81 (373)
Q Consensus         4 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~   81 (373)
                      |||+++..++ ..+++.+++.|.|.++|++||+.++++|++|+....+..+. ...|.++|+|++|+|+++|++++.+++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~   80 (341)
T cd08297           1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV   80 (341)
T ss_pred             CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence            7899988776 34999999999999999999999999999999887775532 344678999999999999999999999


Q ss_pred             CCEEeecC-cCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           82 GDHVLPVF-TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        82 Gd~V~~~~-~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      ||+|+..+ ..+|+.|.+|+.++.+.|.+....   |+.                   ..|+|++|+.++++.++++|++
T Consensus        81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~s~~~~~~~~~~~lp~~  138 (341)
T cd08297          81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS---GYT-------------------VDGTFAEYAIADARYVTPIPDG  138 (341)
T ss_pred             CCEEEEecCCCCCCCCccccCCCcccCCCcccc---ccc-------------------cCCcceeEEEeccccEEECCCC
Confidence            99999765 578999999999999999764433   211                   1358999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      +++.+++.++..+.|||+++.. ..+.++++|||+|+ +.+|++++++|+++|+ +|+++.+++++.+.++++|++.+++
T Consensus       139 ~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~  216 (341)
T cd08297         139 LSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVD  216 (341)
T ss_pred             CCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEc
Confidence            9999999999999999998755 58999999999987 6799999999999999 8999999999999999999998888


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEecc
Q 017336          240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG  317 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~  317 (373)
                      +...+  +.+.+.+.+++ ++|+++|+.++......++++++++ |+++.+|.... ....+....+ .++.++.+....
T Consensus       217 ~~~~~--~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~  292 (341)
T cd08297         217 FKKSD--DVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPG-GFIPLDPFDLVLRGITIVGSLVG  292 (341)
T ss_pred             CCCcc--HHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCCC-CCCCCCHHHHHhcccEEEEeccC
Confidence            76654  77778887765 8999999888778899999999997 99999986542 2223332322 377888775432


Q ss_pred             CCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          318 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      .   .+.+++++++++++.+.+   ....|++++++++++.+.++.. .|++++|
T Consensus       293 ~---~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         293 T---RQDLQEALEFAARGKVKP---HIQVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             C---HHHHHHHHHHHHcCCCcc---eeEEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            1   246888999999998753   2367999999999999988774 5888875

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=3.4e-39  Score=301.94  Aligned_cols=310  Identities=20%  Similarity=0.244  Sum_probs=245.2

Q ss_pred             cchhhhccCCC-CeEEEEeec----CCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccc--eEEEEEeCCC
Q 017336            4 TAAAVAWEAGK-PLIIQDVEV----APPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEA--AGVVESVGEG   75 (373)
Q Consensus         4 ~~a~~~~~~~~-~~~~~~~~~----p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~--~G~V~~vG~~   75 (373)
                      +|++....++. .|++++.++    |+|+++||||||+|++||+.|++...|.+.. ..+|.++|+++  .|++..+|+.
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~   87 (338)
T cd08295           8 LKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSG   87 (338)
T ss_pred             EecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecC
Confidence            45555322222 388999988    8899999999999999999999988875432 35678889754  4566668888


Q ss_pred             CCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEec-Cce
Q 017336           76 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS-GCV  154 (373)
Q Consensus        76 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~-~~~  154 (373)
                      ++.|++||+|+..                                                    |+|+||+++++ ..+
T Consensus        88 v~~~~vGd~V~~~----------------------------------------------------g~~aey~~v~~~~~~  115 (338)
T cd08295          88 NPDFKVGDLVWGF----------------------------------------------------TGWEEYSLIPRGQDL  115 (338)
T ss_pred             CCCCCCCCEEEec----------------------------------------------------CCceeEEEecchhce
Confidence            8899999999833                                                    48999999999 799


Q ss_pred             EeCC-CCCCch-hhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh
Q 017336          155 AKIN-PLAPLD-KVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  231 (373)
Q Consensus       155 ~~~p-~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~  231 (373)
                      +++| +.+++. ++++++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.+++++.+.+++
T Consensus       116 ~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~  194 (338)
T cd08295         116 RKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKN  194 (338)
T ss_pred             eecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Confidence            9995 678886 788899999999999878889999999999997 9999999999999999 79998899999999998


Q ss_pred             -cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCcee----eccch-hh
Q 017336          232 -FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF----MTKPI-NV  305 (373)
Q Consensus       232 -lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~----~~~~~-~~  305 (373)
                       +|++.++++.+.. ++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|........    ..... .+
T Consensus       195 ~lGa~~vi~~~~~~-~~~~~i~~~~~~gvd~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~  271 (338)
T cd08295         195 KLGFDDAFNYKEEP-DLDAALKRYFPNGIDIYFDNVGG-KMLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLNII  271 (338)
T ss_pred             hcCCceeEEcCCcc-cHHHHHHHhCCCCcEEEEECCCH-HHHHHHHHHhccC-cEEEEecccccCCCCCCCCccCHHHHh
Confidence             9999998865421 27777777765689999999998 7889999999997 999999865422110    01112 23


Q ss_pred             cccceEEEEeccCCCC--CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          306 LNERTLKGTFFGNYKP--RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       306 ~~~~~i~g~~~~~~~~--~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      .+++++.++....+..  .+.++++++++.++++.+.  +...|+++++++|++.+.+++. +|+++++
T Consensus       272 ~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         272 YKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             hccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence            3777888765433221  1246778899999988654  4567999999999999988775 5988864

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=2.6e-39  Score=276.82  Aligned_cols=313  Identities=21%  Similarity=0.321  Sum_probs=253.5

Q ss_pred             cchhhhccCCCC---eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCC
Q 017336            4 TAAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDL   79 (373)
Q Consensus         4 ~~a~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~   79 (373)
                      .|+++|.+.+.|   +++.+.++|+....+|+|+.+|+.|||+|+-.++|.|+- +++|.+-|.|++|+|+.+|+++++|
T Consensus        20 ~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~vkgf   99 (354)
T KOG0025|consen   20 SKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSNVKGF   99 (354)
T ss_pred             cceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCCcCcc
Confidence            578999999998   788999999988888999999999999999999999984 6789999999999999999999999


Q ss_pred             CCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC
Q 017336           80 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP  159 (373)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~  159 (373)
                      ++||+|+...                                                .+.|+|++|...+++.++++++
T Consensus       100 k~Gd~VIp~~------------------------------------------------a~lGtW~t~~v~~e~~Li~vd~  131 (354)
T KOG0025|consen  100 KPGDWVIPLS------------------------------------------------ANLGTWRTEAVFSESDLIKVDK  131 (354)
T ss_pred             CCCCeEeecC------------------------------------------------CCCccceeeEeecccceEEcCC
Confidence            9999999652                                                1358999999999999999999


Q ss_pred             CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH----HHHHHhcCC
Q 017336          160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR----FEEAKKFGV  234 (373)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~----~~~~~~lg~  234 (373)
                      .++++.||++..+.+|||..|.+...+.+|++|+-.|+ +++|.+.+|+|+++|++.+-++ |+...    .+.++.+|+
T Consensus       132 ~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvV-RdR~~ieel~~~Lk~lGA  210 (354)
T KOG0025|consen  132 DIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVV-RDRPNIEELKKQLKSLGA  210 (354)
T ss_pred             cCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEe-ecCccHHHHHHHHHHcCC
Confidence            99999999999999999999989999999999999998 9999999999999999555444 65433    344567999


Q ss_pred             ceeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccch-hhcccceEE
Q 017336          235 TDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLK  312 (373)
Q Consensus       235 ~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~  312 (373)
                      ++|+..++...  .+..+..... ++.+.|||+|+ .......+.|..+ |+.+.+|..+... ...+.. .++|+++++
T Consensus       211 ~~ViTeeel~~--~~~~k~~~~~~~prLalNcVGG-ksa~~iar~L~~G-gtmvTYGGMSkqP-v~~~ts~lIFKdl~~r  285 (354)
T KOG0025|consen  211 TEVITEEELRD--RKMKKFKGDNPRPRLALNCVGG-KSATEIARYLERG-GTMVTYGGMSKQP-VTVPTSLLIFKDLKLR  285 (354)
T ss_pred             ceEecHHHhcc--hhhhhhhccCCCceEEEeccCc-hhHHHHHHHHhcC-ceEEEecCccCCC-cccccchheeccceee
Confidence            99986544221  1111121222 78999999999 5667788999997 9999999887543 333333 355999999


Q ss_pred             EEeccCCCCCC--------CHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc--eeEEEecC
Q 017336          313 GTFFGNYKPRT--------DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG--LRCIISME  372 (373)
Q Consensus       313 g~~~~~~~~~~--------~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~--~k~v~~~~  372 (373)
                      |+++..+...+        ...++..++++|++...  -....+|++...|++...+...  +|.++.++
T Consensus       286 GfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~--~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~e  353 (354)
T KOG0025|consen  286 GFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAP--NCEKVPLADHKTALDAALSKFGKSGKQIIVLE  353 (354)
T ss_pred             eeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccc--cceeeechhhhHHHHHHHHHhccCCceEEEec
Confidence            99987765442        25678889999987644  3567799999999997665443  37776654

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=3.1e-38  Score=294.92  Aligned_cols=332  Identities=31%  Similarity=0.489  Sum_probs=271.9

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   83 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   83 (373)
                      |||+++.+++. +++.+.+.|+++++||+||+.++++|+.|+....|..+. .+|.++|+|++|+|+++|++++.+++||
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd   78 (334)
T cd08234           1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGD   78 (334)
T ss_pred             CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCC
Confidence            68999888775 999999999999999999999999999999988876543 3788999999999999999999999999


Q ss_pred             EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336           84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  163 (373)
Q Consensus        84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~  163 (373)
                      +|++.+...|+.|.+|..++.+.|......   |.                   ...|+|++|+.+++++++++|+++++
T Consensus        79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~v~~~~~~~lP~~~~~  136 (334)
T cd08234          79 RVAVDPNIYCGECFYCRRGRPNLCENLTAV---GV-------------------TRNGGFAEYVVVPAKQVYKIPDNLSF  136 (334)
T ss_pred             EEEEcCCcCCCCCccccCcChhhCCCccee---cc-------------------CCCCcceeEEEecHHHcEECcCCCCH
Confidence            999999999999999999999888754210   10                   01369999999999999999999999


Q ss_pred             hhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCC
Q 017336          164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH  243 (373)
Q Consensus       164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~  243 (373)
                      .+++.+ ..+.++++++ +.+.+.++++|||+|+|.+|.+++++|+.+|++.|+++++++++.+.++++|++.+++....
T Consensus       137 ~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~  214 (334)
T cd08234         137 EEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSRE  214 (334)
T ss_pred             HHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCC
Confidence            988766 6788999886 77899999999999889999999999999999558888899999999999999888776654


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc-ccceEEEEeccCCCCC
Q 017336          244 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPR  322 (373)
Q Consensus       244 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~  322 (373)
                      +  +... +...++++|++||++|+......++++|+++ |+++.+|..............+. +++++.+....    .
T Consensus       215 ~--~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~  286 (334)
T cd08234         215 D--PEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----P  286 (334)
T ss_pred             C--HHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----H
Confidence            4  4444 3333338999999998767889999999997 99999987653222333333322 67777776432    2


Q ss_pred             CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEE
Q 017336          323 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII  369 (373)
Q Consensus       323 ~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~  369 (373)
                      +.+++++++++++.+.+.+++++.|+++++++|++.+.+....|+++
T Consensus       287 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi  333 (334)
T cd08234         287 YTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRSGGALKVVV  333 (334)
T ss_pred             HHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhcCCceEEEe
Confidence            35888999999998876555788999999999999998833457775

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=2e-38  Score=297.58  Aligned_cols=299  Identities=17%  Similarity=0.216  Sum_probs=230.5

Q ss_pred             eEEEEeecCCCC-CCeEEEEEeeeecCcccccccc---cCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEeecCcC
Q 017336           16 LIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWE---SKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG   91 (373)
Q Consensus        16 ~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~---g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~   91 (373)
                      +++++.+.|+|. ++||||||.|+|||+.|.....   +.....++|.++|||++|+|+++|++++.|++||+|+..   
T Consensus        23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~---   99 (345)
T cd08293          23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF---   99 (345)
T ss_pred             eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec---
Confidence            788999999874 9999999999999999853322   111123567899999999999999999999999999843   


Q ss_pred             CCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchh----hh
Q 017336           92 ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK----VC  167 (373)
Q Consensus        92 ~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~----aa  167 (373)
                                                                      .++|+||++++++.++++|+++++++    ++
T Consensus       100 ------------------------------------------------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a  131 (345)
T cd08293         100 ------------------------------------------------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLG  131 (345)
T ss_pred             ------------------------------------------------CCCceeEEEecHHHeEEcCccccccchhHHhh
Confidence                                                            03799999999999999999864432    44


Q ss_pred             hcccchhhhhhhhhhccCCCCC--CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCC
Q 017336          168 ILSCGVSTGLGATLNVAKPERG--SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEH  243 (373)
Q Consensus       168 ~~~~~~~ta~~~l~~~~~~~~~--~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~  243 (373)
                      .++.+++|||+++.+.++++++  ++|||+|+ |++|++++|+|+.+|+.+|+++++++++.+.+++ +|++.++++.+.
T Consensus       132 ~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~  211 (345)
T cd08293         132 AVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTD  211 (345)
T ss_pred             hcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCC
Confidence            5677899999998777888876  99999997 9999999999999998669999899999998876 999999988765


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCC---cee--eccc--hhhc--ccceEEEE
Q 017336          244 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD---AVF--MTKP--INVL--NERTLKGT  314 (373)
Q Consensus       244 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~---~~~--~~~~--~~~~--~~~~i~g~  314 (373)
                      +  +.+.+++.+++++|++||++|+ ..+..++++|+++ |+++.+|.....   ...  ....  ..+.  +++++.+.
T Consensus       212 ~--~~~~i~~~~~~gvd~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (345)
T cd08293         212 N--VAERLRELCPEGVDVYFDNVGG-EISDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERF  287 (345)
T ss_pred             C--HHHHHHHHCCCCceEEEECCCc-HHHHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEE
Confidence            5  8888888776689999999998 5678999999997 999999853211   111  0100  1111  23333332


Q ss_pred             eccCCCC--CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          315 FFGNYKP--RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       315 ~~~~~~~--~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      ....+..  .+.++++++++.++++.+.  ....++++++++|++.+.+++. +|+++++
T Consensus       288 ~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         288 LVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             EeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence            2111111  1236677889999988654  4456799999999999988774 5998864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.4e-38  Score=296.25  Aligned_cols=318  Identities=25%  Similarity=0.329  Sum_probs=255.8

Q ss_pred             cchhhhccCC-CCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            4 TAAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         4 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      |||+++..++ ..+++.+.+.|+++++||+|++.++++|++|+....+ .....+|.++|||++|+|+++|++++.|++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~-~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G   79 (325)
T cd08264           1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINA-VKVKPMPHIPGAEFAGVVEEVGDHVKGVKKG   79 (325)
T ss_pred             CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhC-CCCCCCCeecccceeEEEEEECCCCCCCCCC
Confidence            6888887665 3488888899889999999999999999999988764 2223457889999999999999999999999


Q ss_pred             CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336           83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  162 (373)
Q Consensus        83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~  162 (373)
                      |+|++.+..+|++|++|+.|+++.|++..+.   |+                   ...|+|++|+.++++.++++|++++
T Consensus        80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~v~~~~~~~~p~~~~  137 (325)
T cd08264          80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGII---GV-------------------VSNGGYAEYIVVPEKNLFKIPDSIS  137 (325)
T ss_pred             CEEEECCCcCCCCChhhcCCCccccCcccee---ec-------------------cCCCceeeEEEcCHHHceeCCCCCC
Confidence            9999999999999999999999999864322   21                   1236999999999999999999999


Q ss_pred             chhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336          163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  241 (373)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~  241 (373)
                      +++++.+++++.+||+++. .++++++++|+|+|+ |.+|++++++|+++|+ +|+++.+    .+.++++|++.+++.+
T Consensus       138 ~~~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~~~  211 (325)
T cd08264         138 DELAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVDYD  211 (325)
T ss_pred             HHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeecch
Confidence            9999999999999999865 488999999999997 9999999999999999 6777752    3677889998887654


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEeccCCC
Q 017336          242 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYK  320 (373)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~  320 (373)
                      +    +.+.+++.+ +++|+|+|++|+ ..+..++++|+++ |+++.+|... ......+...+ .++.++.++..+.  
T Consensus       212 ~----~~~~l~~~~-~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--  281 (325)
T cd08264         212 E----VEEKVKEIT-KMADVVINSLGS-SFWDLSLSVLGRG-GRLVTFGTLT-GGEVKLDLSDLYSKQISIIGSTGGT--  281 (325)
T ss_pred             H----HHHHHHHHh-CCCCEEEECCCH-HHHHHHHHhhccC-CEEEEEecCC-CCCCccCHHHHhhcCcEEEEccCCC--
Confidence            3    344566655 689999999998 7889999999997 9999998742 11223332323 3666777764332  


Q ss_pred             CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce
Q 017336          321 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL  365 (373)
Q Consensus       321 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~  365 (373)
                       .+.+.++++++...  .  ..+.+.|+++++++|++.+.++...
T Consensus       282 -~~~~~~~~~l~~~~--~--~~~~~~~~~~~~~~a~~~~~~~~~~  321 (325)
T cd08264         282 -RKELLELVKIAKDL--K--VKVWKTFKLEEAKEALKELFSKERD  321 (325)
T ss_pred             -HHHHHHHHHHHHcC--C--ceeEEEEcHHHHHHHHHHHHcCCCc
Confidence             24678888888533  2  2367899999999999998876643

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=2.5e-38  Score=295.17  Aligned_cols=327  Identities=30%  Similarity=0.472  Sum_probs=268.1

Q ss_pred             chhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCCE
Q 017336            5 AAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDH   84 (373)
Q Consensus         5 ~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~   84 (373)
                      ||+++.+++..+++.+.+.|.+.+++|+|++.++++|++|+....+..+...+|.++|||++|+|+++|++++.|++||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~   80 (330)
T cd08245           1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR   80 (330)
T ss_pred             CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence            67888888667999999999999999999999999999999988876655567889999999999999999999999999


Q ss_pred             EeecCc-CCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336           85 VLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  163 (373)
Q Consensus        85 V~~~~~-~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~  163 (373)
                      |++.+. .+|+.|++|.+++++.|++..+.   ++.                   ..|+|++|+.+++++++++|+++++
T Consensus        81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~v~~~~~~~~p~~~~~  138 (330)
T cd08245          81 VGVGWLVGSCGRCEYCRRGLENLCQKAVNT---GYT-------------------TQGGYAEYMVADAEYTVLLPDGLPL  138 (330)
T ss_pred             EEEccccCCCCCChhhhCcCcccCcCcccc---Ccc-------------------cCCccccEEEEcHHHeEECCCCCCH
Confidence            987554 67999999999999999986544   210                   1258999999999999999999999


Q ss_pred             hhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCC
Q 017336          164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH  243 (373)
Q Consensus       164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~  243 (373)
                      .+++.+++.+.+||.++.. ..+.++++|||+|+|.+|++++++|+.+|+ +|+++.+++++.+.++++|++.+++....
T Consensus       139 ~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~  216 (330)
T cd08245         139 AQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGAE  216 (330)
T ss_pred             HHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCCc
Confidence            9999999999999998754 789999999999988899999999999999 79999999999999999998888765543


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccch-hhcccceEEEEeccCCCCC
Q 017336          244 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPR  322 (373)
Q Consensus       244 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~  322 (373)
                      .  ....    ..+++|+++|++++......++++++++ |+++.++..... ....... .+.++.++.++..+.   .
T Consensus       217 ~--~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~  285 (330)
T cd08245         217 L--DEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESP-PFSPDIFPLIMKRQSIAGSTHGG---R  285 (330)
T ss_pred             c--hHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCCC-ccccchHHHHhCCCEEEEeccCC---H
Confidence            2  2221    2247999999988778889999999997 999999865322 1111122 223677777765432   2


Q ss_pred             CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEEE
Q 017336          323 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCII  369 (373)
Q Consensus       323 ~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v~  369 (373)
                      ..++++++++.++.+.+   ..+.|+++++++|++.+.+++.. |+++
T Consensus       286 ~~~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         286 ADLQEALDFAAEGKVKP---MIETFPLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             HHHHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence            35778889998987753   45789999999999999877754 6553

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.1e-38  Score=293.77  Aligned_cols=334  Identities=24%  Similarity=0.365  Sum_probs=273.6

Q ss_pred             cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCCC
Q 017336            4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |||+++...+.+  +++.+.+.|.+.+++|+|++.++++|++|+..+.|..+ ...+|.++|||++|+|+.+|++++.|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (342)
T cd08266           1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK   80 (342)
T ss_pred             CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence            688888744432  78888888889999999999999999999988877543 234578899999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||+|++.+..+|+.|.+|.++.+|.|+...+.   |..                   ..|+|++|+.++++.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~-------------------~~g~~~~~~~~~~~~~~~~p~~  138 (342)
T cd08266          81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGIL---GEH-------------------VDGGYAEYVAVPARNLLPIPDN  138 (342)
T ss_pred             CCCEEEEccccccccchhhcccccccccccccc---ccc-------------------cCcceeEEEEechHHceeCCCC
Confidence            999999999999999999999999999864222   211                   1368999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      +++++++.+++++.+||+++.+...+.++++++|+|+ +.+|++++++++..|+ +|+++++++++.+.++.++.+.+++
T Consensus       139 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~  217 (342)
T cd08266         139 LSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVID  217 (342)
T ss_pred             CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEe
Confidence            9999999999899999998878888999999999998 6999999999999999 7888889999999998888877776


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-hhhcccceEEEEecc
Q 017336          240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFG  317 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~  317 (373)
                      ....+  +.+.+...+.+ ++|++++++|. ..+..++++++++ |+++.++..... ...... ..+.++.++.+....
T Consensus       218 ~~~~~--~~~~~~~~~~~~~~d~~i~~~g~-~~~~~~~~~l~~~-G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  292 (342)
T cd08266         218 YRKED--FVREVRELTGKRGVDVVVEHVGA-ATWEKSLKSLARG-GRLVTCGATTGY-EAPIDLRHVFWRQLSILGSTMG  292 (342)
T ss_pred             cCChH--HHHHHHHHhCCCCCcEEEECCcH-HHHHHHHHHhhcC-CEEEEEecCCCC-CCCcCHHHHhhcceEEEEEecC
Confidence            54433  66666666655 89999999998 6788999999997 999999876432 122222 224577777776543


Q ss_pred             CCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336          318 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  370 (373)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~  370 (373)
                      .   ...+.++++++.++.+.+  ++++.|+++++++|++.+.++.. .|++++
T Consensus       293 ~---~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  341 (342)
T cd08266         293 T---KAELDEALRLVFRGKLKP--VIDSVFPLEEAAEAHRRLESREQFGKIVLT  341 (342)
T ss_pred             C---HHHHHHHHHHHHcCCccc--ceeeeEcHHHHHHHHHHHHhCCCCceEEEe
Confidence            2   235778889999987653  47889999999999999887664 488875

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=4.4e-38  Score=293.33  Aligned_cols=322  Identities=27%  Similarity=0.385  Sum_probs=264.5

Q ss_pred             cchhhhccCCC----CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCC
Q 017336            4 TAAAVAWEAGK----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL   79 (373)
Q Consensus         4 ~~a~~~~~~~~----~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~   79 (373)
                      |||+++.++++    ++++.+.+.|.++++||+||+.++++|++|+....|..+...+|.++|||++|+|+++|+++..+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF   80 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence            68888888774    58888888888999999999999999999999888866555678899999999999999999999


Q ss_pred             CCCCEEeecC-cCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336           80 EVGDHVLPVF-TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  158 (373)
Q Consensus        80 ~~Gd~V~~~~-~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p  158 (373)
                      ++||+|++.+ .++|+.|.+|.++..++|....+.   |+.                   ..|+|++|+.++.+.++++|
T Consensus        81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~~~~~~~~~lp  138 (329)
T cd08298          81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT---GYT-------------------VDGGYAEYMVADERFAYPIP  138 (329)
T ss_pred             cCCCEEEEeccCCCCCCChhHhCcChhhCCCcccc---ccc-------------------cCCceEEEEEecchhEEECC
Confidence            9999997654 468999999999999999865543   221                   13699999999999999999


Q ss_pred             CCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee
Q 017336          159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  238 (373)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi  238 (373)
                      +++++.+++.+++++.|||+++ +.+++++++++||+|+|.+|++++++++..|+ +|+++.+++++++.++++|++.++
T Consensus       139 ~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~  216 (329)
T cd08298         139 EDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAG  216 (329)
T ss_pred             CCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEe
Confidence            9999999999999999999987 88999999999999999999999999999998 899998999999999999998777


Q ss_pred             cCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccC
Q 017336          239 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN  318 (373)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~  318 (373)
                      +....           ...++|+++++.+....++.++++++++ |+++.+|... ..........+.++..+.++... 
T Consensus       217 ~~~~~-----------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-  282 (329)
T cd08298         217 DSDDL-----------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHM-SDIPAFDYELLWGEKTIRSVANL-  282 (329)
T ss_pred             ccCcc-----------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCC-CCCCccchhhhhCceEEEEecCC-
Confidence            65432           1237999999977768899999999997 9999988532 11111112223355566665422 


Q ss_pred             CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEE
Q 017336          319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCI  368 (373)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v  368 (373)
                        ..+.+.+++++++++.+.+   ..+.|+++++++|++.+.+++.. |++
T Consensus       283 --~~~~~~~~~~l~~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v  328 (329)
T cd08298         283 --TRQDGEEFLKLAAEIPIKP---EVETYPLEEANEALQDLKEGRIRGAAV  328 (329)
T ss_pred             --CHHHHHHHHHHHHcCCCCc---eEEEEeHHHHHHHHHHHHcCCCcceee
Confidence              1235788889999987754   36889999999999999887654 665

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=2.1e-38  Score=295.37  Aligned_cols=304  Identities=21%  Similarity=0.250  Sum_probs=243.5

Q ss_pred             ccchhhhccC--CCC----eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCC
Q 017336            3 STAAAVAWEA--GKP----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV   76 (373)
Q Consensus         3 ~~~a~~~~~~--~~~----~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v   76 (373)
                      +|||+++.++  +.+    +++.+.+.|+|+++||+|||.++++|+.|......   ..++|.++|+|++|+|++   .+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~   75 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KN   75 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CC
Confidence            5889888883  333    78899999999999999999999999987653211   124688999999999985   45


Q ss_pred             CCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC---c
Q 017336           77 SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG---C  153 (373)
Q Consensus        77 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~---~  153 (373)
                      +.|++||||+..                                                    ++|++|+.++++   .
T Consensus        76 ~~~~~Gd~V~~~----------------------------------------------------~~~~~~~~~~~~~~~~  103 (329)
T cd08294          76 SKFPVGTIVVAS----------------------------------------------------FGWRTHTVSDGKDQPD  103 (329)
T ss_pred             CCCCCCCEEEee----------------------------------------------------CCeeeEEEECCccccc
Confidence            679999999843                                                    378999999999   9


Q ss_pred             eEeCCCCCC--c---hhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHH
Q 017336          154 VAKINPLAP--L---DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE  227 (373)
Q Consensus       154 ~~~~p~~~~--~---~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~  227 (373)
                      ++++|++++  +   ..+++++++++|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+
T Consensus       104 ~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~  182 (329)
T cd08294         104 LYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVA  182 (329)
T ss_pred             eEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Confidence            999999988  2   2334678899999999888899999999999986 9999999999999999 7999989999999


Q ss_pred             HHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCce--e---eccc
Q 017336          228 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV--F---MTKP  302 (373)
Q Consensus       228 ~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~--~---~~~~  302 (373)
                      .++++|++.++++.+.+  +.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|.......  .   ....
T Consensus       183 ~l~~~Ga~~vi~~~~~~--~~~~v~~~~~~gvd~vld~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~  258 (329)
T cd08294         183 WLKELGFDAVFNYKTVS--LEEALKEAAPDGIDCYFDNVGG-EFSSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQ  258 (329)
T ss_pred             HHHHcCCCEEEeCCCcc--HHHHHHHHCCCCcEEEEECCCH-HHHHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccH
Confidence            99999999999887655  7788888776689999999998 7889999999997 99999986432111  1   1111


Q ss_pred             -hhhcccceEEEEeccCCC--CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          303 -INVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       303 -~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                       ..+.+++++.++....+.  ..+.++++++++.++++.+.  ....|+++++++|++.+.+++. +|+++++
T Consensus       259 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         259 ETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             HHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence             223477888876643321  11236778899999988765  3457999999999999988775 5888864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=2.7e-38  Score=294.23  Aligned_cols=290  Identities=19%  Similarity=0.252  Sum_probs=234.1

Q ss_pred             eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEeecCcCCCCC
Q 017336           16 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGD   95 (373)
Q Consensus        16 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~   95 (373)
                      +++.+.+.|+|++|||||||.++++|+.|..   |.++....|.++|.|++|+|+++|+   .|++||||+..       
T Consensus        19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~-------   85 (325)
T TIGR02825        19 FELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS-------   85 (325)
T ss_pred             eEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe-------
Confidence            8889999999999999999999999997654   3333334578999999999999874   59999999843       


Q ss_pred             CccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeC----CCCCCchhh-hhcc
Q 017336           96 CRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI----NPLAPLDKV-CILS  170 (373)
Q Consensus        96 ~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~----p~~~~~~~a-a~~~  170 (373)
                                                                   ++|++|+.++.+.+.++    |++++++++ ++++
T Consensus        86 ---------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~  120 (325)
T TIGR02825        86 ---------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVG  120 (325)
T ss_pred             ---------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcc
Confidence                                                         26899999999888877    899999887 6788


Q ss_pred             cchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHH
Q 017336          171 CGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQE  249 (373)
Q Consensus       171 ~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~  249 (373)
                      ++++|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|++.++++.+.+ .+.+
T Consensus       121 ~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~-~~~~  198 (325)
T TIGR02825       121 MPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTVK-SLEE  198 (325)
T ss_pred             cHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccccc-cHHH
Confidence            999999999888899999999999986 9999999999999999 799998999999999999999999876532 2555


Q ss_pred             HHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCC---ceeec--cc-hhhcccceEEEEeccCCCC--
Q 017336          250 VIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD---AVFMT--KP-INVLNERTLKGTFFGNYKP--  321 (373)
Q Consensus       250 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~---~~~~~--~~-~~~~~~~~i~g~~~~~~~~--  321 (373)
                      .++..+++++|++||++|+ ..+..++++++++ |+++.+|.....   .....  .. ..+.+++++.++....+..  
T Consensus       199 ~~~~~~~~gvdvv~d~~G~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  276 (325)
T TIGR02825       199 TLKKASPDGYDCYFDNVGG-EFSNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEV  276 (325)
T ss_pred             HHHHhCCCCeEEEEECCCH-HHHHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhh
Confidence            6666665589999999998 5679999999997 999999875321   11111  11 1233777887765432211  


Q ss_pred             -CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 017336          322 -RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII  369 (373)
Q Consensus       322 -~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~  369 (373)
                       .+.++++++++.++++.+.  +...|+|+++++|++.+.+++. +|+|+
T Consensus       277 ~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvVv  324 (325)
T TIGR02825       277 RQKALKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGMLKGENLGKTIV  324 (325)
T ss_pred             hHHHHHHHHHHHHCCCcccc--eeccccHHHHHHHHHHHhcCCCCCeEEe
Confidence             2357789999999988765  5577999999999999988775 48776

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.8e-37  Score=286.11  Aligned_cols=300  Identities=26%  Similarity=0.446  Sum_probs=247.9

Q ss_pred             cchhhhccCC-CCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            4 TAAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         4 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      |||+++.+.+ ..+++++++.|.+.++||+|++.++++|++|+....+.+.....|.++|+|++|+|+++|++++.|++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   80 (306)
T cd08258           1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG   80 (306)
T ss_pred             CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence            5788877655 348999999999999999999999999999998877765444557899999999999999999999999


Q ss_pred             CEEeecC-cCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336           83 DHVLPVF-TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  161 (373)
Q Consensus        83 d~V~~~~-~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~  161 (373)
                      |+|++.+ ..+|+.|++|.++.++.|......   |.                   ...|+|++|++++++.++++|+++
T Consensus        81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~v~~~~~~~lp~~~  138 (306)
T cd08258          81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKGI---GT-------------------QADGGFAEYVLVPEESLHELPENL  138 (306)
T ss_pred             CEEEEccCcCCCCCCcchhCcCcccCCCCcee---ee-------------------cCCCceEEEEEcchHHeEECcCCC
Confidence            9999876 478999999999999999864321   21                   123699999999999999999999


Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEE--cCChhHHHHHHhcCCceeec
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGV--DRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~--~~~~~~~~~~~~lg~~~vi~  239 (373)
                      ++++++ ++..+++||+++...+.+.++++|||.|+|.+|++++|+|+++|+ +|+++  .+++++.+.++++|++.+ +
T Consensus       139 ~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~  215 (306)
T cd08258         139 SLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-N  215 (306)
T ss_pred             CHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-C
Confidence            999887 666888999998888899999999998889999999999999999 67666  345668888899999877 6


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEecc
Q 017336          240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG  317 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~  317 (373)
                      +...+  +.+.+...+++ ++|++||++|+...+..++++|+++ |+++.+|.... ....+....+ .++++|.|+.++
T Consensus       216 ~~~~~--~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~  291 (306)
T cd08258         216 GGEED--LAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFGP-LAASIDVERIIQKELSVIGSRSS  291 (306)
T ss_pred             CCcCC--HHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCC-CCcccCHHHHhhcCcEEEEEecC
Confidence            65554  77778777765 8999999998767889999999997 99999998652 2233332323 499999998864


Q ss_pred             CCCCCCCHHHHHHHHHcC
Q 017336          318 NYKPRTDLPSVVDMYMNK  335 (373)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~  335 (373)
                      .   +++++++++++++|
T Consensus       292 ~---~~~~~~~~~~~~~~  306 (306)
T cd08258         292 T---PASWETALRLLASG  306 (306)
T ss_pred             c---hHhHHHHHHHHhcC
Confidence            4   45789999988764

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.8e-37  Score=291.68  Aligned_cols=322  Identities=25%  Similarity=0.289  Sum_probs=254.0

Q ss_pred             cchhhhccCCCC--eEEE-EeecCCCCCCeEEEEEeeeecCcccccccccCCC--------------------CCCCCcc
Q 017336            4 TAAAVAWEAGKP--LIIQ-DVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ--------------------TPLFPRI   60 (373)
Q Consensus         4 ~~a~~~~~~~~~--~~~~-~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--------------------~~~~p~i   60 (373)
                      |||+++...+.+  +++. +.+.|.|.+++|+|||.++++|++|+....|.++                    ...+|.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~   80 (350)
T cd08274           1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI   80 (350)
T ss_pred             CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence            688887766543  4554 3577788999999999999999999988776432                    2456889


Q ss_pred             ccccceEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCC
Q 017336           61 FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGT  140 (373)
Q Consensus        61 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~  140 (373)
                      +|||++|+|+++|++++.|++||+|++.+..+|+.|..|.     .|..   .   |..                   ..
T Consensus        81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~-----~~~~---~---~~~-------------------~~  130 (350)
T cd08274          81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPA-----DIDY---I---GSE-------------------RD  130 (350)
T ss_pred             cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccc-----cccc---c---CCC-------------------CC
Confidence            9999999999999999999999999998888888876642     1211   0   100                   12


Q ss_pred             cceeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE
Q 017336          141 STFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV  219 (373)
Q Consensus       141 G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~  219 (373)
                      |+|++|+.++.+.++++|+++++.+++.+++++.|||+++ ....+.++++|||+|+ |.+|++++++|+.+|+ +++++
T Consensus       131 g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~  208 (350)
T cd08274         131 GGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV  208 (350)
T ss_pred             ccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEE
Confidence            5999999999999999999999999999999999999986 7788999999999998 9999999999999999 67777


Q ss_pred             cCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCcee
Q 017336          220 DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF  298 (373)
Q Consensus       220 ~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~  298 (373)
                      .+++ +++.++++|++.+++.....  +.+  ...+.+ ++|++||++|+ ..+..++++++++ |+++.+|..... ..
T Consensus       209 ~~~~-~~~~~~~~g~~~~~~~~~~~--~~~--~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~  280 (350)
T cd08274         209 AGAA-KEEAVRALGADTVILRDAPL--LAD--AKALGGEPVDVVADVVGG-PLFPDLLRLLRPG-GRYVTAGAIAGP-VV  280 (350)
T ss_pred             eCch-hhHHHHhcCCeEEEeCCCcc--HHH--HHhhCCCCCcEEEecCCH-HHHHHHHHHhccC-CEEEEecccCCc-cc
Confidence            6655 88888999997665544332  333  344454 89999999998 6889999999997 999999865321 12


Q ss_pred             eccchh-hcccceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336          299 MTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  370 (373)
Q Consensus       299 ~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~  370 (373)
                      .++... +.++.++.++....   .+.+.++++++.++++..  ++.+.|+++++++|++.+.++.. .|++++
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~  349 (350)
T cd08274         281 ELDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLV  349 (350)
T ss_pred             cCCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEEe
Confidence            333333 34788888876532   346888999999997653  46789999999999999987764 488875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=3.3e-37  Score=287.24  Aligned_cols=314  Identities=21%  Similarity=0.263  Sum_probs=252.6

Q ss_pred             ccchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 017336            3 STAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         3 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      +||++++.+++.+  +++++++.|.|+++||+||+.++++|++|+....+.++...+|.++|||++|+|+.+|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~   80 (327)
T PRK10754          1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK   80 (327)
T ss_pred             CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence            3899999887775  88899999999999999999999999999998877666555788999999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||+|+...                                                .+.|+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~------------------------------------------------~~~g~~~~~v~v~~~~~~~lp~~  112 (327)
T PRK10754         81 VGDRVVYAQ------------------------------------------------SALGAYSSVHNVPADKAAILPDA  112 (327)
T ss_pred             CCCEEEECC------------------------------------------------CCCcceeeEEEcCHHHceeCCCC
Confidence            999997431                                                01258999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      +++++++.+++.+.+||.++.+...+.++++|+|+|+ |.+|++++|+|+.+|+ +|+++++++++.+.++++|++.+++
T Consensus       113 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~  191 (327)
T PRK10754        113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVIN  191 (327)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEc
Confidence            9999999988899999998877788999999999975 9999999999999999 7888889999999999999988887


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc-ccceE-EEEec
Q 017336          240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTL-KGTFF  316 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i-~g~~~  316 (373)
                      .+..+  +.+.+++.+++ ++|++|||+|+ .....++++++++ |+++.+|...... .......+. ++..+ .....
T Consensus       192 ~~~~~--~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~  266 (327)
T PRK10754        192 YREEN--IVERVKEITGGKKVRVVYDSVGK-DTWEASLDCLQRR-GLMVSFGNASGPV-TGVNLGILNQKGSLYVTRPSL  266 (327)
T ss_pred             CCCCc--HHHHHHHHcCCCCeEEEEECCcH-HHHHHHHHHhccC-CEEEEEccCCCCC-CCcCHHHHhccCceEEeccee
Confidence            76554  77888888877 89999999998 6788899999997 9999998764211 111111111 11111 10000


Q ss_pred             -cCCCCC----CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336          317 -GNYKPR----TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  370 (373)
Q Consensus       317 -~~~~~~----~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~  370 (373)
                       ......    +.+.+++++++++.+.+..+..+.|+++++.++++.+.+++. .|+++.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  326 (327)
T PRK10754        267 QGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI  326 (327)
T ss_pred             ecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence             001111    124567889999988765556789999999999999887774 588875

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=4.8e-37  Score=287.78  Aligned_cols=314  Identities=23%  Similarity=0.332  Sum_probs=253.3

Q ss_pred             cchhhhccCCCC---eEEEEeecCCCCC-CeEEEEEeeeecCcccccccccCCCCC-C----CCccccccceEEEEEeCC
Q 017336            4 TAAAVAWEAGKP---LIIQDVEVAPPQA-MEVRIKIKYTSLCRTDLYFWESKGQTP-L----FPRIFGHEAAGVVESVGE   74 (373)
Q Consensus         4 ~~a~~~~~~~~~---~~~~~~~~p~~~~-~evlV~v~~~~i~~~D~~~~~g~~~~~-~----~p~i~G~e~~G~V~~vG~   74 (373)
                      |||+++...+.+   +++++.|.|.|.+ +||+||+.++++|++|+....|..+.. .    +|.++|||++|+|+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS   80 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence            789999988875   7999999999988 999999999999999999887755422 2    577999999999999999


Q ss_pred             CCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCce
Q 017336           75 GVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCV  154 (373)
Q Consensus        75 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~  154 (373)
                      ++..|++||+|++...                                                +.|+|++|+.++++.+
T Consensus        81 ~v~~~~~Gd~V~~~~~------------------------------------------------~~g~~~~~~~v~~~~~  112 (341)
T cd08290          81 GVKSLKPGDWVIPLRP------------------------------------------------GLGTWRTHAVVPADDL  112 (341)
T ss_pred             CCCCCCCCCEEEecCC------------------------------------------------CCccchheEeccHHHe
Confidence            9999999999985421                                                1259999999999999


Q ss_pred             EeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh----hHHHHH
Q 017336          155 AKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS----KRFEEA  229 (373)
Q Consensus       155 ~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~----~~~~~~  229 (373)
                      +++|+++++++++.+++.+.|||+++.....+.++++|||+|+ |.+|++++|+|+++|+ +++++.+++    ++++.+
T Consensus       113 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~  191 (341)
T cd08290         113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERL  191 (341)
T ss_pred             EeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHH
Confidence            9999999999999999999999999877788999999999987 9999999999999999 677776665    678888


Q ss_pred             HhcCCceeecCCCC-CccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-hhhcc
Q 017336          230 KKFGVTDFVNTSEH-DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLN  307 (373)
Q Consensus       230 ~~lg~~~vi~~~~~-~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~  307 (373)
                      +++|++.++++... ...+.+.++...++++|++|||+|+ ..+...+++++++ |+++.+|..... ...... ..+.+
T Consensus       192 ~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~  268 (341)
T cd08290         192 KALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGG-KSATELARLLSPG-GTMVTYGGMSGQ-PVTVPTSLLIFK  268 (341)
T ss_pred             HhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCc-HhHHHHHHHhCCC-CEEEEEeccCCC-CcccCHHHHhhC
Confidence            99999998877653 0126677777665589999999998 5667789999997 999999864322 222222 22458


Q ss_pred             cceEEEEeccCCCC-------CCCHHHHHHHHHcCCCCCCCceeeee---ccccHHHHHHHHHcCCc-eeEEEec
Q 017336          308 ERTLKGTFFGNYKP-------RTDLPSVVDMYMNKQLELEKFITHRI---PFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       308 ~~~i~g~~~~~~~~-------~~~~~~~~~~l~~~~l~~~~~~~~~~---~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      +.++.+........       .+.+.++++++.++.+.+.  ....+   +++++++|++.+.+++. .|+++.+
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         269 DITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             CceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence            88888876543211       0147778888889987654  44556   99999999999987775 4888764

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=8.3e-37  Score=285.53  Aligned_cols=308  Identities=17%  Similarity=0.185  Sum_probs=243.9

Q ss_pred             chhhhccC---CCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCC
Q 017336            5 AAAVAWEA---GKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL   79 (373)
Q Consensus         5 ~a~~~~~~---~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~   79 (373)
                      ||+++..+   +++  +++.++|.|+|+++||+|||+++++|+.|+..+.+..+...+|.++|+|++|+|+++|++++.|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (336)
T TIGR02817         1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF   80 (336)
T ss_pred             CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence            56777775   443  7888999999999999999999999999998887765555678899999999999999999999


Q ss_pred             CCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC
Q 017336           80 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP  159 (373)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~  159 (373)
                      ++||+|+....                                              ....|+|++|+.++++.++++|+
T Consensus        81 ~~Gd~V~~~~~----------------------------------------------~~~~g~~~~~~~v~~~~~~~ip~  114 (336)
T TIGR02817        81 KPGDEVWYAGD----------------------------------------------IDRPGSNAEFHLVDERIVGHKPK  114 (336)
T ss_pred             CCCCEEEEcCC----------------------------------------------CCCCCcccceEEEcHHHcccCCC
Confidence            99999985410                                              00136999999999999999999


Q ss_pred             CCCchhhhhcccchhhhhhhhhhccCCCC-----CCEEEEECC-CHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHhc
Q 017336          160 LAPLDKVCILSCGVSTGLGATLNVAKPER-----GSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKF  232 (373)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----~~~vlI~G~-g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~~~~l  232 (373)
                      ++++++++.+++++.|||+++....++.+     +++|||+|+ |.+|++++|+|+++ |+ +|+++.+++++.+.++++
T Consensus       115 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~  193 (336)
T TIGR02817       115 SLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLEL  193 (336)
T ss_pred             CCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHc
Confidence            99999999999999999999877788776     999999986 99999999999998 99 899998889999999999


Q ss_pred             CCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc-ccceE
Q 017336          233 GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTL  311 (373)
Q Consensus       233 g~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i  311 (373)
                      |+++++++.. +  +.+.+++..++++|+++|++++......++++++++ |+++.++..   ..+.  ...+. ++.++
T Consensus       194 g~~~~~~~~~-~--~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~---~~~~--~~~~~~~~~~~  264 (336)
T TIGR02817       194 GAHHVIDHSK-P--LKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDP---AELD--ISPFKRKSISL  264 (336)
T ss_pred             CCCEEEECCC-C--HHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEccc---cccc--chhhhhcceEE
Confidence            9999887654 2  777777754448999999987768889999999997 999988532   1122  22222 44555


Q ss_pred             EEEeccC--CCC-------CCCHHHHHHHHHcCCCCCCCceeeee---ccccHHHHHHHHHcCCc-eeEEEe
Q 017336          312 KGTFFGN--YKP-------RTDLPSVVDMYMNKQLELEKFITHRI---PFSEINKAFEYMVKGEG-LRCIIS  370 (373)
Q Consensus       312 ~g~~~~~--~~~-------~~~~~~~~~~l~~~~l~~~~~~~~~~---~l~~~~~a~~~l~~~~~-~k~v~~  370 (373)
                      .+..+..  ...       .+.++++++++.++.+.+.  +.+.+   +++++++|++.+.+++. +|++++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       265 HWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTT--LAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             EEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeecc--chhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            5433221  000       0236778899999977542  34445   46899999999988775 477764

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=5.3e-36  Score=278.51  Aligned_cols=312  Identities=20%  Similarity=0.227  Sum_probs=253.4

Q ss_pred             cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC---CCCCCccccccceEEEEEeCCCCCC
Q 017336            4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSD   78 (373)
Q Consensus         4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~   78 (373)
                      |||+++.+++.+  +++.+.+.|.+.++||+|++.++++|++|+....|..+   ....|.++|||++|+|+++|++++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~   80 (324)
T cd08244           1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP   80 (324)
T ss_pred             CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence            688888776653  66777778888999999999999999999988877543   2345788999999999999999999


Q ss_pred             CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336           79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  158 (373)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p  158 (373)
                      +++||+|++...                                               ...|+|++|+.++++.++++|
T Consensus        81 ~~~Gd~V~~~~~-----------------------------------------------~~~g~~~~~~~v~~~~~~~lp  113 (324)
T cd08244          81 AWLGRRVVAHTG-----------------------------------------------RAGGGYAELAVADVDSLHPVP  113 (324)
T ss_pred             CCCCCEEEEccC-----------------------------------------------CCCceeeEEEEEchHHeEeCC
Confidence            999999986521                                               013699999999999999999


Q ss_pred             CCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee
Q 017336          159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF  237 (373)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v  237 (373)
                      +++++.+++.+++.+.||| ++.+.+.++++++|||+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++.+
T Consensus       114 ~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~  191 (324)
T cd08244         114 DGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVA  191 (324)
T ss_pred             CCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence            9999999999999999995 4677888999999999986 9999999999999999 79999899999999999999888


Q ss_pred             ecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-hhhcccceEEEEe
Q 017336          238 VNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTF  315 (373)
Q Consensus       238 i~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~  315 (373)
                      ++....+  +.+.+.+.+++ ++|+++|++|+ .....++++++++ |+++.+|...... ...+. ..+.++.++.++.
T Consensus       192 ~~~~~~~--~~~~~~~~~~~~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~  266 (324)
T cd08244         192 VDYTRPD--WPDQVREALGGGGVTVVLDGVGG-AIGRAALALLAPG-GRFLTYGWASGEW-TALDEDDARRRGVTVVGLL  266 (324)
T ss_pred             EecCCcc--HHHHHHHHcCCCCceEEEECCCh-HhHHHHHHHhccC-cEEEEEecCCCCC-CccCHHHHhhCCcEEEEee
Confidence            8766544  77777777776 89999999998 4668999999997 9999998765332 23332 2244788888776


Q ss_pred             ccCCCC---CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          316 FGNYKP---RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       316 ~~~~~~---~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      ......   .+.+.++++++.++.+..  ++.+.|+++++++|++.+.+++. .|+++++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         267 GVQAERGGLRALEARALAEAAAGRLVP--VVGQTFPLERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             cccCCHHHHHHHHHHHHHHHHCCCccC--ccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence            543211   134667888888887653  36789999999999999988775 4888753

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=8.9e-36  Score=278.28  Aligned_cols=329  Identities=26%  Similarity=0.349  Sum_probs=265.1

Q ss_pred             cchhhhccCC--CCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 017336            4 TAAAVAWEAG--KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         4 ~~a~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |||+++...+  ..+++++.+.|.++++|++|++.++++|++|+....|.++. ...|.++|||++|+|+++|+.++.++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK   80 (336)
T ss_pred             CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence            7899998765  33888888888899999999999999999999988775542 34678899999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||+|++.....|+.+.+|      .|......   |                   ....|+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~------~~~~~~~~---~-------------------~~~~g~~~~~~~~~~~~~~~lp~~  132 (336)
T cd08276          81 VGDRVVPTFFPNWLDGPPT------AEDEASAL---G-------------------GPIDGVLAEYVVLPEEGLVRAPDH  132 (336)
T ss_pred             CCCEEEEeccccccccccc------cccccccc---c-------------------cccCceeeeEEEecHHHeEECCCC
Confidence            9999998776666544333      33211000   1                   112368999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      +++.+++.+++.+.+||+++...+.++++++|+|+|+|++|++++++++.+|+ +|++++.++++++.++++|.+.+++.
T Consensus       133 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~  211 (336)
T cd08276         133 LSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINY  211 (336)
T ss_pred             CCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcC
Confidence            99999999999999999998777889999999999889999999999999999 79999899999999999999888876


Q ss_pred             CC-CCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccC
Q 017336          241 SE-HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN  318 (373)
Q Consensus       241 ~~-~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~  318 (373)
                      .. .+  +.+.+.+.+++ ++|+++|++++ .....++++++++ |+++.+|..............+.+++++.+.....
T Consensus       212 ~~~~~--~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (336)
T cd08276         212 RTTPD--WGEEVLKLTGGRGVDHVVEVGGP-GTLAQSIKAVAPG-GVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS  287 (336)
T ss_pred             CcccC--HHHHHHHHcCCCCCcEEEECCCh-HHHHHHHHhhcCC-CEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc
Confidence            55 33  77778888876 89999999986 7788999999997 99999987653321111122345888888876543


Q ss_pred             CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336          319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  370 (373)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~  370 (373)
                         .+.+.++++++.++.+...  ..+.|++++++++++.+.+++. .|++++
T Consensus       288 ---~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  335 (336)
T cd08276         288 ---RAQFEAMNRAIEAHRIRPV--IDRVFPFEEAKEAYRYLESGSHFGKVVIR  335 (336)
T ss_pred             ---HHHHHHHHHHHHcCCcccc--cCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence               3467888888888866543  5688999999999999887765 488775

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=6.4e-36  Score=278.72  Aligned_cols=311  Identities=25%  Similarity=0.312  Sum_probs=251.6

Q ss_pred             ccchhhhccCCC----CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCC
Q 017336            3 STAAAVAWEAGK----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVS   77 (373)
Q Consensus         3 ~~~a~~~~~~~~----~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~   77 (373)
                      +|||+++.+++.    ++++++.+.|.+.++|++||+.++++|+.|+....|..+. ..+|.++|+|++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~   80 (329)
T cd08250           1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT   80 (329)
T ss_pred             CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence            589999888666    4889999999999999999999999999999887776542 45788999999999999999999


Q ss_pred             CCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeC
Q 017336           78 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI  157 (373)
Q Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~  157 (373)
                      .+++||+|++..                                                  .|+|++|+.++++.++++
T Consensus        81 ~~~~Gd~V~~~~--------------------------------------------------~g~~~s~~~v~~~~~~~i  110 (329)
T cd08250          81 DFKVGDAVATMS--------------------------------------------------FGAFAEYQVVPARHAVPV  110 (329)
T ss_pred             CCCCCCEEEEec--------------------------------------------------CcceeEEEEechHHeEEC
Confidence            999999998541                                                  258999999999999999


Q ss_pred             CCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce
Q 017336          158 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  236 (373)
Q Consensus       158 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~  236 (373)
                      |++  +.+++.+++++.|||+++.+...+.++++|+|+|+ |.+|++++|+|+..|+ .|+++.+++++.+.++++|++.
T Consensus       111 p~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~  187 (329)
T cd08250         111 PEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDR  187 (329)
T ss_pred             CCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCce
Confidence            997  35677888899999999877788999999999986 9999999999999999 7888888899999999999988


Q ss_pred             eecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCc---------eeeccchhhcc
Q 017336          237 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA---------VFMTKPINVLN  307 (373)
Q Consensus       237 vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~---------~~~~~~~~~~~  307 (373)
                      +++....+  +.+.+....++++|++||++|+ ..+..++++++++ |+++.+|......         ...+....+.+
T Consensus       188 v~~~~~~~--~~~~~~~~~~~~vd~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (329)
T cd08250         188 PINYKTED--LGEVLKKEYPKGVDVVYESVGG-EMFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAK  263 (329)
T ss_pred             EEeCCCcc--HHHHHHHhcCCCCeEEEECCcH-HHHHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHhhc
Confidence            87765544  6666666554589999999997 7889999999997 9999998754221         11122233457


Q ss_pred             cceEEEEeccCCC--CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336          308 ERTLKGTFFGNYK--PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  370 (373)
Q Consensus       308 ~~~i~g~~~~~~~--~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~  370 (373)
                      +.++.++......  ..+.+.++++++.++.+.+.....+.++++++++|++.+.+++. .|++++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         264 SASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             CceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence            7888887643221  12346778888889877653334566899999999999987765 477753

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=9.3e-36  Score=257.61  Aligned_cols=296  Identities=18%  Similarity=0.287  Sum_probs=240.7

Q ss_pred             eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccce----EEEEEeCCCCCCCCCCCEEeecCcC
Q 017336           16 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAA----GVVESVGEGVSDLEVGDHVLPVFTG   91 (373)
Q Consensus        16 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~----G~V~~vG~~v~~~~~Gd~V~~~~~~   91 (373)
                      +++++.++|+|++||||||..|.+++|. .+.+....+..-.|.-+|-..+    |+|++  |+.+.|++||.|...   
T Consensus        27 F~lee~~vp~p~~GqvLl~~~ylS~DPy-mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~--S~~~~f~~GD~V~~~---  100 (340)
T COG2130          27 FRLEEVDVPEPGEGQVLLRTLYLSLDPY-MRGRMSDAPSYAPPVELGEVMVGGTVAKVVA--SNHPGFQPGDIVVGV---  100 (340)
T ss_pred             ceeEeccCCCCCcCceEEEEEEeccCHH-HeecccCCcccCCCcCCCceeECCeeEEEEe--cCCCCCCCCCEEEec---
Confidence            8999999999999999999999999983 2222222233334555555554    44544  677889999999844   


Q ss_pred             CCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchh--hhhc
Q 017336           92 ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK--VCIL  169 (373)
Q Consensus        92 ~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~--aa~~  169 (373)
                                                                       .+|+||..++.+.+.+++++.-+..  ...+
T Consensus       101 -------------------------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvL  131 (340)
T COG2130         101 -------------------------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVL  131 (340)
T ss_pred             -------------------------------------------------ccceEEEeechhhceecCCCCCCcchHHhhc
Confidence                                                             2899999999999999986643222  3346


Q ss_pred             ccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccH
Q 017336          170 SCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPI  247 (373)
Q Consensus       170 ~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~  247 (373)
                      ..+..|||.+|++.+++++|++|+|.+| |++|..+.|+||..|+ +|+++..+++|.+++.+ +|.+.+|||+..+  +
T Consensus       132 GmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d--~  208 (340)
T COG2130         132 GMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKAED--F  208 (340)
T ss_pred             CCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCccc--H
Confidence            7789999999999999999999999987 9999999999999999 99999999999999988 9999999999987  9


Q ss_pred             HHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCce--ee--cc--chhhcccceEEEEec-cCCC
Q 017336          248 QEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV--FM--TK--PINVLNERTLKGTFF-GNYK  320 (373)
Q Consensus       248 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~--~~--~~--~~~~~~~~~i~g~~~-~~~~  320 (373)
                      .+.+++..+.|+|+.||++|+ +.++..+..|+.. +|++.||..+.-..  ..  ..  +..+.+.+++.|+.. ..+.
T Consensus       209 ~~~L~~a~P~GIDvyfeNVGg-~v~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~  286 (340)
T COG2130         209 AQALKEACPKGIDVYFENVGG-EVLDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYD  286 (340)
T ss_pred             HHHHHHHCCCCeEEEEEcCCc-hHHHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhh
Confidence            999999999999999999999 8999999999996 99999998654221  11  11  122337899999887 3332


Q ss_pred             CC--CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEEEecCC
Q 017336          321 PR--TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCIISMED  373 (373)
Q Consensus       321 ~~--~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v~~~~~  373 (373)
                      .+  +..+++.+++++|+|+.+.  +..-.|+.+++||..|.++++. |.|+++.+
T Consensus       287 ~~~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~  340 (340)
T COG2130         287 QRFPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLLSGKNFGKLVVKVAD  340 (340)
T ss_pred             hhhHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence            22  4578899999999998874  5566899999999999999975 99998764

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-35  Score=274.91  Aligned_cols=314  Identities=19%  Similarity=0.271  Sum_probs=252.8

Q ss_pred             ccchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCC
Q 017336            3 STAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDL   79 (373)
Q Consensus         3 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~   79 (373)
                      +|||+++.+.+..  +++.+.+.|.+.++||+|||.++++|+.|+....+..+ ....|.++|+|++|+|+++|++++.+
T Consensus         1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~   80 (334)
T PTZ00354          1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF   80 (334)
T ss_pred             CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence            5999999887763  67778888889999999999999999999888776543 23456789999999999999999999


Q ss_pred             CCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC
Q 017336           80 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP  159 (373)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~  159 (373)
                      ++||+|+...                                                 ..|+|++|+++++++++++|+
T Consensus        81 ~~Gd~V~~~~-------------------------------------------------~~g~~~~~~~v~~~~~~~ip~  111 (334)
T PTZ00354         81 KEGDRVMALL-------------------------------------------------PGGGYAEYAVAHKGHVMHIPQ  111 (334)
T ss_pred             CCCCEEEEec-------------------------------------------------CCCceeeEEEecHHHcEeCCC
Confidence            9999998431                                                 125899999999999999999


Q ss_pred             CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee
Q 017336          160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  238 (373)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi  238 (373)
                      ++++.+++.+++++.+||+++.....+.++++|||+|+ |.+|++++++|+.+|+ +++++.+++++.+.++++|++.++
T Consensus       112 ~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~  190 (334)
T PTZ00354        112 GYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILI  190 (334)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence            99999999999999999999877788999999999986 9999999999999999 667788899999999999998888


Q ss_pred             cCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceee-ccchhh-cccceEEEEe
Q 017336          239 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM-TKPINV-LNERTLKGTF  315 (373)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~-~~~~~~-~~~~~i~g~~  315 (373)
                      +....+ .+.+.+.+.+++ ++|++||++++ ..+..++++++++ |+++.+|..... .+. +....+ .++.++.++.
T Consensus       191 ~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  266 (334)
T PTZ00354        191 RYPDEE-GFAPKVKKLTGEKGVNLVLDCVGG-SYLSETAEVLAVD-GKWIVYGFMGGA-KVEKFNLLPLLRKRASIIFST  266 (334)
T ss_pred             ecCChh-HHHHHHHHHhCCCCceEEEECCch-HHHHHHHHHhccC-CeEEEEecCCCC-cccccCHHHHHhhCCEEEeee
Confidence            764431 266677777765 89999999987 7889999999997 999999865422 222 333323 3666777765


Q ss_pred             ccCCCCC-------CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336          316 FGNYKPR-------TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       316 ~~~~~~~-------~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                      .......       +.++++++++.++.+..  ++.+.+++++++++++.+.+++. .|+++.+.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~  329 (334)
T PTZ00354        267 LRSRSDEYKADLVASFEREVLPYMEEGEIKP--IVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVN  329 (334)
T ss_pred             ccccchhhhHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence            4332211       12356778888887653  36788999999999999887764 58888764

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=1.6e-35  Score=277.15  Aligned_cols=315  Identities=23%  Similarity=0.312  Sum_probs=245.6

Q ss_pred             cchhhhccCC-CCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            4 TAAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         4 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      |||+++..++ ..+++++.+.|.|+++||+|++.++++|++|+....+.. ...+|.++|+|++|+|+.+|++++.|++|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G   79 (339)
T cd08249           1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG   79 (339)
T ss_pred             CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence            6899988874 338899999999999999999999999999998775543 22357789999999999999999999999


Q ss_pred             CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336           83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  162 (373)
Q Consensus        83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~  162 (373)
                      |+|+..+...|+                      |                   ..+.|+|++|+.++.+.++++|++++
T Consensus        80 d~V~~~~~~~~~----------------------~-------------------~~~~g~~~~~~~v~~~~~~~ip~~~~  118 (339)
T cd08249          80 DRVAGFVHGGNP----------------------N-------------------DPRNGAFQEYVVADADLTAKIPDNIS  118 (339)
T ss_pred             CEEEEEeccccC----------------------C-------------------CCCCCcccceEEechhheEECCCCCC
Confidence            999976432211                      0                   11236999999999999999999999


Q ss_pred             chhhhhcccchhhhhhhhhhccCC----------CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh
Q 017336          163 LDKVCILSCGVSTGLGATLNVAKP----------ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  231 (373)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~----------~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~  231 (373)
                      +++++.+++.+.|||+++.+...+          .++++|||+|+ |.+|++++++|+.+|+ +|+++. ++++.+.+++
T Consensus       119 ~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~  196 (339)
T cd08249         119 FEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKS  196 (339)
T ss_pred             HHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHh
Confidence            999999999999999987666544          78999999997 8999999999999999 777776 5688899999


Q ss_pred             cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhc--CCcEEEEEcCCCCCceeeccchhhcccc
Q 017336          232 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD--GWGVAVLVGVPSKDAVFMTKPINVLNER  309 (373)
Q Consensus       232 lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~--~~g~~v~~g~~~~~~~~~~~~~~~~~~~  309 (373)
                      +|++.+++....+  +.+.+++.+++++|++||++|++..+..+++++++  + |+++.+|.......+   .... ...
T Consensus       197 ~g~~~v~~~~~~~--~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~~~---~~~~-~~~  269 (339)
T cd08249         197 LGADAVFDYHDPD--VVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEETEP---RKGV-KVK  269 (339)
T ss_pred             cCCCEEEECCCch--HHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccccC---CCCc-eEE
Confidence            9998888876654  77778777766899999999986788999999999  8 999999876432200   0000 111


Q ss_pred             eEEEEeccC------CCCCCCHHHHHHHHHcCCCCCCCceeeeec--cccHHHHHHHHHcCC-c-eeEEEec
Q 017336          310 TLKGTFFGN------YKPRTDLPSVVDMYMNKQLELEKFITHRIP--FSEINKAFEYMVKGE-G-LRCIISM  371 (373)
Q Consensus       310 ~i~g~~~~~------~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--l~~~~~a~~~l~~~~-~-~k~v~~~  371 (373)
                      .+....+..      ......++.+++++.++++.+.  ....++  ++++++|++.+.+++ . .|+++++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         270 FVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPH--PVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             EEEeeeecccccccccchHHHHHHHHHHHHcCCccCC--CceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            111111110      0111236678888889987765  345566  999999999998887 5 4888864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=3.5e-35  Score=273.16  Aligned_cols=313  Identities=19%  Similarity=0.239  Sum_probs=241.3

Q ss_pred             cchhhhccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 017336            4 TAAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         4 ~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |||+++..+++  ++++++.+.|.++++||+|++.++++|++|+..+.|..+. ..+|.++|||++|+|+++  +++.|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~   78 (325)
T cd05280           1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR   78 (325)
T ss_pred             CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence            68999988886  6999999999999999999999999999999988876532 345789999999999998  456799


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||+|+.....                        .|+                   ...|+|++|+.++++.++++|++
T Consensus        79 ~Gd~V~~~~~~------------------------~g~-------------------~~~g~~~~~~~v~~~~~~~lp~~  115 (325)
T cd05280          79 EGDEVLVTGYD------------------------LGM-------------------NTDGGFAEYVRVPADWVVPLPEG  115 (325)
T ss_pred             CCCEEEEcccc------------------------cCC-------------------CCCceeEEEEEEchhhEEECCCC
Confidence            99999964210                        011                   11369999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhcc--CCC-CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce
Q 017336          161 APLDKVCILSCGVSTGLGATLNVA--KPE-RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  236 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~--~~~-~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~  236 (373)
                      +++++++.+++.+.+||.++....  ++. .+++|||+|+ |.+|++++|+|+.+|+ +|+++++++++++.++++|++.
T Consensus       116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~  194 (325)
T cd05280         116 LSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASE  194 (325)
T ss_pred             CCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcE
Confidence            999999999999999999875543  335 3579999998 9999999999999999 6999999999999999999988


Q ss_pred             eecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEe
Q 017336          237 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTF  315 (373)
Q Consensus       237 vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~  315 (373)
                      +++....   .....+....+++|++||++|+ ..+..++++++++ |+++.+|...... .......+ .++.++.+..
T Consensus       195 ~~~~~~~---~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~  268 (325)
T cd05280         195 VLDREDL---LDESKKPLLKARWAGAIDTVGG-DVLANLLKQTKYG-GVVASCGNAAGPE-LTTTVLPFILRGVSLLGID  268 (325)
T ss_pred             EEcchhH---HHHHHHHhcCCCccEEEECCch-HHHHHHHHhhcCC-CEEEEEecCCCCc-cccccchheeeeeEEEEEE
Confidence            8875432   1122222333379999999998 7889999999997 9999998764322 13333334 4888888876


Q ss_pred             ccCCCCC---CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          316 FGNYKPR---TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       316 ~~~~~~~---~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      .......   +.++.+..++..+.   .+.+...|+++++++|++.+.+++. +|+++++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         269 SVNCPMELRKQVWQKLATEWKPDL---LEIVVREISLEELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             eecCchhHHHHHHHHHHHHHhcCC---ccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence            5432211   11233444444442   2347789999999999999988775 4888764

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=9.1e-36  Score=274.59  Aligned_cols=301  Identities=28%  Similarity=0.429  Sum_probs=227.2

Q ss_pred             eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCC----CCCccccccceEEE---EEeC-CCCCCCCCCCEEee
Q 017336           16 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP----LFPRIFGHEAAGVV---ESVG-EGVSDLEVGDHVLP   87 (373)
Q Consensus        16 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~----~~p~i~G~e~~G~V---~~vG-~~v~~~~~Gd~V~~   87 (373)
                      +...+.++|.|++++++|++.++++|+.|++++.|.+...    .+|.+++.++.|.+   ...| ..+..+..||.+..
T Consensus        20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~   99 (347)
T KOG1198|consen   20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA   99 (347)
T ss_pred             EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence            5568999999999999999999999999999999877654    36766666665553   3333 22334555555542


Q ss_pred             cCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchhhh
Q 017336           88 VFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVC  167 (373)
Q Consensus        88 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa  167 (373)
                      .                                                 ...|+|+||+.+|+..++++|++++++++|
T Consensus       100 ~-------------------------------------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa  130 (347)
T KOG1198|consen  100 F-------------------------------------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAA  130 (347)
T ss_pred             c-------------------------------------------------cCCCceeeEEEcchhhccCCCCccChhhhh
Confidence            2                                                 123699999999999999999999999999


Q ss_pred             hcccchhhhhhhhhhcc------CCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          168 ILSCGVSTGLGATLNVA------KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       168 ~~~~~~~ta~~~l~~~~------~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      ++|.+..|||.++...+      +.+++++|||+|+ |++|++++|+|+..|+ ..+++.+++++.++++++|++.++|+
T Consensus       131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy  209 (347)
T KOG1198|consen  131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY  209 (347)
T ss_pred             cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence            99999999999999988      8999999999976 8999999999999996 45555589999999999999999999


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCC-ceeeccchh-hcccce-----EEE
Q 017336          241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPIN-VLNERT-----LKG  313 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~~-~~~~~~-----i~g  313 (373)
                      ++.+  +.+.++..++++||+||||+|+ ........++... |+...++..... ......... ..+.+.     +.+
T Consensus       210 ~~~~--~~e~~kk~~~~~~DvVlD~vg~-~~~~~~~~~l~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (347)
T KOG1198|consen  210 KDEN--VVELIKKYTGKGVDVVLDCVGG-STLTKSLSCLLKG-GGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKG  285 (347)
T ss_pred             CCHH--HHHHHHhhcCCCccEEEECCCC-CccccchhhhccC-CceEEEEeccccccccccccchhhhhhhhheeeeeec
Confidence            9976  9999999884599999999999 4667777888875 754444443311 111111000 011111     111


Q ss_pred             Ee---ccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336          314 TF---FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       314 ~~---~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                      ..   .......+.+..+.+++.++++  ++.+.+.||++++.+|++.+.+++. +|+++.++
T Consensus       286 ~~~~~~~~~~~~~~l~~l~~~ie~gki--kp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~  346 (347)
T KOG1198|consen  286 VNYRWLYFVPSAEYLKALVELIEKGKI--KPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD  346 (347)
T ss_pred             cceeeeeecCCHHHHHHHHHHHHcCcc--cCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence            10   0111223457888999999955  5568999999999999999988664 69998875

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.7e-34  Score=267.08  Aligned_cols=297  Identities=25%  Similarity=0.357  Sum_probs=239.4

Q ss_pred             eEEEEeecCCCCCCeEEEEEeeeecCccccccc-ccCCCC--CCCCccccccceEEEEEeCCCCCCCCCCCEEeecCcCC
Q 017336           16 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFW-ESKGQT--PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE   92 (373)
Q Consensus        16 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~-~g~~~~--~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~   92 (373)
                      +++.+++.|+++++||+|++.++++|++|+..+ .+..+.  ..+|.++|+|++|+|+++|++++.+++||+|+...   
T Consensus         7 ~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~---   83 (312)
T cd08269           7 FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS---   83 (312)
T ss_pred             eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec---
Confidence            899999999999999999999999999999877 654321  22478899999999999999999999999998541   


Q ss_pred             CCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchhhhhcccc
Q 017336           93 CGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCG  172 (373)
Q Consensus        93 ~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~  172 (373)
                                                                     .|+|++|+.++++.++++|+++  ..++.+..+
T Consensus        84 -----------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~  114 (312)
T cd08269          84 -----------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQAFPGEP  114 (312)
T ss_pred             -----------------------------------------------CCcceeeEEEchhheEECCCch--hhhHHhhhh
Confidence                                                           2589999999999999999998  233322367


Q ss_pred             hhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHH
Q 017336          173 VSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA  252 (373)
Q Consensus       173 ~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~  252 (373)
                      ++++++++. ...++++++|||+|+|.+|.+++|+|+++|++.|+++.+++++.++++++|++.+++....+  +.+.+.
T Consensus       115 ~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~l~  191 (312)
T cd08269         115 LGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSEA--IVERVR  191 (312)
T ss_pred             HHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCCcC--HHHHHH
Confidence            888998765 78899999999998899999999999999994489998899999999999998888765544  778888


Q ss_pred             HHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCCC-CCCCHHHHH
Q 017336          253 EMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYK-PRTDLPSVV  329 (373)
Q Consensus       253 ~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~-~~~~~~~~~  329 (373)
                      +.+++ ++|+++||+|+......++++|+++ |+++.+|... .....+.... ..++..+.++...... ..+.+++++
T Consensus       192 ~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (312)
T cd08269         192 ELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAV  269 (312)
T ss_pred             HHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHH
Confidence            87776 8999999998867889999999997 9999998654 2222222222 3366777665432221 124688899


Q ss_pred             HHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc--eeEEE
Q 017336          330 DMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG--LRCII  369 (373)
Q Consensus       330 ~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~--~k~v~  369 (373)
                      +++.++.+.+..++.+.|+++++++|++.+.+++.  +|+++
T Consensus       270 ~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         270 KLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             HHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence            99999988764456788999999999999988863  58876

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=6.8e-35  Score=270.96  Aligned_cols=298  Identities=21%  Similarity=0.325  Sum_probs=247.1

Q ss_pred             eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCCCCCEEeecCcCCCC
Q 017336           16 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECG   94 (373)
Q Consensus        16 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~   94 (373)
                      +++++.+.|.+.+++|+|++.++++|+.|+..+.+.... ..+|.++|+|++|+|+.+|++++.+++||+|++.+.    
T Consensus        14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----   89 (323)
T cd05282          14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG----   89 (323)
T ss_pred             EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence            667788888999999999999999999999887765432 346789999999999999999999999999996520    


Q ss_pred             CCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchhhhhcccchh
Q 017336           95 DCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS  174 (373)
Q Consensus        95 ~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~  174 (373)
                                                                   .|+|++|+.++.+.++++|+++++.+++.+++.+.
T Consensus        90 ---------------------------------------------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~  124 (323)
T cd05282          90 ---------------------------------------------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPL  124 (323)
T ss_pred             ---------------------------------------------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHH
Confidence                                                         25899999999999999999999999999999999


Q ss_pred             hhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHH
Q 017336          175 TGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE  253 (373)
Q Consensus       175 ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~  253 (373)
                      +||+++...+.+.++++|||+|+ |.+|++++++|+++|+ +++++.+++++.+.++++|++.++++...+  +.+.+.+
T Consensus       125 ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~  201 (323)
T cd05282         125 TAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSPED--LAQRVKE  201 (323)
T ss_pred             HHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccchh--HHHHHHH
Confidence            99999877788899999999987 8999999999999999 788888888999999999999888876544  7777888


Q ss_pred             HcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc-ccceEEEEeccCCCC-------CCC
Q 017336          254 MTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKP-------RTD  324 (373)
Q Consensus       254 ~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~-------~~~  324 (373)
                      .+++ ++|++|||+|+ .....++++++++ |+++.+|..... ...+....+. ++.++.+.....+..       .+.
T Consensus       202 ~~~~~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (323)
T cd05282         202 ATGGAGARLALDAVGG-ESATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQET  278 (323)
T ss_pred             HhcCCCceEEEECCCC-HHHHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHH
Confidence            8776 89999999998 5567889999997 999999876533 3334444444 788888876544321       124


Q ss_pred             HHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336          325 LPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  370 (373)
Q Consensus       325 ~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~  370 (373)
                      +.++++++.++.+.+.  +.+.|+++++++|++.+.+++. .|++++
T Consensus       279 ~~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         279 FAEVIKLVEAGVLTTP--VGAKFPLEDFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             HHHHHHHHhCCCcccC--ccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence            6778888889877643  6788999999999999987765 477753

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=7.8e-35  Score=268.47  Aligned_cols=297  Identities=25%  Similarity=0.310  Sum_probs=239.3

Q ss_pred             cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 017336            4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   81 (373)
Q Consensus         4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   81 (373)
                      |||+++...+ |  +++++.+.|.++++||+|++.++++|+.|+....+    ...|.++|+|++|+|+++|++++.|++
T Consensus         1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~----~~~~~~~g~e~~G~v~~~G~~v~~~~~   75 (305)
T cd08270           1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAE----RPDGAVPGWDAAGVVERAAADGSGPAV   75 (305)
T ss_pred             CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhcc----CCCCCcccceeEEEEEEeCCCCCCCCC
Confidence            5888887654 3  67779999999999999999999999999987652    223678999999999999999999999


Q ss_pred             CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336           82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  161 (373)
Q Consensus        82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~  161 (373)
                      ||+|+...                                                 ..|+|++|+.++++.++++|+++
T Consensus        76 Gd~V~~~~-------------------------------------------------~~g~~~~~~~v~~~~~~~ip~~~  106 (305)
T cd08270          76 GARVVGLG-------------------------------------------------AMGAWAELVAVPTGWLAVLPDGV  106 (305)
T ss_pred             CCEEEEec-------------------------------------------------CCcceeeEEEEchHHeEECCCCC
Confidence            99998541                                                 12599999999999999999999


Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      ++.+++++++.+.|||+++...... ++++|+|+|+ |.+|++++++|+.+|+ +|+.+++++++.+.++++|++.+++.
T Consensus       107 ~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  184 (305)
T cd08270         107 SFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVG  184 (305)
T ss_pred             CHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec
Confidence            9999999999999999987665544 5999999998 9999999999999999 79999899999999999998765532


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc---ccceEEEEecc
Q 017336          241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL---NERTLKGTFFG  317 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~---~~~~i~g~~~~  317 (373)
                      ..          +..++++|+++|++|+ .....++++++.+ |+++.+|... ..........+.   ++.++.++.+.
T Consensus       185 ~~----------~~~~~~~d~vl~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (305)
T cd08270         185 GS----------ELSGAPVDLVVDSVGG-PQLARALELLAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTFFLY  251 (305)
T ss_pred             cc----------cccCCCceEEEECCCc-HHHHHHHHHhcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEEEcc
Confidence            22          1122479999999998 5789999999997 9999998754 222222333232   47788877654


Q ss_pred             C-CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          318 N-YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       318 ~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      . ....+.+..+++++.++++.+.  +.+.++++++++|++.+.+++. +|+++++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         252 DGEPLAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             CHHHHHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            3 1112357788899999988643  6789999999999999987775 4888764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=8.1e-35  Score=269.87  Aligned_cols=311  Identities=23%  Similarity=0.360  Sum_probs=246.8

Q ss_pred             cchhhhccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 017336            4 TAAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   81 (373)
Q Consensus         4 ~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   81 (373)
                      ||++++...+.  .+++.+.+.|.++++||+||+.++++|+.|+....+..+....|.++|||++|+|+++|+  ..+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~   78 (320)
T cd08243           1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP   78 (320)
T ss_pred             CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence            57888776654  267778888889999999999999999999998887655556688999999999999995  57999


Q ss_pred             CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336           82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  161 (373)
Q Consensus        82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~  161 (373)
                      ||+|++...                          |+.                 ....|+|++|+.++++.++++|+++
T Consensus        79 Gd~V~~~~~--------------------------~~~-----------------~~~~g~~~~~~~~~~~~~~~ip~~~  115 (320)
T cd08243          79 GQRVATAMG--------------------------GMG-----------------RTFDGSYAEYTLVPNEQVYAIDSDL  115 (320)
T ss_pred             CCEEEEecC--------------------------CCC-----------------CCCCcccceEEEcCHHHcEeCCCCC
Confidence            999986521                          000                 0012699999999999999999999


Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      ++++++.+++++.|||+++.....+.++++|||+|+ |.+|++++|+|+.+|+ +|+++.+++++.+.++++|++.+++.
T Consensus       116 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  194 (320)
T cd08243         116 SWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID  194 (320)
T ss_pred             CHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec
Confidence            999999999999999999888788999999999997 9999999999999999 79999889999999999999887654


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceee----ccchhhcccceEEEEec
Q 017336          241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM----TKPINVLNERTLKGTFF  316 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~----~~~~~~~~~~~i~g~~~  316 (373)
                       ..+  +.+.+.+. ++++|+++|++|+ ..+..++++++++ |+++.+|.........    .....+.++.++.++..
T Consensus       195 -~~~--~~~~i~~~-~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (320)
T cd08243         195 -DGA--IAEQLRAA-PGGFDKVLELVGT-ATLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSS  268 (320)
T ss_pred             -Ccc--HHHHHHHh-CCCceEEEECCCh-HHHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecch
Confidence             222  66777777 4589999999998 7889999999997 9999999753322111    11111246666666543


Q ss_pred             cCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEEE
Q 017336          317 GNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCII  369 (373)
Q Consensus       317 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v~  369 (373)
                      ... ..+.+.+++++++++.+.+  ...+.|+++++++|++.+.+++.. |+++
T Consensus       269 ~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         269 GDV-PQTPLQELFDFVAAGHLDI--PPSKVFTFDEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             hhh-hHHHHHHHHHHHHCCceec--ccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence            221 1234778889999997754  366889999999999999877653 6654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=4.3e-34  Score=267.16  Aligned_cols=311  Identities=18%  Similarity=0.198  Sum_probs=248.1

Q ss_pred             cchhhhccCCCC-----eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCC
Q 017336            4 TAAAVAWEAGKP-----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD   78 (373)
Q Consensus         4 ~~a~~~~~~~~~-----~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~   78 (373)
                      |||+++.+++.+     +++++.+.|.+.+++|+|++.++++|++|+....+..+...+|.++|||++|+|+++|+++..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~   80 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL   80 (336)
T ss_pred             CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence            588998888764     566678888889999999999999999999887775544456778999999999999999999


Q ss_pred             CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336           79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  158 (373)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p  158 (373)
                      |++||+|+...                            ..                  ...|+|++|+.++.++++++|
T Consensus        81 ~~~Gd~V~~~~----------------------------~~------------------~~~g~~~~~~~v~~~~~~~ip  114 (336)
T cd08252          81 FKVGDEVYYAG----------------------------DI------------------TRPGSNAEYQLVDERIVGHKP  114 (336)
T ss_pred             CCCCCEEEEcC----------------------------CC------------------CCCccceEEEEEchHHeeeCC
Confidence            99999998541                            00                  012599999999999999999


Q ss_pred             CCCCchhhhhcccchhhhhhhhhhccCCCC-----CCEEEEECC-CHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh
Q 017336          159 PLAPLDKVCILSCGVSTGLGATLNVAKPER-----GSSVAVFGL-GAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK  231 (373)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----~~~vlI~G~-g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~  231 (373)
                      +++++++++.+++.+.+||+++.+.+.+.+     +++|+|+|+ |.+|++++|+|+.+| + +|+++++++++.+.+++
T Consensus       115 ~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~  193 (336)
T cd08252         115 KSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKE  193 (336)
T ss_pred             CCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh
Confidence            999999999999999999998877788877     999999986 999999999999999 7 89999899999999999


Q ss_pred             cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccce
Q 017336          232 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERT  310 (373)
Q Consensus       232 lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~  310 (373)
                      +|++.+++... +  +.+.+....++++|++||++|+...+..++++++++ |+++.+|...  .  ......+ .++.+
T Consensus       194 ~g~~~~~~~~~-~--~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~--~--~~~~~~~~~~~~~  265 (336)
T cd08252         194 LGADHVINHHQ-D--LAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ--E--PLDLGPLKSKSAS  265 (336)
T ss_pred             cCCcEEEeCCc-c--HHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC--C--cccchhhhcccce
Confidence            99988887653 2  656666443348999999999767889999999997 9999998652  1  2222333 46777


Q ss_pred             EEEEeccCCC--C-------CCCHHHHHHHHHcCCCCCCCc-eeeeeccccHHHHHHHHHcCCce-eEEE
Q 017336          311 LKGTFFGNYK--P-------RTDLPSVVDMYMNKQLELEKF-ITHRIPFSEINKAFEYMVKGEGL-RCII  369 (373)
Q Consensus       311 i~g~~~~~~~--~-------~~~~~~~~~~l~~~~l~~~~~-~~~~~~l~~~~~a~~~l~~~~~~-k~v~  369 (373)
                      +.+..+....  .       .+.+.++++++.++.+.+... ....++++++++|++.+.++... |+++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~  335 (336)
T cd08252         266 FHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVL  335 (336)
T ss_pred             EEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEe
Confidence            7765543211  0       123677888999997764311 12457999999999999887754 7765

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=3.4e-34  Score=266.74  Aligned_cols=314  Identities=19%  Similarity=0.205  Sum_probs=237.8

Q ss_pred             cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCC-CCCCCCccccccceEEEEEeCCCCCCCC
Q 017336            4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-QTPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-~~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |||+++...+++  +++++.+.|.|+++||+||+.++++|++|.....+.+ ....+|.++|||++|+|+++|  +..|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~   78 (326)
T cd08289           1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK   78 (326)
T ss_pred             CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence            789998887764  7789999999999999999999999999987654322 223458899999999999954  56799


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||+|+..+..                        .|.                   ...|+|++|+.++++.++++|++
T Consensus        79 ~Gd~V~~~~~~------------------------~~~-------------------~~~g~~~~~~~v~~~~~~~~p~~  115 (326)
T cd08289          79 PGDEVIVTSYD------------------------LGV-------------------SHHGGYSEYARVPAEWVVPLPKG  115 (326)
T ss_pred             CCCEEEEcccc------------------------cCC-------------------CCCCcceeEEEEcHHHeEECCCC
Confidence            99999865310                        010                   12369999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhc--cC-CCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce
Q 017336          161 APLDKVCILSCGVSTGLGATLNV--AK-PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  236 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~--~~-~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~  236 (373)
                      +++++++.+++.+.|||.++...  .. ...+++|||+|+ |.+|++++|+|+++|+ +|+++++++++.+.++++|++.
T Consensus       116 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~  194 (326)
T cd08289         116 LTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKE  194 (326)
T ss_pred             CCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCE
Confidence            99999999999999999876533  23 345789999998 9999999999999999 7999989999999999999988


Q ss_pred             eecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEe
Q 017336          237 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTF  315 (373)
Q Consensus       237 vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~  315 (373)
                      +++.++.   ..+.+.+..++++|++||++|+ ..+..++++++++ |+++.+|.... .........+ .++.++.+..
T Consensus       195 v~~~~~~---~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~  268 (326)
T cd08289         195 VIPREEL---QEESIKPLEKQRWAGAVDPVGG-KTLAYLLSTLQYG-GSVAVSGLTGG-GEVETTVFPFILRGVNLLGID  268 (326)
T ss_pred             EEcchhH---HHHHHHhhccCCcCEEEECCcH-HHHHHHHHHhhcC-CEEEEEeecCC-CCCCcchhhhhhccceEEEEE
Confidence            8876542   2344555544489999999998 7889999999997 99999997632 2223223333 5888888865


Q ss_pred             ccCCCCCCCHHHHHHHHHcCCCC---CCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          316 FGNYKPRTDLPSVVDMYMNKQLE---LEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       316 ~~~~~~~~~~~~~~~~l~~~~l~---~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      ..... .....++++.+.. .+.   ....+.+.|+++++.+|++.+.+++. .|+++++
T Consensus       269 ~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         269 SVECP-MELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             eEecC-chHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence            32211 1122333333332 221   12235899999999999999988775 4888763

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=8.5e-34  Score=263.75  Aligned_cols=311  Identities=19%  Similarity=0.234  Sum_probs=239.4

Q ss_pred             chhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCCC
Q 017336            5 AAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV   81 (373)
Q Consensus         5 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~   81 (373)
                      ||+++...+.+  +++++.|.|.++++||+||+.++++|++|+....|.++. ..+|.++|||++|+|+.  +++..|++
T Consensus         1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~   78 (323)
T TIGR02823         1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE   78 (323)
T ss_pred             CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence            57777777775  689999999999999999999999999999888776532 34588999999999998  56678999


Q ss_pred             CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336           82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  161 (373)
Q Consensus        82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~  161 (373)
                      ||+|++.+..      .                  |                   ....|+|++|+.++++.++++|+++
T Consensus        79 Gd~V~~~~~~------~------------------~-------------------~~~~g~~~~~~~~~~~~~~~iP~~~  115 (323)
T TIGR02823        79 GDEVIVTGYG------L------------------G-------------------VSHDGGYSQYARVPADWLVPLPEGL  115 (323)
T ss_pred             CCEEEEccCC------C------------------C-------------------CCCCccceEEEEEchhheEECCCCC
Confidence            9999865210      0                  0                   0013699999999999999999999


Q ss_pred             Cchhhhhcccchhhhhhhhhhc--cCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee
Q 017336          162 PLDKVCILSCGVSTGLGATLNV--AKPERGS-SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF  237 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~--~~~~~~~-~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v  237 (373)
                      ++++++.+++.+.+|+.++...  +.+.+++ +|||+|+ |.+|++++++|+.+|+ +++++..++++++.++++|++.+
T Consensus       116 ~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~  194 (323)
T TIGR02823       116 SLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEV  194 (323)
T ss_pred             CHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEE
Confidence            9999999999999998875433  4478898 9999997 9999999999999999 67777788888899999999888


Q ss_pred             ecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEec
Q 017336          238 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFF  316 (373)
Q Consensus       238 i~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~  316 (373)
                      ++..+.+    ..++....+++|+++||+|+ +.+..++++++++ |+++.+|.... .........+ .++.++.+...
T Consensus       195 ~~~~~~~----~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~  267 (323)
T TIGR02823       195 IDREDLS----PPGKPLEKERWAGAVDTVGG-HTLANVLAQLKYG-GAVAACGLAGG-PDLPTTVLPFILRGVSLLGIDS  267 (323)
T ss_pred             EccccHH----HHHHHhcCCCceEEEECccH-HHHHHHHHHhCCC-CEEEEEcccCC-CCccccHHHHhhcceEEEEEec
Confidence            8764422    23444554579999999998 5788999999997 99999997642 2222222333 57888888654


Q ss_pred             cCCCCC---CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEEEec
Q 017336          317 GNYKPR---TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCIISM  371 (373)
Q Consensus       317 ~~~~~~---~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v~~~  371 (373)
                      ......   +.+..+.+++..+.+..   +.+.|+++++++|++.+.+++.. |+++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~a~~~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       268 VYCPMALREAAWQRLATDLKPRNLES---ITREITLEELPEALEQILAGQHRGRTVVDV  323 (323)
T ss_pred             cccCchhHHHHHHHHHHHhhcCCCcC---ceeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence            321111   12445555666665532   35689999999999999887754 888753

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=4.1e-34  Score=268.83  Aligned_cols=308  Identities=22%  Similarity=0.329  Sum_probs=237.4

Q ss_pred             cchhhhccCCCC---eEEEEeecCCC-CCCeEEEEEeeeecCcccccccccCCC---------------CCCCCcccccc
Q 017336            4 TAAAVAWEAGKP---LIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQ---------------TPLFPRIFGHE   64 (373)
Q Consensus         4 ~~a~~~~~~~~~---~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~---------------~~~~p~i~G~e   64 (373)
                      |||+++++++++   +++++.++|.| +++||+|+++++++|++|+....|...               ...+|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e   80 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD   80 (350)
T ss_pred             CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence            788888888875   88999999999 499999999999999999988776421               24568899999


Q ss_pred             ceEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCccee
Q 017336           65 AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFS  144 (373)
Q Consensus        65 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a  144 (373)
                      ++|+|+.+|++++.+++||+|+..+..                                              ...|+|+
T Consensus        81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~----------------------------------------------~~~g~~~  114 (350)
T cd08248          81 CSGVVVDIGSGVKSFEIGDEVWGAVPP----------------------------------------------WSQGTHA  114 (350)
T ss_pred             eEEEEEecCCCcccCCCCCEEEEecCC----------------------------------------------CCCccce
Confidence            999999999999999999999864210                                              1236999


Q ss_pred             eEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCC----CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE
Q 017336          145 EYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER----GSSVAVFGL-GAVGLAAAEGARIAGASRIIGV  219 (373)
Q Consensus       145 ~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~----~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~  219 (373)
                      +|+.++++.++++|++++++.++.+++.+.|||+++.+.+.+.+    +++|+|+|+ |.+|++++++|+.+|+ +|+++
T Consensus       115 ~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~  193 (350)
T cd08248         115 EYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTT  193 (350)
T ss_pred             eEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEE
Confidence            99999999999999999999999999999999998777777654    999999986 9999999999999999 67777


Q ss_pred             cCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCce--
Q 017336          220 DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV--  297 (373)
Q Consensus       220 ~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~--  297 (373)
                      .++ ++.+.++++|.+.+++....+  +.+.+...  +++|++||++|+ .....++++++++ |+++.+|.......  
T Consensus       194 ~~~-~~~~~~~~~g~~~~~~~~~~~--~~~~l~~~--~~vd~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~  266 (350)
T cd08248         194 CST-DAIPLVKSLGADDVIDYNNED--FEEELTER--GKFDVILDTVGG-DTEKWALKLLKKG-GTYVTLVSPLLKNTDK  266 (350)
T ss_pred             eCc-chHHHHHHhCCceEEECCChh--HHHHHHhc--CCCCEEEECCCh-HHHHHHHHHhccC-CEEEEecCCccccccc
Confidence            654 677888999998888765533  54444332  379999999998 4888999999997 99999986431111  


Q ss_pred             eec--c----chhhc-c-------cceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC
Q 017336          298 FMT--K----PINVL-N-------ERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE  363 (373)
Q Consensus       298 ~~~--~----~~~~~-~-------~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~  363 (373)
                      ...  .    ...+. .       ...+....  .....+.+.++++++.++.+.+  ++++.|+++++++|++.+.+++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~  342 (350)
T cd08248         267 LGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGF--FSPSGSALDELAKLVEDGKIKP--VIDKVFPFEEVPEAYEKVESGH  342 (350)
T ss_pred             ccccchhhhhHHHHHHHHHHHHhcCCCeeEEE--ECCCHHHHHHHHHHHhCCCEec--ccceeecHHHHHHHHHHHhcCC
Confidence            011  0    00010 0       00000000  0111235788999999997653  3678999999999999998776


Q ss_pred             c-eeEEE
Q 017336          364 G-LRCII  369 (373)
Q Consensus       364 ~-~k~v~  369 (373)
                      . .|+++
T Consensus       343 ~~~~vv~  349 (350)
T cd08248         343 ARGKTVI  349 (350)
T ss_pred             CceEEEe
Confidence            5 47765

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=9e-33  Score=255.51  Aligned_cols=308  Identities=25%  Similarity=0.318  Sum_probs=247.3

Q ss_pred             chhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            5 AAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         5 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      ||+.+...+.+  +++.+.+.|.++++||+|+|.++++|+.|+....+..+. .+|.++|||++|+|+.+|++++.+++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G   79 (320)
T cd05286           1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG   79 (320)
T ss_pred             CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence            45555555543  567777777889999999999999999999887775443 457789999999999999999999999


Q ss_pred             CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336           83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  162 (373)
Q Consensus        83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~  162 (373)
                      |+|++..                                                 ..|+|++|+.++.+.++++|++++
T Consensus        80 ~~V~~~~-------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~  110 (320)
T cd05286          80 DRVAYAG-------------------------------------------------PPGAYAEYRVVPASRLVKLPDGIS  110 (320)
T ss_pred             CEEEEec-------------------------------------------------CCCceeEEEEecHHHceeCCCCCC
Confidence            9998541                                                 025899999999999999999999


Q ss_pred             chhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336          163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  241 (373)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~  241 (373)
                      ..+++.+++.+.++|+++.+...+.++++|||+|+ |.+|++++++++.+|+ .|+++++++++.+.++++|++.+++..
T Consensus       111 ~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~  189 (320)
T cd05286         111 DETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR  189 (320)
T ss_pred             HHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC
Confidence            99999999899999998877888999999999996 9999999999999999 789998999999999999998887765


Q ss_pred             CCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEeccCC
Q 017336          242 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNY  319 (373)
Q Consensus       242 ~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~  319 (373)
                      ..+  +.+.++..+.+ ++|++++|+++ .....++++++++ |+++.+|..... ...+....+ .+++++.+......
T Consensus       190 ~~~--~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  264 (320)
T cd05286         190 DED--FVERVREITGGRGVDVVYDGVGK-DTFEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFHY  264 (320)
T ss_pred             chh--HHHHHHHHcCCCCeeEEEECCCc-HhHHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhhh
Confidence            543  77778777766 89999999998 6888999999997 999999875422 222223333 46777765443222


Q ss_pred             CCC-----CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336          320 KPR-----TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  370 (373)
Q Consensus       320 ~~~-----~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~  370 (373)
                      ...     +.+.++++++.++.+.+.  ..+.|+++++++|++.+.++.. .|++++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  319 (320)
T cd05286         265 IATREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKTTGKLLLI  319 (320)
T ss_pred             cCCHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCCCceEEEe
Confidence            111     124567788888877643  6688999999999999987775 477765

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=7e-33  Score=256.97  Aligned_cols=315  Identities=27%  Similarity=0.359  Sum_probs=250.7

Q ss_pred             cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCCC
Q 017336            4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      ||++++...+.+  +++.+.+.|.+.+++|+|++.++++|++|+....|..+ ....|.++|||++|+|+++|++++.|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~   80 (325)
T cd08253           1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK   80 (325)
T ss_pred             CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence            578887776543  78889999999999999999999999999988777543 345788999999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||+|+..+.                          |..                  ...|++++|+.++++.++++|++
T Consensus        81 ~Gd~v~~~~~--------------------------~~~------------------~~~g~~~~~~~~~~~~~~~ip~~  116 (325)
T cd08253          81 VGDRVWLTNL--------------------------GWG------------------RRQGTAAEYVVVPADQLVPLPDG  116 (325)
T ss_pred             CCCEEEEecc--------------------------ccC------------------CCCcceeeEEEecHHHcEeCCCC
Confidence            9999986531                          000                  01368999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      +++.+++.+++++.+||+++.....+.++++|+|+|+ |.+|++++++++.+|+ +|+++++++++.+.+.++|++.+++
T Consensus       117 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  195 (325)
T cd08253         117 VSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFN  195 (325)
T ss_pred             CCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEe
Confidence            9999999999999999999877789999999999986 9999999999999998 7999989999999999999988877


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEecc
Q 017336          240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFG  317 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~  317 (373)
                      ....+  +.+.+.+.+.+ ++|++++++++ ......+++++++ |+++.+|......  ...... +.++.++.+....
T Consensus       196 ~~~~~--~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  269 (325)
T cd08253         196 YRAED--LADRILAATAGQGVDVIIEVLAN-VNLAKDLDVLAPG-GRIVVYGSGGLRG--TIPINPLMAKEASIRGVLLY  269 (325)
T ss_pred             CCCcC--HHHHHHHHcCCCceEEEEECCch-HHHHHHHHhhCCC-CEEEEEeecCCcC--CCChhHHHhcCceEEeeehh
Confidence            66544  66777777665 89999999998 5678889999997 9999998754211  222222 3466667665533


Q ss_pred             CCCCC---CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          318 NYKPR---TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       318 ~~~~~---~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      .....   +.+..+.+++.++.+..  ...+.|++++++++++.+.++.. .|+++++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         270 TATPEERAAAAEAIAAGLADGALRP--VIAREYPLEEAAAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             hcCHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            22111   12445566777776543  36788999999999999987664 4887753

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=6.6e-33  Score=257.86  Aligned_cols=312  Identities=17%  Similarity=0.195  Sum_probs=241.6

Q ss_pred             cchhhhccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCCC
Q 017336            4 TAAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         4 ~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |||+++.+++.  .+++++.|.|.|+++||+|++.++++|++|+....+.++ ...+|.++|||++|+|++  ++++.++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~   78 (324)
T cd08288           1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK   78 (324)
T ss_pred             CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence            78999988775  388999999999999999999999999999988777543 234578899999999998  7778899


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||+|++....              .|                             ....|+|++|++++.+.++++|++
T Consensus        79 ~Gd~V~~~~~~--------------~~-----------------------------~~~~g~~~~~~~v~~~~~~~lp~~  115 (324)
T cd08288          79 PGDRVVLTGWG--------------VG-----------------------------ERHWGGYAQRARVKADWLVPLPEG  115 (324)
T ss_pred             CCCEEEECCcc--------------CC-----------------------------CCCCCcceeEEEEchHHeeeCCCC
Confidence            99999864210              00                             001368999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhh--hccCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce
Q 017336          161 APLDKVCILSCGVSTGLGATL--NVAKPE-RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  236 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~--~~~~~~-~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~  236 (373)
                      +++++++.++..+++|+.++.  +..... ++++|||+|+ |.+|++++|+|+.+|+ +|+++..++++.+.++++|++.
T Consensus       116 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~  194 (324)
T cd08288         116 LSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASE  194 (324)
T ss_pred             CCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCE
Confidence            999999999989999887643  123444 6789999998 9999999999999999 7888888999999999999988


Q ss_pred             eecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEe
Q 017336          237 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTF  315 (373)
Q Consensus       237 vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~  315 (373)
                      ++++++.    ...++..+.+++|.++|++++ .....++..++.+ |+++.+|.... .........+ .++.++.+..
T Consensus       195 ~~~~~~~----~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~  267 (324)
T cd08288         195 IIDRAEL----SEPGRPLQKERWAGAVDTVGG-HTLANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLGID  267 (324)
T ss_pred             EEEcchh----hHhhhhhccCcccEEEECCcH-HHHHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEEEE
Confidence            8877543    224555555578999999997 5677888889986 99999987532 1122233334 5888888875


Q ss_pred             ccCCCC---CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEEEec
Q 017336          316 FGNYKP---RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCIISM  371 (373)
Q Consensus       316 ~~~~~~---~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v~~~  371 (373)
                      ......   .+.+..+++++.++.+.+   +.+.++++++++|++.+.+++.. |+++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         268 SVMAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             eecccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence            432221   123555666777776642   46899999999999999888754 888764

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4.4e-33  Score=251.87  Aligned_cols=268  Identities=32%  Similarity=0.502  Sum_probs=220.0

Q ss_pred             eEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCc
Q 017336           30 EVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD  108 (373)
Q Consensus        30 evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~  108 (373)
                      ||+|+|.++++|+.|+....+..+ ...+|.++|+|++|+|+++|++++.|++||+|+..+..+|++|++|..    .|+
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~   76 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP   76 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence            689999999999999998887654 345678999999999999999999999999999999999999999997    666


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCC
Q 017336          109 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  188 (373)
Q Consensus       109 ~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~  188 (373)
                      ...+.   +                   ....|+|++|+.++.+.++++|+++++++++.+++++.+||+++.....+.+
T Consensus        77 ~~~~~---~-------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~  134 (271)
T cd05188          77 GGGIL---G-------------------EGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKP  134 (271)
T ss_pred             CCCEe---c-------------------cccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCC
Confidence            54433   1                   1124699999999999999999999999999999999999999877777799


Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCC-CccEEEEccC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG  267 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g  267 (373)
                      +++|||+|+|.+|++++++++..|. +|+++++++++.+.++++|++.+++....+  +.+.+. ...+ ++|+++++++
T Consensus       135 ~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~-~~~~~~~d~vi~~~~  210 (271)
T cd05188         135 GDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKEED--LEEELR-LTGGGGADVVIDAVG  210 (271)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCcCC--HHHHHH-HhcCCCCCEEEECCC
Confidence            9999999986699999999999997 899999999999999999988887766544  555555 4444 8999999999


Q ss_pred             ChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCCCCCHHHHHHH
Q 017336          268 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM  331 (373)
Q Consensus       268 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~  331 (373)
                      +......++++++++ |+++.++..............+.+++++.++..+.+   .++++++++
T Consensus       211 ~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  270 (271)
T cd05188         211 GPETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTR---EDFEEALDL  270 (271)
T ss_pred             CHHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCCH---HHHHHHHhh
Confidence            867788999999997 999999876543332223333458899988875432   245555543

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=4.8e-33  Score=259.32  Aligned_cols=304  Identities=19%  Similarity=0.243  Sum_probs=238.5

Q ss_pred             cchhhhccCCC------CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC---CCCCCccccccceEEEEEeCC
Q 017336            4 TAAAVAWEAGK------PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGE   74 (373)
Q Consensus         4 ~~a~~~~~~~~------~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~   74 (373)
                      .||+++...++      .+++++.+.|.+.+++|+||+.++++|+.|.....+...   ....+.++|+|++|+|+++|+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~   81 (329)
T cd05288           2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS   81 (329)
T ss_pred             CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence            35666655442      288899999999999999999999999987655444321   112356789999999999996


Q ss_pred             CCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEec-Cc
Q 017336           75 GVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS-GC  153 (373)
Q Consensus        75 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~-~~  153 (373)
                      +  .+++||+|+..                                                    ++|++|+.+++ +.
T Consensus        82 ~--~~~~Gd~V~~~----------------------------------------------------~~~~~~~~v~~~~~  107 (329)
T cd05288          82 P--DFKVGDLVSGF----------------------------------------------------LGWQEYAVVDGASG  107 (329)
T ss_pred             C--CCCCCCEEecc----------------------------------------------------cceEEEEEecchhh
Confidence            4  79999999843                                                    37999999999 99


Q ss_pred             eEeCCCCCC--chhhhh-cccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH
Q 017336          154 VAKINPLAP--LDKVCI-LSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA  229 (373)
Q Consensus       154 ~~~~p~~~~--~~~aa~-~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~  229 (373)
                      ++++|++++  +.+++. +++++.|||+++.....+.++++|||+|+ |.+|++++|+|+++|+ +|+++++++++.+.+
T Consensus       108 ~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~  186 (329)
T cd05288         108 LRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWL  186 (329)
T ss_pred             cEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence            999999985  445555 88899999999877788999999999986 9999999999999999 899998999999999


Q ss_pred             Hh-cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceee----c-cch
Q 017336          230 KK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM----T-KPI  303 (373)
Q Consensus       230 ~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~----~-~~~  303 (373)
                      ++ +|++.++++.+.+  +.+.+.+.+++++|++|||+|+ ..+..++++++++ |+++.+|.........    + ...
T Consensus       187 ~~~~g~~~~~~~~~~~--~~~~v~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~  262 (329)
T cd05288         187 VEELGFDAAINYKTPD--LAEALKEAAPDGIDVYFDNVGG-EILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGN  262 (329)
T ss_pred             HhhcCCceEEecCChh--HHHHHHHhccCCceEEEEcchH-HHHHHHHHhcCCC-ceEEEEeeccCcccccccccccHHH
Confidence            88 9998888876544  7777777765689999999998 7888999999997 9999998754322211    1 222


Q ss_pred             hhcccceEEEEeccCCCC--CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEE
Q 017336          304 NVLNERTLKGTFFGNYKP--RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCI  368 (373)
Q Consensus       304 ~~~~~~~i~g~~~~~~~~--~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v  368 (373)
                      .+.++.++.++.+.....  .+.+.++++++.++.+.+.  ....+++++++++++.+.+++.. |++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvv  328 (329)
T cd05288         263 IITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYR--EDVVEGLENAPEAFLGLFTGKNTGKLV  328 (329)
T ss_pred             HhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCcccc--ccccccHHHHHHHHHHHhcCCCcccee
Confidence            345788888766433211  1346778889999987755  34568999999999999877653 665

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=1.2e-32  Score=254.98  Aligned_cols=308  Identities=25%  Similarity=0.348  Sum_probs=248.9

Q ss_pred             cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCCC
Q 017336            4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |||+++.+.+.+  +++.+.+.|.+.+++|+||+.++++|+.|+....+.++ ...+|.++|||++|+|+.+|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (323)
T cd05276           1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK   80 (323)
T ss_pred             CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence            689998876553  77788888888999999999999999999988766543 234678999999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||+|+....                                                 .|+|++|+.++++.++++|++
T Consensus        81 ~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~~p~~  111 (323)
T cd05276          81 VGDRVCALLA-------------------------------------------------GGGYAEYVVVPAGQLLPVPEG  111 (323)
T ss_pred             CCCEEEEecC-------------------------------------------------CCceeEEEEcCHHHhccCCCC
Confidence            9999985410                                                 158999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      +++.+++.++..+.++|+++.+.+.+.++++|+|+|+ |.+|++++++++..|+ +|+++++++++.+.++++|++.+++
T Consensus       112 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (323)
T cd05276         112 LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAIN  190 (323)
T ss_pred             CCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence            9999999999999999999877788999999999997 8999999999999999 7999989999999999999887777


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEecc
Q 017336          240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG  317 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~  317 (373)
                      ....+  +.+.+.+.+.+ ++|+++|+.|+ .....+++++.++ |+++.+|...... .......+ .+++++.++...
T Consensus       191 ~~~~~--~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~~~~~-g~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  265 (323)
T cd05276         191 YRTED--FAEEVKEATGGRGVDVILDMVGG-DYLARNLRALAPD-GRLVLIGLLGGAK-AELDLAPLLRKRLTLTGSTLR  265 (323)
T ss_pred             CCchh--HHHHHHHHhCCCCeEEEEECCch-HHHHHHHHhhccC-CEEEEEecCCCCC-CCCchHHHHHhCCeEEEeecc
Confidence            65543  66667776665 89999999998 5578899999996 9999998754222 22233333 478888887654


Q ss_pred             CCCCC-------CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEE
Q 017336          318 NYKPR-------TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCI  368 (373)
Q Consensus       318 ~~~~~-------~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v  368 (373)
                      .....       +.+.++++++.++++.+  +.++.|+++++++|++.+.++... |++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv  322 (323)
T cd05276         266 SRSLEEKAALAAAFREHVWPLFASGRIRP--VIDKVFPLEEAAEAHRRMESNEHIGKIV  322 (323)
T ss_pred             chhhhccHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHhCCCcceEe
Confidence            32111       12456777888887653  367899999999999999877643 655

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=9.1e-33  Score=256.65  Aligned_cols=310  Identities=24%  Similarity=0.323  Sum_probs=244.6

Q ss_pred             cchhhhccCC--CCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 017336            4 TAAAVAWEAG--KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   81 (373)
Q Consensus         4 ~~a~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   81 (373)
                      |||+++.+++  ..+++++.+.|.+.+++|+|++.++++|++|+....+.......|.++|||++|+|+.+|++++.+++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~   80 (325)
T cd08271           1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV   80 (325)
T ss_pred             CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence            7899998888  35999999999999999999999999999999887765543344778999999999999999999999


Q ss_pred             CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336           82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  161 (373)
Q Consensus        82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~  161 (373)
                      ||+|+.....                                              ...|+|++|+.++++.++++|+++
T Consensus        81 Gd~V~~~~~~----------------------------------------------~~~~~~~s~~~~~~~~~~~ip~~~  114 (325)
T cd08271          81 GDRVAYHASL----------------------------------------------ARGGSFAEYTVVDARAVLPLPDSL  114 (325)
T ss_pred             CCEEEeccCC----------------------------------------------CCCccceeEEEeCHHHeEECCCCC
Confidence            9999965210                                              012589999999999999999999


Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      +..+++.+++.+.+||+++.+.+.+.++++++|+|+ |.+|++++++++..|+ .|+++. ++++.+.++++|++.+++.
T Consensus       115 ~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~  192 (325)
T cd08271         115 SFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDY  192 (325)
T ss_pred             CHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecC
Confidence            999999999999999999878888999999999998 7999999999999999 677775 6778888889999888876


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc-----ccceEEEE
Q 017336          241 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-----NERTLKGT  314 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-----~~~~i~g~  314 (373)
                      ...+  +.+.++....+ ++|++++++++ .....++++++++ |+++.++......  .  ...+.     +.+.+...
T Consensus       193 ~~~~--~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-G~~v~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~  264 (325)
T cd08271         193 NDED--VCERIKEITGGRGVDAVLDTVGG-ETAAALAPTLAFN-GHLVCIQGRPDAS--P--DPPFTRALSVHEVALGAA  264 (325)
T ss_pred             CCcc--HHHHHHHHcCCCCCcEEEECCCc-HhHHHHHHhhccC-CEEEEEcCCCCCc--c--hhHHhhcceEEEEEeccc
Confidence            5544  66777777766 89999999998 4556789999997 9999987543221  1  11122     23333322


Q ss_pred             eccCC-----CCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          315 FFGNY-----KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       315 ~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      .....     ...+.+.++++++.++.+.+  +..+.|+++++.++++.+.++.. .|+++++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         265 HDHGDPAAWQDLRYAGEELLELLAAGKLEP--LVIEVLPFEQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             ccccchhhHHHHHHHHHHHHHHHHCCCeee--ccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence            21111     01123566888888887653  35688999999999999987764 4887763

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=1.5e-32  Score=258.42  Aligned_cols=318  Identities=19%  Similarity=0.269  Sum_probs=235.1

Q ss_pred             cchhhhccCCCCeEEEEeecCCC---CCCeEEEEEeeeecCcccccccccCCCCCC-CCccccccceEEEEEeCCCCC-C
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPP---QAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGHEAAGVVESVGEGVS-D   78 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~---~~~evlV~v~~~~i~~~D~~~~~g~~~~~~-~p~i~G~e~~G~V~~vG~~v~-~   78 (373)
                      +||+++...++++++++++.|.|   ++++|+|++.++++|++|+....+...... .|.++|+|++|+|+++|++++ .
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (352)
T cd08247           1 YKALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASE   80 (352)
T ss_pred             CceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccC
Confidence            47889999988888888888776   899999999999999999887654322222 377899999999999999998 8


Q ss_pred             CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC----ce
Q 017336           79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG----CV  154 (373)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~----~~  154 (373)
                      |++||+|++.....|                                            .+.|+|++|+++++.    .+
T Consensus        81 ~~~Gd~V~~~~~~~~--------------------------------------------~~~g~~~~~~~v~~~~~~~~~  116 (352)
T cd08247          81 WKVGDEVCGIYPHPY--------------------------------------------GGQGTLSQYLLVDPKKDKKSI  116 (352)
T ss_pred             CCCCCEEEEeecCCC--------------------------------------------CCCceeeEEEEEcccccccee
Confidence            999999986532110                                            023699999999987    79


Q ss_pred             EeCCCCCCchhhhhcccchhhhhhhhhhcc-CCCCCCEEEEECC-CHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHh
Q 017336          155 AKINPLAPLDKVCILSCGVSTGLGATLNVA-KPERGSSVAVFGL-GAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK  231 (373)
Q Consensus       155 ~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~-~~~~~~~vlI~G~-g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~  231 (373)
                      +++|+++++.+++.++..+.|||+++.... .++++++|+|+|+ |.+|++++++|+.+|. ..++++. ++++.+.+++
T Consensus       117 ~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~  195 (352)
T cd08247         117 TRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKK  195 (352)
T ss_pred             EECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHH
Confidence            999999999999999999999999877766 7999999999988 7999999999998753 3567775 4555668889


Q ss_pred             cCCceeecCCCCCc--cHHHHHHHHc-CCCccEEEEccCChHhHHHHHHHhh---cCCcEEEEEcCCCCCc-ee------
Q 017336          232 FGVTDFVNTSEHDR--PIQEVIAEMT-NGGVDRSVECTGNIDNMISAFECVH---DGWGVAVLVGVPSKDA-VF------  298 (373)
Q Consensus       232 lg~~~vi~~~~~~~--~~~~~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~---~~~g~~v~~g~~~~~~-~~------  298 (373)
                      +|++.+++.++.+.  .+.+.++..+ ++++|++|||+|+......++++++   ++ |+++.++...... ..      
T Consensus       196 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~~~~~  274 (352)
T cd08247         196 LGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDTFNSW  274 (352)
T ss_pred             hCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchhhhhc
Confidence            99988887655321  1333344444 3389999999998667888999999   97 9999874221110 00      


Q ss_pred             ---eccchhhccc-----ceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 017336          299 ---MTKPINVLNE-----RTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII  369 (373)
Q Consensus       299 ---~~~~~~~~~~-----~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~  369 (373)
                         ......+.+.     ..+.....  ....+.+.++++++.++.+.  +++.+.++++++++|++.+.+++. +|+++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  350 (352)
T cd08247         275 DNPSANARKLFGSLGLWSYNYQFFLL--DPNADWIEKCAELIADGKVK--PPIDSVYPFEDYKEAFERLKSNRAKGKVVI  350 (352)
T ss_pred             cccchhhhhhhhhhcCCCcceEEEEe--cCCHHHHHHHHHHHhCCCeE--eeeccEecHHHHHHHHHHHHcCCCCCcEEE
Confidence               0001111112     22221111  11113467788889898765  336789999999999999988774 58887


Q ss_pred             ec
Q 017336          370 SM  371 (373)
Q Consensus       370 ~~  371 (373)
                      ++
T Consensus       351 ~~  352 (352)
T cd08247         351 KV  352 (352)
T ss_pred             eC
Confidence            63

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.9e-32  Score=255.42  Aligned_cols=305  Identities=22%  Similarity=0.318  Sum_probs=237.3

Q ss_pred             chhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCCC
Q 017336            5 AAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV   81 (373)
Q Consensus         5 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~   81 (373)
                      ||+.+...+.+  +++++.+.|.|.++||+|++.++++|++|+....+..+. ..+|.++|||++|+|+.+|+++..|++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~   81 (331)
T cd08273           2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV   81 (331)
T ss_pred             eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence            67777777654  788899999999999999999999999999888776543 356889999999999999999999999


Q ss_pred             CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336           82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  161 (373)
Q Consensus        82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~  161 (373)
                      ||+|.....                                                 .|+|++|+.++.+.++++|+++
T Consensus        82 Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~  112 (331)
T cd08273          82 GDRVAALTR-------------------------------------------------VGGNAEYINLDAKYLVPVPEGV  112 (331)
T ss_pred             CCEEEEeCC-------------------------------------------------CcceeeEEEechHHeEECCCCC
Confidence            999985420                                                 1589999999999999999999


Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      ++.+++.+++++.+||+++...+.+.++++|+|+|+ |.+|++++++|+.+|+ +|+++.. +++.+.++++|+.. ++.
T Consensus       113 ~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~  189 (331)
T cd08273         113 DAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDY  189 (331)
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcC
Confidence            999999999999999998877788999999999997 9999999999999999 7888877 88889999999754 344


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeecc---------------chhh
Q 017336          241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK---------------PINV  305 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~---------------~~~~  305 (373)
                      ...+  +.+.  ....+++|++++++++ .....++++++++ |+++.+|...........               ....
T Consensus       190 ~~~~--~~~~--~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (331)
T cd08273         190 RTKD--WLPA--MLTPGGVDVVFDGVGG-ESYEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPT  263 (331)
T ss_pred             CCcc--hhhh--hccCCCceEEEECCch-HHHHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcceec
Confidence            3332  3333  2333489999999998 4588999999997 999999876533221111               0111


Q ss_pred             cccceEEEEeccCC----CCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEEE
Q 017336          306 LNERTLKGTFFGNY----KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCII  369 (373)
Q Consensus       306 ~~~~~i~g~~~~~~----~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v~  369 (373)
                      .+..++.+......    ...+.+.++++++.++.+..  .+.+.+++++++++++.+.+++.. |+++
T Consensus       264 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         264 GRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRP--KIAKRLPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             cceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence            12333332222100    01235778889999997753  367889999999999998877654 6654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.4e-32  Score=252.71  Aligned_cols=311  Identities=24%  Similarity=0.324  Sum_probs=247.4

Q ss_pred             cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCCC
Q 017336            4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |||+++...+.+  +++++.+.|.+.+++|+|++.++++|++|+....+... ....|.++|||++|+|+++|+++..|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (326)
T cd08272           1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR   80 (326)
T ss_pred             CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence            689999887765  77888888889999999999999999999988766543 233577899999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||+|+....                          |..                  ...|+|++|+.+++++++++|++
T Consensus        81 ~Gd~V~~~~~--------------------------~~~------------------~~~g~~~~~~~v~~~~~~~~p~~  116 (326)
T cd08272          81 VGDEVYGCAG--------------------------GLG------------------GLQGSLAEYAVVDARLLALKPAN  116 (326)
T ss_pred             CCCEEEEccC--------------------------CcC------------------CCCCceeEEEEecHHHcccCCCC
Confidence            9999996421                          100                  01368999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      +++..++.+++.+.+||+++.+...+.++++++|+|+ |.+|++++++++.+|+ +|+++.++ ++.+.++++|++.+++
T Consensus       117 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~  194 (326)
T cd08272         117 LSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIY  194 (326)
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEe
Confidence            9999999999999999998888899999999999986 9999999999999999 78888887 8889999999987776


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccC
Q 017336          240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN  318 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~  318 (373)
                      ....   +.+.+...+.+ ++|+++|++++ .....++++++++ |+++.++... .  ...... ..++.++.+.....
T Consensus       195 ~~~~---~~~~~~~~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~-~--~~~~~~-~~~~~~~~~~~~~~  265 (326)
T cd08272         195 YRET---VVEYVAEHTGGRGFDVVFDTVGG-ETLDASFEAVALY-GRVVSILGGA-T--HDLAPL-SFRNATYSGVFTLL  265 (326)
T ss_pred             cchh---HHHHHHHhcCCCCCcEEEECCCh-HHHHHHHHHhccC-CEEEEEecCC-c--cchhhH-hhhcceEEEEEccc
Confidence            5432   56667777776 89999999998 6788899999996 9999998653 1  111111 24666766655321


Q ss_pred             -----CC---CCCCHHHHHHHHHcCCCCCCCcee-eeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          319 -----YK---PRTDLPSVVDMYMNKQLELEKFIT-HRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       319 -----~~---~~~~~~~~~~~l~~~~l~~~~~~~-~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                           ..   ..+.+..+++++.++.+..  +++ +.|++++++++++.+.+++. .|+++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         266 PLLTGEGRAHHGEILREAARLVERGQLRP--LLDPRTFPLEEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             ccccccchhhHHHHHHHHHHHHHCCCccc--ccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence                 00   1124667788888887653  334 88999999999999887664 4888764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.4e-31  Score=248.64  Aligned_cols=315  Identities=27%  Similarity=0.383  Sum_probs=248.2

Q ss_pred             cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 017336            4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |||+++...+.+  +++.+.+.|.+++++++|++.++++|+.|+....+.... ..+|.++|||++|+|+.+|+++..|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (328)
T cd08268           1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA   80 (328)
T ss_pred             CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence            678887765543  677788888899999999999999999999887665432 34577899999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||+|+..+...                                            ....|++++|+.++++.++++|++
T Consensus        81 ~Gd~V~~~~~~~--------------------------------------------~~~~g~~~~~~~~~~~~~~~~p~~  116 (328)
T cd08268          81 VGDRVSVIPAAD--------------------------------------------LGQYGTYAEYALVPAAAVVKLPDG  116 (328)
T ss_pred             CCCEEEeccccc--------------------------------------------cCCCccceEEEEechHhcEeCCCC
Confidence            999998653210                                            011368999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      +++.+++.+++.+.+||.++.....+.++++++|+|+ |.+|++++++++..|+ +++++++++++.+.++++|.+.+++
T Consensus       117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  195 (328)
T cd08268         117 LSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIV  195 (328)
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence            9999999999999999999877888999999999987 9999999999999999 7888888899999998899887777


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccch-hhcccceEEEEecc
Q 017336          240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFG  317 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~  317 (373)
                      .....  +.+.+.+.+.+ ++|++++++++ .....++++++++ |+++.+|..... ....... .+.++.++.+..+.
T Consensus       196 ~~~~~--~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~  270 (328)
T cd08268         196 TDEED--LVAEVLRITGGKGVDVVFDPVGG-PQFAKLADALAPG-GTLVVYGALSGE-PTPFPLKAALKKSLTFRGYSLD  270 (328)
T ss_pred             cCCcc--HHHHHHHHhCCCCceEEEECCch-HhHHHHHHhhccC-CEEEEEEeCCCC-CCCCchHHHhhcCCEEEEEecc
Confidence            65543  66677777666 89999999998 7788899999997 999999865431 1122222 35578888776543


Q ss_pred             CCC-CCC----CHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336          318 NYK-PRT----DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  370 (373)
Q Consensus       318 ~~~-~~~----~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~  370 (373)
                      ... ..+    .++.+.+++.++.+..  .....|+++++.++++.+.++.. .|++++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~  327 (328)
T cd08268         271 EITLDPEARRRAIAFILDGLASGALKP--VVDRVFPFDDIVEAHRYLESGQQIGKIVVT  327 (328)
T ss_pred             cccCCHHHHHHHHHHHHHHHHCCCCcC--CcccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence            211 011    2344555566676553  35688999999999999887765 488775

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=100.00  E-value=2.3e-31  Score=246.87  Aligned_cols=311  Identities=23%  Similarity=0.309  Sum_probs=249.5

Q ss_pred             cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 017336            4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |||+.+...+.+  +++.+.+.|.+++++++|++.++++|+.|+....+..+. ..+|.++|||++|+|+.+|+.+..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (325)
T TIGR02824         1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK   80 (325)
T ss_pred             CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence            578887776654  667777777789999999999999999999887665432 34578999999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||+|+....                                                 .|+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~ip~~  111 (325)
T TIGR02824        81 VGDRVCALVA-------------------------------------------------GGGYAEYVAVPAGQVLPVPEG  111 (325)
T ss_pred             CCCEEEEccC-------------------------------------------------CCcceeEEEecHHHcEeCCCC
Confidence            9999985410                                                 158999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      +++.+++.++.++.++|+++.+...+.++++++|+|+ |.+|++++++++.+|+ +|+++.+++++.+.++++|++.+++
T Consensus       112 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (325)
T TIGR02824       112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAIN  190 (325)
T ss_pred             CCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence            9999999999999999998778889999999999997 9999999999999999 7888888898889998999877776


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEecc
Q 017336          240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG  317 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~  317 (373)
                      ....+  +.+.+.....+ ++|++++++|+ .....++++++++ |+++.+|....... ......+ .+++++.+....
T Consensus       191 ~~~~~--~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~  265 (325)
T TIGR02824       191 YREED--FVEVVKAETGGKGVDVILDIVGG-SYLNRNIKALALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGSTLR  265 (325)
T ss_pred             cCchh--HHHHHHHHcCCCCeEEEEECCch-HHHHHHHHhhccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEehh
Confidence            55443  66777777665 89999999998 5788899999997 99999987542221 3333333 588888887754


Q ss_pred             CCCCC-------CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          318 NYKPR-------TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       318 ~~~~~-------~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      .....       ..+.++++++.++.+.+  +.++.|++++++++++.+.++.. .|+++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  325 (325)
T TIGR02824       266 ARPVAEKAAIAAELREHVWPLLASGRVRP--VIDKVFPLEDAAQAHALMESGDHIGKIVLTV  325 (325)
T ss_pred             hcchhhhHHHHHHHHHHHHHHHHCCcccC--ccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence            32111       12355677888887643  36788999999999999887764 4877753

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08251 polyketide_synthase polyketide synthase

Probab=100.00  E-value=2.6e-31  Score=244.22  Aligned_cols=291  Identities=25%  Similarity=0.381  Sum_probs=231.4

Q ss_pred             cCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccC
Q 017336           23 VAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRS  101 (373)
Q Consensus        23 ~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~  101 (373)
                      .|.+.+++++|++.++++|+.|+....+.++. ..+|.++|+|++|+|+++|+++++|++||+|++....          
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~----------   71 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE----------   71 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC----------
Confidence            57789999999999999999999888776542 3568899999999999999999999999999865210          


Q ss_pred             CCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhh
Q 017336          102 DVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL  181 (373)
Q Consensus       102 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~  181 (373)
                                                           ..|+|++|+.++++.++++|+++++++++.++..+.+||+++ 
T Consensus        72 -------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-  113 (303)
T cd08251          72 -------------------------------------SMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-  113 (303)
T ss_pred             -------------------------------------CCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-
Confidence                                                 135999999999999999999999999999999999999986 


Q ss_pred             hccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCC-Cc
Q 017336          182 NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GV  259 (373)
Q Consensus       182 ~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~-~~  259 (373)
                      +...++++++++|+|+ |.+|++++|+++.+|+ +|+++.+++++.+.++++|++.+++....+  +.+.+...+++ ++
T Consensus       114 ~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~~  190 (303)
T cd08251         114 ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVEED--FEEEIMRLTGGRGV  190 (303)
T ss_pred             HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCCcc--HHHHHHHHcCCCCc
Confidence            5788999999999975 9999999999999999 799998999999999999998888776544  77778777776 89


Q ss_pred             cEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCC---C---CCCCHHHHHHHHH
Q 017336          260 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY---K---PRTDLPSVVDMYM  333 (373)
Q Consensus       260 d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~---~~~~~~~~~~~l~  333 (373)
                      |+++|++++ .....++++++++ |+++.+|..............+.++..+....+...   .   ..+.+.++++++.
T Consensus       191 d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (303)
T cd08251         191 DVVINTLSG-EAIQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVE  268 (303)
T ss_pred             eEEEECCcH-HHHHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHH
Confidence            999999976 7788899999997 999998765422112222222333333333222110   0   0123667788888


Q ss_pred             cCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEE
Q 017336          334 NKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCI  368 (373)
Q Consensus       334 ~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v  368 (373)
                      ++.+..  +.++.|++++++++++.+.+++.. |++
T Consensus       269 ~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~iv  302 (303)
T cd08251         269 EGELRP--TVSRIFPFDDIGEAYRYLSDRENIGKVV  302 (303)
T ss_pred             CCCccC--CCceEEcHHHHHHHHHHHHhCCCcceEe
Confidence            887653  367889999999999999877654 655

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=8.3e-31  Score=242.80  Aligned_cols=309  Identities=27%  Similarity=0.473  Sum_probs=247.3

Q ss_pred             cchhhhccCCCC--eEEEEeecCCCC-CCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCC
Q 017336            4 TAAAVAWEAGKP--LIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDL   79 (373)
Q Consensus         4 ~~a~~~~~~~~~--~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~   79 (373)
                      |+|+++...+.+  +++.+.+ |.+. +++++|++.++++|++|+....+.... ...|.++|+|++|+|+.+|+++..+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~   79 (323)
T cd08241           1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF   79 (323)
T ss_pred             CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence            688888755443  6777777 7666 499999999999999999887765432 3346689999999999999999999


Q ss_pred             CCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC
Q 017336           80 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP  159 (373)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~  159 (373)
                      ++||+|+..+                                                 ..|+|++|+.++.+.++++|+
T Consensus        80 ~~G~~V~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~~ip~  110 (323)
T cd08241          80 KVGDRVVALT-------------------------------------------------GQGGFAEEVVVPAAAVFPLPD  110 (323)
T ss_pred             CCCCEEEEec-------------------------------------------------CCceeEEEEEcCHHHceeCCC
Confidence            9999999541                                                 025899999999999999999


Q ss_pred             CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee
Q 017336          160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  238 (373)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi  238 (373)
                      ++++.+++.+...+.+||.++.+...+.++++|+|+|+ |.+|++++++|+..|+ .|++++.++++.+.++++|++.++
T Consensus       111 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~  189 (323)
T cd08241         111 GLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVI  189 (323)
T ss_pred             CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceee
Confidence            99999988888899999998777788999999999998 9999999999999999 789998999999999999988777


Q ss_pred             cCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-hhhcccceEEEEec
Q 017336          239 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFF  316 (373)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~  316 (373)
                      +....+  +.+.+...+.+ ++|.+++++|+ .....++++++++ |+++.+|....... .... ..+.++.++.+...
T Consensus       190 ~~~~~~--~~~~i~~~~~~~~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  264 (323)
T cd08241         190 DYRDPD--LRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWG-GRLLVIGFASGEIP-QIPANLLLLKNISVVGVYW  264 (323)
T ss_pred             ecCCcc--HHHHHHHHcCCCCcEEEEECccH-HHHHHHHHhhccC-CEEEEEccCCCCcC-cCCHHHHhhcCcEEEEEec
Confidence            765544  77778877776 89999999998 7888999999997 99999987542211 1111 22347788887765


Q ss_pred             cCCCCC------CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336          317 GNYKPR------TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  370 (373)
Q Consensus       317 ~~~~~~------~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~  370 (373)
                      ..+...      +.+.++++++.++.+..  +.++.|+++++.++++.+.++.. .|++++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~  323 (323)
T cd08241         265 GAYARREPELLRANLAELFDLLAEGKIRP--HVSAVFPLEQAAEALRALADRKATGKVVLT  323 (323)
T ss_pred             ccccchhHHHHHHHHHHHHHHHHCCCccc--ccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence            433211      24677888888887643  46788999999999998877664 477653

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=100.00  E-value=2.7e-31  Score=244.71  Aligned_cols=300  Identities=23%  Similarity=0.336  Sum_probs=237.4

Q ss_pred             cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC---CCCCCccccccceEEEEEeCCCCCC
Q 017336            4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSD   78 (373)
Q Consensus         4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~   78 (373)
                      |||+++..++..  +++.+.+.|.++++||+|++.++++|+.|+....+...   ...+|.++|||++|+|+.+|++++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~   80 (309)
T cd05289           1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG   80 (309)
T ss_pred             CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence            678888776653  56677788889999999999999999999988776442   3445889999999999999999999


Q ss_pred             CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336           79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  158 (373)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p  158 (373)
                      +++||+|+..+..                                              ...|+|++|+.++.+.++++|
T Consensus        81 ~~~G~~V~~~~~~----------------------------------------------~~~g~~~~~~~~~~~~~~~~p  114 (309)
T cd05289          81 FKVGDEVFGMTPF----------------------------------------------TRGGAYAEYVVVPADELALKP  114 (309)
T ss_pred             CCCCCEEEEccCC----------------------------------------------CCCCcceeEEEecHHHhccCC
Confidence            9999999965310                                              012589999999999999999


Q ss_pred             CCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee
Q 017336          159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF  237 (373)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v  237 (373)
                      +++++..++.+++.+.++|+++.....+.++++|+|+|+ |.+|++++++++..|+ +|+++..++ +.+.++++|++.+
T Consensus       115 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~  192 (309)
T cd05289         115 ANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEV  192 (309)
T ss_pred             CCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEE
Confidence            999999999999999999998877777999999999997 9999999999999999 788887767 8888889998777


Q ss_pred             ecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEec
Q 017336          238 VNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFF  316 (373)
Q Consensus       238 i~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~  316 (373)
                      ++....+  +.+    ...+ ++|++++++++ .....++++++++ |+++.+|.......     ..+.++.++....+
T Consensus       193 ~~~~~~~--~~~----~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-----~~~~~~~~~~~~~~  259 (309)
T cd05289         193 IDYTKGD--FER----AAAPGGVDAVLDTVGG-ETLARSLALVKPG-GRLVSIAGPPPAEQ-----AAKRRGVRAGFVFV  259 (309)
T ss_pred             EeCCCCc--hhh----ccCCCCceEEEECCch-HHHHHHHHHHhcC-cEEEEEcCCCcchh-----hhhhccceEEEEEe
Confidence            7665543  322    2333 79999999998 5888999999997 99999987542111     22234555554433


Q ss_pred             cCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEE
Q 017336          317 GNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCI  368 (373)
Q Consensus       317 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v  368 (373)
                      ...  .+.+.+++++++++.+.  +++++.|++++++++++.+.++... |++
T Consensus       260 ~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv  308 (309)
T cd05289         260 EPD--GEQLAELAELVEAGKLR--PVVDRVFPLEDAAEAHERLESGHARGKVV  308 (309)
T ss_pred             ccc--HHHHHHHHHHHHCCCEE--EeeccEEcHHHHHHHHHHHHhCCCCCcEe
Confidence            211  34688888999888764  3467899999999999998877643 554

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.6e-30  Score=240.42  Aligned_cols=310  Identities=22%  Similarity=0.328  Sum_probs=241.2

Q ss_pred             chhhhccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCCC
Q 017336            5 AAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV   81 (373)
Q Consensus         5 ~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~   81 (373)
                      ||+++...+.  .+++.+.+.|.|++++|+|++.++++|+.|+....+..+. ...|.++|||++|+|+.+|+++.++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~   80 (337)
T cd08275           1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV   80 (337)
T ss_pred             CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence            3455554443  3777788888899999999999999999999887775432 345778999999999999999999999


Q ss_pred             CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336           82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  161 (373)
Q Consensus        82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~  161 (373)
                      ||+|+....                                                 .|+|++|+.++.+.++++|+++
T Consensus        81 G~~V~~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~ip~~~  111 (337)
T cd08275          81 GDRVMGLTR-------------------------------------------------FGGYAEVVNVPADQVFPLPDGM  111 (337)
T ss_pred             CCEEEEecC-------------------------------------------------CCeeeeEEEecHHHeEECCCCC
Confidence            999995410                                                 1589999999999999999999


Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      ++.+++.+++.+.+||+++.....+.++++|+|+|+ |.+|++++++|+.+ +. .++.. .++++.+.++++|++.+++
T Consensus       112 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~  189 (337)
T cd08275         112 SFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVID  189 (337)
T ss_pred             CHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEee
Confidence            999999999999999999888888999999999997 99999999999998 43 33322 3456788888899988877


Q ss_pred             CCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCc--eee-------------cc-ch
Q 017336          240 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA--VFM-------------TK-PI  303 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~--~~~-------------~~-~~  303 (373)
                      ....+  +.+.++..+++++|+++|++|+ .....++++++++ |+++.+|......  ...             .. ..
T Consensus       190 ~~~~~--~~~~~~~~~~~~~d~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (337)
T cd08275         190 YRTQD--YVEEVKKISPEGVDIVLDALGG-EDTRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMK  265 (337)
T ss_pred             CCCCc--HHHHHHHHhCCCceEEEECCcH-HHHHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHH
Confidence            66544  7777777775689999999998 5778899999997 9999998654211  111             11 12


Q ss_pred             hhcccceEEEEeccCCCCC-----CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          304 NVLNERTLKGTFFGNYKPR-----TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       304 ~~~~~~~i~g~~~~~~~~~-----~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      .+.++.++.++.+......     ..+.++++++.++.+.+  +..+.|++++++++++.+.++.. .|+++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         266 LISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKP--KIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             HhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCC--ceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            2347778877764321111     13567888888887654  36788999999999999987764 4888764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.98  E-value=3.2e-30  Score=238.96  Aligned_cols=294  Identities=23%  Similarity=0.313  Sum_probs=224.3

Q ss_pred             EEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC---CCCCCccccccceEEEEEeCCCCCCCCCCCEEeecCcCCC
Q 017336           17 IIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGEC   93 (373)
Q Consensus        17 ~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~   93 (373)
                      ++.+.+.|.|+++||+|++.++++|++|+....|..+   ....|.++|||++|+|+++|++++.+++||+|+.....  
T Consensus        15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~--   92 (319)
T cd08267          15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP--   92 (319)
T ss_pred             ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence            7788899999999999999999999999988776542   12346789999999999999999999999999865211  


Q ss_pred             CCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchhhhhcccch
Q 017336           94 GDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV  173 (373)
Q Consensus        94 ~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~  173 (373)
                                                                  ...|+|++|+.++++.++++|+++++++++.+++.+
T Consensus        93 --------------------------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~  128 (319)
T cd08267          93 --------------------------------------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAG  128 (319)
T ss_pred             --------------------------------------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence                                                        012589999999999999999999999999999999


Q ss_pred             hhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHH
Q 017336          174 STGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA  252 (373)
Q Consensus       174 ~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~  252 (373)
                      .+||+++.....+.++++|+|+|+ |.+|++++++|+.+|+ +|+++.++ ++.+.++++|++.+++....+  +.   .
T Consensus       129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~--~~---~  201 (319)
T cd08267         129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTTED--FV---A  201 (319)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCCCC--cc---h
Confidence            999999877777999999999997 9999999999999999 78888765 888888999998887765543  32   3


Q ss_pred             HHcCC-CccEEEEccCCh-HhHHHHHHHhhcCCcEEEEEcCCCCCceeec---cchhhcccceEEEEeccCCCCCCCHHH
Q 017336          253 EMTNG-GVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGVPSKDAVFMT---KPINVLNERTLKGTFFGNYKPRTDLPS  327 (373)
Q Consensus       253 ~~~~~-~~d~vid~~g~~-~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~---~~~~~~~~~~i~g~~~~~~~~~~~~~~  327 (373)
                      ..+.+ ++|++++|+++. ......+..++++ |+++.+|..........   ..........+.....  ....+.+.+
T Consensus       202 ~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  278 (319)
T cd08267         202 LTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLA--KPNAEDLEQ  278 (319)
T ss_pred             hccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEe--cCCHHHHHH
Confidence            33444 899999999852 2333444458996 99999987643222211   0111111122222211  111446888


Q ss_pred             HHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEE
Q 017336          328 VVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCI  368 (373)
Q Consensus       328 ~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v  368 (373)
                      +++++.++.+..  ++++.|+++++++|++.+.+++.. |++
T Consensus       279 ~~~~l~~~~~~~--~~~~~~~~~~i~~a~~~~~~~~~~~~vv  318 (319)
T cd08267         279 LAELVEEGKLKP--VIDSVYPLEDAPEAYRRLKSGRARGKVV  318 (319)
T ss_pred             HHHHHHCCCeee--eeeeEEcHHHHHHHHHHHhcCCCCCcEe
Confidence            899999887653  477899999999999999876643 554

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.97  E-value=5.6e-30  Score=233.51  Aligned_cols=281  Identities=22%  Similarity=0.288  Sum_probs=226.1

Q ss_pred             CeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCc
Q 017336           29 MEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD  108 (373)
Q Consensus        29 ~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~  108 (373)
                      +|++||+.++++|++|+....+..  ..+|.++|||++|+|+++|+++..+++||+|++..                   
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~-------------------   59 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA-------------------   59 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence            589999999999999999887654  34578999999999999999999999999998541                   


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCC
Q 017336          109 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  188 (373)
Q Consensus       109 ~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~  188 (373)
                                                     .|+|++|+.++.+.++++|+++++.+++.+++++.++|.++.+...+++
T Consensus        60 -------------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~  108 (293)
T cd05195          60 -------------------------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQK  108 (293)
T ss_pred             -------------------------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCC
Confidence                                           2589999999999999999999999999999999999998877788999


Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC--CceeecCCCCCccHHHHHHHHcCC-CccEEEE
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG--VTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE  264 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg--~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid  264 (373)
                      +++|+|+|+ |.+|++++|+++.+|+ +|+++.+++++.+.+++++  ++.+++....+  +.+.+.+.+.+ ++|+++|
T Consensus       109 g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~  185 (293)
T cd05195         109 GESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRDLS--FADGILRATGGRGVDVVLN  185 (293)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCchh--HHHHHHHHhCCCCceEEEe
Confidence            999999975 9999999999999999 7888888889999998888  66777665443  77778887766 8999999


Q ss_pred             ccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCC------CCCCHHHHHHHHHcCCCC
Q 017336          265 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK------PRTDLPSVVDMYMNKQLE  338 (373)
Q Consensus       265 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~------~~~~~~~~~~~l~~~~l~  338 (373)
                      ++|+. .+..++++++++ |+++.+|..............+.++.++....+....      ..+.+.++++++.++++.
T Consensus       186 ~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (293)
T cd05195         186 SLSGE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK  263 (293)
T ss_pred             CCCch-HHHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc
Confidence            99984 889999999997 9999998754321112222333355555554432211      012366788888888765


Q ss_pred             CCCceeeeeccccHHHHHHHHHcCCce-eEE
Q 017336          339 LEKFITHRIPFSEINKAFEYMVKGEGL-RCI  368 (373)
Q Consensus       339 ~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v  368 (373)
                        ++....+++++++++++.+.+++.. |++
T Consensus       264 --~~~~~~~~~~~~~~a~~~~~~~~~~~~iv  292 (293)
T cd05195         264 --PLPPTVVPSASEIDAFRLMQSGKHIGKVV  292 (293)
T ss_pred             --cCCCeeechhhHHHHHHHHhcCCCCceec
Confidence              3467789999999999999887754 655

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>smart00829 PKS_ER Enoylreductase

Probab=99.97  E-value=1.2e-29  Score=230.95  Aligned_cols=276  Identities=21%  Similarity=0.328  Sum_probs=221.8

Q ss_pred             EEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccc
Q 017336           33 IKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI  112 (373)
Q Consensus        33 V~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~  112 (373)
                      ||+.++++|++|+....+.++   .|.++|||++|+|+.+|+.++.|++||+|+...                       
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~-----------------------   55 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA-----------------------   55 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence            899999999999998877543   367899999999999999999999999998541                       


Q ss_pred             cCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEE
Q 017336          113 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  192 (373)
Q Consensus       113 ~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~v  192 (373)
                                                 .|+|++|+.++.++++++|+++++.+++.+++.+.++|.++.+...+.++++|
T Consensus        56 ---------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~v  108 (288)
T smart00829       56 ---------------------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESV  108 (288)
T ss_pred             ---------------------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEE
Confidence                                       25899999999999999999999999999999999999987778889999999


Q ss_pred             EEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC--ceeecCCCCCccHHHHHHHHcCC-CccEEEEccCC
Q 017336          193 AVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--TDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  268 (373)
Q Consensus       193 lI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~--~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~  268 (373)
                      +|+|+ |.+|++++++++.+|+ +|+++.+++++.+.++++|+  +.++++...+  +.+.+.+.+++ ++|+++|++++
T Consensus       109 lv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~  185 (288)
T smart00829      109 LIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRDLS--FADEILRATGGRGVDVVLNSLAG  185 (288)
T ss_pred             EEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCCcc--HHHHHHHHhCCCCcEEEEeCCCH
Confidence            99986 9999999999999999 79999889999999999998  6677765544  77777777766 89999999986


Q ss_pred             hHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCC-----CCCCHHHHHHHHHcCCCCCCCce
Q 017336          269 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK-----PRTDLPSVVDMYMNKQLELEKFI  343 (373)
Q Consensus       269 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~l~~~~l~~~~~~  343 (373)
                       .....++++++++ |+++.+|..............+.++.++.+..+....     ..+.+.++++++.++++.+.  .
T Consensus       186 -~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  261 (288)
T smart00829      186 -EFLDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--P  261 (288)
T ss_pred             -HHHHHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--C
Confidence             7788899999997 9999998653211122222223455666555432110     11236678888888877643  4


Q ss_pred             eeeeccccHHHHHHHHHcCCce-eEE
Q 017336          344 THRIPFSEINKAFEYMVKGEGL-RCI  368 (373)
Q Consensus       344 ~~~~~l~~~~~a~~~l~~~~~~-k~v  368 (373)
                      .+.|++++++++++.+..++.. |++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~iv  287 (288)
T smart00829      262 VTVFPISDVEDAFRYMQQGKHIGKVV  287 (288)
T ss_pred             ceEEcHHHHHHHHHHHhcCCCcceEe
Confidence            6789999999999999887643 654

Enoylreductase in Polyketide synthases.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.96  E-value=8.3e-28  Score=207.62  Aligned_cols=294  Identities=19%  Similarity=0.217  Sum_probs=224.0

Q ss_pred             EEEeecC-CCCCCeEEEEEeeeecCcccccccccCCCC-CCCC-----ccccccceEEEEEeCCCCCCCCCCCEEeecCc
Q 017336           18 IQDVEVA-PPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFP-----RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT   90 (373)
Q Consensus        18 ~~~~~~p-~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p-----~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~   90 (373)
                      ..+.+++ ++++++|+||.+|-+..|.-...+....+. .-.|     .|.| .++|+|++  |+.+.+++||.|+..  
T Consensus        26 ~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g-~GV~kVi~--S~~~~~~~GD~v~g~--  100 (343)
T KOG1196|consen   26 TTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDG-FGVAKVID--SGHPNYKKGDLVWGI--  100 (343)
T ss_pred             eeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecC-CceEEEEe--cCCCCCCcCceEEEe--
Confidence            3445544 468999999999999977533222111111 1112     2344 78999999  566889999999943  


Q ss_pred             CCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC--ceEeCC--CCCCchhh
Q 017336           91 GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKIN--PLAPLDKV  166 (373)
Q Consensus        91 ~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p--~~~~~~~a  166 (373)
                                                  .                      +|.||.++++.  ..++++  .+.++...
T Consensus       101 ----------------------------~----------------------gWeeysii~~~~~~~~ki~~~~~~pLs~y  130 (343)
T KOG1196|consen  101 ----------------------------V----------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYY  130 (343)
T ss_pred             ----------------------------c----------------------cceEEEEecCcchhcccCCCCCccCHhhh
Confidence                                        3                      89999999775  344443  45565554


Q ss_pred             hh-cccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCC
Q 017336          167 CI-LSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEH  243 (373)
Q Consensus       167 a~-~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~  243 (373)
                      .. +..+.+|||..+.+++.+++|++|+|-|| |++|+++.|+|+.+|+ +|+++..++||..+++. +|.+..+||+++
T Consensus       131 lg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~e  209 (343)
T KOG1196|consen  131 LGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEE  209 (343)
T ss_pred             hhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccCc
Confidence            33 56789999999999999999999999987 9999999999999999 99999999999999875 799999999887


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCc---eeecc--chhhcccceEEEEeccC
Q 017336          244 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA---VFMTK--PINVLNERTLKGTFFGN  318 (373)
Q Consensus       244 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~---~~~~~--~~~~~~~~~i~g~~~~~  318 (373)
                      . +..+++++..+.|+|+.||.+|+ ..++..+..|+.. ||++++|..+...   +..+.  ...+.|++++.|+....
T Consensus       210 ~-~~~~aL~r~~P~GIDiYfeNVGG-~~lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d  286 (343)
T KOG1196|consen  210 S-DLSAALKRCFPEGIDIYFENVGG-KMLDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSD  286 (343)
T ss_pred             c-CHHHHHHHhCCCcceEEEeccCc-HHHHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeec
Confidence            2 27788888888899999999999 8999999999995 9999999876311   11111  12234889998877655


Q ss_pred             CCCC--CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEEEecC
Q 017336          319 YKPR--TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCIISME  372 (373)
Q Consensus       319 ~~~~--~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v~~~~  372 (373)
                      +.+.  +.+..+.+++++|++....-+  .-.|+..+.||..|.++++. |.++.+.
T Consensus       287 ~~d~~~k~ld~l~~~ikegKI~y~edi--~~Glen~P~A~vglf~GkNvGKqiv~va  341 (343)
T KOG1196|consen  287 YLDKYPKFLDFLLPYIKEGKITYVEDI--ADGLENGPSALVGLFHGKNVGKQLVKVA  341 (343)
T ss_pred             hhhhhHHHHHHHHHHHhcCceEEehhH--HHHHhccHHHHHHHhccCcccceEEEee
Confidence            5433  346778899999998765333  34799999999999999974 8888764

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.96  E-value=1.2e-27  Score=217.54  Aligned_cols=251  Identities=26%  Similarity=0.412  Sum_probs=197.3

Q ss_pred             cCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCccccc
Q 017336           50 SKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSI  129 (373)
Q Consensus        50 g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~  129 (373)
                      |.++ .++|.++|||++|+|+++|++++.|++||+|+..                                         
T Consensus        14 ~~~~-~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-----------------------------------------   51 (277)
T cd08255          14 GTEK-LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-----------------------------------------   51 (277)
T ss_pred             cCcc-CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------
Confidence            4344 3488999999999999999999999999999854                                         


Q ss_pred             CCCccccccCCcceeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHH
Q 017336          130 NGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGAR  209 (373)
Q Consensus       130 ~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~  209 (373)
                                 +.|++|+.++++.++++|+++++.+++.+ +++++||+++ ..+++.+++++||+|+|.+|++++++|+
T Consensus        52 -----------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~  118 (277)
T cd08255          52 -----------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAK  118 (277)
T ss_pred             -----------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHH
Confidence                       26899999999999999999999998888 7899999986 4788999999999988999999999999


Q ss_pred             HcCCcEEEEEcCChhHHHHHHhcC-CceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEE
Q 017336          210 IAGASRIIGVDRSSKRFEEAKKFG-VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVL  288 (373)
Q Consensus       210 ~~g~~~V~~~~~~~~~~~~~~~lg-~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~  288 (373)
                      ++|+++|+++++++++.+.++++| .+.++.....         ...+.++|++||+++.......++++++++ |+++.
T Consensus       119 ~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---------~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~  188 (277)
T cd08255         119 AAGAREVVGVDPDAARRELAEALGPADPVAADTAD---------EIGGRGADVVIEASGSPSALETALRLLRDR-GRVVL  188 (277)
T ss_pred             HcCCCcEEEECCCHHHHHHHHHcCCCccccccchh---------hhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEE
Confidence            999944999999999999999999 4444432211         112238999999998778889999999997 99999


Q ss_pred             EcCCCCCceeeccchhhc-ccceEEEEeccCC---------CCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHH
Q 017336          289 VGVPSKDAVFMTKPINVL-NERTLKGTFFGNY---------KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEY  358 (373)
Q Consensus       289 ~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~---------~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~  358 (373)
                      +|..... ..... ..+. +..++.+......         ...+.++++++++.++.+..  .+.+.|+++++++|++.
T Consensus       189 ~g~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~  264 (277)
T cd08255         189 VGWYGLK-PLLLG-EEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEA--LITHRVPFEDAPEAYRL  264 (277)
T ss_pred             EeccCCC-ccccH-HHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCccc--cccCccCHHHHHHHHHH
Confidence            9876533 21111 2222 5556666543221         11246889999999997543  36788999999999999


Q ss_pred             HHcCC--ceeEEE
Q 017336          359 MVKGE--GLRCII  369 (373)
Q Consensus       359 l~~~~--~~k~v~  369 (373)
                      +.+++  ..|+++
T Consensus       265 ~~~~~~~~~k~~~  277 (277)
T cd08255         265 LFEDPPECLKVVL  277 (277)
T ss_pred             HHcCCccceeeeC
Confidence            98873  347654

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.95  E-value=4.2e-27  Score=231.49  Aligned_cols=293  Identities=17%  Similarity=0.201  Sum_probs=239.9

Q ss_pred             eEEEEeecC---CCCCCeEEEEEeeeecCcccccccccCCCCCCCC-------ccccccceEEEEEeCCCCCCCCCCCEE
Q 017336           16 LIIQDVEVA---PPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFP-------RIFGHEAAGVVESVGEGVSDLEVGDHV   85 (373)
Q Consensus        16 ~~~~~~~~p---~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p-------~i~G~e~~G~V~~vG~~v~~~~~Gd~V   85 (373)
                      +++.+.+..   +..++.=+-.|-|+++|..|++...|+.+..-.|       .++|-||+|+-          +-|.||
T Consensus      1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd----------~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRD----------ASGRRV 1498 (2376)
T ss_pred             eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeecccc----------CCCcEE
Confidence            666666655   2356667889999999999999999877654433       68999999984          459999


Q ss_pred             eecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchh
Q 017336           86 LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK  165 (373)
Q Consensus        86 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~  165 (373)
                      +....                              .                   -++++.+.++.++++.+|++..+++
T Consensus      1499 M~mvp------------------------------A-------------------ksLATt~l~~rd~lWevP~~WTlee 1529 (2376)
T KOG1202|consen 1499 MGMVP------------------------------A-------------------KSLATTVLASRDFLWEVPSKWTLEE 1529 (2376)
T ss_pred             EEeee------------------------------h-------------------hhhhhhhhcchhhhhhCCcccchhh
Confidence            95421                              1                   2789999999999999999999999


Q ss_pred             hhhcccchhhhhhhhhhccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCceeecC
Q 017336          166 VCILSCGVSTGLGATLNVAKPERGSSVAVF-GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNT  240 (373)
Q Consensus       166 aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~-G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l----g~~~vi~~  240 (373)
                      |++.|+.+.||||+|..++..++|++|||+ |+|++|++||.+|.+.|+ +|+.+..+.||++++.+.    ....+-|.
T Consensus      1530 AstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NS 1608 (2376)
T KOG1202|consen 1530 ASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANS 1608 (2376)
T ss_pred             cccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccc
Confidence            999999999999999999999999999999 459999999999999999 899999999999998763    33444455


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCC
Q 017336          241 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY  319 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  319 (373)
                      .+.+  |..-+...|.| |+|+|+++... +-++.+++||+-+ ||+..+|..+-....++.+..|.+|.+++|..+-+.
T Consensus      1609 Rdts--FEq~vl~~T~GrGVdlVLNSLae-EkLQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsv 1684 (2376)
T KOG1202|consen 1609 RDTS--FEQHVLWHTKGRGVDLVLNSLAE-EKLQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSV 1684 (2376)
T ss_pred             cccc--HHHHHHHHhcCCCeeeehhhhhH-HHHHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhhh
Confidence            4444  88889999999 99999999987 8899999999997 999999976544445556666779999999876444


Q ss_pred             CCC--CCHHHHHHHHHcCCC--CCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336          320 KPR--TDLPSVVDMYMNKQL--ELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       320 ~~~--~~~~~~~~~l~~~~l--~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                      ...  +.+.++.+++++|.-  ...|+.+..|+-.++++||+.|.+++. +|+|+++.
T Consensus      1685 mege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr 1742 (2376)
T KOG1202|consen 1685 MEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVR 1742 (2376)
T ss_pred             hcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEc
Confidence            322  346677788777632  256778999999999999999999996 59999873

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.89  E-value=1.2e-23  Score=163.35  Aligned_cols=108  Identities=36%  Similarity=0.639  Sum_probs=94.5

Q ss_pred             CCeEEEEEeeeecCccccccccc-CCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCc
Q 017336           28 AMEVRIKIKYTSLCRTDLYFWES-KGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNM  106 (373)
Q Consensus        28 ~~evlV~v~~~~i~~~D~~~~~g-~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~  106 (373)
                      |+||||||.++|||++|++.+.+ ......+|.++|||++|+|+++|++++.|++||+|++.+...|+.|.+|..+.++.
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~   80 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL   80 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence            78999999999999999999998 35567889999999999999999999999999999999999999999999999999


Q ss_pred             CccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeC
Q 017336          107 CDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI  157 (373)
Q Consensus       107 ~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~  157 (373)
                      |++....   |+.                   ..|+|+||+.+++++++++
T Consensus        81 c~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   81 CPNPEVL---GLG-------------------LDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             TTTBEET---TTS-------------------STCSSBSEEEEEGGGEEEE
T ss_pred             CCCCCEe---EcC-------------------CCCcccCeEEEehHHEEEC
Confidence            9877655   322                   2469999999999999875

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.72  E-value=1.1e-16  Score=128.50  Aligned_cols=128  Identities=32%  Similarity=0.556  Sum_probs=111.0

Q ss_pred             HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHH
Q 017336          199 AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFE  277 (373)
Q Consensus       199 ~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~  277 (373)
                      ++|++++|+|+.+|+ +|++++++++|++.++++|++.++++++.+  +.+.+++.+++ ++|+||||+|++..++.+++
T Consensus         1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~--~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~   77 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSDDD--FVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK   77 (130)
T ss_dssp             HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTTSS--HHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccccc--cccccccccccccceEEEEecCcHHHHHHHHH
Confidence            589999999999996 999999999999999999999999998877  99999999998 99999999998899999999


Q ss_pred             HhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEeccCCCCCCCHHHHHHHHHc
Q 017336          278 CVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMN  334 (373)
Q Consensus       278 ~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~l~~  334 (373)
                      +++++ |+++.+|... .....++...+ .+++++.|+..+.   .++++++++++.+
T Consensus        78 ~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la~  130 (130)
T PF00107_consen   78 LLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLAQ  130 (130)
T ss_dssp             HEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH-
T ss_pred             HhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhcC
Confidence            99997 9999999987 44555555544 4999999998655   3467888877653

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.47  E-value=1.1e-12  Score=123.32  Aligned_cols=175  Identities=21%  Similarity=0.215  Sum_probs=133.2

Q ss_pred             hhhhhhccC-CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHc
Q 017336          177 LGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       177 ~~~l~~~~~-~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~  255 (373)
                      +.++.+..+ .-+|++|+|+|+|.+|+.+++.++.+|+ +|++++.++.|++.++.+|++.+.        ..+.+    
T Consensus       189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~~--------~~e~v----  255 (413)
T cd00401         189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVMT--------MEEAV----  255 (413)
T ss_pred             HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEcc--------HHHHH----
Confidence            344444444 4689999999999999999999999999 899999999999999999985331        11112    


Q ss_pred             CCCccEEEEccCChHhHHHH-HHHhhcCCcEEEEEcCCCCCceeeccchhhc-ccceEEEEeccCCCCCCCHH--HHHHH
Q 017336          256 NGGVDRSVECTGNIDNMISA-FECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPRTDLP--SVVDM  331 (373)
Q Consensus       256 ~~~~d~vid~~g~~~~~~~~-~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~--~~~~~  331 (373)
                       .++|+||+|+|.+..+... ++.++++ ++++.+|..  +  ..++...+. +++++.++..+..  ..++.  ..+.+
T Consensus       256 -~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~--~--~eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI~L  327 (413)
T cd00401         256 -KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF--D--VEIDVKGLKENAVEVVNIKPQVD--RYELPDGRRIIL  327 (413)
T ss_pred             -cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC--C--CccCHHHHHhhccEEEEccCCcc--eEEcCCcchhhh
Confidence             2589999999998888866 9999997 999999854  2  233333333 7788887764321  11344  68999


Q ss_pred             HHcCCC-CCCCceeee-----eccc-cHHHHHHHHHcCCc--eeEEEecC
Q 017336          332 YMNKQL-ELEKFITHR-----IPFS-EINKAFEYMVKGEG--LRCIISME  372 (373)
Q Consensus       332 l~~~~l-~~~~~~~~~-----~~l~-~~~~a~~~l~~~~~--~k~v~~~~  372 (373)
                      +.+|++ ++...+++.     ++|+ |+.+++..+.+++.  .|+++.++
T Consensus       328 La~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~  377 (413)
T cd00401         328 LAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK  377 (413)
T ss_pred             hhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence            999998 888888888     9999 99999998887764  37776653

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.34  E-value=2.7e-11  Score=116.89  Aligned_cols=155  Identities=17%  Similarity=0.143  Sum_probs=112.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCC-----------ccHHHHHH
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHD-----------RPIQEVIA  252 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~-----------~~~~~~~~  252 (373)
                      +..++++|+|+|+|.+|+++++.|+.+|+ +|++++.++++++.++++|++.+ ++..+.+           .++.+...
T Consensus       161 G~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~  239 (509)
T PRK09424        161 GKVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM  239 (509)
T ss_pred             CCcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence            45689999999999999999999999999 89999999999999999999854 5543321           12333333


Q ss_pred             HH-cC--CCccEEEEccCChH-----h-HHHHHHHhhcCCcEEEEEcCCCCCc-eeeccchh-hc-ccceEEEEeccCCC
Q 017336          253 EM-TN--GGVDRSVECTGNID-----N-MISAFECVHDGWGVAVLVGVPSKDA-VFMTKPIN-VL-NERTLKGTFFGNYK  320 (373)
Q Consensus       253 ~~-~~--~~~d~vid~~g~~~-----~-~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~-~~-~~~~i~g~~~~~~~  320 (373)
                      +. ..  +++|+||+|++.+.     . .+++++.++++ |+++.+|...++. ........ +. +++++.|...  .+
T Consensus       240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~P  316 (509)
T PRK09424        240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--LP  316 (509)
T ss_pred             HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--Cc
Confidence            32 32  27999999999633     5 49999999997 9999999853221 22322222 33 7899998763  22


Q ss_pred             CCCCHHHHHHHHHcCCCCCCCcee
Q 017336          321 PRTDLPSVVDMYMNKQLELEKFIT  344 (373)
Q Consensus       321 ~~~~~~~~~~~l~~~~l~~~~~~~  344 (373)
                       .+...+..+++.++.+++.++++
T Consensus       317 -~~~p~~As~lla~~~i~l~~lIt  339 (509)
T PRK09424        317 -SRLPTQSSQLYGTNLVNLLKLLC  339 (509)
T ss_pred             -hhHHHHHHHHHHhCCccHHHHhc
Confidence             23233588899998877665554

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.15  E-value=1.2e-11  Score=98.60  Aligned_cols=119  Identities=18%  Similarity=0.327  Sum_probs=76.3

Q ss_pred             cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC--ChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-ccc
Q 017336          232 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG--NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNE  308 (373)
Q Consensus       232 lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~  308 (373)
                      ||+++++|++..+  +      ...+++|+|||++|  +...+..+.++| ++ |+++.++.       ....... .+.
T Consensus         1 LGAd~vidy~~~~--~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-------~~~~~~~~~~~   63 (127)
T PF13602_consen    1 LGADEVIDYRDTD--F------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-------DLPSFARRLKG   63 (127)
T ss_dssp             CT-SEEEETTCSH--H------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-------HHHHHHHHHHC
T ss_pred             CCcCEEecCCCcc--c------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-------cccchhhhhcc
Confidence            6899999998553  3      22348999999999  655557788888 96 99999874       1111111 122


Q ss_pred             ceEEEEeccC-CC---CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 017336          309 RTLKGTFFGN-YK---PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII  369 (373)
Q Consensus       309 ~~i~g~~~~~-~~---~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~  369 (373)
                      ..+....+.. ..   ..+.++++++++.+|++.+.  +.++|||+++++|++.+++++. +|+||
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~--i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   64 RSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPP--IDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             cceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEe--eccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            2223333221 01   12358999999999987654  8899999999999999999885 58886

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.64  E-value=1.2e-07  Score=85.89  Aligned_cols=167  Identities=18%  Similarity=0.272  Sum_probs=103.3

Q ss_pred             ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCc-EEEEEcCChhHHHHHHhc----CCceeecCCCCCccHHHHHHHHcCC
Q 017336          183 VAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNG  257 (373)
Q Consensus       183 ~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~-~V~~~~~~~~~~~~~~~l----g~~~vi~~~~~~~~~~~~~~~~~~~  257 (373)
                      .+.++++++||.+|+|. |..++++++..|.. +|++++.+++.++.+++.    +...+. ....+  +.+ + .+..+
T Consensus        72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~~d--~~~-l-~~~~~  145 (272)
T PRK11873         72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRLGE--IEA-L-PVADN  145 (272)
T ss_pred             hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEEcc--hhh-C-CCCCC
Confidence            46788999999999988 88888888887753 799999999998888763    433221 11111  111 1 11233


Q ss_pred             CccEEEEcc------CChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCCCCCHHHHHHH
Q 017336          258 GVDRSVECT------GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM  331 (373)
Q Consensus       258 ~~d~vid~~------g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~  331 (373)
                      .||+|+...      ..+..+..+.+.|+++ |++++.+..... .+   +..+.+...+.+.....   .....++.++
T Consensus       146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~-~~---~~~~~~~~~~~~~~~~~---~~~~~e~~~~  217 (272)
T PRK11873        146 SVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRG-EL---PEEIRNDAELYAGCVAG---ALQEEEYLAM  217 (272)
T ss_pred             ceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccC-CC---CHHHHHhHHHHhccccC---CCCHHHHHHH
Confidence            799998643      2346789999999997 999987664322 11   11122222222221111   1245666777


Q ss_pred             HHc-CCCCCCCceeeeeccccHHHHHHHH--HcCC
Q 017336          332 YMN-KQLELEKFITHRIPFSEINKAFEYM--VKGE  363 (373)
Q Consensus       332 l~~-~~l~~~~~~~~~~~l~~~~~a~~~l--~~~~  363 (373)
                      +++ |-..........++++++.++++.+  .+++
T Consensus       218 l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~  252 (272)
T PRK11873        218 LAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGR  252 (272)
T ss_pred             HHHCCCCceEEEeccceecccHHHHHHHhcccccc
Confidence            766 3322322244568899999999988  4444

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.53  E-value=1.2e-06  Score=84.77  Aligned_cols=127  Identities=19%  Similarity=0.177  Sum_probs=90.6

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCC-----------CccHHHHHHH
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEH-----------DRPIQEVIAE  253 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~-----------~~~~~~~~~~  253 (373)
                      ..++++|+|+|+|.+|++++++++.+|+ .|++++.+.++++.++++|++.+ ++..+.           ..++.+...+
T Consensus       161 ~vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~  239 (511)
T TIGR00561       161 KVPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME  239 (511)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence            3467999999999999999999999999 79999999999999999999764 332111           0123333333


Q ss_pred             HcC---CCccEEEEcc---CChH---hHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-hh-hc--ccceEEEEe
Q 017336          254 MTN---GGVDRSVECT---GNID---NMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-IN-VL--NERTLKGTF  315 (373)
Q Consensus       254 ~~~---~~~d~vid~~---g~~~---~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~-~~--~~~~i~g~~  315 (373)
                      .+.   .++|++|+|+   |.+.   ..+..++.|+++ +.++.++...++ .+.+.. .. +.  .++++.+..
T Consensus       240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG-n~E~t~p~~~~~~~~GV~~~gv~  312 (511)
T TIGR00561       240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG-NCEYTKPGEVYTTENQVKVIGYT  312 (511)
T ss_pred             HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC-CEEEecCceEEEecCCEEEEeeC
Confidence            332   2799999999   6543   577889999997 999999876544 343331 11 22  347776654

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.35  E-value=1.2e-05  Score=73.52  Aligned_cols=99  Identities=18%  Similarity=0.283  Sum_probs=77.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .+++|+|+|.|.+|+.+++.++.+|+ +|++++++.++.+.++++|+..+ .       + +.+.+... ++|+||++++
T Consensus       151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~-------~-~~l~~~l~-~aDiVI~t~p  219 (296)
T PRK08306        151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-H-------L-SELAEEVG-KIDIIFNTIP  219 (296)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-c-------H-HHHHHHhC-CCCEEEECCC
Confidence            58999999999999999999999999 89999999988888888887543 1       1 12223322 6999999997


Q ss_pred             ChHhHHHHHHHhhcCCcEEEEEcCCCCCcee
Q 017336          268 NIDNMISAFECVHDGWGVAVLVGVPSKDAVF  298 (373)
Q Consensus       268 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~  298 (373)
                      ........++.++++ +.++.++...+...+
T Consensus       220 ~~~i~~~~l~~~~~g-~vIIDla~~pggtd~  249 (296)
T PRK08306        220 ALVLTKEVLSKMPPE-ALIIDLASKPGGTDF  249 (296)
T ss_pred             hhhhhHHHHHcCCCC-cEEEEEccCCCCcCe
Confidence            644556778889997 999989887655433

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.33  E-value=6.8e-06  Score=78.05  Aligned_cols=103  Identities=26%  Similarity=0.270  Sum_probs=78.8

Q ss_pred             hhhhhhhccCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHH
Q 017336          176 GLGATLNVAKPE-RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM  254 (373)
Q Consensus       176 a~~~l~~~~~~~-~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~  254 (373)
                      +|.++....++. .+++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+. +.+       +.+.+   
T Consensus       198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l~eal---  265 (425)
T PRK05476        198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------MEEAA---  265 (425)
T ss_pred             hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------HHHHH---
Confidence            344444333444 89999999999999999999999999 899999988887766666764 221       22211   


Q ss_pred             cCCCccEEEEccCChHhHH-HHHHHhhcCCcEEEEEcCCC
Q 017336          255 TNGGVDRSVECTGNIDNMI-SAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       255 ~~~~~d~vid~~g~~~~~~-~~~~~l~~~~g~~v~~g~~~  293 (373)
                        .++|+||+++|....+. ..+..++++ +.++..|...
T Consensus       266 --~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d  302 (425)
T PRK05476        266 --ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD  302 (425)
T ss_pred             --hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence              26899999999877776 688899997 8999888765

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.30  E-value=4.7e-08  Score=93.63  Aligned_cols=160  Identities=19%  Similarity=0.209  Sum_probs=106.0

Q ss_pred             cccccceEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccC
Q 017336           60 IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLG  139 (373)
Q Consensus        60 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~  139 (373)
                      .-|.|+++-+.+|++++++     +|++.+.. |++|.+|    ++.|......   |..                   -
T Consensus        89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~---g~~-------------------l  136 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTV---GKV-------------------L  136 (417)
T ss_pred             cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCc---hHH-------------------H
Confidence            3588999999999999776     77777777 8888888    6667655544   322                   1


Q ss_pred             CcceeeEEEEecCceEe---C-CCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Q 017336          140 TSTFSEYTVVHSGCVAK---I-NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASR  215 (373)
Q Consensus       140 ~G~~a~~~~v~~~~~~~---~-p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~  215 (373)
                      .+.|++++.++. .+..   + +..+|...+|         .....+..+.-++++|+|+|+|.+|..+++.++..|+.+
T Consensus       137 ~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A---------v~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~  206 (417)
T TIGR01035       137 ERLFQKAFSVGK-RVRTETDISAGAVSISSAA---------VELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGK  206 (417)
T ss_pred             HHHHHHHHHHhh-hhhhhcCCCCCCcCHHHHH---------HHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCE
Confidence            258888887765 3332   2 2223222221         110122334457899999999999999999999999668


Q ss_pred             EEEEcCChhHHH-HHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHh
Q 017336          216 IIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN  271 (373)
Q Consensus       216 V~~~~~~~~~~~-~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  271 (373)
                      |++++++.++.+ +++++|.. .+..        +.+.+... ++|+||+|++.+..
T Consensus       207 V~v~~rs~~ra~~la~~~g~~-~i~~--------~~l~~~l~-~aDvVi~aT~s~~~  253 (417)
T TIGR01035       207 ILIANRTYERAEDLAKELGGE-AVKF--------EDLEEYLA-EADIVISSTGAPHP  253 (417)
T ss_pred             EEEEeCCHHHHHHHHHHcCCe-EeeH--------HHHHHHHh-hCCEEEECCCCCCc
Confidence            999999987754 66677764 2221        11222222 68999999987643

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.19  E-value=2.2e-05  Score=74.18  Aligned_cols=101  Identities=29%  Similarity=0.314  Sum_probs=77.5

Q ss_pred             hhhhhccC-CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcC
Q 017336          178 GATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       178 ~~l~~~~~-~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~  256 (373)
                      .++.+..+ .-.|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.+...+...|+. +.+       ..+.+     
T Consensus       183 ~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal-----  248 (406)
T TIGR00936       183 DGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA-----  248 (406)
T ss_pred             HHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH-----
Confidence            33334333 3689999999999999999999999999 899998888887777777763 221       21212     


Q ss_pred             CCccEEEEccCChHhHH-HHHHHhhcCCcEEEEEcCCC
Q 017336          257 GGVDRSVECTGNIDNMI-SAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       257 ~~~d~vid~~g~~~~~~-~~~~~l~~~~g~~v~~g~~~  293 (373)
                      .+.|++|+++|....+. ..+..++++ +.++.+|...
T Consensus       249 ~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~~  285 (406)
T TIGR00936       249 KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHFD  285 (406)
T ss_pred             hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence            25799999999988776 488899997 9999888764

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=98.07  E-value=5.6e-05  Score=68.45  Aligned_cols=139  Identities=13%  Similarity=0.131  Sum_probs=86.4

Q ss_pred             ceeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhcc---CCCCCCEEEEECC-CHHHHHHHHHHH-HcCCcEE
Q 017336          142 TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA---KPERGSSVAVFGL-GAVGLAAAEGAR-IAGASRI  216 (373)
Q Consensus       142 ~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~---~~~~~~~vlI~G~-g~~G~~ai~la~-~~g~~~V  216 (373)
                      .|-+|.++..+..+.-  ......+..-| -+.|.|. |.+..   ..-..+.|+|.+| +-+++..+..++ ..+..++
T Consensus        90 ~YN~Y~r~~~d~~y~~--~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~  165 (314)
T PF11017_consen   90 IYNQYLRVSADPAYDP--EREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV  165 (314)
T ss_pred             hhhceeecCCCcccCc--chhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence            5566666655543311  11112222223 3455553 23222   2234467778877 788888888887 5555589


Q ss_pred             EEEcCChhHHHHHHhcCC-ceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          217 IGVDRSSKRFEEAKKFGV-TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       217 ~~~~~~~~~~~~~~~lg~-~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +++. |+...++.+++|+ +.|+.|++        +..+....--+++|+.|+.+.....-+.+...--..+.+|...
T Consensus       166 vglT-S~~N~~Fve~lg~Yd~V~~Yd~--------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th  234 (314)
T PF11017_consen  166 VGLT-SARNVAFVESLGCYDEVLTYDD--------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH  234 (314)
T ss_pred             EEEe-cCcchhhhhccCCceEEeehhh--------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence            9995 5666679999998 56777654        3344334668999999998888888888887534566777653

>PLN02494 adenosylhomocysteinase

Probab=98.05  E-value=4.9e-05  Score=72.58  Aligned_cols=102  Identities=21%  Similarity=0.285  Sum_probs=78.8

Q ss_pred             hhhhhhccCC-CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHc
Q 017336          177 LGATLNVAKP-ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       177 ~~~l~~~~~~-~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~  255 (373)
                      +.++.+..++ -.|++|+|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|...+ +       ..+.+    
T Consensus       241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv-~-------leEal----  307 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL-T-------LEDVV----  307 (477)
T ss_pred             HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec-c-------HHHHH----
Confidence            3344444443 579999999999999999999999999 89999998887777777776522 1       22222    


Q ss_pred             CCCccEEEEccCChHhH-HHHHHHhhcCCcEEEEEcCCC
Q 017336          256 NGGVDRSVECTGNIDNM-ISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       256 ~~~~d~vid~~g~~~~~-~~~~~~l~~~~g~~v~~g~~~  293 (373)
                       ...|+++++.|....+ ...++.|+++ +.++.+|...
T Consensus       308 -~~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~~  344 (477)
T PLN02494        308 -SEADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHFD  344 (477)
T ss_pred             -hhCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCCC
Confidence             1479999999986654 7899999997 9999998853

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=98.01  E-value=0.00011  Score=65.73  Aligned_cols=131  Identities=20%  Similarity=0.182  Sum_probs=81.1

Q ss_pred             ceeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcC
Q 017336          142 TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR  221 (373)
Q Consensus       142 ~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~  221 (373)
                      +|.+|.. +...++.+++.+++-.+. .+.+.. ....+.  ..+.++++||-+|+|. |.+++.+++ .|+.+|++++.
T Consensus        78 ~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi  150 (250)
T PRK00517         78 SWEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI  150 (250)
T ss_pred             CCcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence            4555543 556778888877655433 111111 111111  1256889999999987 887776554 67767999999


Q ss_pred             ChhHHHHHHhc----CCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh---HhHHHHHHHhhcCCcEEEEEcCC
Q 017336          222 SSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       222 ~~~~~~~~~~l----g~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ++...+.+++.    +....+.....+            ..||+|+......   ..+..+.+.|+++ |++++.|..
T Consensus       151 s~~~l~~A~~n~~~~~~~~~~~~~~~~------------~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~  215 (250)
T PRK00517        151 DPQAVEAARENAELNGVELNVYLPQGD------------LKADVIVANILANPLLELAPDLARLLKPG-GRLILSGIL  215 (250)
T ss_pred             CHHHHHHHHHHHHHcCCCceEEEccCC------------CCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECc
Confidence            99888877652    221101100000            1589998765432   3466888999997 999987654

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.00  E-value=2.4e-05  Score=72.21  Aligned_cols=108  Identities=24%  Similarity=0.240  Sum_probs=77.3

Q ss_pred             CceEeCCCCCCchhhhhcccchhhhhhhhhhccCC----CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHH-
Q 017336          152 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP----ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF-  226 (373)
Q Consensus       152 ~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~----~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~-  226 (373)
                      +..+++|+.+..+.++... +...++.++. .+..    -++++|+|+|+|.+|..+++.++..|..+|++++++.++. 
T Consensus       139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~-~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~  216 (311)
T cd05213         139 QKAIKVGKRVRTETGISRG-AVSISSAAVE-LAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAE  216 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCC-CcCHHHHHHH-HHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence            3567788888877776654 5666666643 3332    3789999999999999999999988877899999998764 


Q ss_pred             HHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHh
Q 017336          227 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN  271 (373)
Q Consensus       227 ~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  271 (373)
                      ++++++|.. +++.+        .+.+.. ..+|+||.|++.+..
T Consensus       217 ~la~~~g~~-~~~~~--------~~~~~l-~~aDvVi~at~~~~~  251 (311)
T cd05213         217 ELAKELGGN-AVPLD--------ELLELL-NEADVVISATGAPHY  251 (311)
T ss_pred             HHHHHcCCe-EEeHH--------HHHHHH-hcCCEEEECCCCCch
Confidence            677788874 33211        122221 258999999998655

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.86  E-value=9.8e-05  Score=62.72  Aligned_cols=99  Identities=19%  Similarity=0.314  Sum_probs=75.7

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChh----HHHHHHhcCCceeec-CCCCCccHHHHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK----RFEEAKKFGVTDFVN-TSEHDRPIQEVIAEM  254 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~----~~~~~~~lg~~~vi~-~~~~~~~~~~~~~~~  254 (373)
                      +.+...++++++||=+|+|. |+.++-+++..+  +|+.+++.++    .++.++.+|.+.|.. ..+....       .
T Consensus        64 m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G-------~  133 (209)
T COG2518          64 MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKG-------W  133 (209)
T ss_pred             HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccC-------C
Confidence            45778999999999999876 999999999888  8999999886    344456788865432 2222211       2


Q ss_pred             cCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEE
Q 017336          255 TNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       255 ~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      ... .||.|+-+.+-+......++.|+++ |+++.-
T Consensus       134 ~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~P  168 (209)
T COG2518         134 PEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIP  168 (209)
T ss_pred             CCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEE
Confidence            222 8999999988878888999999998 888764

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.86  E-value=1.3e-05  Score=80.26  Aligned_cols=98  Identities=23%  Similarity=0.275  Sum_probs=66.9

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC---------------------hhHHHHHHhcCCceeecCCC-
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS---------------------SKRFEEAKKFGVTDFVNTSE-  242 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~---------------------~~~~~~~~~lg~~~vi~~~~-  242 (373)
                      ...++++|+|+|+|+.|+++++.++..|+ +|++++..                     +.+++.++++|++..++... 
T Consensus       133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~  211 (564)
T PRK12771        133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG  211 (564)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence            46789999999999999999999999999 78888742                     35677888899887665433 


Q ss_pred             CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEE
Q 017336          243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       243 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      .+... +.+    ..++|+||+++|.+......+...... |.+..+
T Consensus       212 ~~~~~-~~~----~~~~D~Vi~AtG~~~~~~~~i~g~~~~-gv~~~~  252 (564)
T PRK12771        212 EDITL-EQL----EGEFDAVFVAIGAQLGKRLPIPGEDAA-GVLDAV  252 (564)
T ss_pred             CcCCH-HHH----HhhCCEEEEeeCCCCCCcCCCCCCccC-CcEEHH
Confidence            22111 111    226999999999854433333333333 444433

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.84  E-value=0.00023  Score=64.72  Aligned_cols=99  Identities=20%  Similarity=0.305  Sum_probs=72.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .+++++|+|.|.+|.+++..++.+|+ +|++++++.++.+.+.++|...+ .       + +.+.+... .+|+||++++
T Consensus       150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~-------~-~~l~~~l~-~aDiVint~P  218 (287)
T TIGR02853       150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-P-------L-NKLEEKVA-EIDIVINTIP  218 (287)
T ss_pred             CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c-------H-HHHHHHhc-cCCEEEECCC
Confidence            57899999999999999999999999 89999999888877777775422 1       1 12223322 6899999997


Q ss_pred             ChHhHHHHHHHhhcCCcEEEEEcCCCCCcee
Q 017336          268 NIDNMISAFECVHDGWGVAVLVGVPSKDAVF  298 (373)
Q Consensus       268 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~  298 (373)
                      ..-.-...++.++++ ..++.++.......+
T Consensus       219 ~~ii~~~~l~~~k~~-aliIDlas~Pg~tdf  248 (287)
T TIGR02853       219 ALVLTADVLSKLPKH-AVIIDLASKPGGTDF  248 (287)
T ss_pred             hHHhCHHHHhcCCCC-eEEEEeCcCCCCCCH
Confidence            633334667788886 888888776544433

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.83  E-value=0.00018  Score=67.99  Aligned_cols=99  Identities=22%  Similarity=0.192  Sum_probs=70.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      ++.+|+|+|+|.+|+.+++.++.+|+ +|++++++.++.+.+.+ ++.........     .+.+.+... .+|+||+++
T Consensus       166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~-----~~~l~~~l~-~aDvVI~a~  238 (370)
T TIGR00518       166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN-----AYEIEDAVK-RADLLIGAV  238 (370)
T ss_pred             CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC-----HHHHHHHHc-cCCEEEEcc
Confidence            45669999999999999999999999 79999999888777654 55432222211     122333322 689999997


Q ss_pred             C---C--hH-hHHHHHHHhhcCCcEEEEEcCCCC
Q 017336          267 G---N--ID-NMISAFECVHDGWGVAVLVGVPSK  294 (373)
Q Consensus       267 g---~--~~-~~~~~~~~l~~~~g~~v~~g~~~~  294 (373)
                      +   .  +. .....++.++++ +.++.++...+
T Consensus       239 ~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~G  271 (370)
T TIGR00518       239 LIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQG  271 (370)
T ss_pred             ccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCC
Confidence            3   2  22 246788889997 99999887543

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.79  E-value=0.00025  Score=67.97  Aligned_cols=101  Identities=22%  Similarity=0.268  Sum_probs=76.2

Q ss_pred             hhhhhccC-CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcC
Q 017336          178 GATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       178 ~~l~~~~~-~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~  256 (373)
                      .++++..+ .-.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+..+ +       +.+.+     
T Consensus       242 d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~-~-------leell-----  307 (476)
T PTZ00075        242 DGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQVV-T-------LEDVV-----  307 (476)
T ss_pred             HHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCceec-c-------HHHHH-----
Confidence            34444333 4579999999999999999999999999 89999888777655555665421 1       22222     


Q ss_pred             CCccEEEEccCChHhHH-HHHHHhhcCCcEEEEEcCCC
Q 017336          257 GGVDRSVECTGNIDNMI-SAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       257 ~~~d~vid~~g~~~~~~-~~~~~l~~~~g~~v~~g~~~  293 (373)
                      ...|+|+.++|....+. ..+..|+++ +.++.+|...
T Consensus       308 ~~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~d  344 (476)
T PTZ00075        308 ETADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHFD  344 (476)
T ss_pred             hcCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCCc
Confidence            25899999999877765 899999997 9999998764

>PRK08324 short chain dehydrogenase; Validated

Probab=97.72  E-value=0.0003  Score=72.18  Aligned_cols=138  Identities=22%  Similarity=0.286  Sum_probs=85.6

Q ss_pred             ceeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEc
Q 017336          142 TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD  220 (373)
Q Consensus       142 ~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~  220 (373)
                      ++++|..+++..++.+ +..+++++....          ......-+++++||+|+ |.+|..+++.+...|+ +|++++
T Consensus       386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~----------~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~  453 (681)
T PRK08324        386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQR----------MPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD  453 (681)
T ss_pred             hcCCccCCChhhhcce-eeehhhhhhhhc----------CCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence            5667777777666666 555555554211          00122336789999987 9999999999999999 899999


Q ss_pred             CChhHHHHHHh-cCC----ce-eecCCCCCccHHHHHHHHc--CCCccEEEEccCC------------------------
Q 017336          221 RSSKRFEEAKK-FGV----TD-FVNTSEHDRPIQEVIAEMT--NGGVDRSVECTGN------------------------  268 (373)
Q Consensus       221 ~~~~~~~~~~~-lg~----~~-vi~~~~~~~~~~~~~~~~~--~~~~d~vid~~g~------------------------  268 (373)
                      ++.++.+.+.+ ++.    .. ..|..+.+ .+.+.+.+..  .+++|++|++.|.                        
T Consensus       454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~-~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g  532 (681)
T PRK08324        454 LDEEAAEAAAAELGGPDRALGVACDVTDEA-AVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATG  532 (681)
T ss_pred             CCHHHHHHHHHHHhccCcEEEEEecCCCHH-HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence            98877665433 432    11 12332221 1222232221  2379999999982                        


Q ss_pred             -hHhHHHHHHHhhc---CCcEEEEEcCCC
Q 017336          269 -IDNMISAFECVHD---GWGVAVLVGVPS  293 (373)
Q Consensus       269 -~~~~~~~~~~l~~---~~g~~v~~g~~~  293 (373)
                       ...++.+.+.++.   + |+++.+++..
T Consensus       533 ~~~l~~~~~~~l~~~~~~-g~iV~vsS~~  560 (681)
T PRK08324        533 HFLVAREAVRIMKAQGLG-GSIVFIASKN  560 (681)
T ss_pred             HHHHHHHHHHHHHhcCCC-cEEEEECCcc
Confidence             1224455666665   4 7899988753

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.58  E-value=0.00032  Score=56.25  Aligned_cols=73  Identities=26%  Similarity=0.356  Sum_probs=53.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCc--eeecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~--~vi~~~~~~~~~~~~~~~~~~~~~d~vid  264 (373)
                      .++++||+|+|++|.+++..+...|+++|+++.|+.+|.+.+. +++..  .++.+++    +.    +.. ..+|+||+
T Consensus        11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~----~~----~~~-~~~DivI~   81 (135)
T PF01488_consen   11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED----LE----EAL-QEADIVIN   81 (135)
T ss_dssp             TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG----HC----HHH-HTESEEEE
T ss_pred             CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH----HH----HHH-hhCCeEEE
Confidence            5899999999999999999999999988999999988876664 45332  1333322    11    111 26999999


Q ss_pred             ccCCh
Q 017336          265 CTGNI  269 (373)
Q Consensus       265 ~~g~~  269 (373)
                      |++.+
T Consensus        82 aT~~~   86 (135)
T PF01488_consen   82 ATPSG   86 (135)
T ss_dssp             -SSTT
T ss_pred             ecCCC
Confidence            98875

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.54  E-value=0.00019  Score=69.10  Aligned_cols=160  Identities=20%  Similarity=0.182  Sum_probs=95.7

Q ss_pred             cccccceEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccC
Q 017336           60 IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLG  139 (373)
Q Consensus        60 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~  139 (373)
                      --|+|.++-+.+|+++.++.     |++.+.. |   .+|+ +.++.|......   |..                   -
T Consensus        91 ~~g~ea~~hl~~V~~GldS~-----V~GE~qI-l---gQvk-~a~~~a~~~g~~---g~~-------------------l  138 (423)
T PRK00045         91 HEGEEAVRHLFRVASGLDSM-----VLGEPQI-L---GQVK-DAYALAQEAGTV---GTI-------------------L  138 (423)
T ss_pred             cCCHHHHHHHHHHHhhhhhh-----hcCChHH-H---HHHH-HHHHHHHHcCCc---hHH-------------------H
Confidence            35999999999999998774     4433333 3   3333 333344332222   111                   0


Q ss_pred             CcceeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhcc---CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEE
Q 017336          140 TSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA---KPERGSSVAVFGLGAVGLAAAEGARIAGASRI  216 (373)
Q Consensus       140 ~G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~---~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V  216 (373)
                      .+.|++.+        ++|+.+..+.+. ...+.+.++.++....   ...++++|+|+|+|.+|.++++.++..|+.+|
T Consensus       139 ~~lf~~a~--------~~~k~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V  209 (423)
T PRK00045        139 NRLFQKAF--------SVAKRVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKI  209 (423)
T ss_pred             HHHHHHHH--------HHHhhHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeE
Confidence            13454433        334433322221 1224455555532221   12578999999999999999999999998789


Q ss_pred             EEEcCChhHHH-HHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 017336          217 IGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  270 (373)
Q Consensus       217 ~~~~~~~~~~~-~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  270 (373)
                      ++++++.++.+ +++++|.+ +++.        +.+.+.. .++|+||+|++++.
T Consensus       210 ~v~~r~~~ra~~la~~~g~~-~~~~--------~~~~~~l-~~aDvVI~aT~s~~  254 (423)
T PRK00045        210 TVANRTLERAEELAEEFGGE-AIPL--------DELPEAL-AEADIVISSTGAPH  254 (423)
T ss_pred             EEEeCCHHHHHHHHHHcCCc-EeeH--------HHHHHHh-ccCCEEEECCCCCC
Confidence            99999988755 66777754 3221        1122222 26899999999764

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.51  E-value=0.0004  Score=63.34  Aligned_cols=97  Identities=22%  Similarity=0.277  Sum_probs=64.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCce-eecCCCCCccHHHHHHHHcCCCcc
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTD-FVNTSEHDRPIQEVIAEMTNGGVD  260 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l----g~~~-vi~~~~~~~~~~~~~~~~~~~~~d  260 (373)
                      ..++++||-+|+|. |..++.+++ .|+.+|++++.++...+.+++.    +... +......       ......++||
T Consensus       157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~-------~~~~~~~~fD  227 (288)
T TIGR00406       157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIY-------LEQPIEGKAD  227 (288)
T ss_pred             cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecc-------cccccCCCce
Confidence            45789999999987 777777665 5766999999999887777652    2211 1111110       1112234899


Q ss_pred             EEEEccCCh---HhHHHHHHHhhcCCcEEEEEcCC
Q 017336          261 RSVECTGNI---DNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       261 ~vid~~g~~---~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      +|+......   ..+..+.+.|+++ |.+++.|..
T Consensus       228 lVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~  261 (288)
T TIGR00406       228 VIVANILAEVIKELYPQFSRLVKPG-GWLILSGIL  261 (288)
T ss_pred             EEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence            998755432   4566788999997 999887654

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.41  E-value=0.0017  Score=54.08  Aligned_cols=104  Identities=21%  Similarity=0.348  Sum_probs=72.5

Q ss_pred             hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCceeecCCCCCccHHHHHHHHcCC
Q 017336          182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMTNG  257 (373)
Q Consensus       182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~vi~~~~~~~~~~~~~~~~~~~  257 (373)
                      .+.++++++.++=+|+|. |..++++++..-..+|+++++++++.+..+    +||.+.+......   ..+.+....  
T Consensus        28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~---Ap~~L~~~~--  101 (187)
T COG2242          28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGD---APEALPDLP--  101 (187)
T ss_pred             HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEecc---chHhhcCCC--
Confidence            456788999777778865 677788886555559999999999888774    5888764332222   112222211  


Q ss_pred             CccEEEEccCC--hHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          258 GVDRSVECTGN--IDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       258 ~~d~vid~~g~--~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      .+|.+|---|.  ++.++.++..|+++ |++|.-...
T Consensus       102 ~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nait  137 (187)
T COG2242         102 SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAIT  137 (187)
T ss_pred             CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEeec
Confidence            58999986553  25788999999997 999876443

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.35  E-value=0.0027  Score=54.51  Aligned_cols=102  Identities=23%  Similarity=0.409  Sum_probs=70.2

Q ss_pred             hccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHH----hcCC-ceeecCCCCCccHHHHHHHHc
Q 017336          182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAK----KFGV-TDFVNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~----~lg~-~~vi~~~~~~~~~~~~~~~~~  255 (373)
                      ....+.++++||-+|+|. |..++.+++..+. .+|++++.+++..+.++    .++. +.+.....+   ..+.+.. .
T Consensus        34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d---~~~~l~~-~  108 (198)
T PRK00377         34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGE---APEILFT-I  108 (198)
T ss_pred             HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEec---hhhhHhh-c
Confidence            346788999999999988 8888999887642 38999999998887664    3562 332211111   2222222 2


Q ss_pred             CCCccEEEEccCC---hHhHHHHHHHhhcCCcEEEEE
Q 017336          256 NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       256 ~~~~d~vid~~g~---~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      .+.+|.||...+.   ...+..+.+.|+++ |+++..
T Consensus       109 ~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~  144 (198)
T PRK00377        109 NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID  144 (198)
T ss_pred             CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence            2479999986543   35678889999997 998863

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.33  E-value=0.0019  Score=59.60  Aligned_cols=102  Identities=23%  Similarity=0.276  Sum_probs=72.2

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHH----hcCCceeecCCCCCccHHHHHHHHc
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~----~lg~~~vi~~~~~~~~~~~~~~~~~  255 (373)
                      .+...++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++    +.|.+.+..... +  ..+....  
T Consensus        73 l~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g-D--~~~~~~~--  146 (322)
T PRK13943         73 MEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG-D--GYYGVPE--  146 (322)
T ss_pred             HHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC-C--hhhcccc--
Confidence            455678899999999998 49999999998763 36999999988766554    466654432222 1  2111111  


Q ss_pred             CCCccEEEEccCChHhHHHHHHHhhcCCcEEEEE
Q 017336          256 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       256 ~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      .+.+|+|+.+.+.+.......+.|+++ |+++..
T Consensus       147 ~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~  179 (322)
T PRK13943        147 FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP  179 (322)
T ss_pred             cCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence            136999999988767777889999997 987763

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.32  E-value=0.0035  Score=56.62  Aligned_cols=77  Identities=21%  Similarity=0.381  Sum_probs=54.2

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHc--CCCccEEEEc
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRSVEC  265 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~--~~~~d~vid~  265 (373)
                      +++||+|+ |.+|...++.+...|+ +|++++++.++.+.+.+.+...+ .|..+.+ .+.+.+....  .+++|++|++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~id~vi~~   79 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVNDGA-ALARLAEELEAEHGGLDVLINN   79 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCCHH-HHHHHHHHHHHhcCCCCEEEEC
Confidence            57999997 8999999999999999 89999898887777766665433 3443321 1333333322  2379999999


Q ss_pred             cCC
Q 017336          266 TGN  268 (373)
Q Consensus       266 ~g~  268 (373)
                      .|.
T Consensus        80 ag~   82 (274)
T PRK05693         80 AGY   82 (274)
T ss_pred             CCC
Confidence            883

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.31  E-value=0.0017  Score=56.37  Aligned_cols=79  Identities=20%  Similarity=0.366  Sum_probs=57.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCC----ceeecCCCCCccHHHHHHHHcCC--Cc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGV----TDFVNTSEHDRPIQEVIAEMTNG--GV  259 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~----~~vi~~~~~~~~~~~~~~~~~~~--~~  259 (373)
                      .++.++|+|+ +++|.++++.+...|+ +|+.+.|..++++.+. +++.    ...+|..+.. +....+..+...  .+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~-~~~~~i~~~~~~~g~i   82 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTDRA-AVEAAIEALPEEFGRI   82 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCCHH-HHHHHHHHHHHhhCcc
Confidence            3578999998 8999999999999999 8999999999888775 4772    1234433321 233444444444  69


Q ss_pred             cEEEEccCC
Q 017336          260 DRSVECTGN  268 (373)
Q Consensus       260 d~vid~~g~  268 (373)
                      |++++..|.
T Consensus        83 DiLvNNAGl   91 (246)
T COG4221          83 DILVNNAGL   91 (246)
T ss_pred             cEEEecCCC
Confidence            999998874

>PRK06182 short chain dehydrogenase; Validated

Probab=97.27  E-value=0.004  Score=56.24  Aligned_cols=79  Identities=20%  Similarity=0.389  Sum_probs=54.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHc--CCCccEEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRSV  263 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~--~~~~d~vi  263 (373)
                      ++++++|+|+ |.+|...++.+...|+ +|++++++.++++.+.+.++..+ .|..+.+ .+.+.+.+..  .+++|++|
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~~~id~li   79 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTDEA-SIKAAVDTIIAEEGRIDVLV   79 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCCHH-HHHHHHHHHHHhcCCCCEEE
Confidence            3678999997 8999999999888999 89999898887766655555432 3433321 1323333221  23799999


Q ss_pred             EccCC
Q 017336          264 ECTGN  268 (373)
Q Consensus       264 d~~g~  268 (373)
                      ++.|.
T Consensus        80 ~~ag~   84 (273)
T PRK06182         80 NNAGY   84 (273)
T ss_pred             ECCCc
Confidence            99874

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.24  E-value=0.0021  Score=61.07  Aligned_cols=108  Identities=22%  Similarity=0.242  Sum_probs=74.4

Q ss_pred             hhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHH
Q 017336          174 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE  253 (373)
Q Consensus       174 ~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~  253 (373)
                      ...+..+.+...++++++||-+|+| .|..++.+++..|+ +|++++.+++..+.+++.....-+.....+  +    .+
T Consensus       153 ~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~~D--~----~~  224 (383)
T PRK11705        153 EAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRLQD--Y----RD  224 (383)
T ss_pred             HHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEECc--h----hh
Confidence            3444455677788999999999986 46778888888898 899999999999988774321111111111  1    11


Q ss_pred             HcCCCccEEEEc-----cCC---hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          254 MTNGGVDRSVEC-----TGN---IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       254 ~~~~~~d~vid~-----~g~---~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      . .+.||.|+..     +|.   ...++.+.+.|+|+ |.+++...
T Consensus       225 l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~i  268 (383)
T PRK11705        225 L-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHTI  268 (383)
T ss_pred             c-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEEc
Confidence            1 3479998753     333   25678899999997 99987644

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.24  E-value=0.0038  Score=52.81  Aligned_cols=81  Identities=17%  Similarity=0.289  Sum_probs=58.9

Q ss_pred             CCCCEEEEECC--CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCce-eecCCCCC--ccHHHHHHHHcCCCcc
Q 017336          187 ERGSSVAVFGL--GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FVNTSEHD--RPIQEVIAEMTNGGVD  260 (373)
Q Consensus       187 ~~~~~vlI~G~--g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~~-vi~~~~~~--~~~~~~~~~~~~~~~d  260 (373)
                      ...+.|||+|+  |++|++.+.=..+.|+ .|+++.++-++..-+. ++|... -+|..+++  ..+...++..+.|+.|
T Consensus         5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld   83 (289)
T KOG1209|consen    5 SQPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLD   83 (289)
T ss_pred             cCCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceE
Confidence            35678999975  8999998888888999 8999999877766665 778643 24443332  1244456666777999


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      +.++..|.
T Consensus        84 ~L~NNAG~   91 (289)
T KOG1209|consen   84 LLYNNAGQ   91 (289)
T ss_pred             EEEcCCCC
Confidence            99997775

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.21  E-value=0.0074  Score=53.10  Aligned_cols=103  Identities=24%  Similarity=0.372  Sum_probs=66.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-Hhc---CCceee--cCCCCCccHHHHHHHHc--CCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF---GVTDFV--NTSEHDRPIQEVIAEMT--NGG  258 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~l---g~~~vi--~~~~~~~~~~~~~~~~~--~~~  258 (373)
                      ++++|||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +++   +....+  |..+.+ .+.+.+.+..  -++
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~   81 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTE-SARNVIEKAAKVLNA   81 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHH-HHHHHHHHHHHHhCC
Confidence            4689999987 8999999999999999 899999988776555 222   221222  222211 1222222221  136


Q ss_pred             ccEEEEccCChH-----------------------hHHHHHHHhhcCCcEEEEEcCCC
Q 017336          259 VDRSVECTGNID-----------------------NMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       259 ~d~vid~~g~~~-----------------------~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +|.++.+.+...                       .++..++.+.++ |+++.++...
T Consensus        82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~  138 (238)
T PRK05786         82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSMS  138 (238)
T ss_pred             CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecch
Confidence            899999887421                       144555666776 8999888753

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.0039  Score=56.50  Aligned_cols=78  Identities=18%  Similarity=0.307  Sum_probs=55.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHH---HHHHHcCCCccEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQE---VIAEMTNGGVDRS  262 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~---~~~~~~~~~~d~v  262 (373)
                      .++++||+|+ |.+|...++.+...|+ +|++++++.++.+.+.+.+...+ .|..+.. .+.+   .+.+...+.+|++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~~~g~id~l   80 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAEPE-SIAALVAQVLELSGGRLDAL   80 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCCHH-HHHHHHHHHHHHcCCCccEE
Confidence            4678999998 8999999999888999 89999999888887777665443 3433321 1222   2223334579999


Q ss_pred             EEccC
Q 017336          263 VECTG  267 (373)
Q Consensus       263 id~~g  267 (373)
                      |++.|
T Consensus        81 i~~Ag   85 (277)
T PRK05993         81 FNNGA   85 (277)
T ss_pred             EECCC
Confidence            99876

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.08  E-value=0.0034  Score=52.84  Aligned_cols=79  Identities=22%  Similarity=0.322  Sum_probs=57.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc---eeecCCCCC--ccHHHHHHHHcCCCccE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT---DFVNTSEHD--RPIQEVIAEMTNGGVDR  261 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~---~vi~~~~~~--~~~~~~~~~~~~~~~d~  261 (373)
                      .|.+|||+|+ +++|++.++-...+|= +|+++.|++++++.+++....   .|.|..+.+  ..+.+.+++..+ ..++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNv   81 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNV   81 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhe
Confidence            4679999976 8999998888888886 999999999999998875442   244443322  225555555443 5899


Q ss_pred             EEEccCC
Q 017336          262 SVECTGN  268 (373)
Q Consensus       262 vid~~g~  268 (373)
                      ++++.|-
T Consensus        82 liNNAGI   88 (245)
T COG3967          82 LINNAGI   88 (245)
T ss_pred             eeecccc
Confidence            9998874

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=97.05  E-value=0.0018  Score=58.44  Aligned_cols=100  Identities=24%  Similarity=0.288  Sum_probs=63.6

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-e-ecCCCCCccHHHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F-VNTSEHDRPIQEVIAE  253 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-v-i~~~~~~~~~~~~~~~  253 (373)
                      +.+++++++|++||-+|+| -|..++.+|+..|+ +|++++.++++.+.++    +.|... + +...+    +    ++
T Consensus        54 ~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D----~----~~  123 (273)
T PF02353_consen   54 LCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQD----Y----RD  123 (273)
T ss_dssp             HHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-----G----GG
T ss_pred             HHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEee----c----cc
Confidence            5678899999999999998 47778889998999 8999999999888775    456432 1 11111    1    11


Q ss_pred             HcCCCccEEEEc-----cCC---hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          254 MTNGGVDRSVEC-----TGN---IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       254 ~~~~~~d~vid~-----~g~---~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      .. +.||.|+..     +|.   +.++..+.+.|+|+ |++++-..
T Consensus       124 ~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i  167 (273)
T PF02353_consen  124 LP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTI  167 (273)
T ss_dssp             ----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEE
T ss_pred             cC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEec
Confidence            21 279998763     432   35688999999997 99976543

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.03  E-value=0.011  Score=48.37  Aligned_cols=92  Identities=28%  Similarity=0.287  Sum_probs=60.8

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      .-.|++++|+|-|.+|.-.++.++.+|+ +|++++.++-+.-.+..-|... ..           +.+.. ...|++|.+
T Consensus        20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v-~~-----------~~~a~-~~adi~vta   85 (162)
T PF00670_consen   20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEV-MT-----------LEEAL-RDADIFVTA   85 (162)
T ss_dssp             --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EE-E------------HHHHT-TT-SEEEE-
T ss_pred             eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEe-cC-----------HHHHH-hhCCEEEEC
Confidence            4578999999999999999999999999 9999999987766665556542 21           22222 257999999


Q ss_pred             cCChHh-HHHHHHHhhcCCcEEEEEcCC
Q 017336          266 TGNIDN-MISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       266 ~g~~~~-~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      +|..+. -.+.++.|+++ ..+...|..
T Consensus        86 TG~~~vi~~e~~~~mkdg-ail~n~Gh~  112 (162)
T PF00670_consen   86 TGNKDVITGEHFRQMKDG-AILANAGHF  112 (162)
T ss_dssp             SSSSSSB-HHHHHHS-TT-EEEEESSSS
T ss_pred             CCCccccCHHHHHHhcCC-eEEeccCcC
Confidence            998664 45788899986 555555544

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=97.01  E-value=0.0015  Score=56.48  Aligned_cols=102  Identities=22%  Similarity=0.290  Sum_probs=66.9

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCc-EEEEEcCChhHHHHH----HhcCCceee-cCCCCCccHHHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEA----KKFGVTDFV-NTSEHDRPIQEVIAE  253 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~-~V~~~~~~~~~~~~~----~~lg~~~vi-~~~~~~~~~~~~~~~  253 (373)
                      +.+...++++++||-+|+|. |+.++.+++..|.. +|+.+++.++-.+.+    ++++.+.+. ...+....+      
T Consensus        64 ~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~------  136 (209)
T PF01135_consen   64 MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGW------  136 (209)
T ss_dssp             HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTT------
T ss_pred             HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhcc------
Confidence            45667799999999999875 78888888877643 699999887654444    456765432 111111001      


Q ss_pred             HcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEE
Q 017336          254 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       254 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      ...++||.|+-+.+-+......++.|+++ |+++.-
T Consensus       137 ~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p  171 (209)
T PF01135_consen  137 PEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP  171 (209)
T ss_dssp             GGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred             ccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence            11237999999988877778999999997 999873

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK12742 oxidoreductase; Provisional

Probab=97.00  E-value=0.016  Score=50.88  Aligned_cols=101  Identities=21%  Similarity=0.292  Sum_probs=62.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHHHHH-HhcCCcee-ecCCCCCccHHHHHHHHcCCCccEEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA-KKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSV  263 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~-~~~~~~~~-~~lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vi  263 (373)
                      ++++|||+|+ |.+|..+++.+...|+ +|+.+.+ ++++.+.+ .+++...+ .|..+. ..+.+.+.+.  +++|++|
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~-~~~~~~~~~~--~~id~li   80 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSADR-DAVIDVVRKS--GALDILV   80 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCCH-HHHHHHHHHh--CCCcEEE
Confidence            4689999997 8999999999999999 6766644 44444433 44565432 232221 1133333222  3699999


Q ss_pred             EccCChH-------------------------hHHHHHHHhhcCCcEEEEEcCCC
Q 017336          264 ECTGNID-------------------------NMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       264 d~~g~~~-------------------------~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      ++.|...                         ....+...++.. |+++.++...
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~~  134 (237)
T PRK12742         81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSVN  134 (237)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEeccc
Confidence            9987420                         012334455665 8999887654

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.99  E-value=0.0063  Score=51.29  Aligned_cols=90  Identities=31%  Similarity=0.377  Sum_probs=63.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      -.+++|.|+|.|.+|...++.++.+|+ +|++.+++..........+...    .+    +.+.+.     ..|+|+.+.
T Consensus        34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~----~~----l~ell~-----~aDiv~~~~   99 (178)
T PF02826_consen   34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY----VS----LDELLA-----QADIVSLHL   99 (178)
T ss_dssp             STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE----SS----HHHHHH-----H-SEEEE-S
T ss_pred             cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee----ee----hhhhcc-----hhhhhhhhh
Confidence            468999999999999999999999999 9999999887766455555522    11    333333     369999887


Q ss_pred             CChH-----hHHHHHHHhhcCCcEEEEEcC
Q 017336          267 GNID-----NMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       267 g~~~-----~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ...+     +-...+..|+++ ..+|.++-
T Consensus       100 plt~~T~~li~~~~l~~mk~g-a~lvN~aR  128 (178)
T PF02826_consen  100 PLTPETRGLINAEFLAKMKPG-AVLVNVAR  128 (178)
T ss_dssp             SSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred             ccccccceeeeeeeeeccccc-eEEEeccc
Confidence            6321     234678888886 77776644

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.99  E-value=0.0025  Score=48.94  Aligned_cols=94  Identities=24%  Similarity=0.261  Sum_probs=62.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHH-HcCCcEEEEEcCChhHHHHHHhc----CC-ceeecCCCCCccHHHHHHHHcCCCccE
Q 017336          188 RGSSVAVFGLGAVGLAAAEGAR-IAGASRIIGVDRSSKRFEEAKKF----GV-TDFVNTSEHDRPIQEVIAEMTNGGVDR  261 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~-~~g~~~V~~~~~~~~~~~~~~~l----g~-~~vi~~~~~~~~~~~~~~~~~~~~~d~  261 (373)
                      |+++||-+|+|. |..++.+++ ..++ +|++++.+++..+.+++.    +. +.+- ....+  + . ......++||+
T Consensus         1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~-~~~~d--~-~-~~~~~~~~~D~   73 (112)
T PF12847_consen    1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRIT-FVQGD--A-E-FDPDFLEPFDL   73 (112)
T ss_dssp             TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEE-EEESC--C-H-GGTTTSSCEEE
T ss_pred             CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeE-EEECc--c-c-cCcccCCCCCE
Confidence            678999999876 777888888 4677 899999999988887653    22 2221 11111  1 0 11111237999


Q ss_pred             EEEcc-CCh---------HhHHHHHHHhhcCCcEEEEE
Q 017336          262 SVECT-GNI---------DNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       262 vid~~-g~~---------~~~~~~~~~l~~~~g~~v~~  289 (373)
                      |+... ...         ..++...+.|+|+ |++++-
T Consensus        74 v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~  110 (112)
T PF12847_consen   74 VICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN  110 (112)
T ss_dssp             EEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence            99877 221         2378899999997 988763

...

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.98  E-value=0.0097  Score=50.11  Aligned_cols=94  Identities=22%  Similarity=0.309  Sum_probs=64.1

Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCC--
Q 017336          192 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN--  268 (373)
Q Consensus       192 vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~--  268 (373)
                      |+|+|+ |.+|...++.+...|. +|+++.|++++.+.  ..+++.+ ..+-.+  . +.+.+... ++|+||+++|.  
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~-~~d~~d--~-~~~~~al~-~~d~vi~~~~~~~   72 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEII-QGDLFD--P-DSVKAALK-GADAVIHAAGPPP   72 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEE-ESCTTC--H-HHHHHHHT-TSSEEEECCHSTT
T ss_pred             eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccc-eeeehh--h-hhhhhhhh-hcchhhhhhhhhc
Confidence            789998 9999999999999997 89999999988776  4455433 222222  2 33444444 79999999984  


Q ss_pred             --hHhHHHHHHHhhcC-CcEEEEEcCCC
Q 017336          269 --IDNMISAFECVHDG-WGVAVLVGVPS  293 (373)
Q Consensus       269 --~~~~~~~~~~l~~~-~g~~v~~g~~~  293 (373)
                        .......++.++.. -.+++.++...
T Consensus        73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~~  100 (183)
T PF13460_consen   73 KDVDAAKNIIEAAKKAGVKRVVYLSSAG  100 (183)
T ss_dssp             THHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred             ccccccccccccccccccccceeeeccc
Confidence              23455555655443 14777776543

...

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.93  E-value=0.011  Score=55.66  Aligned_cols=95  Identities=17%  Similarity=0.251  Sum_probs=66.3

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC---Cce-eecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG---VTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg---~~~-vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      ++|||+|+|.+|+.+++.+.+.+-.+|++++++.++.+.+....   .+. .+|..+.     +.+.++.. ++|+||++
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~-----~al~~li~-~~d~VIn~   75 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADV-----DALVALIK-DFDLVINA   75 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccCh-----HHHHHHHh-cCCEEEEe
Confidence            57999999999999999988888459999999999988887764   322 3444332     23334333 45999999


Q ss_pred             cCChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          266 TGNIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       266 ~g~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      .+..-....+-.|++.+ =.++....
T Consensus        76 ~p~~~~~~i~ka~i~~g-v~yvDts~  100 (389)
T COG1748          76 APPFVDLTILKACIKTG-VDYVDTSY  100 (389)
T ss_pred             CCchhhHHHHHHHHHhC-CCEEEccc
Confidence            98755555555666664 44544443

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=96.93  E-value=0.016  Score=52.01  Aligned_cols=108  Identities=23%  Similarity=0.308  Sum_probs=77.8

Q ss_pred             hhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc-ee-ecCCCCCccHHH
Q 017336          176 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DF-VNTSEHDRPIQE  249 (373)
Q Consensus       176 a~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~-~v-i~~~~~~~~~~~  249 (373)
                      ++..+.++.+++||++||=+|+|- |.+++-+|+..|+ +|++++-|+++.+.+++    .|.. .+ +...+       
T Consensus        60 k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d-------  130 (283)
T COG2230          60 KLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQD-------  130 (283)
T ss_pred             HHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecc-------
Confidence            444567889999999999999987 7778889999999 99999999988777654    5654 21 11111       


Q ss_pred             HHHHHcCCCccEEEE-----ccCC---hHhHHHHHHHhhcCCcEEEEEcCCCCC
Q 017336          250 VIAEMTNGGVDRSVE-----CTGN---IDNMISAFECVHDGWGVAVLVGVPSKD  295 (373)
Q Consensus       250 ~~~~~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~~g~~v~~g~~~~~  295 (373)
                       .+... +.||.|+.     .+|.   +.++..+.+.|+++ |++.+.......
T Consensus       131 -~rd~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~  181 (283)
T COG2230         131 -YRDFE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPD  181 (283)
T ss_pred             -ccccc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCC
Confidence             11111 24777765     3443   36788999999997 999988776544

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.92  E-value=0.0086  Score=52.00  Aligned_cols=101  Identities=25%  Similarity=0.318  Sum_probs=68.9

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHh----cCCcee--ecCCCCCccHHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHDRPIQEVIA  252 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~----lg~~~v--i~~~~~~~~~~~~~~  252 (373)
                      +.....++++++||-+|+|. |..+..+++..+. .+|++++.+++-.+.+++    .|...+  +.-+... .+     
T Consensus        68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~-~~-----  140 (212)
T PRK13942         68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTL-GY-----  140 (212)
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc-CC-----
Confidence            34566788999999999875 6677777777653 289999999887766654    454322  2111110 01     


Q ss_pred             HHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEE
Q 017336          253 EMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       253 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                       ...+.||+|+-....+.......+.|+++ |+++..
T Consensus       141 -~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~  175 (212)
T PRK13942        141 -EENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP  175 (212)
T ss_pred             -CcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence             11237999987666557778899999997 998774

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.89  E-value=0.018  Score=56.94  Aligned_cols=106  Identities=17%  Similarity=0.155  Sum_probs=67.3

Q ss_pred             hhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c--------CC------cee-ecCCCC
Q 017336          181 LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F--------GV------TDF-VNTSEH  243 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-l--------g~------~~v-i~~~~~  243 (373)
                      -...+.+.+++|||+|+ |.+|..+++.+...|+ +|+++.++.++.+.+.+ +        |.      ..+ .|..+ 
T Consensus        72 ~~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD-  149 (576)
T PLN03209         72 PKELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK-  149 (576)
T ss_pred             ccccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCC-
Confidence            34566778999999998 9999999999988999 89988898877654322 1        21      111 22222 


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCChH---------------hHHHHHHHhhc-CCcEEEEEcCCC
Q 017336          244 DRPIQEVIAEMTNGGVDRSVECTGNID---------------NMISAFECVHD-GWGVAVLVGVPS  293 (373)
Q Consensus       244 ~~~~~~~~~~~~~~~~d~vid~~g~~~---------------~~~~~~~~l~~-~~g~~v~~g~~~  293 (373)
                         . +.+.+.. +++|+||++.|...               ....+++.+.. +.++||+++...
T Consensus       150 ---~-esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig  210 (576)
T PLN03209        150 ---P-DQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG  210 (576)
T ss_pred             ---H-HHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence               1 2333333 36999999987531               11233343333 236899888754

>TIGR00438 rrmJ cell division protein FtsJ

Probab=96.89  E-value=0.014  Score=49.52  Aligned_cols=100  Identities=19%  Similarity=0.152  Sum_probs=62.5

Q ss_pred             ccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHcCC-Cc
Q 017336          183 VAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNG-GV  259 (373)
Q Consensus       183 ~~~~~~~~~vlI~G~g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~~-~~  259 (373)
                      ...++++++||.+|+|.-+. +..+++.. +..+|++++.++.+    ...++..+ .+..+.  ...+.+.+..+. ++
T Consensus        27 ~~~i~~g~~VLDiG~GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~--~~~~~l~~~~~~~~~   99 (188)
T TIGR00438        27 FKLIKPGDTVLDLGAAPGGW-SQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDE--EVLNKIRERVGDDKV   99 (188)
T ss_pred             hcccCCCCEEEEecCCCCHH-HHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCCh--hHHHHHHHHhCCCCc
Confidence            35578999999999876444 44444443 43489999998754    11233322 122222  234445555544 89


Q ss_pred             cEEEEc-----cCC------------hHhHHHHHHHhhcCCcEEEEEc
Q 017336          260 DRSVEC-----TGN------------IDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       260 d~vid~-----~g~------------~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      |+|+..     .|.            ...+..+.++|+++ |+++...
T Consensus       100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~  146 (188)
T TIGR00438       100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV  146 (188)
T ss_pred             cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence            999952     121            24677889999997 9998753

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.88  E-value=0.0034  Score=52.39  Aligned_cols=102  Identities=22%  Similarity=0.215  Sum_probs=66.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec-CCCC--------------CccHHHHHH
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN-TSEH--------------DRPIQEVIA  252 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~-~~~~--------------~~~~~~~~~  252 (373)
                      +..+|+|+|+|.+|..|+.+++.+|+ +|++.+...++.+..+..+...+.. +.+.              .....+.+.
T Consensus        19 ~p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~   97 (168)
T PF01262_consen   19 PPAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA   97 (168)
T ss_dssp             -T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred             CCeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence            44889999999999999999999999 8999999999988888888765432 1111              011222233


Q ss_pred             HHcCCCccEEEEccCC-----hH-hHHHHHHHhhcCCcEEEEEcCC
Q 017336          253 EMTNGGVDRSVECTGN-----ID-NMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       253 ~~~~~~~d~vid~~g~-----~~-~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      +... .+|++|.+.-.     |. +.+..++.|+++ ..++.+..-
T Consensus        98 ~~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D  141 (168)
T PF01262_consen   98 EFIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCD  141 (168)
T ss_dssp             HHHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGG
T ss_pred             HHHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEec
Confidence            3322 47998864221     11 345778889986 778777653

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.88  E-value=0.018  Score=50.56  Aligned_cols=79  Identities=23%  Similarity=0.391  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcC----Ccee-ecCCCCCccHHHHHHHHc--CCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG----VTDF-VNTSEHDRPIQEVIAEMT--NGG  258 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg----~~~v-i~~~~~~~~~~~~~~~~~--~~~  258 (373)
                      +++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +++.    +..+ .|..+. ..+.+.+++..  .++
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   82 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDE-ADVQRAVDAIVAAFGG   82 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence            4688999987 8999999998888899 799998887665544 3332    1111 222221 11333333321  137


Q ss_pred             ccEEEEccCC
Q 017336          259 VDRSVECTGN  268 (373)
Q Consensus       259 ~d~vid~~g~  268 (373)
                      +|++|++.|.
T Consensus        83 ~d~vi~~ag~   92 (237)
T PRK07326         83 LDVLIANAGV   92 (237)
T ss_pred             CCEEEECCCC
Confidence            9999998764

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.88  E-value=0.012  Score=45.88  Aligned_cols=100  Identities=20%  Similarity=0.319  Sum_probs=67.2

Q ss_pred             hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCcee--ecCCCCCccHHHHHHHHc
Q 017336          182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~v--i~~~~~~~~~~~~~~~~~  255 (373)
                      ....+.++++||-+|+|. |..+..+++..+..+|++++.++...+.+++    ++...+  +..+..     .... ..
T Consensus        13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~-----~~~~-~~   85 (124)
T TIGR02469        13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAP-----EALE-DS   85 (124)
T ss_pred             HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEecccc-----ccCh-hh
Confidence            345566788899999977 8888889988754589999999888777643    444322  211110     0011 11


Q ss_pred             CCCccEEEEccCC---hHhHHHHHHHhhcCCcEEEEE
Q 017336          256 NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       256 ~~~~d~vid~~g~---~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      .+.+|+|+...+.   ...+..+.+.|+++ |++++.
T Consensus        86 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~  121 (124)
T TIGR02469        86 LPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLN  121 (124)
T ss_pred             cCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEE
Confidence            2379999976533   24788999999997 998865

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK14967 putative methyltransferase; Provisional

Probab=96.85  E-value=0.06  Score=47.11  Aligned_cols=97  Identities=24%  Similarity=0.173  Sum_probs=63.3

Q ss_pred             ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcCCC
Q 017336          183 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGG  258 (373)
Q Consensus       183 ~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~~~  258 (373)
                      ...+.++++||-.|+|. |..++.+++. ++.+|++++.+++..+.+++    .+....+..  .+  +.+.   ...+.
T Consensus        31 ~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~--~d--~~~~---~~~~~  101 (223)
T PRK14967         31 AEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR--GD--WARA---VEFRP  101 (223)
T ss_pred             hcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE--Cc--hhhh---ccCCC
Confidence            34567889999999987 8888888875 55589999999988776544    343321111  11  2221   12237


Q ss_pred             ccEEEEccCC---------------------------hHhHHHHHHHhhcCCcEEEEE
Q 017336          259 VDRSVECTGN---------------------------IDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       259 ~d~vid~~g~---------------------------~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      ||+|+...+.                           ..++..+.+.|+++ |+++++
T Consensus       102 fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~  158 (223)
T PRK14967        102 FDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLV  158 (223)
T ss_pred             eeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence            9999975210                           12456788899997 998865

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=96.81  E-value=0.0091  Score=53.16  Aligned_cols=79  Identities=23%  Similarity=0.343  Sum_probs=55.8

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-----cCCce-e--ecCCCCCccHHHHHHH-Hc-
Q 017336          187 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTD-F--VNTSEHDRPIQEVIAE-MT-  255 (373)
Q Consensus       187 ~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-----lg~~~-v--i~~~~~~~~~~~~~~~-~~-  255 (373)
                      ..++++||+|| +++|...+..+.+.|+ .|+.+.|+++|++.+++     .+... +  +|..+.+  -.+.+.. +. 
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~--~~~~l~~~l~~   80 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPE--ALERLEDELKE   80 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChh--HHHHHHHHHHh
Confidence            46789999998 8999999999999999 89999999999887753     33322 3  3433332  2233332 22 


Q ss_pred             C-CCccEEEEccCC
Q 017336          256 N-GGVDRSVECTGN  268 (373)
Q Consensus       256 ~-~~~d~vid~~g~  268 (373)
                      . ..+|+.+++.|-
T Consensus        81 ~~~~IdvLVNNAG~   94 (265)
T COG0300          81 RGGPIDVLVNNAGF   94 (265)
T ss_pred             cCCcccEEEECCCc
Confidence            2 279999999884

>PRK08017 oxidoreductase; Provisional

Probab=96.81  E-value=0.0095  Score=53.05  Aligned_cols=78  Identities=18%  Similarity=0.304  Sum_probs=55.1

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCC--ccHHHHHHHHcCCCccEEEEc
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHD--RPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~--~~~~~~~~~~~~~~~d~vid~  265 (373)
                      +++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+++.++..+ .|..+.+  .++.+.+.+...+.+|.++.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~   81 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence            57999998 9999999999999999 89999999888888877776543 3332221  112223333334578999988


Q ss_pred             cCC
Q 017336          266 TGN  268 (373)
Q Consensus       266 ~g~  268 (373)
                      .|.
T Consensus        82 ag~   84 (256)
T PRK08017         82 AGF   84 (256)
T ss_pred             CCC
Confidence            763

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.79  E-value=0.023  Score=49.80  Aligned_cols=79  Identities=22%  Similarity=0.300  Sum_probs=48.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHH----HHhcCCcee-ecCCCCCccHHHHHHHHc--CCCc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGV  259 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~----~~~lg~~~v-i~~~~~~~~~~~~~~~~~--~~~~  259 (373)
                      +++++||+|+ |.+|..+++.+.+.|+ +|+.++++.++...    +...+...+ .|..+.. ++.+.+.+..  -+++
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~   83 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQ-AARRAVDEVNRQFGRL   83 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHH-HHHHHHHHHHHHhCCc
Confidence            3689999997 9999999999988899 79999887655322    222333322 2222211 1222222221  1379


Q ss_pred             cEEEEccCC
Q 017336          260 DRSVECTGN  268 (373)
Q Consensus       260 d~vid~~g~  268 (373)
                      |+||++.|.
T Consensus        84 d~vi~~ag~   92 (239)
T PRK12828         84 DALVNIAGA   92 (239)
T ss_pred             CEEEECCcc
Confidence            999998773

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=96.77  E-value=0.014  Score=52.13  Aligned_cols=131  Identities=21%  Similarity=0.169  Sum_probs=88.4

Q ss_pred             ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCC---------CccHHHHHHH
Q 017336          183 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH---------DRPIQEVIAE  253 (373)
Q Consensus       183 ~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~---------~~~~~~~~~~  253 (373)
                      .+.-.++..+++.|.|..|++++..++..|+ .|...+....+.+..+++|+...-..+++         +.+|...-.+
T Consensus       158 Aagtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~  236 (356)
T COG3288         158 AAGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAE  236 (356)
T ss_pred             hcccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHH
Confidence            3455677889999999999999999999999 78887778888888888888653211211         1223333222


Q ss_pred             HcCC---CccEEEEccCCh------HhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh--cccceEEEEe
Q 017336          254 MTNG---GVDRSVECTGNI------DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV--LNERTLKGTF  315 (373)
Q Consensus       254 ~~~~---~~d~vid~~g~~------~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~--~~~~~i~g~~  315 (373)
                      +...   ++|+||-+.--|      -....++..|+|+ +.++.+....++..-...+-.+  .++.+|.|..
T Consensus       237 ~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~  308 (356)
T COG3288         237 LVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT  308 (356)
T ss_pred             HHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence            2222   799999874322      2356899999997 9999888765443322222222  2788888864

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.76  E-value=0.013  Score=51.78  Aligned_cols=77  Identities=23%  Similarity=0.393  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCcee-ecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vid  264 (373)
                      .+++++|+|+ |.+|...++.+...|+ +|++++++.++.+.+.+ .+...+ .|..+.+  ....+.+. .+++|++|+
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~--~v~~~~~~-~~~~d~vi~   83 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGDDA--AIRAALAA-AGAFDGLVN   83 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCCHH--HHHHHHHH-hCCCCEEEE
Confidence            4679999998 8999999999999999 79999888777655533 454332 2333221  22222222 237999999


Q ss_pred             ccCC
Q 017336          265 CTGN  268 (373)
Q Consensus       265 ~~g~  268 (373)
                      +.|.
T Consensus        84 ~ag~   87 (245)
T PRK07060         84 CAGI   87 (245)
T ss_pred             CCCC
Confidence            9874

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.75  E-value=0.011  Score=52.98  Aligned_cols=110  Identities=21%  Similarity=0.293  Sum_probs=68.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-ee----cCCCCCccHHHHHHHH--c
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV----NTSEHDRPIQEVIAEM--T  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-vi----~~~~~~~~~~~~~~~~--~  255 (373)
                      .++.|+|+|| +++|.+++--.-..|+ +++.+.+..++++.+    ++.+... ++    |-.+.+ +....+.+.  .
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~-~~~~~~~~~~~~   88 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEE-SVKKFVEWAIRH   88 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHH-HHHHHHHHHHHh
Confidence            5789999998 7999988877778898 555555777666655    3444332 22    222211 122222221  1


Q ss_pred             CCCccEEEEccCCh-------------------------HhHHHHHHHhhcCC-cEEEEEcCCCCCceee
Q 017336          256 NGGVDRSVECTGNI-------------------------DNMISAFECVHDGW-GVAVLVGVPSKDAVFM  299 (373)
Q Consensus       256 ~~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~~-g~~v~~g~~~~~~~~~  299 (373)
                      -|++|+.++..|-.                         .....++..|+..+ |+|+.+++..+...++
T Consensus        89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P  158 (282)
T KOG1205|consen   89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP  158 (282)
T ss_pred             cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC
Confidence            24899999987732                         13446677777754 8999998876543333

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.73  E-value=0.011  Score=51.03  Aligned_cols=101  Identities=17%  Similarity=0.199  Sum_probs=67.4

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHH----hcCCce---eecCCCCCccHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAK----KFGVTD---FVNTSEHDRPIQEVI  251 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~----~lg~~~---vi~~~~~~~~~~~~~  251 (373)
                      +.+...++++++||=+|+|. |..++.+++..+ ..+|++++.+++..+.++    +.+...   ++..+..+     .+
T Consensus        64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~-----~~  137 (205)
T PRK13944         64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKR-----GL  137 (205)
T ss_pred             HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCccc-----CC
Confidence            34556788899999999865 777777777664 238999999988666554    345421   22211111     01


Q ss_pred             HHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEE
Q 017336          252 AEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       252 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      .  ..+.||+|+-+.......+...+.|+++ |+++..
T Consensus       138 ~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~  172 (205)
T PRK13944        138 E--KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP  172 (205)
T ss_pred             c--cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence            0  1237999998766656677888999997 998764

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.72  E-value=0.0088  Score=55.73  Aligned_cols=79  Identities=23%  Similarity=0.413  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCcee---ecCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~v---i~~~~~~--~~~~~~~~~~~~~  257 (373)
                      .++++||+|+ |++|.++++.+...|+ +|+.+++++++++.+    ++.|.+..   .|..+.+  ..+.+.+.+. .+
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g   83 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF-GG   83 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh-cC
Confidence            4689999998 8999999999999999 799998988776543    34555432   2332221  0122222222 24


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus        84 ~iD~lVnnAG~   94 (330)
T PRK06139         84 RIDVWVNNVGV   94 (330)
T ss_pred             CCCEEEECCCc
Confidence            79999999873

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.72  E-value=0.011  Score=51.67  Aligned_cols=77  Identities=9%  Similarity=0.181  Sum_probs=51.5

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee--ecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF--VNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v--i~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      ++++|+|+ |.+|...+..+...|+ +|+++++++++.+.+++++-..+  .|..+. ..+.+.+.....+++|++|.+.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~~~~~id~vi~~a   79 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDP-ASLDQLLQRLQGQRFDLLFVNA   79 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCH-HHHHHHHHHhhcCCCCEEEEcC
Confidence            57899987 8999998888888899 89999988777666655432222  232221 1133333333334799999987


Q ss_pred             CC
Q 017336          267 GN  268 (373)
Q Consensus       267 g~  268 (373)
                      |.
T Consensus        80 g~   81 (225)
T PRK08177         80 GI   81 (225)
T ss_pred             cc
Confidence            64

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.69  E-value=0.012  Score=56.41  Aligned_cols=76  Identities=11%  Similarity=0.180  Sum_probs=54.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      -.+++|||+|+|.+|.+++..+...|+..++++.++.++.+.+ .+++...++.       + +.+.+... .+|+||+|
T Consensus       179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~-------~-~~l~~~l~-~aDiVI~a  249 (414)
T PRK13940        179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY-------L-SELPQLIK-KADIIIAA  249 (414)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec-------H-HHHHHHhc-cCCEEEEC
Confidence            4578999999999999999999999988899999997775554 4455212222       2 22323222 58999999


Q ss_pred             cCChHh
Q 017336          266 TGNIDN  271 (373)
Q Consensus       266 ~g~~~~  271 (373)
                      ++.+..
T Consensus       250 T~a~~~  255 (414)
T PRK13940        250 VNVLEY  255 (414)
T ss_pred             cCCCCe
Confidence            998654

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.68  E-value=0.025  Score=55.15  Aligned_cols=79  Identities=24%  Similarity=0.376  Sum_probs=50.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh--hHH-HHHHhcCCcee-ecCCCCCccHHHHHHHHc--CCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRF-EEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~--~~~-~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~--~~~~d  260 (373)
                      +++++||+|+ |++|...++.+...|+ +|+++++++  ++. +..++++...+ .|..+.+ ...+.+....  .+++|
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~g~id  286 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITAPD-APARIAEHLAERHGGLD  286 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHH-HHHHHHHHHHHhCCCCC
Confidence            5789999987 9999999999999999 788887643  222 23344555332 3433322 1222222221  23699


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      ++|++.|.
T Consensus       287 ~vi~~AG~  294 (450)
T PRK08261        287 IVVHNAGI  294 (450)
T ss_pred             EEEECCCc
Confidence            99999883

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.67  E-value=0.071  Score=45.95  Aligned_cols=116  Identities=18%  Similarity=0.145  Sum_probs=67.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChh-HHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~-~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      .+++|||+|+|.+|..-++.+...|+ .|++++.... ..+.+.+.|--..+. .+...   ..   +  .++|+||-++
T Consensus         8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~-~~~~~---~d---l--~~~~lVi~at   77 (205)
T TIGR01470         8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA-RCFDA---DI---L--EGAFLVIAAT   77 (205)
T ss_pred             CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe-CCCCH---HH---h--CCcEEEEECC
Confidence            46799999999999999999999999 7888866432 223333333111121 11110   01   1  2689999999


Q ss_pred             CChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEE
Q 017336          267 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT  314 (373)
Q Consensus       267 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~  314 (373)
                      +.++.-.......+.. |..+...+......+.++...-...+++--+
T Consensus        78 ~d~~ln~~i~~~a~~~-~ilvn~~d~~e~~~f~~pa~~~~g~l~iais  124 (205)
T TIGR01470        78 DDEELNRRVAHAARAR-GVPVNVVDDPELCSFIFPSIVDRSPVVVAIS  124 (205)
T ss_pred             CCHHHHHHHHHHHHHc-CCEEEECCCcccCeEEEeeEEEcCCEEEEEE
Confidence            9865545555555554 7777655433333344333222244555433

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK00536 speE spermidine synthase; Provisional

Probab=96.66  E-value=0.0072  Score=53.89  Aligned_cols=101  Identities=10%  Similarity=-0.038  Sum_probs=66.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEE-Ec
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV-EC  265 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vi-d~  265 (373)
                      ...++|||+|+|. |.++-.++|.-.  +|+.++.+++=.+.++++-....-..+++.-.+...+.+...+.||+|| |+
T Consensus        71 ~~pk~VLIiGGGD-Gg~~REvLkh~~--~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvDs  147 (262)
T PRK00536         71 KELKEVLIVDGFD-LELAHQLFKYDT--HVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICLQ  147 (262)
T ss_pred             CCCCeEEEEcCCc-hHHHHHHHCcCC--eeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEcC
Confidence            4459999998876 556678888753  8999999999888888832110001111111122223333334799955 55


Q ss_pred             cCChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          266 TGNIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       266 ~g~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      .-.+++...+.++|+++ |.++.-+.
T Consensus       148 ~~~~~fy~~~~~~L~~~-Gi~v~Qs~  172 (262)
T PRK00536        148 EPDIHKIDGLKRMLKED-GVFISVAK  172 (262)
T ss_pred             CCChHHHHHHHHhcCCC-cEEEECCC
Confidence            66778899999999997 99887643

>PRK08628 short chain dehydrogenase; Provisional

Probab=96.66  E-value=0.028  Score=50.10  Aligned_cols=79  Identities=22%  Similarity=0.246  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh---cCCce-e--ecCCCCCccHHHHHHHHc--CCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD-F--VNTSEHDRPIQEVIAEMT--NGG  258 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~---lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~  258 (373)
                      +++++||+|+ |.+|...++.+...|+ +|+++++++++.+..++   .+... .  .|..+.. .+.+.+.+..  .++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~   83 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDA-QCRDAVEQTVAKFGR   83 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHHhcCC
Confidence            4679999997 8999999988888999 78888887776544433   33321 1  2222211 1222222221  137


Q ss_pred             ccEEEEccCC
Q 017336          259 VDRSVECTGN  268 (373)
Q Consensus       259 ~d~vid~~g~  268 (373)
                      +|++|.+.|.
T Consensus        84 id~vi~~ag~   93 (258)
T PRK08628         84 IDGLVNNAGV   93 (258)
T ss_pred             CCEEEECCcc
Confidence            9999999883

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.66  E-value=0.017  Score=48.08  Aligned_cols=96  Identities=20%  Similarity=0.209  Sum_probs=61.5

Q ss_pred             hcccchhhhhhhhhhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCcc
Q 017336          168 ILSCGVSTGLGATLNVAKPERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP  246 (373)
Q Consensus       168 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~-~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~  246 (373)
                      ..|+...++...+.+...--.+++|||+|+|. +|..++..++..|+ +|+++.++.+.                     
T Consensus        23 ~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~~---------------------   80 (168)
T cd01080          23 FIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTKN---------------------   80 (168)
T ss_pred             ccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCchh---------------------
Confidence            34444344443333333345789999999985 69999999999999 78888765211                     


Q ss_pred             HHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          247 IQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       247 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +.+.+.     .+|+||.+++.+..+..  +.++++ -.++.++...
T Consensus        81 l~~~l~-----~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~pr  119 (168)
T cd01080          81 LKEHTK-----QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGINR  119 (168)
T ss_pred             HHHHHh-----hCCEEEEcCCCCceecH--HHccCC-eEEEEccCCC
Confidence            222121     48999999999664333  356664 6666666543

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.65  E-value=0.06  Score=46.29  Aligned_cols=115  Identities=11%  Similarity=-0.017  Sum_probs=63.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh-hHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~-~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      .+++|||+|+|.+|...+..+...|+ .|++++... +....+.+-+.- ........        ...-.++|+||-++
T Consensus         9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~i-~~~~~~~~--------~~~l~~adlViaaT   78 (202)
T PRK06718          9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGKI-RWKQKEFE--------PSDIVDAFLVIAAT   78 (202)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCCE-EEEecCCC--------hhhcCCceEEEEcC
Confidence            46899999999999999988888998 788886542 122222222211 11111111        00002689999999


Q ss_pred             CChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEE
Q 017336          267 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT  314 (373)
Q Consensus       267 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~  314 (373)
                      +.+ .++..+...+.. +.++...+......+.++...-...+++--+
T Consensus        79 ~d~-elN~~i~~~a~~-~~lvn~~d~~~~~~f~~Pa~~~~g~l~iaIs  124 (202)
T PRK06718         79 NDP-RVNEQVKEDLPE-NALFNVITDAESGNVVFPSALHRGKLTISVS  124 (202)
T ss_pred             CCH-HHHHHHHHHHHh-CCcEEECCCCccCeEEEeeEEEcCCeEEEEE
Confidence            984 455555555553 6666555443333343333222244555433

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=96.61  E-value=0.022  Score=48.31  Aligned_cols=96  Identities=17%  Similarity=0.181  Sum_probs=61.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcCCCccE
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDR  261 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~  261 (373)
                      ++++++||-+|+|. |..++.+++.....+|++++.+++..+.+++    .+.+.+ .....+  ..+ +..  .+.+|+
T Consensus        43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~~d--~~~-~~~--~~~fDl  115 (187)
T PRK00107         43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVHGR--AEE-FGQ--EEKFDV  115 (187)
T ss_pred             cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEecc--Hhh-CCC--CCCccE
Confidence            44588999998864 5556666665433389999999887766643    454332 111111  111 111  237999


Q ss_pred             EEEccCC--hHhHHHHHHHhhcCCcEEEEE
Q 017336          262 SVECTGN--IDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       262 vid~~g~--~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      |+.....  +..+..+.+.|+++ |+++.+
T Consensus       116 V~~~~~~~~~~~l~~~~~~LkpG-G~lv~~  144 (187)
T PRK00107        116 VTSRAVASLSDLVELCLPLLKPG-GRFLAL  144 (187)
T ss_pred             EEEccccCHHHHHHHHHHhcCCC-eEEEEE
Confidence            9974322  36778899999997 999877

>PRK08265 short chain dehydrogenase; Provisional

Probab=96.58  E-value=0.036  Score=49.66  Aligned_cols=79  Identities=25%  Similarity=0.310  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCce-e--ecCCCCCccHHHHHHHHc--CCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~~d  260 (373)
                      .++++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+ ++++... +  .|..+.+ .+.+.+.+..  -+.+|
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~id   82 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITDDA-AIERAVATVVARFGRVD   82 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHH-HHHHHHHHHHHHhCCCC
Confidence            4689999987 8999999999999999 899998887755444 4444321 1  2332221 1222222221  13689


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      +++++.|.
T Consensus        83 ~lv~~ag~   90 (261)
T PRK08265         83 ILVNLACT   90 (261)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK06953 short chain dehydrogenase; Provisional

Probab=96.56  E-value=0.018  Score=50.24  Aligned_cols=77  Identities=16%  Similarity=0.320  Sum_probs=52.8

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      +++||+|+ |.+|...++.+...|+ +|+.++++.++.+.++..+...+ .|..+.+ .+.+.+.+...+++|+++.+.|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~~d~vi~~ag   79 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVADPA-SVAGLAWKLDGEALDAAVYVAG   79 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCCHH-HHHHHHHHhcCCCCCEEEECCC
Confidence            47899987 8999999988888899 79999898887777776665422 3333321 2333233333337999999877


Q ss_pred             C
Q 017336          268 N  268 (373)
Q Consensus       268 ~  268 (373)
                      .
T Consensus        80 ~   80 (222)
T PRK06953         80 V   80 (222)
T ss_pred             c
Confidence            5

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.55  E-value=0.02  Score=49.80  Aligned_cols=103  Identities=20%  Similarity=0.263  Sum_probs=66.9

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHH----hcCCceeecCCCCCccHHHHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEM  254 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~----~lg~~~vi~~~~~~~~~~~~~~~~  254 (373)
                      +.+...++++++||-+|+|. |..++.+++..+. .+|++++.+++..+.++    ++|.+.+..... +  ..+..  .
T Consensus        69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~-d--~~~~~--~  142 (215)
T TIGR00080        69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG-D--GTQGW--E  142 (215)
T ss_pred             HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC-C--cccCC--c
Confidence            34556788999999998865 6666777776653 26999999988776654    345533211111 1  10000  0


Q ss_pred             cCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEE
Q 017336          255 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       255 ~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      ..+.||+|+-....+.......+.|+++ |+++..
T Consensus       143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~  176 (215)
T TIGR00080       143 PLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP  176 (215)
T ss_pred             ccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence            1137999887655556777888999997 998764

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.54  E-value=0.017  Score=51.50  Aligned_cols=79  Identities=20%  Similarity=0.292  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCcee-ecCCCCCccHHHHHHHHc--CCCccEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRS  262 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~v-i~~~~~~~~~~~~~~~~~--~~~~d~v  262 (373)
                      ++++|||+|+ |.+|..+++.+...|+ +|+++++++.+.+.. ++++...+ .|..+.+ .+.+.+.+..  .+++|++
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~v   83 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTDED-AVNALFDTAAETYGSVDIA   83 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence            4789999998 8999999999999999 898888887765544 44544322 2333221 1222222221  1368999


Q ss_pred             EEccCC
Q 017336          263 VECTGN  268 (373)
Q Consensus       263 id~~g~  268 (373)
                      |.+.|.
T Consensus        84 i~~ag~   89 (255)
T PRK06057         84 FNNAGI   89 (255)
T ss_pred             EECCCc
Confidence            998874

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.51  E-value=0.043  Score=48.54  Aligned_cols=101  Identities=19%  Similarity=0.233  Sum_probs=59.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh-HHHH----HHhcCCce-e--ecCCCCCccHHHHHHHHcC--
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RFEE----AKKFGVTD-F--VNTSEHDRPIQEVIAEMTN--  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~-~~~~----~~~lg~~~-v--i~~~~~~~~~~~~~~~~~~--  256 (373)
                      +++++||+|+ |.+|...+..+...|+ +|+++.++.+ +.+.    ++..+... .  .|..+.+ .+.+.+.+...  
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~   82 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEE-SVAALMDTAREEF   82 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHhC
Confidence            4678999997 8999999998888998 7888777542 3222    22233321 1  2332211 12222332221  


Q ss_pred             CCccEEEEccCCh-------------------HhHHHHHHHhhcCCcEEEEEcC
Q 017336          257 GGVDRSVECTGNI-------------------DNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       257 ~~~d~vid~~g~~-------------------~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      +++|+++.+.|..                   ..++.+.+.+..+ ++++.++.
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS  135 (248)
T PRK07806         83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS  135 (248)
T ss_pred             CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence            3689999887642                   2334455555554 78888865

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.51  E-value=0.012  Score=53.52  Aligned_cols=75  Identities=13%  Similarity=0.064  Sum_probs=51.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCce-eecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~-vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      .++++||+|+|+++.+++..+..+|+.+|+++.|+.+|.+.+.+ ++... +....     ..+.+.... ..+|+||+|
T Consensus       124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~-----~~~~~~~~~-~~~DiVIna  197 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE-----GDSGGLAIE-KAAEVLVST  197 (282)
T ss_pred             CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc-----chhhhhhcc-cCCCEEEEC
Confidence            57899999999999999999999999899999999887766543 43211 11111     101111111 268999999


Q ss_pred             cCC
Q 017336          266 TGN  268 (373)
Q Consensus       266 ~g~  268 (373)
                      ++.
T Consensus       198 Tp~  200 (282)
T TIGR01809       198 VPA  200 (282)
T ss_pred             CCC
Confidence            875

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK12939 short chain dehydrogenase; Provisional

Probab=96.49  E-value=0.041  Score=48.64  Aligned_cols=79  Identities=24%  Similarity=0.254  Sum_probs=50.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~  257 (373)
                      +++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+    ++.+... +  .|..+.+ .+.+.+.+..  -+
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~   83 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPA-SVQRFFDAAAAALG   83 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence            4689999997 8999999999999999 788888877655433    2233322 2  2332211 1222222211  13


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|.+.|.
T Consensus        84 ~id~vi~~ag~   94 (250)
T PRK12939         84 GLDGLVNNAGI   94 (250)
T ss_pred             CCCEEEECCCC
Confidence            79999999875

>PRK07109 short chain dehydrogenase; Provisional

Probab=96.47  E-value=0.039  Score=51.51  Aligned_cols=79  Identities=19%  Similarity=0.265  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCcee---ecCCCCCccHHHHHHHHc--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHDRPIQEVIAEMT--NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~v---i~~~~~~~~~~~~~~~~~--~~  257 (373)
                      .+++|||+|+ |++|..+++.+...|+ +|+.+++++++.+.+    ++.|....   .|..+.. .+.+.+.+..  -+
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~-~v~~~~~~~~~~~g   84 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAE-AVQAAADRAEEELG   84 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHH-HHHHHHHHHHHHCC
Confidence            4678999998 8999999999999999 788888888765543    33454332   2332221 1222222221  13


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus        85 ~iD~lInnAg~   95 (334)
T PRK07109         85 PIDTWVNNAMV   95 (334)
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.47  E-value=0.061  Score=44.25  Aligned_cols=88  Identities=15%  Similarity=0.109  Sum_probs=54.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .+++|||+|+|.+|.--++.+...|+ .|++++  ++..+.+++++.-.. ......        +..-.++|+||-+++
T Consensus        12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~-~~~~~~--------~~dl~~a~lViaaT~   79 (157)
T PRK06719         12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITW-KQKTFS--------NDDIKDAHLIYAATN   79 (157)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEE-EecccC--------hhcCCCceEEEECCC
Confidence            56899999999999999988888999 788874  333333444542111 111111        111126899999998


Q ss_pred             ChHhHHHHHHHhhcCCcEEEEE
Q 017336          268 NIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       268 ~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      . +..+..+...+.. +..+..
T Consensus        80 d-~e~N~~i~~~a~~-~~~vn~   99 (157)
T PRK06719         80 Q-HAVNMMVKQAAHD-FQWVNV   99 (157)
T ss_pred             C-HHHHHHHHHHHHH-CCcEEE
Confidence            8 5566666656554 434443

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.46  E-value=0.019  Score=51.24  Aligned_cols=79  Identities=23%  Similarity=0.355  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc-ee--ecCCCCCccHHHHHHHHc--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DF--VNTSEHDRPIQEVIAEMT--NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~-~v--i~~~~~~~~~~~~~~~~~--~~  257 (373)
                      .++++||+|+ |.+|..++..+...|+ +|+++.++.++.+.+.+    .+.. .+  .|..+. ..+.+.+.+..  .+
T Consensus         8 ~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   85 (258)
T PRK06949          8 EGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDY-QSIKAAVAHAETEAG   85 (258)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHhcC
Confidence            4689999987 9999999999999999 89999888877654432    1221 12  232221 12333332221  23


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus        86 ~~d~li~~ag~   96 (258)
T PRK06949         86 TIDILVNNSGV   96 (258)
T ss_pred             CCCEEEECCCC
Confidence            78999999883

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.46  E-value=0.0092  Score=53.85  Aligned_cols=45  Identities=36%  Similarity=0.425  Sum_probs=40.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  231 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~  231 (373)
                      .+++++||+|+|+.+.+++.-++..|+.+++++.|+.+|.+.+.+
T Consensus       124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~  168 (283)
T COG0169         124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD  168 (283)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            357999999999999999999999998899999999988777655

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.45  E-value=0.031  Score=48.13  Aligned_cols=35  Identities=34%  Similarity=0.358  Sum_probs=31.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      .+.+|+|+|+|++|..+++.+...|..++..++.+
T Consensus        20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            35789999999999999999999999899999876

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK08267 short chain dehydrogenase; Provisional

Probab=96.44  E-value=0.065  Score=47.83  Aligned_cols=77  Identities=18%  Similarity=0.220  Sum_probs=51.3

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cC-Cc-e--eecCCCCCccHHHHHHHH---cCCCcc
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FG-VT-D--FVNTSEHDRPIQEVIAEM---TNGGVD  260 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg-~~-~--vi~~~~~~~~~~~~~~~~---~~~~~d  260 (373)
                      +++||+|+ |.+|...++.+...|+ +|++++++.++.+.+.+ ++ .. .  ..|..+.+ .+.+.+...   ..+++|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRA-AWDAALADFAAATGGRLD   79 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHcCCCCC
Confidence            57999987 8999999998888998 89999888877665543 32 11 1  23333321 133333332   134799


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      +++.+.|.
T Consensus        80 ~vi~~ag~   87 (260)
T PRK08267         80 VLFNNAGI   87 (260)
T ss_pred             EEEECCCC
Confidence            99999875

>PRK04148 hypothetical protein; Provisional

Probab=96.40  E-value=0.019  Score=45.45  Aligned_cols=86  Identities=20%  Similarity=0.230  Sum_probs=63.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC-CCCCccHHHHHHHHcCCCccEEEEc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT-SEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~-~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      .++.+++++|.| .|...+..+...|. .|++++.+++..+.+++.+.+.+.+- -+.+.++        -+++|+|+.+
T Consensus        15 ~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~--------y~~a~liysi   84 (134)
T PRK04148         15 GKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEI--------YKNAKLIYSI   84 (134)
T ss_pred             ccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHH--------HhcCCEEEEe
Confidence            356789999999 88755666667898 99999999999999999888665432 1222111        1279999999


Q ss_pred             cCChHhHHHHHHHhhcC
Q 017336          266 TGNIDNMISAFECVHDG  282 (373)
Q Consensus       266 ~g~~~~~~~~~~~l~~~  282 (373)
                      -..++.....++.-+.-
T Consensus        85 rpp~el~~~~~~la~~~  101 (134)
T PRK04148         85 RPPRDLQPFILELAKKI  101 (134)
T ss_pred             CCCHHHHHHHHHHHHHc
Confidence            88878777777766664

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=96.40  E-value=0.059  Score=46.63  Aligned_cols=108  Identities=20%  Similarity=0.223  Sum_probs=75.5

Q ss_pred             hccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh----cCCceee-cCCCCCccHHHHHHHHc
Q 017336          182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFV-NTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~----lg~~~vi-~~~~~~~~~~~~~~~~~  255 (373)
                      .+++..+.++||=+|.+ +|+.++.+|..+. -.++++++.++++.+.+++    .|.+..+ -....+  ..+.+.+..
T Consensus        53 ~L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gd--al~~l~~~~  129 (219)
T COG4122          53 LLARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGD--ALDVLSRLL  129 (219)
T ss_pred             HHHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCc--HHHHHHhcc
Confidence            34566688899888864 3777778887775 3389999999999888765    5765522 122122  666666644


Q ss_pred             CCCccEEEEccC---ChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          256 NGGVDRSVECTG---NIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       256 ~~~~d~vid~~g---~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      .+.||.||-=..   .+++++.+++.|+++ |.++.-+...
T Consensus       130 ~~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DNvl~  169 (219)
T COG4122         130 DGSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADNVLF  169 (219)
T ss_pred             CCCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEeeccc
Confidence            458999876444   457899999999997 8888765544

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.40  E-value=0.017  Score=54.63  Aligned_cols=84  Identities=23%  Similarity=0.226  Sum_probs=60.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHH-HHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~-~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      .++++||+|+|-+|..++..+...|...|+++.|+.+|.. +++++|+..+ ..        +.+..... .+|+||.++
T Consensus       177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l--------~el~~~l~-~~DvVissT  246 (414)
T COG0373         177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-AL--------EELLEALA-EADVVISST  246 (414)
T ss_pred             ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cH--------HHHHHhhh-hCCEEEEec
Confidence            6789999999999999999999999889999999987755 5577885432 11        22222222 589999999


Q ss_pred             CChHh---HHHHHHHhhc
Q 017336          267 GNIDN---MISAFECVHD  281 (373)
Q Consensus       267 g~~~~---~~~~~~~l~~  281 (373)
                      +.+..   -......++.
T Consensus       247 sa~~~ii~~~~ve~a~~~  264 (414)
T COG0373         247 SAPHPIITREMVERALKI  264 (414)
T ss_pred             CCCccccCHHHHHHHHhc
Confidence            98643   2244455555

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.40  E-value=0.025  Score=55.73  Aligned_cols=73  Identities=25%  Similarity=0.222  Sum_probs=54.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      +.++++|+|+|.|..|++++++++..|+ +|++.+..+++.+.++++|+..+. ...    ..+.+     ..+|+|+.+
T Consensus         9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~~-~~~----~~~~l-----~~~D~VV~S   77 (488)
T PRK03369          9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATVS-TSD----AVQQI-----ADYALVVTS   77 (488)
T ss_pred             ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEEc-Ccc----hHhHh-----hcCCEEEEC
Confidence            4578899999999999999999999999 899999877666667777874332 111    11111     147999999


Q ss_pred             cCCh
Q 017336          266 TGNI  269 (373)
Q Consensus       266 ~g~~  269 (373)
                      .|-+
T Consensus        78 pGi~   81 (488)
T PRK03369         78 PGFR   81 (488)
T ss_pred             CCCC
Confidence            8865

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.37  E-value=0.021  Score=51.17  Aligned_cols=78  Identities=24%  Similarity=0.300  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc-CCce-e--ecCCCCCccHHHHHHHHcC--CCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTD-F--VNTSEHDRPIQEVIAEMTN--GGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l-g~~~-v--i~~~~~~~~~~~~~~~~~~--~~~d  260 (373)
                      ++++++|+|+ |++|..+++.+...|+ +|++++++.++.+.+.+. +... .  .|..+.+ ...+.+++...  +++|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~id   81 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLD-DHKEAVARCVAAFGKID   81 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHH-HHHHHHHHHHHHhCCCC
Confidence            4689999987 8999999999989999 899998888776666543 3221 1  2222211 12222332221  3789


Q ss_pred             EEEEccC
Q 017336          261 RSVECTG  267 (373)
Q Consensus       261 ~vid~~g  267 (373)
                      ++|++.|
T Consensus        82 ~li~~Ag   88 (262)
T TIGR03325        82 CLIPNAG   88 (262)
T ss_pred             EEEECCC
Confidence            9999986

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.35  E-value=0.03  Score=50.49  Aligned_cols=95  Identities=21%  Similarity=0.262  Sum_probs=64.6

Q ss_pred             hcccchhhhhhhhhhccC-CCCCCEEEEECCC-HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCc
Q 017336          168 ILSCGVSTGLGATLNVAK-PERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR  245 (373)
Q Consensus       168 ~~~~~~~ta~~~l~~~~~-~~~~~~vlI~G~g-~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~  245 (373)
                      ..||+....+.. .+..+ --.|++|+|+|.| .+|.-+++++...|+ +|+++.+...                   + 
T Consensus       137 ~~PcTp~ai~~l-l~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t~-------------------~-  194 (286)
T PRK14175        137 FVPCTPLGIMEI-LKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRSK-------------------D-  194 (286)
T ss_pred             CCCCcHHHHHHH-HHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCch-------------------h-
Confidence            345544444443 33333 2478999999996 599999999999999 8888854311                   0 


Q ss_pred             cHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       246 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                       +.    +.+. .+|+||.++|.+.++..  +.++++ ..++.+|...
T Consensus       195 -l~----~~~~-~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~~  233 (286)
T PRK14175        195 -MA----SYLK-DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNTP  233 (286)
T ss_pred             -HH----HHHh-hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCCc
Confidence             21    2222 58999999999766655  468886 8888887753

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.34  E-value=0.057  Score=46.39  Aligned_cols=82  Identities=28%  Similarity=0.288  Sum_probs=56.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      -.+++|+|+|.|.+|..+++.+...|+ +|++++++.++.+.+.+ +++.. ++..+           +.....|+++-|
T Consensus        26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~~-v~~~~-----------l~~~~~Dv~vp~   92 (200)
T cd01075          26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGATV-VAPEE-----------IYSVDADVFAPC   92 (200)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCEE-Ecchh-----------hccccCCEEEec
Confidence            367899999999999999999999999 89999998887666644 46532 22211           111157888866


Q ss_pred             cCChHhHHHHHHHhhc
Q 017336          266 TGNIDNMISAFECVHD  281 (373)
Q Consensus       266 ~g~~~~~~~~~~~l~~  281 (373)
                      ......-...++.|+.
T Consensus        93 A~~~~I~~~~~~~l~~  108 (200)
T cd01075          93 ALGGVINDDTIPQLKA  108 (200)
T ss_pred             ccccccCHHHHHHcCC
Confidence            5543444555566654

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.34  E-value=0.04  Score=50.14  Aligned_cols=43  Identities=23%  Similarity=0.245  Sum_probs=37.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  230 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~  230 (373)
                      .+++|+|+|+|++|.+++..+...|+.+|++++++.+|.+.+.
T Consensus       126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la  168 (284)
T PRK12549        126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALA  168 (284)
T ss_pred             cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence            5689999999999999999999999988999999988766553

>PLN02366 spermidine synthase

Probab=96.33  E-value=0.044  Score=50.30  Aligned_cols=100  Identities=20%  Similarity=0.126  Sum_probs=65.2

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC--------ceeecCCCCCccHHHHHHHHcCC
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--------TDFVNTSEHDRPIQEVIAEMTNG  257 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~--------~~vi~~~~~~~~~~~~~~~~~~~  257 (373)
                      ....++||++|+|. |.++..+++.-+..+|.+++.+++-.+.++++-.        +++- ....+  ..+.+++..++
T Consensus        89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~-vi~~D--a~~~l~~~~~~  164 (308)
T PLN02366         89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVN-LHIGD--GVEFLKNAPEG  164 (308)
T ss_pred             CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceE-EEECh--HHHHHhhccCC
Confidence            34578999999876 5566777877666689999999887787777311        1110 00011  33334443344


Q ss_pred             CccEEEEccCC----------hHhHHHHHHHhhcCCcEEEEEc
Q 017336          258 GVDRSVECTGN----------IDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       258 ~~d~vid~~g~----------~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      .+|+||.-...          .++++.+.++|+++ |.++..+
T Consensus       165 ~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~  206 (308)
T PLN02366        165 TYDAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA  206 (308)
T ss_pred             CCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence            79998764322          25688999999997 9987643

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.32  E-value=0.04  Score=41.81  Aligned_cols=91  Identities=22%  Similarity=0.238  Sum_probs=58.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .+++|||+|+|.+|..-++.+...|+ +|++++...   +..+  +.-.... ..    +.    +.. .++|+||-+.+
T Consensus         6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~~-~~----~~----~~l-~~~~lV~~at~   69 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLIR-RE----FE----EDL-DGADLVFAATD   69 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEEE-SS-----G----GGC-TTESEEEE-SS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHHh-hh----HH----HHH-hhheEEEecCC
Confidence            57899999999999999999999999 899987765   2222  1111111 11    20    011 27999999999


Q ss_pred             ChHhHHHHHHHhhcCCcEEEEEcCCCCC
Q 017336          268 NIDNMISAFECVHDGWGVAVLVGVPSKD  295 (373)
Q Consensus       268 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~  295 (373)
                      .+..-....+..+.. +..+...+....
T Consensus        70 d~~~n~~i~~~a~~~-~i~vn~~D~p~~   96 (103)
T PF13241_consen   70 DPELNEAIYADARAR-GILVNVVDDPEL   96 (103)
T ss_dssp             -HHHHHHHHHHHHHT-TSEEEETT-CCC
T ss_pred             CHHHHHHHHHHHhhC-CEEEEECCCcCC
Confidence            866655666666654 888887665433

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.32  E-value=0.023  Score=50.96  Aligned_cols=79  Identities=19%  Similarity=0.257  Sum_probs=50.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMT--NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~-v--i~~~~~~~~~~~~~~~~~--~~  257 (373)
                      +++++||+|+ |.+|...++.+...|+ +|++++++.++.+.+.+    .+... +  .|..+.+ .+.+.+.+..  -+
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   86 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPE-ATAGLAGQAVEAFG   86 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence            5789999987 8999999999988999 89999888776554322    23221 2  2332221 1222222221  13


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus        87 ~id~vi~~Ag~   97 (263)
T PRK07814         87 RLDIVVNNVGG   97 (263)
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.31  E-value=0.056  Score=47.39  Aligned_cols=91  Identities=21%  Similarity=0.197  Sum_probs=61.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCc--EEEEEcCC----hhH--------HHHHHhcCCceeecCCCCCccHHHHHH
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGAS--RIIGVDRS----SKR--------FEEAKKFGVTDFVNTSEHDRPIQEVIA  252 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~--~V~~~~~~----~~~--------~~~~~~lg~~~vi~~~~~~~~~~~~~~  252 (373)
                      -.+++|+|+|+|..|.+++..+...|+.  +++.++++    .++        .++++.++... .   ..  ++.+.+ 
T Consensus        23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~~--~l~~~l-   95 (226)
T cd05311          23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---GG--TLKEAL-   95 (226)
T ss_pred             ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---cC--CHHHHH-
Confidence            3568999999999999999999999997  89999988    343        33445543211 1   01  133333 


Q ss_pred             HHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEE
Q 017336          253 EMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       253 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                          .++|++|++++...+....++.|.++ ..++.+
T Consensus        96 ----~~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~l  127 (226)
T cd05311          96 ----KGADVFIGVSRPGVVKKEMIKKMAKD-PIVFAL  127 (226)
T ss_pred             ----hcCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEe
Confidence                24899999997433345677778774 555443

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.30  E-value=0.026  Score=51.63  Aligned_cols=79  Identities=23%  Similarity=0.323  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCC--cee---ecCCCCCccHHHHHHHHc--CCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV--TDF---VNTSEHDRPIQEVIAEMT--NGG  258 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~--~~v---i~~~~~~~~~~~~~~~~~--~~~  258 (373)
                      .++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+ ++++.  ...   .|..+.+ .+.+.+.+..  -++
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~   85 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTDLA-AMQAAAEEAVERFGG   85 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHH-HHHHHHHHHHHHcCC
Confidence            4789999987 8999999999999999 899998988776554 44542  111   2332211 1222222221  137


Q ss_pred             ccEEEEccCC
Q 017336          259 VDRSVECTGN  268 (373)
Q Consensus       259 ~d~vid~~g~  268 (373)
                      +|++|++.|.
T Consensus        86 id~vI~nAG~   95 (296)
T PRK05872         86 IDVVVANAGI   95 (296)
T ss_pred             CCEEEECCCc
Confidence            9999999884

>PLN02780 ketoreductase/ oxidoreductase

Probab=96.30  E-value=0.03  Score=51.99  Aligned_cols=80  Identities=20%  Similarity=0.205  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-----cC-Cce---eecCCCCCccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FG-VTD---FVNTSEHDRPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-----lg-~~~---vi~~~~~~~~~~~~~~~~~~~  257 (373)
                      .|+++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+.+     .+ ...   ..|..+...+..+.+.+..++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~  130 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG  130 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence            4789999998 8999998888888899 79999999887665422     22 111   234432212234445554444


Q ss_pred             -CccEEEEccCC
Q 017336          258 -GVDRSVECTGN  268 (373)
Q Consensus       258 -~~d~vid~~g~  268 (373)
                       .+|++++++|.
T Consensus       131 ~didilVnnAG~  142 (320)
T PLN02780        131 LDVGVLINNVGV  142 (320)
T ss_pred             CCccEEEEecCc
Confidence             57799998763

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.29  E-value=0.026  Score=50.52  Aligned_cols=79  Identities=22%  Similarity=0.289  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCce-e--ecCCCCCccHHHHHHHHc--CCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-F--VNTSEHDRPIQEVIAEMT--NGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~~d  260 (373)
                      +++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+.+ ++... .  .|..+.. .+.+.+.+..  -+++|
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~id   82 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYA-DNQRAVDQTVDAFGKLD   82 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHH-HHHHHHHHHHHhcCCCC
Confidence            4689999987 8999999999999999 79999898877666543 33211 1  2222211 1222233221  13799


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      ++|++.|.
T Consensus        83 ~li~~ag~   90 (263)
T PRK06200         83 CFVGNAGI   90 (263)
T ss_pred             EEEECCCC
Confidence            99999873

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=96.26  E-value=0.024  Score=55.57  Aligned_cols=79  Identities=27%  Similarity=0.356  Sum_probs=55.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh---------------------hHHHHHHhcCCceeecCCCCCc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRFEEAKKFGVTDFVNTSEHDR  245 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~---------------------~~~~~~~~lg~~~vi~~~~~~~  245 (373)
                      ..+++|+|+|+|+.|+.++..++..|+ .|++++..+                     ...+.++++|++..++..-.. 
T Consensus       139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~-  216 (467)
T TIGR01318       139 PTGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGR-  216 (467)
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCC-
Confidence            367899999999999999999999999 788887653                     345677889987655432211 


Q ss_pred             cHHHHHHHHcCCCccEEEEccCChH
Q 017336          246 PIQEVIAEMTNGGVDRSVECTGNID  270 (373)
Q Consensus       246 ~~~~~~~~~~~~~~d~vid~~g~~~  270 (373)
                      ++  .+.... .++|.||.++|...
T Consensus       217 ~~--~~~~~~-~~~D~vilAtGa~~  238 (467)
T TIGR01318       217 DI--SLDDLL-EDYDAVFLGVGTYR  238 (467)
T ss_pred             cc--CHHHHH-hcCCEEEEEeCCCC
Confidence            00  111221 26999999999753

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.23  E-value=0.022  Score=50.88  Aligned_cols=79  Identities=27%  Similarity=0.293  Sum_probs=51.8

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCc--ee--ecCCCCCccHHHHH---HHHcCC
Q 017336          187 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT--DF--VNTSEHDRPIQEVI---AEMTNG  257 (373)
Q Consensus       187 ~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~--~v--i~~~~~~~~~~~~~---~~~~~~  257 (373)
                      -+++++||+|+ |.+|..++..+...|+ +|++++++++..+.+.+ ..-.  .+  .|..+.. .+.+.+   .+.. +
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~-~   85 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPA-QVERVFDTAVERF-G   85 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHH-HHHHHHHHHHHHh-C
Confidence            46789999998 8999999999999999 79999888766655443 2211  12  2322211 122222   2222 3


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|+||.+.|.
T Consensus        86 ~~d~vi~~ag~   96 (264)
T PRK12829         86 GLDVLVNNAGI   96 (264)
T ss_pred             CCCEEEECCCC
Confidence            79999998875

>PRK00811 spermidine synthase; Provisional

Probab=96.23  E-value=0.035  Score=50.49  Aligned_cols=97  Identities=16%  Similarity=0.151  Sum_probs=64.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC------C---ceeecCCCCCccHHHHHHHHcCC
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG------V---TDFVNTSEHDRPIQEVIAEMTNG  257 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg------~---~~vi~~~~~~~~~~~~~~~~~~~  257 (373)
                      ...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-      .   ..+- ....+  ..+.+.. ..+
T Consensus        75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~-v~~~D--a~~~l~~-~~~  149 (283)
T PRK00811         75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVE-LVIGD--GIKFVAE-TEN  149 (283)
T ss_pred             CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceE-EEECc--hHHHHhh-CCC
Confidence            3567999999876 666777777767669999999999888887631      1   1110 00111  3333433 344


Q ss_pred             CccEEEEccCC----------hHhHHHHHHHhhcCCcEEEEE
Q 017336          258 GVDRSVECTGN----------IDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       258 ~~d~vid~~g~----------~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      .+|+||.-...          .+++..+.+.|+++ |.++..
T Consensus       150 ~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~  190 (283)
T PRK00811        150 SFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQ  190 (283)
T ss_pred             cccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence            89998864321          35677889999997 998875

>PRK06180 short chain dehydrogenase; Provisional

Probab=96.22  E-value=0.029  Score=50.72  Aligned_cols=79  Identities=24%  Similarity=0.350  Sum_probs=52.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce--e--ecCCCCCccHHHHHHHHcC--CCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--F--VNTSEHDRPIQEVIAEMTN--GGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~--v--i~~~~~~~~~~~~~~~~~~--~~~d  260 (373)
                      .++++||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+.+.....  .  .|..+.+ .+.+.+.+...  +++|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~-~~~~~~~~~~~~~~~~d   80 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFD-AIDAVVADAEATFGPID   80 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHH-HHHHHHHHHHHHhCCCC
Confidence            3578999987 8999999999888999 8999999888776665532221  1  2332221 12222222211  3689


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      +++++.|.
T Consensus        81 ~vv~~ag~   88 (277)
T PRK06180         81 VLVNNAGY   88 (277)
T ss_pred             EEEECCCc
Confidence            99999875

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.20  E-value=0.031  Score=50.39  Aligned_cols=70  Identities=23%  Similarity=0.138  Sum_probs=50.6

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCCCccEEE
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV  263 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vi  263 (373)
                      ....+++++|+|+|+.+.+++..+...|+.+|+++.|+.++.+.+.+ ++..           +...+   ....+|+||
T Consensus       118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~-----------~~~~~---~~~~~dlvI  183 (272)
T PRK12550        118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE-----------WRPDL---GGIEADILV  183 (272)
T ss_pred             CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc-----------chhhc---ccccCCEEE
Confidence            34456799999999999999999999999889999999887766643 4321           10011   112589999


Q ss_pred             EccCC
Q 017336          264 ECTGN  268 (373)
Q Consensus       264 d~~g~  268 (373)
                      +|+.-
T Consensus       184 NaTp~  188 (272)
T PRK12550        184 NVTPI  188 (272)
T ss_pred             ECCcc
Confidence            99753

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.15  E-value=0.036  Score=49.93  Aligned_cols=78  Identities=24%  Similarity=0.340  Sum_probs=51.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcC-Cce-eecCCCCCccHHHHHHHHcC--CCccEE
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG-VTD-FVNTSEHDRPIQEVIAEMTN--GGVDRS  262 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg-~~~-vi~~~~~~~~~~~~~~~~~~--~~~d~v  262 (373)
                      ++++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++ +.. ..|..+.+ .+.+.+.+...  +++|++
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~l   82 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTDPA-SFAAFLDAVEADLGPIDVL   82 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence            578999998 8999999998888899 788888888776554 3344 222 22333321 12222222211  379999


Q ss_pred             EEccCC
Q 017336          263 VECTGN  268 (373)
Q Consensus       263 id~~g~  268 (373)
                      |++.|.
T Consensus        83 i~~ag~   88 (273)
T PRK07825         83 VNNAGV   88 (273)
T ss_pred             EECCCc
Confidence            999873

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.15  E-value=0.052  Score=51.78  Aligned_cols=90  Identities=27%  Similarity=0.364  Sum_probs=58.6

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCc-EEEEEcCChhHHHHHHh--cCC--ce-eecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          192 VAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKK--FGV--TD-FVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       192 vlI~G~g~~G~~ai~la~~~g~~-~V~~~~~~~~~~~~~~~--lg~--~~-vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      |+|+|+|.+|..+++.+.+.+-. +|++.+++.++.+.+.+  .+.  .. .+|..+    . +.+.++.. +.|+||+|
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~----~-~~l~~~~~-~~dvVin~   74 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND----P-ESLAELLR-GCDVVINC   74 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT----H-HHHHHHHT-TSSEEEE-
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC----H-HHHHHHHh-cCCEEEEC
Confidence            78999999999999999877643 89999999999777654  222  22 233322    2 23555544 46999999


Q ss_pred             cCChHhHHHHHHHhhcCCcEEEE
Q 017336          266 TGNIDNMISAFECVHDGWGVAVL  288 (373)
Q Consensus       266 ~g~~~~~~~~~~~l~~~~g~~v~  288 (373)
                      +|.......+..|+..+ -.++.
T Consensus        75 ~gp~~~~~v~~~~i~~g-~~yvD   96 (386)
T PF03435_consen   75 AGPFFGEPVARACIEAG-VHYVD   96 (386)
T ss_dssp             SSGGGHHHHHHHHHHHT--EEEE
T ss_pred             CccchhHHHHHHHHHhC-CCeec
Confidence            98755556667777775 66665

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.14  E-value=0.031  Score=49.73  Aligned_cols=78  Identities=22%  Similarity=0.288  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce---eecCCCCCccHHHHHH---HHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD---FVNTSEHDRPIQEVIA---EMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~---vi~~~~~~~~~~~~~~---~~~~  256 (373)
                      .++++||+|+ |++|.+++..+...|+ +|+.++++.++.+.+.+    .+...   ..|..+.+ .+.+.+.   +.. 
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~-   84 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQ-QVTSMLDQVTAEL-   84 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHh-
Confidence            4789999997 8999999999999999 89999888776554432    23221   12332221 1222222   222 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|+++++.|.
T Consensus        85 g~id~lv~~ag~   96 (253)
T PRK05867         85 GGIDIAVCNAGI   96 (253)
T ss_pred             CCCCEEEECCCC
Confidence            379999998773

>PRK09291 short chain dehydrogenase; Provisional

Probab=96.14  E-value=0.038  Score=49.18  Aligned_cols=73  Identities=14%  Similarity=0.153  Sum_probs=49.5

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-e--ecCCCCCccHHHHHHHHcCCCcc
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMTNGGVD  260 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~-v--i~~~~~~~~~~~~~~~~~~~~~d  260 (373)
                      ++++||+|+ |.+|..+++.+...|+ +|+++.+++++.+.+.+    .+... +  .|..+.     +.+.....+++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~~~~~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA-----IDRAQAAEWDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH-----HHHHHHhcCCCC
Confidence            468999998 8999999999999999 88888887766554432    23221 1  232221     223333334899


Q ss_pred             EEEEccC
Q 017336          261 RSVECTG  267 (373)
Q Consensus       261 ~vid~~g  267 (373)
                      ++|++.|
T Consensus        76 ~vi~~ag   82 (257)
T PRK09291         76 VLLNNAG   82 (257)
T ss_pred             EEEECCC
Confidence            9999987

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.13  E-value=0.03  Score=49.83  Aligned_cols=78  Identities=26%  Similarity=0.278  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce--e--ecCCCCCccHHH---HHHHHcCCCc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--F--VNTSEHDRPIQE---VIAEMTNGGV  259 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~--v--i~~~~~~~~~~~---~~~~~~~~~~  259 (373)
                      +++++||+|+ |.+|...++.+...|+ +|+.++++.+..+...++....  .  .|..+.. .+.+   .+.+.. +++
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~-~~~   90 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQ-SVEAAVAAVISAF-GRI   90 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHH-HHHHHHHHHHHHh-CCC
Confidence            4689999997 8999999999888999 7999988877655555543221  1  2322211 1222   222222 378


Q ss_pred             cEEEEccCC
Q 017336          260 DRSVECTGN  268 (373)
Q Consensus       260 d~vid~~g~  268 (373)
                      |++|.+.|.
T Consensus        91 d~vi~~ag~   99 (255)
T PRK06841         91 DILVNSAGV   99 (255)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=96.13  E-value=0.029  Score=57.25  Aligned_cols=76  Identities=28%  Similarity=0.340  Sum_probs=56.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChh---------------------HHHHHHhcCCceeecCCCC-Cc
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSEH-DR  245 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~---------------------~~~~~~~lg~~~vi~~~~~-~~  245 (373)
                      .+++|+|+|+|..|+.++..+++.|+ +|+++++.+.                     +.+.++++|++..++..-. +.
T Consensus       309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  387 (639)
T PRK12809        309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI  387 (639)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence            48999999999999999999999999 7888876652                     5667788898766554321 11


Q ss_pred             cHHHHHHHHcCCCccEEEEccCCh
Q 017336          246 PIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       246 ~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      .+    .++. .++|.||.++|..
T Consensus       388 ~~----~~l~-~~~DaV~latGa~  406 (639)
T PRK12809        388 TF----SDLT-SEYDAVFIGVGTY  406 (639)
T ss_pred             CH----HHHH-hcCCEEEEeCCCC
Confidence            12    1221 2699999999974

>PRK07774 short chain dehydrogenase; Provisional

Probab=96.11  E-value=0.037  Score=49.03  Aligned_cols=78  Identities=26%  Similarity=0.301  Sum_probs=49.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-h---cCCce---eecCCCCCccHHH---HHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K---FGVTD---FVNTSEHDRPIQE---VIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~---lg~~~---vi~~~~~~~~~~~---~~~~~~~  256 (373)
                      .++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. +   .+...   ..|..+.. .+.+   .+.+.. 
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~-   81 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPD-SAKAMADATVSAF-   81 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHh-
Confidence            4678999998 9999999998888998 8999988876543332 2   22211   12322211 1222   222222 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|.+.|.
T Consensus        82 ~~id~vi~~ag~   93 (250)
T PRK07774         82 GGIDYLVNNAAI   93 (250)
T ss_pred             CCCCEEEECCCC
Confidence            369999999883

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.11  E-value=0.042  Score=49.14  Aligned_cols=81  Identities=25%  Similarity=0.342  Sum_probs=51.7

Q ss_pred             CCCCCEEEEECC-C-HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-----cCCcee----ecCCCCCccHHHHHHHH
Q 017336          186 PERGSSVAVFGL-G-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTDF----VNTSEHDRPIQEVIAEM  254 (373)
Q Consensus       186 ~~~~~~vlI~G~-g-~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-----lg~~~v----i~~~~~~~~~~~~~~~~  254 (373)
                      +..++++||+|+ | ++|.++++.+...|+ +|+++++++++.+...+     ++...+    .|..+.+ .+.+.+.+.
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~   91 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEA-QVDALIDAA   91 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHH-HHHHHHHHH
Confidence            345789999987 6 799999999999999 78888887766544322     443222    2322211 122222221


Q ss_pred             c--CCCccEEEEccCC
Q 017336          255 T--NGGVDRSVECTGN  268 (373)
Q Consensus       255 ~--~~~~d~vid~~g~  268 (373)
                      .  .+++|++|++.|.
T Consensus        92 ~~~~g~id~li~~ag~  107 (262)
T PRK07831         92 VERLGRLDVLVNNAGL  107 (262)
T ss_pred             HHHcCCCCEEEECCCC
Confidence            1  1479999999984

>PRK07402 precorrin-6B methylase; Provisional

Probab=96.09  E-value=0.11  Score=44.29  Aligned_cols=105  Identities=19%  Similarity=0.326  Sum_probs=62.2

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcC
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~  256 (373)
                      .....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++    ++...+.... .+  ..+.+.... 
T Consensus        33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~-~d--~~~~~~~~~-  107 (196)
T PRK07402         33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE-GS--APECLAQLA-  107 (196)
T ss_pred             HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE-Cc--hHHHHhhCC-
Confidence            4445677888888887754 4455566655432389999999988777654    5554321111 11  222222221 


Q ss_pred             CCccE-EEEccCC-hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          257 GGVDR-SVECTGN-IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       257 ~~~d~-vid~~g~-~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..+|. .++.... ...+..+.+.|+++ |+++....
T Consensus       108 ~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~  143 (196)
T PRK07402        108 PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS  143 (196)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence            22344 4443222 36788999999997 99887743

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.09  E-value=0.088  Score=46.75  Aligned_cols=79  Identities=25%  Similarity=0.314  Sum_probs=49.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIAEMT--NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~  257 (373)
                      .++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.    +.+... .  .|..+.+ .+.+.+.+..  .+
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~   80 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEE-AINAGIDYAVETFG   80 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHcC
Confidence            3579999987 8999999998888899 8999988877654432    223321 1  2322211 1222222221  13


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|.+.+.
T Consensus        81 ~~d~vi~~a~~   91 (258)
T PRK12429         81 GVDILVNNAGI   91 (258)
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>PRK08339 short chain dehydrogenase; Provisional

Probab=96.06  E-value=0.046  Score=49.08  Aligned_cols=79  Identities=19%  Similarity=0.311  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c----CCce-e--ecCCCCCccHHHHHHHHc-CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTD-F--VNTSEHDRPIQEVIAEMT-NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-l----g~~~-v--i~~~~~~~~~~~~~~~~~-~~  257 (373)
                      .++++||+|+ +++|.++++.+...|+ +|+.++++.++.+.+.+ +    +... .  .|..+.+ +..+.+.+.. -+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~i~~~~~~~~~~g   84 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKRE-DLERTVKELKNIG   84 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHH-HHHHHHHHHHhhC
Confidence            4789999987 8999999999999999 89999888776554432 2    3221 1  2332221 1222222221 24


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|+++++.|.
T Consensus        85 ~iD~lv~nag~   95 (263)
T PRK08339         85 EPDIFFFSTGG   95 (263)
T ss_pred             CCcEEEECCCC
Confidence            79999999874

>PRK07024 short chain dehydrogenase; Provisional

Probab=96.03  E-value=0.045  Score=48.82  Aligned_cols=78  Identities=17%  Similarity=0.162  Sum_probs=50.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCC----ce-eecCCCCCccHHHHHHHHcC--CCc
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGV----TD-FVNTSEHDRPIQEVIAEMTN--GGV  259 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~----~~-vi~~~~~~~~~~~~~~~~~~--~~~  259 (373)
                      ++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+ +..    .. ..|..+. ..+.+.+.+...  +.+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~i~~~~~~~~~~~g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDA-DALAAAAADFIAAHGLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCH-HHHHHHHHHHHHhCCCC
Confidence            468999987 8999999999888899 89999888877655433 321    11 1233221 123333333221  368


Q ss_pred             cEEEEccCC
Q 017336          260 DRSVECTGN  268 (373)
Q Consensus       260 d~vid~~g~  268 (373)
                      |+++++.|.
T Consensus        80 d~lv~~ag~   88 (257)
T PRK07024         80 DVVIANAGI   88 (257)
T ss_pred             CEEEECCCc
Confidence            999998773

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.02  E-value=0.16  Score=45.59  Aligned_cols=103  Identities=17%  Similarity=0.203  Sum_probs=59.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh-------------------hH----HHHHHhcCCce-eecCCCC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KR----FEEAKKFGVTD-FVNTSEH  243 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~-------------------~~----~~~~~~lg~~~-vi~~~~~  243 (373)
                      .+.+|+|+|+|++|..++..+-+.|..+++.++.+.                   .|    .+.+++++.+. +....+.
T Consensus        29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~  108 (268)
T PRK15116         29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF  108 (268)
T ss_pred             cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence            457899999999999999999999988898887652                   01    12223344322 2111111


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          244 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       244 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      -  ..+.+.++....+|+||||.+....-....+......-.++..|..
T Consensus       109 i--~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGa  155 (268)
T PRK15116        109 I--TPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGA  155 (268)
T ss_pred             c--ChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCc
Confidence            0  0122333443479999999987443333333333321445555543

>PRK07832 short chain dehydrogenase; Provisional

Probab=96.01  E-value=0.089  Score=47.40  Aligned_cols=76  Identities=22%  Similarity=0.305  Sum_probs=48.3

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce----eecCCCCCccHH---HHHHHHcCC
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD----FVNTSEHDRPIQ---EVIAEMTNG  257 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~----vi~~~~~~~~~~---~~~~~~~~~  257 (373)
                      ++++|+|+ |++|..+++.+...|+ +|+.+++++++.+.+    +..+...    ..|..+.. .+.   +.+.+.. +
T Consensus         1 k~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~-~   77 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYD-AVAAFAADIHAAH-G   77 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHH-HHHHHHHHHHHhc-C
Confidence            36899987 8999999999988999 788888877664433    2233321    13333221 122   2222222 3


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus        78 ~id~lv~~ag~   88 (272)
T PRK07832         78 SMDVVMNIAGI   88 (272)
T ss_pred             CCCEEEECCCC
Confidence            69999999874

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.01  E-value=0.083  Score=49.29  Aligned_cols=35  Identities=34%  Similarity=0.441  Sum_probs=31.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      ..+|+|+|+|++|..++..+-+.|..++..++.+.
T Consensus        24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            46899999999999999999999998899898763

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=96.01  E-value=0.024  Score=48.58  Aligned_cols=97  Identities=15%  Similarity=0.246  Sum_probs=61.5

Q ss_pred             ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCceeecCCCCCccHHHHHHHH-cCC
Q 017336          183 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEM-TNG  257 (373)
Q Consensus       183 ~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l----g~~~vi~~~~~~~~~~~~~~~~-~~~  257 (373)
                      .....++.+||-+|+|. |..++.+++. |+ +|++++.+++..+.+++.    +...+ .....+  +    .+. ..+
T Consensus        25 ~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d--~----~~~~~~~   94 (197)
T PRK11207         25 AVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAVVD--L----NNLTFDG   94 (197)
T ss_pred             hcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecC--h----hhCCcCC
Confidence            34455678999999876 6677777765 77 899999998877666542    32211 111011  1    111 123


Q ss_pred             CccEEEEccC----C----hHhHHHHHHHhhcCCcEEEEEc
Q 017336          258 GVDRSVECTG----N----IDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       258 ~~d~vid~~g----~----~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      .||+|+....    .    ...+..+.+.|+++ |.++++.
T Consensus        95 ~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~  134 (197)
T PRK11207         95 EYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA  134 (197)
T ss_pred             CcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence            7999997633    1    25677888999997 9865543

>PRK05866 short chain dehydrogenase; Provisional

Probab=95.99  E-value=0.053  Score=49.58  Aligned_cols=79  Identities=27%  Similarity=0.429  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-ee--cCCCCCccHHHHHHHHc--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHDRPIQEVIAEMT--NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~-vi--~~~~~~~~~~~~~~~~~--~~  257 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+    .+... ++  |..+.+ .+.+.+....  -+
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~-~v~~~~~~~~~~~g  116 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLD-AVDALVADVEKRIG  116 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence            3578999987 8999999998888899 89999998876554432    33322 22  222211 1222222211  23


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus       117 ~id~li~~AG~  127 (293)
T PRK05866        117 GVDILINNAGR  127 (293)
T ss_pred             CCCEEEECCCC
Confidence            78999999874

>PRK01581 speE spermidine synthase; Validated

Probab=95.99  E-value=0.13  Score=47.92  Aligned_cols=99  Identities=15%  Similarity=0.081  Sum_probs=64.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC-----------CceeecCCCCCccHHHHHHHH
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-----------VTDFVNTSEHDRPIQEVIAEM  254 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg-----------~~~vi~~~~~~~~~~~~~~~~  254 (373)
                      ....++|||+|+|. |.++..+++..+..+|++++.+++-.+.++++.           .+++-... .+  ..+.+.. 
T Consensus       148 h~~PkrVLIIGgGd-G~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi-~D--a~~fL~~-  222 (374)
T PRK01581        148 VIDPKRVLILGGGD-GLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHV-CD--AKEFLSS-  222 (374)
T ss_pred             CCCCCEEEEECCCH-HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEE-Cc--HHHHHHh-
Confidence            34457999999764 556677777666669999999999999988631           11110000 11  3344433 


Q ss_pred             cCCCccEEEEccCC-----------hHhHHHHHHHhhcCCcEEEEEc
Q 017336          255 TNGGVDRSVECTGN-----------IDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       255 ~~~~~d~vid~~g~-----------~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      ..+.||+||--...           .+++..+.+.|+++ |.++...
T Consensus       223 ~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs  268 (374)
T PRK01581        223 PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQS  268 (374)
T ss_pred             cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEec
Confidence            33479997765322           24778999999997 9987764

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=95.98  E-value=0.057  Score=49.75  Aligned_cols=92  Identities=26%  Similarity=0.410  Sum_probs=61.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      .+|.|+|+|.+|...++.++..|. ..|+++++++++.+.+++.|....+.   .+  ..+.+     ...|+||.|+..
T Consensus         7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~--~~~~~-----~~aDvViiavp~   76 (307)
T PRK07502          7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT---TS--AAEAV-----KGADLVILCVPV   76 (307)
T ss_pred             cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec---CC--HHHHh-----cCCCEEEECCCH
Confidence            679999999999999988888874 37999999999888888887532111   11  11111     258999999976


Q ss_pred             hHh---HHHHHHHhhcCCcEEEEEcCC
Q 017336          269 IDN---MISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       269 ~~~---~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ...   +......++++ ..++.+|..
T Consensus        77 ~~~~~v~~~l~~~l~~~-~iv~dvgs~  102 (307)
T PRK07502         77 GASGAVAAEIAPHLKPG-AIVTDVGSV  102 (307)
T ss_pred             HHHHHHHHHHHhhCCCC-CEEEeCccc
Confidence            322   23333455664 666665543

>PRK08263 short chain dehydrogenase; Provisional

Probab=95.97  E-value=0.11  Score=46.75  Aligned_cols=78  Identities=17%  Similarity=0.251  Sum_probs=49.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCce-e--ecCCCCCccHHHHHHHHc--CCCccE
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-F--VNTSEHDRPIQEVIAEMT--NGGVDR  261 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~~d~  261 (373)
                      +++|||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+.+ ++... .  .|..+.. .+.+.+....  -+++|+
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~d~   80 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRA-AVFAAVETAVEHFGRLDI   80 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHH-HHHHHHHHHHHHcCCCCE
Confidence            468999987 8999999988888898 79999888877665544 22211 1  2222211 1222222221  137899


Q ss_pred             EEEccCC
Q 017336          262 SVECTGN  268 (373)
Q Consensus       262 vid~~g~  268 (373)
                      +|.+.|.
T Consensus        81 vi~~ag~   87 (275)
T PRK08263         81 VVNNAGY   87 (275)
T ss_pred             EEECCCC
Confidence            9999874

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=95.96  E-value=0.32  Score=42.28  Aligned_cols=117  Identities=11%  Similarity=0.027  Sum_probs=64.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh-hHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~-~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      ++.+|||+|+|.++.-=+..+...|+ +|.+++..- +....+.+.|--..+. ......      .+  .++++||-++
T Consensus        24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~~-r~~~~~------dl--~g~~LViaAT   93 (223)
T PRK05562         24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLIK-GNYDKE------FI--KDKHLIVIAT   93 (223)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEEe-CCCChH------Hh--CCCcEEEECC
Confidence            56899999999999988888888999 788885432 2222222223222221 111100      11  3789999999


Q ss_pred             CChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEe
Q 017336          267 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTF  315 (373)
Q Consensus       267 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~  315 (373)
                      +.++.-.......+.. +.++...+......+.++...-...++|--+.
T Consensus        94 dD~~vN~~I~~~a~~~-~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST  141 (223)
T PRK05562         94 DDEKLNNKIRKHCDRL-YKLYIDCSDYKKGLCIIPYQRSTKNFVFALNT  141 (223)
T ss_pred             CCHHHHHHHHHHHHHc-CCeEEEcCCcccCeEEeeeEEecCCEEEEEEC
Confidence            9854444444444443 66666544333333333332112445554333

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=95.96  E-value=0.055  Score=47.88  Aligned_cols=79  Identities=25%  Similarity=0.342  Sum_probs=49.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh--HHHHHHhcCCce-e--ecCCCCCccHHHHHHHHc--CCCc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGV  259 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~--~~~~~~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~~  259 (373)
                      .++++||+|+ |.+|..++..+...|+ +|+.+++++.  ..+.+++++... +  .|..+.+ .+...+.+..  .+++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~   81 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIE-AIKALVDSAVEEFGHI   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHH-HHHHHHHHHHHHcCCC
Confidence            4789999998 8999999999988999 8888877652  233344455322 2  2322221 1222232221  1369


Q ss_pred             cEEEEccCC
Q 017336          260 DRSVECTGN  268 (373)
Q Consensus       260 d~vid~~g~  268 (373)
                      |+++++.|.
T Consensus        82 d~li~~ag~   90 (248)
T TIGR01832        82 DILVNNAGI   90 (248)
T ss_pred             CEEEECCCC
Confidence            999998874

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06128 oxidoreductase; Provisional

Probab=95.96  E-value=0.12  Score=47.36  Aligned_cols=103  Identities=17%  Similarity=0.152  Sum_probs=60.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh--H----HHHHHhcCCcee---ecCCCCCccHHHHHHHHc--
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--R----FEEAKKFGVTDF---VNTSEHDRPIQEVIAEMT--  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~--~----~~~~~~lg~~~v---i~~~~~~~~~~~~~~~~~--  255 (373)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+.++.+  +    .+.+++.+....   .|..+.+ .+.+.+.+..  
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~  131 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEA-FCRQLVERAVKE  131 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHH-HHHHHHHHHHHH
Confidence            4689999987 8999999999988999 7777655432  1    223334454322   2222211 1222222221  


Q ss_pred             CCCccEEEEccCCh--------------------------HhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          256 NGGVDRSVECTGNI--------------------------DNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       256 ~~~~d~vid~~g~~--------------------------~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      -+++|++|++.|..                          ...+.+.+.|..+ ++++.++...
T Consensus       132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~~sS~~  194 (300)
T PRK06128        132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG-ASIINTGSIQ  194 (300)
T ss_pred             hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC-CEEEEECCcc
Confidence            13799999988731                          0223344455665 8998887643

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=95.95  E-value=0.091  Score=46.06  Aligned_cols=106  Identities=23%  Similarity=0.270  Sum_probs=72.7

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM  254 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~  254 (373)
                      +....++.||++|+=.|.|. |.+++-||+..|. .+|+..+..++..+.+++    +|....+.....|  ..+..   
T Consensus        86 I~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~D--v~~~~---  159 (256)
T COG2519          86 IVARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGD--VREGI---  159 (256)
T ss_pred             HHHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEecc--ccccc---
Confidence            34568899999999887765 7778888887764 589999999988777754    4554322111111  21111   


Q ss_pred             cCCCccEEE-EccCChHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          255 TNGGVDRSV-ECTGNIDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       255 ~~~~~d~vi-d~~g~~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ....||+|| |.-.-.+.++.+.+.|+++ |.++.+...
T Consensus       160 ~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P~  197 (256)
T COG2519         160 DEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSPT  197 (256)
T ss_pred             cccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcCC
Confidence            112688755 5555558899999999997 999988654

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=95.95  E-value=0.059  Score=48.80  Aligned_cols=100  Identities=24%  Similarity=0.325  Sum_probs=62.8

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcCCCccE
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDR  261 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~  261 (373)
                      .+++++||=+|+|. |.++|.. ..+|+.+|++++.++...+.+++    -++...+.....     .......++.||+
T Consensus       160 ~~~g~~vlDvGcGS-GILaIAa-~kLGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~-----~~~~~~~~~~~Dv  232 (300)
T COG2264         160 LKKGKTVLDVGCGS-GILAIAA-AKLGAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGF-----LLLEVPENGPFDV  232 (300)
T ss_pred             hcCCCEEEEecCCh-hHHHHHH-HHcCCceEEEecCCHHHHHHHHHHHHHcCCchhhhcccc-----cchhhcccCcccE
Confidence            56889999898854 5555543 45688799999999877666654    233211101111     1112223348999


Q ss_pred             EEEccCCh---HhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          262 SVECTGNI---DNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       262 vid~~g~~---~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      |+-..=-.   .+.+...+.++|+ |++++-|...
T Consensus       233 IVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~  266 (300)
T COG2264         233 IVANILAEVLVELAPDIKRLLKPG-GRLILSGILE  266 (300)
T ss_pred             EEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehH
Confidence            88654221   3566888999997 9999988764

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=95.95  E-value=0.039  Score=49.59  Aligned_cols=99  Identities=20%  Similarity=0.107  Sum_probs=71.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      +..+|.|+|+|.+|.-++.+|.-+|+ .|...+.+.+|++.+..+-..++....+.    ...+.+... ++|++|.++=
T Consensus       167 ~~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st----~~~iee~v~-~aDlvIgaVL  240 (371)
T COG0686         167 LPAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYST----PSNIEEAVK-KADLVIGAVL  240 (371)
T ss_pred             CCccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcC----HHHHHHHhh-hccEEEEEEE
Confidence            45678889999999999999999999 89999999999999887544443222221    122333322 5899998643


Q ss_pred             Ch------HhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          268 NI------DNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       268 ~~------~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      -+      -..++.++.|+++ +.++.+..-.
T Consensus       241 IpgakaPkLvt~e~vk~MkpG-sVivDVAiDq  271 (371)
T COG0686         241 IPGAKAPKLVTREMVKQMKPG-SVIVDVAIDQ  271 (371)
T ss_pred             ecCCCCceehhHHHHHhcCCC-cEEEEEEEcC
Confidence            21      2466889999997 9998887654

>PRK09072 short chain dehydrogenase; Provisional

Probab=95.95  E-value=0.056  Score=48.37  Aligned_cols=78  Identities=24%  Similarity=0.400  Sum_probs=49.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c--CCc-eee--cCCCCC--ccHHHHHHHHcCCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F--GVT-DFV--NTSEHD--RPIQEVIAEMTNGG  258 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-l--g~~-~vi--~~~~~~--~~~~~~~~~~~~~~  258 (373)
                      +++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ +  +.. ..+  |..+..  ..+.+.+.+  .++
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~--~~~   80 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE--MGG   80 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh--cCC
Confidence            4678999987 8999999998888999 79999898876655532 2  211 112  222211  011122222  247


Q ss_pred             ccEEEEccCC
Q 017336          259 VDRSVECTGN  268 (373)
Q Consensus       259 ~d~vid~~g~  268 (373)
                      +|+++.+.|.
T Consensus        81 id~lv~~ag~   90 (263)
T PRK09072         81 INVLINNAGV   90 (263)
T ss_pred             CCEEEECCCC
Confidence            8999999875

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.95  E-value=0.046  Score=48.35  Aligned_cols=79  Identities=23%  Similarity=0.306  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcC--Cce-e--ecCCCCCccHHHHHHHH--cCCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFG--VTD-F--VNTSEHDRPIQEVIAEM--TNGG  258 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg--~~~-v--i~~~~~~~~~~~~~~~~--~~~~  258 (373)
                      .++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. .+.  ... .  .|..+.+ .+...+.+.  ..++
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~   81 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEA-DVEAAVAAALERFGS   81 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHhCC
Confidence            4578999998 8999999999888899 7999999887655442 222  211 1  2222211 122222221  1137


Q ss_pred             ccEEEEccCC
Q 017336          259 VDRSVECTGN  268 (373)
Q Consensus       259 ~d~vid~~g~  268 (373)
                      +|+||.+.|.
T Consensus        82 ~d~vi~~ag~   91 (251)
T PRK07231         82 VDILVNNAGT   91 (251)
T ss_pred             CCEEEECCCC
Confidence            8999998874

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.93  E-value=0.052  Score=48.36  Aligned_cols=79  Identities=22%  Similarity=0.281  Sum_probs=48.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHc--CCCccEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRS  262 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~-~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~--~~~~d~v  262 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+.+ +++..+.+++.+...+ .|..+.. .+.+.+.+..  .+++|++
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~id~l   83 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGNRD-QVKKSKEVVEKEFGRVDVL   83 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence            4689999987 8999999999988999 6766644 3444444544444322 2333221 1222233221  1379999


Q ss_pred             EEccCC
Q 017336          263 VECTGN  268 (373)
Q Consensus       263 id~~g~  268 (373)
                      |.+.|.
T Consensus        84 i~~ag~   89 (255)
T PRK06463         84 VNNAGI   89 (255)
T ss_pred             EECCCc
Confidence            998874

>PRK08703 short chain dehydrogenase; Provisional

Probab=95.92  E-value=0.033  Score=49.04  Aligned_cols=80  Identities=28%  Similarity=0.390  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCC-c--e-eecCCCC-C---ccHHHHHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGV-T--D-FVNTSEH-D---RPIQEVIAEM  254 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~-~--~-vi~~~~~-~---~~~~~~~~~~  254 (373)
                      ++++++|+|+ |.+|...++.+...|+ +|+++++++++.+.+.    +.+. .  . -.|..+. .   ..+.+.+...
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            4579999987 8999999999988999 7999999887655432    2221 1  1 1232211 1   1123334444


Q ss_pred             cCCCccEEEEccCC
Q 017336          255 TNGGVDRSVECTGN  268 (373)
Q Consensus       255 ~~~~~d~vid~~g~  268 (373)
                      ..+.+|++|.+.|.
T Consensus        84 ~~~~id~vi~~ag~   97 (239)
T PRK08703         84 TQGKLDGIVHCAGY   97 (239)
T ss_pred             hCCCCCEEEEeccc
Confidence            43478999999884

>PLN03075 nicotianamine synthase; Provisional

Probab=95.92  E-value=0.064  Score=48.64  Aligned_cols=98  Identities=13%  Similarity=0.104  Sum_probs=65.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHhcC-----CceeecCCCCCccHHHHHHHHcCCCccE
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFG-----VTDFVNTSEHDRPIQEVIAEMTNGGVDR  261 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~lg-----~~~vi~~~~~~~~~~~~~~~~~~~~~d~  261 (373)
                      ++++|+-+|+|+.++.++-+++... ..++++++.+++..+.+++.-     ...-+.+...+  ..+...  ..++||+
T Consensus       123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~D--a~~~~~--~l~~FDl  198 (296)
T PLN03075        123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTAD--VMDVTE--SLKEYDV  198 (296)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECc--hhhccc--ccCCcCE
Confidence            7799999999999998888886553 238999999999888887632     22222222222  111100  1247999


Q ss_pred             EEEcc-------CChHhHHHHHHHhhcCCcEEEEEc
Q 017336          262 SVECT-------GNIDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       262 vid~~-------g~~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      ||-.+       .....+....+.|+++ |.+++-.
T Consensus       199 VF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~  233 (296)
T PLN03075        199 VFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS  233 (296)
T ss_pred             EEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence            99875       2235688999999996 7776543

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.91  E-value=0.051  Score=48.09  Aligned_cols=78  Identities=21%  Similarity=0.361  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHcC--C
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMTN--G  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~~--~  257 (373)
                      +++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+    +..+... .  .|..+.+ .+.+.+.....  +
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   81 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEE-DVEATFAQIAEDFG   81 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHcC
Confidence            4789999997 9999999999999999 799998887665433    2334332 1  2222211 12222332221  3


Q ss_pred             CccEEEEccC
Q 017336          258 GVDRSVECTG  267 (373)
Q Consensus       258 ~~d~vid~~g  267 (373)
                      ++|++|++.|
T Consensus        82 ~id~vi~~ag   91 (253)
T PRK08217         82 QLNGLINNAG   91 (253)
T ss_pred             CCCEEEECCC
Confidence            6899999987

>PRK06483 dihydromonapterin reductase; Provisional

Probab=95.90  E-value=0.067  Score=47.00  Aligned_cols=78  Identities=18%  Similarity=0.243  Sum_probs=49.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH-HHHHHhcCCcee-ecCCCCCccHHHHHHHHcC--CCccEEE
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVDRSV  263 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~-~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~--~~~d~vi  263 (373)
                      ++++||+|+ |++|..+++.+...|+ +|+.+++++++ .+.+++.++..+ .|..+.+ ...+.+.+...  +++|+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~lv   79 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFSTNA-GIMAFIDELKQHTDGLRAII   79 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCCHH-HHHHHHHHHHhhCCCccEEE
Confidence            468999987 8999999999888999 88888876543 344445554322 2332211 12222322221  3699999


Q ss_pred             EccCC
Q 017336          264 ECTGN  268 (373)
Q Consensus       264 d~~g~  268 (373)
                      ++.|.
T Consensus        80 ~~ag~   84 (236)
T PRK06483         80 HNASD   84 (236)
T ss_pred             ECCcc
Confidence            98874

>PRK06500 short chain dehydrogenase; Provisional

Probab=95.89  E-value=0.054  Score=47.89  Aligned_cols=79  Identities=22%  Similarity=0.368  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCcee---ecCCCCC--ccHHHHHHHHcCCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF---VNTSEHD--RPIQEVIAEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~v---i~~~~~~--~~~~~~~~~~~~~~~d  260 (373)
                      +++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++++....   .|..+..  ..+.+.+.+.. +++|
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id   82 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAF-GRLD   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh-CCCC
Confidence            4679999997 8999999999999999 899998887665443 44554321   2222211  01222222222 3789


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      ++|++.|.
T Consensus        83 ~vi~~ag~   90 (249)
T PRK06500         83 AVFINAGV   90 (249)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK06196 oxidoreductase; Provisional

Probab=95.87  E-value=0.06  Score=49.77  Aligned_cols=79  Identities=19%  Similarity=0.289  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcC-Cce-eecCCCCCccHHHHHHHHcC--CCccE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG-VTD-FVNTSEHDRPIQEVIAEMTN--GGVDR  261 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg-~~~-vi~~~~~~~~~~~~~~~~~~--~~~d~  261 (373)
                      .+++|||+|+ |++|.+++..+...|+ +|++++++.++.+.+ +++. +.. ..|..+.+ .+.+.+.+...  +++|+
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~-~v~~~~~~~~~~~~~iD~  102 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADLE-SVRAFAERFLDSGRRIDI  102 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHH-HHHHHHHHHHhcCCCCCE
Confidence            4689999998 8999999998888999 788888887765543 2232 221 12322211 12222333222  37999


Q ss_pred             EEEccCC
Q 017336          262 SVECTGN  268 (373)
Q Consensus       262 vid~~g~  268 (373)
                      +|++.|.
T Consensus       103 li~nAg~  109 (315)
T PRK06196        103 LINNAGV  109 (315)
T ss_pred             EEECCCC
Confidence            9998873

>PRK08618 ornithine cyclodeaminase; Validated

Probab=95.86  E-value=0.1  Score=48.46  Aligned_cols=94  Identities=17%  Similarity=0.175  Sum_probs=64.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHH-HHcCCcEEEEEcCChhHHHHHHh-----cCCceeecCCCCCccHHHHHHHHcCCCcc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGA-RIAGASRIIGVDRSSKRFEEAKK-----FGVTDFVNTSEHDRPIQEVIAEMTNGGVD  260 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la-~~~g~~~V~~~~~~~~~~~~~~~-----lg~~~vi~~~~~~~~~~~~~~~~~~~~~d  260 (373)
                      +..++++|+|+|..|...+..+ ...++++|.+++++.++.+.+.+     ++.... .+++    +.+.+     ...|
T Consensus       125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~~~----~~~~~-----~~aD  194 (325)
T PRK08618        125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VVNS----ADEAI-----EEAD  194 (325)
T ss_pred             CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-EeCC----HHHHH-----hcCC
Confidence            4567899999999998766544 46688899999999887665432     344321 1221    22222     2589


Q ss_pred             EEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          261 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       261 ~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +|+.|+++.. .... .+++++ -.+..+|...
T Consensus       195 iVi~aT~s~~-p~i~-~~l~~G-~hV~~iGs~~  224 (325)
T PRK08618        195 IIVTVTNAKT-PVFS-EKLKKG-VHINAVGSFM  224 (325)
T ss_pred             EEEEccCCCC-cchH-HhcCCC-cEEEecCCCC
Confidence            9999998853 3344 899996 8888888754

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=95.86  E-value=0.069  Score=48.14  Aligned_cols=79  Identities=27%  Similarity=0.360  Sum_probs=58.4

Q ss_pred             CCCCEEEEECC-CHHHHH-HHHHHHHcCCcEEEEEcCChhHHHHHH-----hcCCc---eeecCCCCCccHHHHHHHHcC
Q 017336          187 ERGSSVAVFGL-GAVGLA-AAEGARIAGASRIIGVDRSSKRFEEAK-----KFGVT---DFVNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       187 ~~~~~vlI~G~-g~~G~~-ai~la~~~g~~~V~~~~~~~~~~~~~~-----~lg~~---~vi~~~~~~~~~~~~~~~~~~  256 (373)
                      +-|++.+|+|+ .++|.+ +-++|+ .|. +|+.++|+++|++..+     +.++.   .++|+..++. ..+.+++...
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~-~ye~i~~~l~  123 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE-VYEKLLEKLA  123 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch-hHHHHHHHhc
Confidence            34688999998 589976 667777 899 7999999999987764     34542   2567777664 4566666666


Q ss_pred             C-CccEEEEccCC
Q 017336          257 G-GVDRSVECTGN  268 (373)
Q Consensus       257 ~-~~d~vid~~g~  268 (373)
                      + .+-+.++++|-
T Consensus       124 ~~~VgILVNNvG~  136 (312)
T KOG1014|consen  124 GLDVGILVNNVGM  136 (312)
T ss_pred             CCceEEEEecccc
Confidence            6 77889999884

>PRK07062 short chain dehydrogenase; Provisional

Probab=95.86  E-value=0.047  Score=48.93  Aligned_cols=79  Identities=28%  Similarity=0.362  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-----c-CCce---eecCCCCCccHHHHHHHHc--
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----F-GVTD---FVNTSEHDRPIQEVIAEMT--  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-----l-g~~~---vi~~~~~~~~~~~~~~~~~--  255 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+     . +...   ..|..+.+ .+.+.+.+..  
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~   84 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEA-DVAAFAAAVEAR   84 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHH-HHHHHHHHHHHh
Confidence            4689999998 8999999999999999 79999898776554322     1 1111   12332221 1222222221  


Q ss_pred             CCCccEEEEccCC
Q 017336          256 NGGVDRSVECTGN  268 (373)
Q Consensus       256 ~~~~d~vid~~g~  268 (373)
                      -+++|++|++.|.
T Consensus        85 ~g~id~li~~Ag~   97 (265)
T PRK07062         85 FGGVDMLVNNAGQ   97 (265)
T ss_pred             cCCCCEEEECCCC
Confidence            1379999999874

>PRK07890 short chain dehydrogenase; Provisional

Probab=95.86  E-value=0.053  Score=48.25  Aligned_cols=79  Identities=25%  Similarity=0.352  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce---eecCCCCCccHHHHHHHHcC--C
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD---FVNTSEHDRPIQEVIAEMTN--G  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~---vi~~~~~~~~~~~~~~~~~~--~  257 (373)
                      +++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+    .+...   ..|..+.+ .+...+.+...  +
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g   81 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDED-QCANLVALALERFG   81 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHH-HHHHHHHHHHHHcC
Confidence            5689999987 8999999999999999 89999888766544432    23221   12322211 12222222211  3


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      .+|++|.+.|.
T Consensus        82 ~~d~vi~~ag~   92 (258)
T PRK07890         82 RVDALVNNAFR   92 (258)
T ss_pred             CccEEEECCcc
Confidence            68999998874

>PRK07478 short chain dehydrogenase; Provisional

Probab=95.85  E-value=0.055  Score=48.15  Aligned_cols=79  Identities=19%  Similarity=0.292  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-ee--cCCCCCccHHHHHHHHc--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT--NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-vi--~~~~~~~~~~~~~~~~~--~~  257 (373)
                      .++++||+|+ |++|...+..+...|+ +|+.+++++++.+.+    ++.+.+. .+  |..+.+ ...+.+.+..  -+
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   82 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEA-YAKALVALAVERFG   82 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHhcC
Confidence            4678999987 8999999999989999 799888887765543    2234322 12  222211 1222222221  13


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus        83 ~id~li~~ag~   93 (254)
T PRK07478         83 GLDIAFNNAGT   93 (254)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.85  E-value=0.075  Score=46.82  Aligned_cols=79  Identities=25%  Similarity=0.265  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-e--ecCCCCCccHHHHHHHHcC--C
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIAEMTN--G  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-v--i~~~~~~~~~~~~~~~~~~--~  257 (373)
                      ..+++||+|+ |.+|..++..+...|+ +|+++++++++.+.+.    +.+... +  .|..+.+ .+.+.+.....  +
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPE-AIAPGIAELLEQFG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence            4578999987 8999999999999999 8999999876654432    223221 1  2322211 12222332211  3


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      +.|+++.+.|.
T Consensus        83 ~id~lv~~ag~   93 (241)
T PRK07454         83 CPDVLINNAGM   93 (241)
T ss_pred             CCCEEEECCCc
Confidence            68999999874

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=95.85  E-value=0.068  Score=44.00  Aligned_cols=79  Identities=28%  Similarity=0.344  Sum_probs=48.0

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCC--hhHHHHH----HhcCCce-eecCCCCC-ccHHHHHHHHc--CCC
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS--SKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMT--NGG  258 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~--~~~~~~~----~~lg~~~-vi~~~~~~-~~~~~~~~~~~--~~~  258 (373)
                      |++||+|+ +++|...++.+...|..+|+.+.++  .++.+.+    ++.+... ++..+-.+ ..+.+.+.+..  .+.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            57899987 8999998888877777688888888  3433332    3345322 22222111 11222333322  237


Q ss_pred             ccEEEEccCC
Q 017336          259 VDRSVECTGN  268 (373)
Q Consensus       259 ~d~vid~~g~  268 (373)
                      +|++|.+.|.
T Consensus        81 ld~li~~ag~   90 (167)
T PF00106_consen   81 LDILINNAGI   90 (167)
T ss_dssp             ESEEEEECSC
T ss_pred             cccccccccc
Confidence            9999998885

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK07677 short chain dehydrogenase; Provisional

Probab=95.85  E-value=0.055  Score=48.08  Aligned_cols=78  Identities=22%  Similarity=0.313  Sum_probs=49.7

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-ee--cCCCCCccHHHHHHHHc--CCC
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHDRPIQEVIAEMT--NGG  258 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~-vi--~~~~~~~~~~~~~~~~~--~~~  258 (373)
                      ++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+    .+... .+  |..+. ..+.+.+.+..  -++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNP-EDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHhCC
Confidence            478999987 8999999999999999 89999888766554432    23221 22  22221 11222222221  136


Q ss_pred             ccEEEEccCC
Q 017336          259 VDRSVECTGN  268 (373)
Q Consensus       259 ~d~vid~~g~  268 (373)
                      +|++|++.|.
T Consensus        79 id~lI~~ag~   88 (252)
T PRK07677         79 IDALINNAAG   88 (252)
T ss_pred             ccEEEECCCC
Confidence            8999998873

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.85  E-value=0.18  Score=41.72  Aligned_cols=90  Identities=21%  Similarity=0.266  Sum_probs=59.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      .+|.++|.|.+|...++-+...|+ +|.+.++++++.+.+.+.|+... +  +    ..+.+.     ..|+||-|+...
T Consensus         2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-~--s----~~e~~~-----~~dvvi~~v~~~   68 (163)
T PF03446_consen    2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA-D--S----PAEAAE-----QADVVILCVPDD   68 (163)
T ss_dssp             BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE-S--S----HHHHHH-----HBSEEEE-SSSH
T ss_pred             CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh-h--h----hhhHhh-----cccceEeecccc
Confidence            368899999999999999889999 89999999999999888885432 1  1    222222     359999998886


Q ss_pred             HhHHHHHH------HhhcCCcEEEEEcCCC
Q 017336          270 DNMISAFE------CVHDGWGVAVLVGVPS  293 (373)
Q Consensus       270 ~~~~~~~~------~l~~~~g~~v~~g~~~  293 (373)
                      ......+.      .+.++ ..++.++..+
T Consensus        69 ~~v~~v~~~~~i~~~l~~g-~iiid~sT~~   97 (163)
T PF03446_consen   69 DAVEAVLFGENILAGLRPG-KIIIDMSTIS   97 (163)
T ss_dssp             HHHHHHHHCTTHGGGS-TT-EEEEE-SS--
T ss_pred             hhhhhhhhhhHHhhccccc-eEEEecCCcc
Confidence            65554443      34554 5666665543

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=95.84  E-value=0.07  Score=43.53  Aligned_cols=95  Identities=22%  Similarity=0.266  Sum_probs=58.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHH-HHhcCCce-eecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~-~~~lg~~~-vi~~~~~~~~~~~~~~~~~~~~~d~vid  264 (373)
                      ..+++++|+|+|.+|...++.+...|...|++++++.++.+. +++++... .....+    ..    +. -.++|+|+.
T Consensus        17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~----~~----~~-~~~~Dvvi~   87 (155)
T cd01065          17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD----LE----EL-LAEADLIIN   87 (155)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc----hh----hc-cccCCEEEe
Confidence            456889999999999999988888864489999988776654 44555421 011111    11    11 137899999


Q ss_pred             ccCChHh----HHHHHHHhhcCCcEEEEEcC
Q 017336          265 CTGNIDN----MISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       265 ~~g~~~~----~~~~~~~l~~~~g~~v~~g~  291 (373)
                      |++....    .......++++ ..++.++.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~  117 (155)
T cd01065          88 TTPVGMKPGDELPLPPSLLKPG-GVVYDVVY  117 (155)
T ss_pred             CcCCCCCCCCCCCCCHHHcCCC-CEEEEcCc
Confidence            9887432    11122345554 55555544

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.84  E-value=0.04  Score=56.38  Aligned_cols=77  Identities=23%  Similarity=0.291  Sum_probs=53.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChh---------------------HHHHHHhcCCceeecCCC-CC
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSE-HD  244 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~---------------------~~~~~~~lg~~~vi~~~~-~~  244 (373)
                      ..+++|+|+|+|+.|+.++..+.+.|+ +|+++++.+.                     ..+.++++|++...+..- .+
T Consensus       325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~  403 (654)
T PRK12769        325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD  403 (654)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence            357899999999999999999999999 7888876532                     355667788765433211 11


Q ss_pred             ccHHHHHHHHcCCCccEEEEccCCh
Q 017336          245 RPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       245 ~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      ..+    .... .++|.||.++|..
T Consensus       404 i~~----~~~~-~~~DavilAtGa~  423 (654)
T PRK12769        404 ISL----ESLL-EDYDAVFVGVGTY  423 (654)
T ss_pred             CCH----HHHH-hcCCEEEEeCCCC
Confidence            111    1111 2699999998863

>PRK06482 short chain dehydrogenase; Provisional

Probab=95.83  E-value=0.057  Score=48.72  Aligned_cols=77  Identities=17%  Similarity=0.257  Sum_probs=50.2

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc-CCce-e--ecCCCCCccHHHHHHHHc--CCCccEE
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTD-F--VNTSEHDRPIQEVIAEMT--NGGVDRS  262 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l-g~~~-v--i~~~~~~~~~~~~~~~~~--~~~~d~v  262 (373)
                      +++||+|+ |.+|...++.+...|+ +|+++.++.++.+.+++. +... +  .|..+.+ .+.+.+.+..  .+++|++
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~v   80 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDSA-AVRAVVDRAFAALGRIDVV   80 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence            67999987 9999999998888898 899998988776665442 2211 1  2222211 1223333221  1378999


Q ss_pred             EEccCC
Q 017336          263 VECTGN  268 (373)
Q Consensus       263 id~~g~  268 (373)
                      |.+.|.
T Consensus        81 i~~ag~   86 (276)
T PRK06482         81 VSNAGY   86 (276)
T ss_pred             EECCCC
Confidence            999874

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=95.83  E-value=0.079  Score=46.74  Aligned_cols=106  Identities=15%  Similarity=0.161  Sum_probs=68.0

Q ss_pred             hccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHc-
Q 017336          182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-  255 (373)
Q Consensus       182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~-  255 (373)
                      ...+..+.++||=+|.|. |..++.+++.++ ..+|++++.+++..+.+++    .|...-+.....+  ..+.+.++. 
T Consensus        62 ~l~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gd--a~~~L~~l~~  138 (234)
T PLN02781         62 MLVKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSD--ALSALDQLLN  138 (234)
T ss_pred             HHHHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcc--HHHHHHHHHh
Confidence            446667788999998743 555556666553 3489999999988777754    4553222222222  444444432 


Q ss_pred             ---CCCccEEEEccC---ChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          256 ---NGGVDRSVECTG---NIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       256 ---~~~~d~vid~~g---~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                         .+.||.||--..   -...++.+.+.|+++ |.++.-+.
T Consensus       139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~dn~  179 (234)
T PLN02781        139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFDNT  179 (234)
T ss_pred             CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEEcC
Confidence               237999886543   235678899999997 98876543

>PRK07574 formate dehydrogenase; Provisional

Probab=95.81  E-value=0.05  Score=51.50  Aligned_cols=90  Identities=17%  Similarity=0.194  Sum_probs=59.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .+++|.|+|.|.+|...++.++.+|. +|++.+++....+..+++++...   .+    +.    ++.. ..|+|+.+..
T Consensus       191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~~---~~----l~----ell~-~aDvV~l~lP  257 (385)
T PRK07574        191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTYH---VS----FD----SLVS-VCDVVTIHCP  257 (385)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCceec---CC----HH----HHhh-cCCEEEEcCC
Confidence            57899999999999999999999999 89999887644444445554311   11    22    2221 4688877766


Q ss_pred             ChHh----H-HHHHHHhhcCCcEEEEEcC
Q 017336          268 NIDN----M-ISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       268 ~~~~----~-~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..+.    + ...+..|+++ ..+|.++.
T Consensus       258 lt~~T~~li~~~~l~~mk~g-a~lIN~aR  285 (385)
T PRK07574        258 LHPETEHLFDADVLSRMKRG-SYLVNTAR  285 (385)
T ss_pred             CCHHHHHHhCHHHHhcCCCC-cEEEECCC
Confidence            3321    1 2556777775 66666654

>PRK06172 short chain dehydrogenase; Provisional

Probab=95.80  E-value=0.057  Score=47.99  Aligned_cols=78  Identities=22%  Similarity=0.302  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHH---HHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQE---VIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~---~~~~~~~  256 (373)
                      .++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+    ++.+... .  .|..+.+ .+.+   .+.+.. 
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~-   82 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDA-EVKALVEQTIAAY-   82 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHh-
Confidence            4689999998 8999999988888898 799998887664433    3334322 1  2222211 1222   222222 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|++.|.
T Consensus        83 g~id~li~~ag~   94 (253)
T PRK06172         83 GRLDYAFNNAGI   94 (253)
T ss_pred             CCCCEEEECCCC
Confidence            378999998874

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.80  E-value=0.06  Score=48.59  Aligned_cols=79  Identities=14%  Similarity=0.194  Sum_probs=48.7

Q ss_pred             CCCEEEEECCC---HHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCcee--ecCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF--VNTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~g---~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~v--i~~~~~~--~~~~~~~~~~~~  256 (373)
                      .++++||+|++   ++|.++++.+...|+ +|+.+.++++..+.+    +++|....  .|..+.+  ..+.+.+.+.. 
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~-   83 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW-   83 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh-
Confidence            46899999984   899999999989999 788887765332222    33453322  2322211  11222232222 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +.+|+++++.|.
T Consensus        84 g~iD~lVnnAG~   95 (271)
T PRK06505         84 GKLDFVVHAIGF   95 (271)
T ss_pred             CCCCEEEECCcc
Confidence            379999999873

>PRK08589 short chain dehydrogenase; Validated

Probab=95.79  E-value=0.056  Score=48.74  Aligned_cols=79  Identities=24%  Similarity=0.283  Sum_probs=48.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh---cCCce---eecCCCCC--ccHHHHHHHHcCCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD---FVNTSEHD--RPIQEVIAEMTNGG  258 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~---lg~~~---vi~~~~~~--~~~~~~~~~~~~~~  258 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|++++++++..+.+++   .+...   ..|..+..  ..+.+.+.+.. ++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~   82 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF-GR   82 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc-CC
Confidence            4689999988 8999999988888899 89888888433333333   23221   13332221  01222222222 37


Q ss_pred             ccEEEEccCC
Q 017336          259 VDRSVECTGN  268 (373)
Q Consensus       259 ~d~vid~~g~  268 (373)
                      +|++|++.|.
T Consensus        83 id~li~~Ag~   92 (272)
T PRK08589         83 VDVLFNNAGV   92 (272)
T ss_pred             cCEEEECCCC
Confidence            8999998874

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.79  E-value=0.027  Score=54.94  Aligned_cols=95  Identities=11%  Similarity=0.123  Sum_probs=62.3

Q ss_pred             hhccCCCCCCEEE----EECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-eecCCCCCccHHHHHHHH
Q 017336          181 LNVAKPERGSSVA----VFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEM  254 (373)
Q Consensus       181 ~~~~~~~~~~~vl----I~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~-vi~~~~~~~~~~~~~~~~  254 (373)
                      ..+.++++++.+|    |+|+ |++|.+++|+++..|+ .|+++.+.+.+....+..+... ++|.....  +.+.+...
T Consensus        26 ~~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~l~~~  102 (450)
T PRK08261         26 VPLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATGIT--DPADLKAL  102 (450)
T ss_pred             ccccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCCCC--CHHHHHHH
Confidence            3567778888888    8765 9999999999999999 8888866655443333344442 44443322  33333222


Q ss_pred             cCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          255 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       255 ~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      .              .++...++.|.++ |+++.++...
T Consensus       103 ~--------------~~~~~~l~~l~~~-griv~i~s~~  126 (450)
T PRK08261        103 Y--------------EFFHPVLRSLAPC-GRVVVLGRPP  126 (450)
T ss_pred             H--------------HHHHHHHHhccCC-CEEEEEcccc
Confidence            1              4556677778886 8888887654

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.78  E-value=0.086  Score=48.71  Aligned_cols=39  Identities=18%  Similarity=0.227  Sum_probs=33.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA  229 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~  229 (373)
                      ++|.|+|+|.+|...++.+...|+ .|+..+.+++..+.+
T Consensus         8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~   46 (321)
T PRK07066          8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAAL   46 (321)
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Confidence            689999999999999999889999 899999988765543

>PRK04457 spermidine synthase; Provisional

Probab=95.77  E-value=0.13  Score=46.13  Aligned_cols=97  Identities=19%  Similarity=0.151  Sum_probs=65.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc-CC----ceeecCCCCCccHHHHHHHHcCCCccE
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GV----TDFVNTSEHDRPIQEVIAEMTNGGVDR  261 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l-g~----~~vi~~~~~~~~~~~~~~~~~~~~~d~  261 (373)
                      .++++||++|+|+ |..+..+++.....++++++.+++-.+.+++. +.    +.+- ....+  ..+.+.+. .+.+|+
T Consensus        65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~-v~~~D--a~~~l~~~-~~~yD~  139 (262)
T PRK04457         65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFE-VIEAD--GAEYIAVH-RHSTDV  139 (262)
T ss_pred             CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceE-EEECC--HHHHHHhC-CCCCCE
Confidence            4567899999876 77788888877544899999999999988773 32    1111 11112  44444432 347999


Q ss_pred             EE-EccCC---------hHhHHHHHHHhhcCCcEEEEE
Q 017336          262 SV-ECTGN---------IDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       262 vi-d~~g~---------~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      |+ |...+         .++++.+.+.|+++ |+++.-
T Consensus       140 I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin  176 (262)
T PRK04457        140 ILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN  176 (262)
T ss_pred             EEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence            87 33211         47888999999997 998763

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=95.76  E-value=0.14  Score=44.98  Aligned_cols=106  Identities=20%  Similarity=0.274  Sum_probs=73.4

Q ss_pred             hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcCC
Q 017336          182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG  257 (373)
Q Consensus       182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~~  257 (373)
                      ......+|.+||=+|+|. |-.++.+++..|-..|++++.++..++.+++    .|... +.+-..+  . +.+ .+...
T Consensus        45 ~~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~d--A-e~L-Pf~D~  118 (238)
T COG2226          45 SLLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGD--A-ENL-PFPDN  118 (238)
T ss_pred             HhhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEec--h-hhC-CCCCC
Confidence            334556899999887765 8889999999986699999999998888765    23221 1111111  0 001 02222


Q ss_pred             CccEEEEccCCh------HhHHHHHHHhhcCCcEEEEEcCCCC
Q 017336          258 GVDRSVECTGNI------DNMISAFECVHDGWGVAVLVGVPSK  294 (373)
Q Consensus       258 ~~d~vid~~g~~------~~~~~~~~~l~~~~g~~v~~g~~~~  294 (373)
                      -||+|..+.|-.      ..+.++.+.|+|+ |+++.+.....
T Consensus       119 sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p  160 (238)
T COG2226         119 SFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKP  160 (238)
T ss_pred             ccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCC
Confidence            799998887743      5788999999997 99998877653

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.75  E-value=0.077  Score=47.31  Aligned_cols=78  Identities=26%  Similarity=0.292  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCcee-e--cCCCCCccHHHHHH---HHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF-V--NTSEHDRPIQEVIA---EMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~v-i--~~~~~~~~~~~~~~---~~~~  256 (373)
                      +++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+    ++.+.... +  |..+.+ .+.+.+.   +.. 
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~-   82 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNED-AVNAGIDKVAERF-   82 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHH-HHHHHHHHHHHHc-
Confidence            3689999998 9999999999999999 788888887554433    33444321 2  222211 1222222   222 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      ++.|++|.+.|.
T Consensus        83 ~~~d~vi~~ag~   94 (262)
T PRK13394         83 GSVDILVSNAGI   94 (262)
T ss_pred             CCCCEEEECCcc
Confidence            368999999874

>PRK08264 short chain dehydrogenase; Validated

Probab=95.75  E-value=0.056  Score=47.47  Aligned_cols=75  Identities=19%  Similarity=0.318  Sum_probs=48.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc--ee-ecCCCCCccHHHHHHHHcCCCccEEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--DF-VNTSEHDRPIQEVIAEMTNGGVDRSV  263 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~--~v-i~~~~~~~~~~~~~~~~~~~~~d~vi  263 (373)
                      .++++||+|+ |.+|..+++.+...|+++|+.++++.++.+.   .+..  .+ .|..+.+ .+.+.+.. . +.+|++|
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~-~~~~~~~~-~-~~id~vi   78 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPA-SVAAAAEA-A-SDVTILV   78 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHH-HHHHHHHh-c-CCCCEEE
Confidence            4678999987 9999999999999998678888888766543   2222  11 2222211 12222222 1 2589999


Q ss_pred             EccCC
Q 017336          264 ECTGN  268 (373)
Q Consensus       264 d~~g~  268 (373)
                      .+.|.
T Consensus        79 ~~ag~   83 (238)
T PRK08264         79 NNAGI   83 (238)
T ss_pred             ECCCc
Confidence            99876

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.75  E-value=0.079  Score=47.36  Aligned_cols=79  Identities=19%  Similarity=0.205  Sum_probs=47.9

Q ss_pred             CCCEEEEECCC---HHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCceee--cCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFV--NTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~g---~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~vi--~~~~~~--~~~~~~~~~~~~  256 (373)
                      .++++||+|++   ++|.++++.+...|+ +|+.++++++..+.+    ++++....+  |..+..  ..+.+.+.+.. 
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   86 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEW-   86 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHc-
Confidence            46899999863   899999988888999 788887775432222    333332222  222211  11222333322 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|+++++.|.
T Consensus        87 g~ld~lv~nAg~   98 (258)
T PRK07533         87 GRLDFLLHSIAF   98 (258)
T ss_pred             CCCCEEEEcCcc
Confidence            479999998863

>PRK05854 short chain dehydrogenase; Provisional

Probab=95.74  E-value=0.071  Score=49.25  Aligned_cols=40  Identities=30%  Similarity=0.339  Sum_probs=33.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE  228 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~  228 (373)
                      .+++++|+|+ +++|.+++..+...|+ +|+.+.++.++.+.
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~   53 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEA   53 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHH
Confidence            3689999998 8999999998888999 88888888766543

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=95.73  E-value=0.066  Score=47.66  Aligned_cols=79  Identities=29%  Similarity=0.431  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~  257 (373)
                      .++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+    ++.|... .  .|..+.. .+.+.+.+..  -+
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   86 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHD-AVRAAIDAFEAEIG   86 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHH-HHHHHHHHHHHhcC
Confidence            4689999987 8999999998888899 799998887655432    2233322 1  2332211 1222222221  13


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus        87 ~~d~li~~ag~   97 (255)
T PRK07523         87 PIDILVNNAGM   97 (255)
T ss_pred             CCCEEEECCCC
Confidence            78999999874

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.73  E-value=0.08  Score=46.50  Aligned_cols=78  Identities=22%  Similarity=0.286  Sum_probs=50.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCcee---ecCCCCCccHHHHHHHHc--CCC
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHDRPIQEVIAEMT--NGG  258 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~v---i~~~~~~~~~~~~~~~~~--~~~  258 (373)
                      +++|||+|+ |.+|...+..+...|. +|+++.+++++.+.+    ++.+....   .|..+.. .+.+.+.+..  -++
T Consensus         5 ~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~   82 (246)
T PRK05653          5 GKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEA-AVRALIEAAVEAFGA   82 (246)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHHHhCC
Confidence            578999998 8999999999888899 699998887764433    33443322   2332211 1323333221  136


Q ss_pred             ccEEEEccCC
Q 017336          259 VDRSVECTGN  268 (373)
Q Consensus       259 ~d~vid~~g~  268 (373)
                      +|+++.+.|.
T Consensus        83 id~vi~~ag~   92 (246)
T PRK05653         83 LDILVNNAGI   92 (246)
T ss_pred             CCEEEECCCc
Confidence            8999999864

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.72  E-value=0.12  Score=45.20  Aligned_cols=79  Identities=14%  Similarity=0.170  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCcee---ecCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~v---i~~~~~~--~~~~~~~~~~~~~  257 (373)
                      .++++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+    ++.+.+..   .|..+.+  ..+.+.+.+..++
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4689999998 7999998888888999 788888888765543    23344321   2222211  1122223232332


Q ss_pred             CccEEEEccC
Q 017336          258 GVDRSVECTG  267 (373)
Q Consensus       258 ~~d~vid~~g  267 (373)
                      .+|++|++.|
T Consensus        83 ~iD~li~nag   92 (227)
T PRK08862         83 APDVLVNNWT   92 (227)
T ss_pred             CCCEEEECCc
Confidence            6999999986

>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]

Probab=95.71  E-value=0.14  Score=46.30  Aligned_cols=101  Identities=17%  Similarity=0.141  Sum_probs=66.8

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc-CCcee-ec-CCCC--CccHHHHHHHHcCCCc
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTDF-VN-TSEH--DRPIQEVIAEMTNGGV  259 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l-g~~~v-i~-~~~~--~~~~~~~~~~~~~~~~  259 (373)
                      ...+ ++|||+|.|. |-.+-.+++.....++++++.+++=.++++++ +.... .+ ..-.  -.+-.+.+++... +|
T Consensus        74 h~~p-k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~f  150 (282)
T COG0421          74 HPNP-KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KF  150 (282)
T ss_pred             CCCC-CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cC
Confidence            3444 6999998765 44566777877777999999999999998874 22110 11 0000  0114445555443 79


Q ss_pred             cEEEE-ccCC---------hHhHHHHHHHhhcCCcEEEEE
Q 017336          260 DRSVE-CTGN---------IDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       260 d~vid-~~g~---------~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      |+||- +...         .++++.+.++|+++ |.++.-
T Consensus       151 DvIi~D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q  189 (282)
T COG0421         151 DVIIVDSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ  189 (282)
T ss_pred             CEEEEcCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence            99764 4332         47899999999997 998876

>PRK08643 acetoin reductase; Validated

Probab=95.70  E-value=0.065  Score=47.70  Aligned_cols=78  Identities=19%  Similarity=0.243  Sum_probs=49.5

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-e--ecCCCCCccHHHHHHHHc--CCC
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMT--NGG  258 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~  258 (373)
                      ++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+.+    .+... .  .|..+.+ ...+.+.+..  -++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRD-QVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHcCC
Confidence            578999987 8999999999999999 89999888766544322    23222 1  2222221 1222222221  137


Q ss_pred             ccEEEEccCC
Q 017336          259 VDRSVECTGN  268 (373)
Q Consensus       259 ~d~vid~~g~  268 (373)
                      +|++|.+.|.
T Consensus        80 id~vi~~ag~   89 (256)
T PRK08643         80 LNVVVNNAGV   89 (256)
T ss_pred             CCEEEECCCC
Confidence            9999999864

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.70  E-value=0.16  Score=44.10  Aligned_cols=102  Identities=18%  Similarity=0.247  Sum_probs=62.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh--------h-----------HHHHH----HhcCCce-eecCCCC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS--------K-----------RFEEA----KKFGVTD-FVNTSEH  243 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~--------~-----------~~~~~----~~lg~~~-vi~~~~~  243 (373)
                      +..+|+|+|.|++|..++..+-+.|..++..++-++        +           |.+.+    ++.+..- |...+..
T Consensus        29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f  108 (263)
T COG1179          29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF  108 (263)
T ss_pred             hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence            347899999999999999999999999888886543        1           11111    2222211 1111111


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCChHh-HHHHHHHhhcCCcEEEEEcCC
Q 017336          244 DRPIQEVIAEMTNGGVDRSVECTGNIDN-MISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       244 ~~~~~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      -  ..+.+.++...++|+|+||..+-.. ...+..|.+.+ =.++..+..
T Consensus       109 ~--t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Ga  155 (263)
T COG1179         109 I--TEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGA  155 (263)
T ss_pred             h--CHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeeccc
Confidence            0  2234666666699999999876433 33444566665 566665544

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.70  E-value=0.13  Score=45.14  Aligned_cols=34  Identities=38%  Similarity=0.502  Sum_probs=30.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      ..+|+|+|+|++|..++..+-+.|..+++.++.+
T Consensus        11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755          11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4689999999999999999999999999998765

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>CHL00194 ycf39 Ycf39; Provisional

Probab=95.69  E-value=0.073  Score=49.24  Aligned_cols=95  Identities=16%  Similarity=0.203  Sum_probs=60.9

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee-cCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          191 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV-NTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       191 ~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi-~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      +|||+|+ |-+|...+..+...|. +|.+++++.++...+...+++.+. |..+.     +.+.+... ++|+||++++.
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~-----~~l~~al~-g~d~Vi~~~~~   74 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSLP-----ETLPPSFK-GVTAIIDASTS   74 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCCH-----HHHHHHHC-CCCEEEECCCC
Confidence            6999997 9999999999988898 899998887766555555665432 22221     22333333 68999998763


Q ss_pred             hH------------hHHHHHHHhhcC-CcEEEEEcCC
Q 017336          269 ID------------NMISAFECVHDG-WGVAVLVGVP  292 (373)
Q Consensus       269 ~~------------~~~~~~~~l~~~-~g~~v~~g~~  292 (373)
                      ..            .....++.++.. -.+++.++..
T Consensus        75 ~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~  111 (317)
T CHL00194         75 RPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL  111 (317)
T ss_pred             CCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence            21            112334444443 1378887764

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=95.69  E-value=0.064  Score=48.38  Aligned_cols=80  Identities=29%  Similarity=0.323  Sum_probs=53.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc------eeecCCCCC--ccHHHHHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT------DFVNTSEHD--RPIQEVIAEM  254 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~------~vi~~~~~~--~~~~~~~~~~  254 (373)
                      .++.+||+|+ .++|.+++..+...|+ +|+.+++++++.+....    .+..      .+.|....+  ....+...+.
T Consensus         7 ~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~   85 (270)
T KOG0725|consen    7 AGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK   85 (270)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence            5788999987 7999999999999999 89999999887655432    2222      122332221  1123333334


Q ss_pred             cCCCccEEEEccCC
Q 017336          255 TNGGVDRSVECTGN  268 (373)
Q Consensus       255 ~~~~~d~vid~~g~  268 (373)
                      ..|+.|++++..|.
T Consensus        86 ~~GkidiLvnnag~   99 (270)
T KOG0725|consen   86 FFGKIDILVNNAGA   99 (270)
T ss_pred             hCCCCCEEEEcCCc
Confidence            34589999998774

>PRK06484 short chain dehydrogenase; Validated

Probab=95.68  E-value=0.17  Score=50.24  Aligned_cols=104  Identities=23%  Similarity=0.357  Sum_probs=66.9

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCcee---ecCCCCCccHHHHHHHHcC--CCc
Q 017336          187 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDF---VNTSEHDRPIQEVIAEMTN--GGV  259 (373)
Q Consensus       187 ~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~v---i~~~~~~~~~~~~~~~~~~--~~~  259 (373)
                      ..++++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.+ ++....   .|..+.+ ...+.+.+...  +.+
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~i  344 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITDEA-AVESAFAQIQARWGRL  344 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHH-HHHHHHHHHHHHcCCC
Confidence            35789999987 8999999999999999 89999998877666544 444321   2332221 12222222211  379


Q ss_pred             cEEEEccCChH--------------------------hHHHHHHHhhcCCcEEEEEcCCC
Q 017336          260 DRSVECTGNID--------------------------NMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       260 d~vid~~g~~~--------------------------~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      |++|++.|...                          ..+.++..+..+ |+++.++...
T Consensus       345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~~  403 (520)
T PRK06484        345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSIA  403 (520)
T ss_pred             CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECchh
Confidence            99999887410                          133444556554 8999887653

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=95.66  E-value=0.08  Score=47.80  Aligned_cols=93  Identities=19%  Similarity=0.171  Sum_probs=58.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCC---ceeecCCCCCccHHHHHHHHcCCCccE
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV---TDFVNTSEHDRPIQEVIAEMTNGGVDR  261 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~---~~vi~~~~~~~~~~~~~~~~~~~~~d~  261 (373)
                      ...+++++|+|+|++|.+++..+...|+ +|++++++.++.+.+ ++++.   .....       +.    +.....+|+
T Consensus       114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~-------~~----~~~~~~~Di  181 (270)
T TIGR00507       114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFS-------MD----ELPLHRVDL  181 (270)
T ss_pred             CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEec-------hh----hhcccCccE
Confidence            3457899999999999999988888898 899998987775544 33321   11111       11    111126899


Q ss_pred             EEEccCChHh--H---HHHHHHhhcCCcEEEEEcC
Q 017336          262 SVECTGNIDN--M---ISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       262 vid~~g~~~~--~---~~~~~~l~~~~g~~v~~g~  291 (373)
                      ||+|++....  .   ......++++ ..++.+..
T Consensus       182 vInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y  215 (270)
T TIGR00507       182 IINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVY  215 (270)
T ss_pred             EEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEecc
Confidence            9999876311  1   1123456664 55655543

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.66  E-value=0.085  Score=47.82  Aligned_cols=77  Identities=21%  Similarity=0.223  Sum_probs=56.1

Q ss_pred             CCCCCEEEEECCCH-HHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336          186 PERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       186 ~~~~~~vlI~G~g~-~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid  264 (373)
                      .-.|++|+|+|.|. +|...++++...|+ +|+++.+..+.                         +.+.+ ..+|+||+
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~~-------------------------L~~~~-~~aDIvI~  208 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQN-------------------------LPELV-KQADIIVG  208 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCchh-------------------------HHHHh-ccCCEEEE
Confidence            35788999999976 99999999999999 88888542111                         11111 26899999


Q ss_pred             ccCChHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          265 CTGNIDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       265 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ++|.+..+.  .+.++++ ..++.+|..
T Consensus       209 AtG~~~~v~--~~~lk~g-avViDvg~n  233 (283)
T PRK14192        209 AVGKPELIK--KDWIKQG-AVVVDAGFH  233 (283)
T ss_pred             ccCCCCcCC--HHHcCCC-CEEEEEEEe
Confidence            998766443  3568886 888877754

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.66  E-value=0.1  Score=45.23  Aligned_cols=35  Identities=23%  Similarity=0.308  Sum_probs=31.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      ...+|+|+|+|++|..+++.+.+.|..+++.++.+
T Consensus        27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            34689999999999999999999999889999876

>PRK06138 short chain dehydrogenase; Provisional

Probab=95.65  E-value=0.066  Score=47.43  Aligned_cols=79  Identities=22%  Similarity=0.291  Sum_probs=49.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c--CCce-ee--cCCCCCccHHHHHHHHc--CCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F--GVTD-FV--NTSEHDRPIQEVIAEMT--NGG  258 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-l--g~~~-vi--~~~~~~~~~~~~~~~~~--~~~  258 (373)
                      +++++||+|+ |.+|...++.+...|+ +|+.+.++.++.+...+ +  +... ++  |..+.. .+.+.+.+..  .++
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~i~~~~~~   81 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAE-AVEALVDFVAARWGR   81 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHcCC
Confidence            4679999987 8999999998888898 79998888765443322 2  3221 22  222211 1222222221  137


Q ss_pred             ccEEEEccCC
Q 017336          259 VDRSVECTGN  268 (373)
Q Consensus       259 ~d~vid~~g~  268 (373)
                      +|++|.+.|.
T Consensus        82 id~vi~~ag~   91 (252)
T PRK06138         82 LDVLVNNAGF   91 (252)
T ss_pred             CCEEEECCCC
Confidence            9999999884

>PRK05884 short chain dehydrogenase; Provisional

Probab=95.64  E-value=0.096  Score=45.74  Aligned_cols=74  Identities=23%  Similarity=0.294  Sum_probs=48.5

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCcee-ecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          191 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       191 ~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      +++|+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++++...+ .|..+.+ .+.+.+++. .+++|+++++.|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~-~~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTDPA-SLEEARGLF-PHHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCCHH-HHHHHHHHH-hhcCcEEEECCC
Confidence            5899987 8999999999888899 888888888776544 44454332 2332221 122223222 236899999865

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.64  E-value=0.22  Score=38.35  Aligned_cols=92  Identities=22%  Similarity=0.279  Sum_probs=61.5

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHh
Q 017336          192 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN  271 (373)
Q Consensus       192 vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  271 (373)
                      |+|+|.|.+|...++.++..+. +|++++.++++.+.+++.|... +.-+..+   .+.+++..-..++.++-+.+....
T Consensus         1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~~-i~gd~~~---~~~l~~a~i~~a~~vv~~~~~d~~   75 (116)
T PF02254_consen    1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVEV-IYGDATD---PEVLERAGIEKADAVVILTDDDEE   75 (116)
T ss_dssp             EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSEE-EES-TTS---HHHHHHTTGGCESEEEEESSSHHH
T ss_pred             eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhccccc-ccccchh---hhHHhhcCccccCEEEEccCCHHH
Confidence            6788999999999999999765 8999999999999999988653 3333222   123444432378999988887432


Q ss_pred             ---HHHHHHHhhcCCcEEEEE
Q 017336          272 ---MISAFECVHDGWGVAVLV  289 (373)
Q Consensus       272 ---~~~~~~~l~~~~g~~v~~  289 (373)
                         .....+.+.+. .+++..
T Consensus        76 n~~~~~~~r~~~~~-~~ii~~   95 (116)
T PF02254_consen   76 NLLIALLARELNPD-IRIIAR   95 (116)
T ss_dssp             HHHHHHHHHHHTTT-SEEEEE
T ss_pred             HHHHHHHHHHHCCC-CeEEEE
Confidence               22334444554 555543

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK06194 hypothetical protein; Provisional

Probab=95.63  E-value=0.068  Score=48.51  Aligned_cols=79  Identities=19%  Similarity=0.262  Sum_probs=49.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-Hhc---CCce-ee--cCCCCCccHHHHHHHHc--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF---GVTD-FV--NTSEHDRPIQEVIAEMT--NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~l---g~~~-vi--~~~~~~~~~~~~~~~~~--~~  257 (373)
                      .++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+ .++   +... ++  |..+. ..+.+.+....  .+
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~~~~~g   82 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDA-AQVEALADAALERFG   82 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence            3578999987 8999999998888999 899898876654433 222   3322 12  22221 11222222211  13


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus        83 ~id~vi~~Ag~   93 (287)
T PRK06194         83 AVHLLFNNAGV   93 (287)
T ss_pred             CCCEEEECCCC
Confidence            68999999875

>PRK12937 short chain dehydrogenase; Provisional

Probab=95.62  E-value=0.26  Score=43.39  Aligned_cols=101  Identities=16%  Similarity=0.179  Sum_probs=58.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh-hHHH----HHHhcCCce-e--ecCCCCCccHHHHHH---HHc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFE----EAKKFGVTD-F--VNTSEHDRPIQEVIA---EMT  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~-~~~~----~~~~lg~~~-v--i~~~~~~~~~~~~~~---~~~  255 (373)
                      +++++||+|+ |.+|...+..+...|+ +|+.+.++. ++.+    .+++.+... .  .|..+.+ .+.+.+.   +..
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~   81 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAA-AVTRLFDAAETAF   81 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHc
Confidence            4688999987 8999999999999999 666665543 2222    223334321 1  2222211 1222222   222


Q ss_pred             CCCccEEEEccCChH-------------------------hHHHHHHHhhcCCcEEEEEcCC
Q 017336          256 NGGVDRSVECTGNID-------------------------NMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       256 ~~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                       +++|++|.+.|...                         ....+++.+..+ |+++.++..
T Consensus        82 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~  141 (245)
T PRK12937         82 -GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG-GRIINLSTS  141 (245)
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC-cEEEEEeec
Confidence             37899999887410                         123344555565 888888764

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=95.61  E-value=0.081  Score=47.20  Aligned_cols=78  Identities=29%  Similarity=0.422  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-e--ecCCCCCccHHH---HHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQE---VIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-v--i~~~~~~~~~~~---~~~~~~~  256 (373)
                      +++++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.    +.+... .  .|..+.+ .+.+   .+.+.. 
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~-~i~~~~~~~~~~~-   87 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEA-DIERLAEETLERF-   87 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHh-
Confidence            4689999987 9999999999988999 8999988877655443    223221 1  2332221 1222   222222 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|.+.|.
T Consensus        88 ~~id~vi~~ag~   99 (259)
T PRK08213         88 GHVDILVNNAGA   99 (259)
T ss_pred             CCCCEEEECCCC
Confidence            368999999874

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.60  E-value=0.078  Score=47.23  Aligned_cols=79  Identities=16%  Similarity=0.287  Sum_probs=49.3

Q ss_pred             CCCEEEEECCC---HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce--e--ecCCCCC--ccHHHHHHHHcCCC
Q 017336          188 RGSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--F--VNTSEHD--RPIQEVIAEMTNGG  258 (373)
Q Consensus       188 ~~~~vlI~G~g---~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~--v--i~~~~~~--~~~~~~~~~~~~~~  258 (373)
                      .++++||+|++   ++|.++++.+...|+ +|+.+.++++..+.++++....  .  .|..+..  ..+.+.+.+.. +.
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~   83 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERV-GK   83 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHh-CC
Confidence            47899999874   899999998888999 7888877754444444442211  1  2322211  11222333322 37


Q ss_pred             ccEEEEccCC
Q 017336          259 VDRSVECTGN  268 (373)
Q Consensus       259 ~d~vid~~g~  268 (373)
                      +|+++++.|.
T Consensus        84 iD~lv~nAg~   93 (252)
T PRK06079         84 IDGIVHAIAY   93 (252)
T ss_pred             CCEEEEcccc
Confidence            9999998873

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=95.59  E-value=0.04  Score=45.77  Aligned_cols=93  Identities=17%  Similarity=0.298  Sum_probs=60.5

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc--eeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          191 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       191 ~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~--~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .|.|+|+ |-+|...++=|+..|. .|+++.++++|....+...+-  -+++..       + +.+.. .++|+||++.|
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~q~Difd~~-------~-~a~~l-~g~DaVIsA~~   71 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTILQKDIFDLT-------S-LASDL-AGHDAVISAFG   71 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceeecccccChh-------h-hHhhh-cCCceEEEecc
Confidence            5788988 9999999999999998 899999999886544222110  011111       1 11111 27999999988


Q ss_pred             Ch---------HhHHHHHHHhhc-CCcEEEEEcCCC
Q 017336          268 NI---------DNMISAFECVHD-GWGVAVLVGVPS  293 (373)
Q Consensus       268 ~~---------~~~~~~~~~l~~-~~g~~v~~g~~~  293 (373)
                      ..         ...+..+..|+. +..|+..+|..+
T Consensus        72 ~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG  107 (211)
T COG2910          72 AGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG  107 (211)
T ss_pred             CCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence            64         123346666666 335788887643

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.59  E-value=0.093  Score=48.96  Aligned_cols=34  Identities=38%  Similarity=0.485  Sum_probs=31.1

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      ..+|+|+|+|++|..+++.+...|..++..++.+
T Consensus        24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4789999999999999999999999999999875

>PLN02253 xanthoxin dehydrogenase

Probab=95.58  E-value=0.071  Score=48.19  Aligned_cols=78  Identities=19%  Similarity=0.212  Sum_probs=49.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCC--c-ee--ecCCCCCccHHHH---HHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV--T-DF--VNTSEHDRPIQEV---IAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~--~-~v--i~~~~~~~~~~~~---~~~~~~~  257 (373)
                      .++++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+ ++++.  . ..  .|..+.+ .+.+.   +.+.. +
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~~-g   93 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVED-DVSRAVDFTVDKF-G   93 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHH-HHHHHHHHHHHHh-C
Confidence            3688999987 8999999988888899 888888876554433 33322  1 11  2332221 12222   22222 3


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus        94 ~id~li~~Ag~  104 (280)
T PLN02253         94 TLDIMVNNAGL  104 (280)
T ss_pred             CCCEEEECCCc
Confidence            79999998874

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=95.58  E-value=0.12  Score=44.18  Aligned_cols=76  Identities=29%  Similarity=0.285  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c----CCcee-ecCCCCCccHHHHHHHHcCCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTDF-VNTSEHDRPIQEVIAEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-l----g~~~v-i~~~~~~~~~~~~~~~~~~~~~d  260 (373)
                      ++++++|+|+ |.+|..++..+...|+ +|+.++++.++.+.+.+ +    +.... .+..+    . +.+.+... +.|
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~----~-~~~~~~~~-~~d   99 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD----D-AARAAAIK-GAD   99 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC----H-HHHHHHHh-cCC
Confidence            5689999997 9999998888888887 89988888877655433 2    33211 11111    1 11222222 689


Q ss_pred             EEEEccCChH
Q 017336          261 RSVECTGNID  270 (373)
Q Consensus       261 ~vid~~g~~~  270 (373)
                      +||.++..+.
T Consensus       100 iVi~at~~g~  109 (194)
T cd01078         100 VVFAAGAAGV  109 (194)
T ss_pred             EEEECCCCCc
Confidence            9999987644

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=95.58  E-value=0.08  Score=49.08  Aligned_cols=78  Identities=22%  Similarity=0.345  Sum_probs=49.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCC---c-ee--ecCCCCCccHHHHHHHH--cCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV---T-DF--VNTSEHDRPIQEVIAEM--TNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~---~-~v--i~~~~~~~~~~~~~~~~--~~~  257 (373)
                      +++++||+|+ |++|..+++.+...|+ +|++++++.++.+.+ +++..   . .+  .|..+.+ .+.+.+.+.  ..+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~~   82 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLD-SVRRFVDDFRALGK   82 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHH-HHHHHHHHHHHhCC
Confidence            4688999987 8999999998888898 899998887765443 33321   1 11  2322211 122222221  123


Q ss_pred             CccEEEEccC
Q 017336          258 GVDRSVECTG  267 (373)
Q Consensus       258 ~~d~vid~~g  267 (373)
                      ++|++|++.|
T Consensus        83 ~iD~li~nAg   92 (322)
T PRK07453         83 PLDALVCNAA   92 (322)
T ss_pred             CccEEEECCc
Confidence            6999999987

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=95.58  E-value=0.11  Score=47.30  Aligned_cols=36  Identities=22%  Similarity=0.352  Sum_probs=31.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      .+++++|+|+|++|.+++..+...|+++|+++.++.
T Consensus       125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            578999999999999988888899997799998885

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=95.58  E-value=0.067  Score=47.73  Aligned_cols=78  Identities=28%  Similarity=0.302  Sum_probs=49.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh---cCCce---eecCCCCCccHHHHHHHHc--CCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD---FVNTSEHDRPIQEVIAEMT--NGG  258 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~---lg~~~---vi~~~~~~~~~~~~~~~~~--~~~  258 (373)
                      .++++||+|+ |.+|.++++.+...|+ +|+.+++++...+..++   .+.+.   ..|..+.+ ...+.+.+..  .++
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~   84 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLETYA-GAQAAMAAAVEAFGR   84 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHH-HHHHHHHHHHHHcCC
Confidence            4688999987 8999999999988999 78888887543333333   34332   12333221 1222233221  137


Q ss_pred             ccEEEEccC
Q 017336          259 VDRSVECTG  267 (373)
Q Consensus       259 ~d~vid~~g  267 (373)
                      +|+++++.|
T Consensus        85 id~lv~nAg   93 (260)
T PRK12823         85 IDVLINNVG   93 (260)
T ss_pred             CeEEEECCc
Confidence            999999987

>PRK06914 short chain dehydrogenase; Provisional

Probab=95.57  E-value=0.08  Score=47.82  Aligned_cols=77  Identities=17%  Similarity=0.247  Sum_probs=49.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCC--c-ee--ecCCCCCccHHHHHHHHc--C
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV--T-DF--VNTSEHDRPIQEVIAEMT--N  256 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~--~-~v--i~~~~~~~~~~~~~~~~~--~  256 (373)
                      ++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+    .+.  . .+  .|..+. ..+.+ +.+..  -
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~-~~~~~~~~   79 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQ-NSIHN-FQLVLKEI   79 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCH-HHHHH-HHHHHHhc
Confidence            578999997 8999999998888899 78888887766544422    222  1 11  233221 11222 33322  1


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|+++.+.|.
T Consensus        80 ~~id~vv~~ag~   91 (280)
T PRK06914         80 GRIDLLVNNAGY   91 (280)
T ss_pred             CCeeEEEECCcc
Confidence            378999999874

>PRK06198 short chain dehydrogenase; Provisional

Probab=95.57  E-value=0.09  Score=46.85  Aligned_cols=80  Identities=24%  Similarity=0.302  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHH----HHHhcCCce---eecCCCCCccHHHHHHHHc--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE----EAKKFGVTD---FVNTSEHDRPIQEVIAEMT--NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~----~~~~lg~~~---vi~~~~~~~~~~~~~~~~~--~~  257 (373)
                      .+++++|+|+ |.+|..+++.+...|++.|++++++.++.+    .+++.+...   ..|..+.+ .+.+.+....  -+
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g   83 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVE-DCRRVVAAADEAFG   83 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHhC
Confidence            4688999998 899999999999999944999988765544    223344332   12332221 1222222211  13


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus        84 ~id~li~~ag~   94 (260)
T PRK06198         84 RLDALVNAAGL   94 (260)
T ss_pred             CCCEEEECCCc
Confidence            69999999874

>PRK06179 short chain dehydrogenase; Provisional

Probab=95.57  E-value=0.034  Score=50.00  Aligned_cols=76  Identities=26%  Similarity=0.392  Sum_probs=49.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHc--CCCccEEEE
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRSVE  264 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~--~~~~d~vid  264 (373)
                      +++++|+|+ |.+|...++.+...|+ +|++++++.++.+..  .+...+ .|..+.+ .+.+.+....  .+.+|++|+
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~-~~~~~~~~~~~~~g~~d~li~   79 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGVELLELDVTDDA-SVQAAVDEVIARAGRIDVLVN   79 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCCeeEEeecCCHH-HHHHHHHHHHHhCCCCCEEEE
Confidence            568999987 8999999988888899 799998876654322  122222 2332221 2333333322  136899999


Q ss_pred             ccCC
Q 017336          265 CTGN  268 (373)
Q Consensus       265 ~~g~  268 (373)
                      +.|.
T Consensus        80 ~ag~   83 (270)
T PRK06179         80 NAGV   83 (270)
T ss_pred             CCCC
Confidence            9884

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.57  E-value=0.1  Score=41.70  Aligned_cols=34  Identities=29%  Similarity=0.443  Sum_probs=29.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      .++|+|+|+|++|..++..+-+.|..++..++.+
T Consensus         2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d   35 (135)
T PF00899_consen    2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDD   35 (135)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred             CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCc
Confidence            4789999999999999999999999889988654

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK05717 oxidoreductase; Validated

Probab=95.57  E-value=0.084  Score=46.99  Aligned_cols=79  Identities=22%  Similarity=0.294  Sum_probs=50.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCce-e--ecCCCCCccHHHHHHHHcC--CCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-F--VNTSEHDRPIQEVIAEMTN--GGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~-v--i~~~~~~~~~~~~~~~~~~--~~~d  260 (373)
                      .++++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+ ++++... .  .|..+.+ .+.+.+.+...  +++|
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~id   86 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADEA-QVAAGVAEVLGQFGRLD   86 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHH-HHHHHHHHHHHHhCCCC
Confidence            4688999987 8999999999888898 888888776554443 3444321 1  2222211 12222233221  3689


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      ++|.+.|.
T Consensus        87 ~li~~ag~   94 (255)
T PRK05717         87 ALVCNAAI   94 (255)
T ss_pred             EEEECCCc
Confidence            99998874

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.56  E-value=0.17  Score=43.88  Aligned_cols=102  Identities=22%  Similarity=0.180  Sum_probs=62.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCceeec-------CCCCCcc-HHHHHHHHc--
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVN-------TSEHDRP-IQEVIAEMT--  255 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~vi~-------~~~~~~~-~~~~~~~~~--  255 (373)
                      .++.+||+.|+|. |.-++-+|. .|. .|++++.++.-.+.+ ++.+......       +...+-. ....+.+..  
T Consensus        33 ~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  109 (213)
T TIGR03840        33 PAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA  109 (213)
T ss_pred             CCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence            5678999999876 677777764 699 899999999888875 3333321000       0000000 000011111  


Q ss_pred             -CCCccEEEEccCC--------hHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          256 -NGGVDRSVECTGN--------IDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       256 -~~~~d~vid~~g~--------~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                       .+.||.|+|+..-        ...+....++|+|+ |++++....
T Consensus       110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~~  154 (213)
T TIGR03840       110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITLD  154 (213)
T ss_pred             cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEEE
Confidence             1368999996531        24678999999997 987766553

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK07063 short chain dehydrogenase; Provisional

Probab=95.56  E-value=0.078  Score=47.33  Aligned_cols=79  Identities=22%  Similarity=0.240  Sum_probs=50.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hc-----CCce-e--ecCCCCCccHHHHHHHHc--
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF-----GVTD-F--VNTSEHDRPIQEVIAEMT--  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~l-----g~~~-v--i~~~~~~~~~~~~~~~~~--  255 (373)
                      .++++||+|+ |++|..++..+...|+ +|+.+++++++.+.+. ++     +... +  .|..+.. .+.+.+.+..  
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~   83 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAA-SVAAAVAAAEEA   83 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHH-HHHHHHHHHHHH
Confidence            4689999987 8999999999999999 7888888876655432 22     2221 1  2322211 1222222221  


Q ss_pred             CCCccEEEEccCC
Q 017336          256 NGGVDRSVECTGN  268 (373)
Q Consensus       256 ~~~~d~vid~~g~  268 (373)
                      -+++|++|++.|.
T Consensus        84 ~g~id~li~~ag~   96 (260)
T PRK07063         84 FGPLDVLVNNAGI   96 (260)
T ss_pred             hCCCcEEEECCCc
Confidence            1379999999873

>PRK07035 short chain dehydrogenase; Provisional

Probab=95.56  E-value=0.082  Score=46.90  Aligned_cols=78  Identities=22%  Similarity=0.261  Sum_probs=49.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-ee--cCCCCCccHHHHHHHHcC--C
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHDRPIQEVIAEMTN--G  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~-vi--~~~~~~~~~~~~~~~~~~--~  257 (373)
                      .++++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.+    .+... .+  |..+.. ...+.+.+...  +
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   84 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEME-QIDALFAHIRERHG   84 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHcC
Confidence            3578999987 8999999999999999 89999888765544322    23221 22  222211 12222222211  3


Q ss_pred             CccEEEEccC
Q 017336          258 GVDRSVECTG  267 (373)
Q Consensus       258 ~~d~vid~~g  267 (373)
                      .+|+++++.|
T Consensus        85 ~id~li~~ag   94 (252)
T PRK07035         85 RLDILVNNAA   94 (252)
T ss_pred             CCCEEEECCC
Confidence            6899999887

>PRK08226 short chain dehydrogenase; Provisional

Probab=95.55  E-value=0.083  Score=47.20  Aligned_cols=79  Identities=20%  Similarity=0.220  Sum_probs=49.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh---cCCce-e--ecCCCCCccHHHHHHHHc--CCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD-F--VNTSEHDRPIQEVIAEMT--NGG  258 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~---lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~  258 (373)
                      .++++||+|+ |.+|...+..+...|+ +|+.++++++..+.+++   .+... .  .|..+.. ++.+.+.+..  .+.
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~~~   82 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPA-SVAAAIKRAKEKEGR   82 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHH-HHHHHHHHHHHHcCC
Confidence            4689999987 8999999999988999 79999887654443333   23321 1  2222211 1222222211  136


Q ss_pred             ccEEEEccCC
Q 017336          259 VDRSVECTGN  268 (373)
Q Consensus       259 ~d~vid~~g~  268 (373)
                      +|++|.+.|.
T Consensus        83 id~vi~~ag~   92 (263)
T PRK08226         83 IDILVNNAGV   92 (263)
T ss_pred             CCEEEECCCc
Confidence            8999998873

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.55  E-value=0.12  Score=45.85  Aligned_cols=35  Identities=31%  Similarity=0.443  Sum_probs=30.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      +.+|+|+|+|++|..+++.+.+.|.++++.++.+.
T Consensus        24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            47899999999999999999999999998887643

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK07074 short chain dehydrogenase; Provisional

Probab=95.54  E-value=0.093  Score=46.72  Aligned_cols=78  Identities=22%  Similarity=0.337  Sum_probs=48.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcC---Cce-eecCCCCCccHHHHHHHHc--CCCcc
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFG---VTD-FVNTSEHDRPIQEVIAEMT--NGGVD  260 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg---~~~-vi~~~~~~~~~~~~~~~~~--~~~~d  260 (373)
                      ++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+. ++.   +.. ..|..+.+ .+.+.+.+..  -+++|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~d   79 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAA-SLAAALANAAAERGPVD   79 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHcCCCC
Confidence            568999998 8999999988888898 7999988877655443 232   111 12222211 1222222221  13689


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      +++.+.|.
T Consensus        80 ~vi~~ag~   87 (257)
T PRK07074         80 VLVANAGA   87 (257)
T ss_pred             EEEECCCC
Confidence            99999874

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.54  E-value=0.16  Score=40.96  Aligned_cols=32  Identities=28%  Similarity=0.396  Sum_probs=28.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      +|+|+|+|++|...+..+.+.|.+++..++.+
T Consensus         1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            48999999999999999999999889988765

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK06181 short chain dehydrogenase; Provisional

Probab=95.54  E-value=0.084  Score=47.18  Aligned_cols=78  Identities=26%  Similarity=0.372  Sum_probs=48.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-ee--cCCCCCccHHHHHHHHcC--CC
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMTN--GG  258 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-vi--~~~~~~~~~~~~~~~~~~--~~  258 (373)
                      ++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+    +..+... ++  |..+. ..+.+.+.+...  ++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDA-EACERLIEAAVARFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence            367999988 8999999999989998 899998887654433    2233322 11  22221 112222322211  36


Q ss_pred             ccEEEEccCC
Q 017336          259 VDRSVECTGN  268 (373)
Q Consensus       259 ~d~vid~~g~  268 (373)
                      +|++|.+.|.
T Consensus        79 id~vi~~ag~   88 (263)
T PRK06181         79 IDILVNNAGI   88 (263)
T ss_pred             CCEEEECCCc
Confidence            8999999874

>PRK08219 short chain dehydrogenase; Provisional

Probab=95.52  E-value=0.16  Score=44.09  Aligned_cols=74  Identities=19%  Similarity=0.196  Sum_probs=46.0

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCC--CccEEEEc
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNG--GVDRSVEC  265 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~--~~d~vid~  265 (373)
                      +++||+|+ |.+|...+..+... . +|++++++.++.+.+.+ +..-.++..+-.+   .+.+.+...+  +.|++|.+
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~id~vi~~   78 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTD---PEAIAAAVEQLGRLDVLVHN   78 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCC---HHHHHHHHHhcCCCCEEEEC
Confidence            68999987 89999888777666 6 79999888776555443 2111222111111   1223333322  69999999


Q ss_pred             cCC
Q 017336          266 TGN  268 (373)
Q Consensus       266 ~g~  268 (373)
                      .|.
T Consensus        79 ag~   81 (227)
T PRK08219         79 AGV   81 (227)
T ss_pred             CCc
Confidence            874

>PRK07856 short chain dehydrogenase; Provisional

Probab=95.51  E-value=0.065  Score=47.63  Aligned_cols=77  Identities=19%  Similarity=0.258  Sum_probs=47.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-eecCCCCCccHHHHHHHHc--CCCccEEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMT--NGGVDRSV  263 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~-vi~~~~~~~~~~~~~~~~~--~~~~d~vi  263 (373)
                      .++++||+|+ |.+|...++.+...|+ +|+.++++.++.  .....+.. ..|..+.. .+.+.+....  -+++|++|
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~~--~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~vi   80 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPET--VDGRPAEFHAADVRDPD-QVAALVDAIVERHGRLDVLV   80 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhhh--hcCCceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence            4789999987 8999999999988999 888888876551  11111211 12322211 1222222221  13689999


Q ss_pred             EccCC
Q 017336          264 ECTGN  268 (373)
Q Consensus       264 d~~g~  268 (373)
                      .+.|.
T Consensus        81 ~~ag~   85 (252)
T PRK07856         81 NNAGG   85 (252)
T ss_pred             ECCCC
Confidence            98873

>PLN03139 formate dehydrogenase; Provisional

Probab=95.51  E-value=0.065  Score=50.76  Aligned_cols=90  Identities=19%  Similarity=0.162  Sum_probs=59.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .|++|.|+|.|.+|...++.++.+|. +|++.+++....+..++.|+..+    . +  +.+.+    . ..|+|+.++.
T Consensus       198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~----~-~--l~ell----~-~sDvV~l~lP  264 (386)
T PLN03139        198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE----E-D--LDAML----P-KCDVVVINTP  264 (386)
T ss_pred             CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec----C-C--HHHHH----h-hCCEEEEeCC
Confidence            57899999999999999999999999 89999877544444455554321    0 1  22222    1 3677777766


Q ss_pred             ChH----hH-HHHHHHhhcCCcEEEEEcC
Q 017336          268 NID----NM-ISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       268 ~~~----~~-~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..+    .+ ...+..|+++ ..+|.++-
T Consensus       265 lt~~T~~li~~~~l~~mk~g-a~lIN~aR  292 (386)
T PLN03139        265 LTEKTRGMFNKERIAKMKKG-VLIVNNAR  292 (386)
T ss_pred             CCHHHHHHhCHHHHhhCCCC-eEEEECCC
Confidence            322    11 2566777775 66666654

>PRK06125 short chain dehydrogenase; Provisional

Probab=95.51  E-value=0.15  Score=45.50  Aligned_cols=77  Identities=26%  Similarity=0.371  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c----CCce-e--ecCCCCCccHHHHHHHHcCCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTD-F--VNTSEHDRPIQEVIAEMTNGG  258 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-l----g~~~-v--i~~~~~~~~~~~~~~~~~~~~  258 (373)
                      .++++||+|+ +++|...++.+...|+ +|++++++.++.+.+.+ +    +... .  .|..+.+ .+.+.+. .. ++
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~-~~~~~~~-~~-g~   81 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPE-AREQLAA-EA-GD   81 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHH-HHHHHHH-Hh-CC
Confidence            3689999988 8999999999888999 89999888776554322 2    3221 2  2222211 1222222 22 47


Q ss_pred             ccEEEEccCC
Q 017336          259 VDRSVECTGN  268 (373)
Q Consensus       259 ~d~vid~~g~  268 (373)
                      +|++|++.|.
T Consensus        82 id~lv~~ag~   91 (259)
T PRK06125         82 IDILVNNAGA   91 (259)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>PRK07576 short chain dehydrogenase; Provisional

Probab=95.50  E-value=0.1  Score=46.83  Aligned_cols=78  Identities=22%  Similarity=0.324  Sum_probs=49.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~  257 (373)
                      +++++||+|+ |.+|...++.+...|+ +|+.+++++++.+..    .+.+... .  .|..+.+ .+.+.+.+..  .+
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~i~~~~~~~~~~~~   85 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYA-AVEAAFAQIADEFG   85 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHH-HHHHHHHHHHHHcC
Confidence            5789999987 8999999999989999 799998887654433    2223221 1  2332211 1222233322  13


Q ss_pred             CccEEEEccC
Q 017336          258 GVDRSVECTG  267 (373)
Q Consensus       258 ~~d~vid~~g  267 (373)
                      ++|++|.+.|
T Consensus        86 ~iD~vi~~ag   95 (264)
T PRK07576         86 PIDVLVSGAA   95 (264)
T ss_pred             CCCEEEECCC
Confidence            6899998875

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=95.49  E-value=0.094  Score=46.69  Aligned_cols=78  Identities=24%  Similarity=0.332  Sum_probs=50.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCce-e--ecCCCCCccHHHHHHHHc--CCCccE
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-F--VNTSEHDRPIQEVIAEMT--NGGVDR  261 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~~d~  261 (373)
                      ++++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.+ ++... .  .|..+.+ ...+.+.+..  .+++|+
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQD-SIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHH-HHHHHHHHHHHHcCCCCE
Confidence            678999987 8999999999999999 89999888877655433 33221 1  2222211 1222222211  136899


Q ss_pred             EEEccCC
Q 017336          262 SVECTGN  268 (373)
Q Consensus       262 vid~~g~  268 (373)
                      ++.+.|.
T Consensus        84 li~~ag~   90 (257)
T PRK07067         84 LFNNAAL   90 (257)
T ss_pred             EEECCCc
Confidence            9998763

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=95.48  E-value=0.45  Score=36.76  Aligned_cols=87  Identities=23%  Similarity=0.345  Sum_probs=59.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHc--CCcEEEEEcCChhHHHH-HHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          191 SVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~--g~~~V~~~~~~~~~~~~-~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      +|+|+|.|..|..-+.-++..  +.+-+.++++++++.+. .+++|.. .+.  +    +.+.+..   ..+|+|+.++.
T Consensus         2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~~~--~----~~~ll~~---~~~D~V~I~tp   71 (120)
T PF01408_consen    2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-VYT--D----LEELLAD---EDVDAVIIATP   71 (120)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-EES--S----HHHHHHH---TTESEEEEESS
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-chh--H----HHHHHHh---hcCCEEEEecC
Confidence            588999999998877666555  45234456677766665 4667877 332  1    3333332   27999999999


Q ss_pred             ChHhHHHHHHHhhcCCcEEEEE
Q 017336          268 NIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       268 ~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      ...+.+.+..++..+  .-+++
T Consensus        72 ~~~h~~~~~~~l~~g--~~v~~   91 (120)
T PF01408_consen   72 PSSHAEIAKKALEAG--KHVLV   91 (120)
T ss_dssp             GGGHHHHHHHHHHTT--SEEEE
T ss_pred             CcchHHHHHHHHHcC--CEEEE
Confidence            988889999999984  45555

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>PRK12367 short chain dehydrogenase; Provisional

Probab=95.48  E-value=0.11  Score=46.05  Aligned_cols=73  Identities=22%  Similarity=0.380  Sum_probs=46.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh-hHHHHHHhcCCcee--ecCCCCCccHHHHHHHHcCCCccEEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDF--VNTSEHDRPIQEVIAEMTNGGVDRSV  263 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~-~~~~~~~~lg~~~v--i~~~~~~~~~~~~~~~~~~~~~d~vi  263 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++. ++.+.... +....  .|..+    . +.+.+.. +++|++|
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~----~-~~~~~~~-~~iDilV   84 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWECGK----E-ESLDKQL-ASLDVLI   84 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeCCC----H-HHHHHhc-CCCCEEE
Confidence            3589999987 8999999999889999 888887765 22222111 11122  22222    1 2233333 3699999


Q ss_pred             EccCC
Q 017336          264 ECTGN  268 (373)
Q Consensus       264 d~~g~  268 (373)
                      ++.|.
T Consensus        85 nnAG~   89 (245)
T PRK12367         85 LNHGI   89 (245)
T ss_pred             ECCcc
Confidence            99874

>PLN02476 O-methyltransferase

Probab=95.48  E-value=0.15  Score=45.98  Aligned_cols=107  Identities=21%  Similarity=0.211  Sum_probs=69.6

Q ss_pred             hccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHc-
Q 017336          182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-  255 (373)
Q Consensus       182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~-  255 (373)
                      .+.+..+.++||=+|.+. |..++.+|+.++ -.+|++++.+++..+.+++    .|...-+.....+  ..+.+.++. 
T Consensus       112 ~L~~~~~ak~VLEIGT~t-GySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~Gd--A~e~L~~l~~  188 (278)
T PLN02476        112 MLVQILGAERCIEVGVYT-GYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGL--AAESLKSMIQ  188 (278)
T ss_pred             HHHHhcCCCeEEEecCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHh
Confidence            345667789999998733 666667777653 2279999999988877754    5664322222222  444444432 


Q ss_pred             ---CCCccEEEEccCCh---HhHHHHHHHhhcCCcEEEEEcCC
Q 017336          256 ---NGGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       256 ---~~~~d~vid~~g~~---~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                         .+.||.||--....   +.++.+++.|+++ |.++.=+..
T Consensus       189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~DNvL  230 (278)
T PLN02476        189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMDNVL  230 (278)
T ss_pred             cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEecCc
Confidence               23799987665543   5678999999997 888765443

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=95.47  E-value=0.041  Score=50.10  Aligned_cols=96  Identities=23%  Similarity=0.327  Sum_probs=57.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc-eeecCCCCCccHHHHHHHHcCCCcc
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTNGGVD  260 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~-~vi~~~~~~~~~~~~~~~~~~~~~d  260 (373)
                      ..++++||=+|+|. |.+++..++ +|+++|++++.++...+.+++    -|.. .+......+         ...++||
T Consensus       159 ~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~---------~~~~~~d  227 (295)
T PF06325_consen  159 VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSED---------LVEGKFD  227 (295)
T ss_dssp             SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSC---------TCCS-EE
T ss_pred             ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEecc---------cccccCC
Confidence            56788999888743 444444333 598899999999877666654    1222 221111111         1124899


Q ss_pred             EEEEccCCh---HhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          261 RSVECTGNI---DNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       261 ~vid~~g~~---~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +|+-..-..   .......+.|+++ |.+++-|...
T Consensus       228 lvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~  262 (295)
T PF06325_consen  228 LVVANILADVLLELAPDIASLLKPG-GYLILSGILE  262 (295)
T ss_dssp             EEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred             EEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence            999765543   2344566778887 9999887764

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.45  E-value=0.24  Score=44.27  Aligned_cols=78  Identities=17%  Similarity=0.359  Sum_probs=46.3

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCcEEEEEcCCh---hHHHHH-Hhc-CCce-e--ecCCCCCccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSS---KRFEEA-KKF-GVTD-F--VNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~---g~~G~~ai~la~~~g~~~V~~~~~~~---~~~~~~-~~l-g~~~-v--i~~~~~~~~~~~~~~~~~~  256 (373)
                      .++++||+|+   +++|.++++.+...|+ +|+.+.++.   ++.+.+ +++ +... .  .|..+.+ ...+.+++...
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~   83 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDE-EITACFETIKE   83 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHH-HHHHHHHHHHH
Confidence            4689999986   4999999888888999 788776543   333333 333 2211 1  2332221 12222322221


Q ss_pred             --CCccEEEEccC
Q 017336          257 --GGVDRSVECTG  267 (373)
Q Consensus       257 --~~~d~vid~~g  267 (373)
                        +++|+++++.|
T Consensus        84 ~~g~ld~lv~nag   96 (257)
T PRK08594         84 EVGVIHGVAHCIA   96 (257)
T ss_pred             hCCCccEEEECcc
Confidence              47999999876

>PRK06114 short chain dehydrogenase; Provisional

Probab=95.45  E-value=0.1  Score=46.48  Aligned_cols=79  Identities=20%  Similarity=0.255  Sum_probs=48.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh-H-HHH---HHhcCCce-e--ecCCCCCccHHHHHHHHc--C
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-R-FEE---AKKFGVTD-F--VNTSEHDRPIQEVIAEMT--N  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~-~-~~~---~~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~  256 (373)
                      .++++||+|+ +++|.++++.+...|+ +|++++++++ . .+.   +++.+... .  .|..+.+ .+.+.+.+..  -
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~   84 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKA-DLRAAVARTEAEL   84 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            4689999987 8999999999999999 7888877643 2 222   23334322 1  2222211 1323233221  1


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|++.|.
T Consensus        85 g~id~li~~ag~   96 (254)
T PRK06114         85 GALTLAVNAAGI   96 (254)
T ss_pred             CCCCEEEECCCC
Confidence            378999999874

>PRK05875 short chain dehydrogenase; Provisional

Probab=95.44  E-value=0.097  Score=47.16  Aligned_cols=78  Identities=22%  Similarity=0.415  Sum_probs=49.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-Hhc---C--Cc-eee--cCCCCCccHHHHHHHHcC-
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF---G--VT-DFV--NTSEHDRPIQEVIAEMTN-  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~l---g--~~-~vi--~~~~~~~~~~~~~~~~~~-  256 (373)
                      +++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.. +++   +  .. .++  |..+.+ .+.+.+.+... 
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~   83 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDED-QVARAVDAATAW   83 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHH-HHHHHHHHHHHH
Confidence            3689999997 8999999999999999 899998887654432 222   1  11 122  322211 12223332221 


Q ss_pred             -CCccEEEEccC
Q 017336          257 -GGVDRSVECTG  267 (373)
Q Consensus       257 -~~~d~vid~~g  267 (373)
                       +++|++|.+.|
T Consensus        84 ~~~~d~li~~ag   95 (276)
T PRK05875         84 HGRLHGVVHCAG   95 (276)
T ss_pred             cCCCCEEEECCC
Confidence             37899999887

>PRK08317 hypothetical protein; Provisional

Probab=95.43  E-value=0.083  Score=46.34  Aligned_cols=102  Identities=25%  Similarity=0.389  Sum_probs=68.6

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHhc--CC-ce--eecCCCCCccHHHHHHHH
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKF--GV-TD--FVNTSEHDRPIQEVIAEM  254 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~l--g~-~~--vi~~~~~~~~~~~~~~~~  254 (373)
                      .+...+.++++||-+|+|. |..+..+++..+ ..++++++.+++..+.+++.  .. ..  ++..+...  +     ..
T Consensus        12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~--~-----~~   83 (241)
T PRK08317         12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADG--L-----PF   83 (241)
T ss_pred             HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccccc--C-----CC
Confidence            4567788999999999976 888888888773 23899999999888887664  11 11  11111110  0     11


Q ss_pred             cCCCccEEEEcc-----C-ChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          255 TNGGVDRSVECT-----G-NIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       255 ~~~~~d~vid~~-----g-~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..+.+|+|+...     . ....+..+.++|+++ |.+++...
T Consensus        84 ~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  125 (241)
T PRK08317         84 PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLDT  125 (241)
T ss_pred             CCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEec
Confidence            224789888642     1 225788999999997 99987653

>PRK05876 short chain dehydrogenase; Provisional

Probab=95.43  E-value=0.09  Score=47.54  Aligned_cols=79  Identities=20%  Similarity=0.247  Sum_probs=50.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~  257 (373)
                      .++++||+|+ |++|.+.+..+...|+ +|+.++++.++.+.+    ++.+... .  .|..+.+ .+.+.+.+..  -+
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g   82 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHRE-EVTHLADEAFRLLG   82 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHH-HHHHHHHHHHHHcC
Confidence            4688999987 8999999999989999 788888887665433    2234322 1  2222211 1222222211  13


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus        83 ~id~li~nAg~   93 (275)
T PRK05876         83 HVDVVFSNAGI   93 (275)
T ss_pred             CCCEEEECCCc
Confidence            68999998873

>PRK09242 tropinone reductase; Provisional

Probab=95.41  E-value=0.1  Score=46.52  Aligned_cols=79  Identities=19%  Similarity=0.263  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c-----CCce-e--ecCCCCCccHHHHHHHHc--
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F-----GVTD-F--VNTSEHDRPIQEVIAEMT--  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-l-----g~~~-v--i~~~~~~~~~~~~~~~~~--  255 (373)
                      .++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+ +     +... .  .|..+.+ .+.+.+.+..  
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~   85 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDE-DRRAILDWVEDH   85 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHH-HHHHHHHHHHHH
Confidence            4789999987 8999999999999999 79998888776554432 1     2221 1  2322211 1222222221  


Q ss_pred             CCCccEEEEccCC
Q 017336          256 NGGVDRSVECTGN  268 (373)
Q Consensus       256 ~~~~d~vid~~g~  268 (373)
                      -+++|+++.+.|.
T Consensus        86 ~g~id~li~~ag~   98 (257)
T PRK09242         86 WDGLHILVNNAGG   98 (257)
T ss_pred             cCCCCEEEECCCC
Confidence            1379999999884

>PRK07985 oxidoreductase; Provisional

Probab=95.39  E-value=0.23  Score=45.43  Aligned_cols=103  Identities=17%  Similarity=0.144  Sum_probs=60.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh--hHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHc--
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~--~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~--  255 (373)
                      .++++||+|+ |++|.++++.+...|+ +|+.+.++.  ++.+.+    ++.+... .  .|..+.+ .+.+.+.+..  
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~  125 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEK-FARSLVHEAHKA  125 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHH-HHHHHHHHHHHH
Confidence            5679999997 8999999999999999 787775432  222222    2334322 1  2322211 1222222221  


Q ss_pred             CCCccEEEEccCCh--------------------------HhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          256 NGGVDRSVECTGNI--------------------------DNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       256 ~~~~d~vid~~g~~--------------------------~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      -+++|+++.+.|..                          ..+..+...+..+ |+++.++...
T Consensus       126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~~  188 (294)
T PRK07985        126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSIQ  188 (294)
T ss_pred             hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCch
Confidence            13789999987631                          1223444555665 8898887643

>TIGR00477 tehB tellurite resistance protein TehB

Probab=95.37  E-value=0.068  Score=45.72  Aligned_cols=98  Identities=15%  Similarity=0.132  Sum_probs=58.8

Q ss_pred             hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCceeecCCCCCccHHHHHHHHcCC
Q 017336          182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNG  257 (373)
Q Consensus       182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l----g~~~vi~~~~~~~~~~~~~~~~~~~  257 (373)
                      +.....++.+||-+|+|. |..++.+++ .|. .|++++.+++..+.+++.    +...  .....+  +.. . . ..+
T Consensus        24 ~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~v--~~~~~d--~~~-~-~-~~~   93 (195)
T TIGR00477        24 EAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLPL--RTDAYD--INA-A-A-LNE   93 (195)
T ss_pred             HHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCCc--eeEecc--chh-c-c-ccC
Confidence            334444567899998864 666666665 477 899999998877766442    3321  111011  100 0 1 123


Q ss_pred             CccEEEEccC-----C---hHhHHHHHHHhhcCCcEEEEEc
Q 017336          258 GVDRSVECTG-----N---IDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       258 ~~d~vid~~g-----~---~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      .+|+|+...-     .   ...+..+.+.|+++ |.++.+.
T Consensus        94 ~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~  133 (195)
T TIGR00477        94 DYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA  133 (195)
T ss_pred             CCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence            6999986521     1   24677888999997 9855543

Part of a tellurite-reducing operon tehA and tehB

>PRK06197 short chain dehydrogenase; Provisional

Probab=95.37  E-value=0.1  Score=47.87  Aligned_cols=39  Identities=21%  Similarity=0.272  Sum_probs=32.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE  227 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~  227 (373)
                      .+++|||+|+ |++|..+++.+...|+ +|+.+.++.++.+
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~   54 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGK   54 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Confidence            5689999987 8999999998888899 7888888876644

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.35  E-value=0.13  Score=45.78  Aligned_cols=35  Identities=34%  Similarity=0.457  Sum_probs=30.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      ...+|+|+|+|++|..++..+.+.|.+++..++.+
T Consensus        31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            34789999999999999999999999888888654

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=95.34  E-value=0.13  Score=45.82  Aligned_cols=79  Identities=22%  Similarity=0.337  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~  257 (373)
                      .++++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+    ++.+... .  .|..+.. .+.+.+.+..  -+
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~   87 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEE-AVAAAFARIDAEHG   87 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHHhcC
Confidence            5789999987 8999999988888899 899998887654433    2334321 1  2322211 1222222221  13


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|.+.|.
T Consensus        88 ~id~vi~~ag~   98 (256)
T PRK06124         88 RLDILVNNVGA   98 (256)
T ss_pred             CCCEEEECCCC
Confidence            78999998874

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=95.33  E-value=0.013  Score=47.82  Aligned_cols=94  Identities=21%  Similarity=0.229  Sum_probs=56.0

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCC----CccHHHHHHHHcCCCccEEEEccC
Q 017336          192 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH----DRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       192 vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~----~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      |+|+|+|++|.+.+..++..|. .|..+.+.+ +.+.+++-|........+.    .......  ....+.+|+||-|+=
T Consensus         1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK   76 (151)
T PF02558_consen    1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK   76 (151)
T ss_dssp             EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred             CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence            6899999999998888888998 899998877 7777776665321111000    0000000  112237999999986


Q ss_pred             ChHhHHHHHHHhhc----CCcEEEEEcC
Q 017336          268 NIDNMISAFECVHD----GWGVAVLVGV  291 (373)
Q Consensus       268 ~~~~~~~~~~~l~~----~~g~~v~~g~  291 (373)
                      +. ....+++.+++    + ..++.+..
T Consensus        77 a~-~~~~~l~~l~~~~~~~-t~iv~~qN  102 (151)
T PF02558_consen   77 AY-QLEQALQSLKPYLDPN-TTIVSLQN  102 (151)
T ss_dssp             GG-GHHHHHHHHCTGEETT-EEEEEESS
T ss_pred             cc-chHHHHHHHhhccCCC-cEEEEEeC
Confidence            63 33444444444    3 46666644

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK06398 aldose dehydrogenase; Validated

Probab=95.33  E-value=0.059  Score=48.20  Aligned_cols=74  Identities=20%  Similarity=0.277  Sum_probs=47.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-eecCCCCCccHHHHHHHHc--CCCccEEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMT--NGGVDRSV  263 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~-vi~~~~~~~~~~~~~~~~~--~~~~d~vi  263 (373)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++..     .... ..|..+.+ .+.+.+.+..  -+++|++|
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~~~-~i~~~~~~~~~~~~~id~li   77 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSNKE-QVIKGIDYVISKYGRIDILV   77 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence            4689999997 8999999999999999 8988887765422     1111 12332221 1223333222  13699999


Q ss_pred             EccCC
Q 017336          264 ECTGN  268 (373)
Q Consensus       264 d~~g~  268 (373)
                      ++.|.
T Consensus        78 ~~Ag~   82 (258)
T PRK06398         78 NNAGI   82 (258)
T ss_pred             ECCCC
Confidence            98873

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.32  E-value=0.11  Score=47.12  Aligned_cols=95  Identities=22%  Similarity=0.240  Sum_probs=65.7

Q ss_pred             hcccchhhhhhhhhhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCc
Q 017336          168 ILSCGVSTGLGATLNVAKP-ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR  245 (373)
Q Consensus       168 ~~~~~~~ta~~~l~~~~~~-~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~  245 (373)
                      .+||+....+. +++.-++ -.|++|.|+|. +.+|.-.+.++...|+ .|+++.+...                   + 
T Consensus       138 ~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~-------------------~-  195 (301)
T PRK14194        138 LTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST-------------------D-  195 (301)
T ss_pred             CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC-------------------C-
Confidence            34555444444 3333343 46999999998 5999999999999999 8888854321                   1 


Q ss_pred             cHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       246 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                       ..    +.+. ..|+|+-++|.+..+...+  ++++ ..++.+|...
T Consensus       196 -l~----e~~~-~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin~  234 (301)
T PRK14194        196 -AK----ALCR-QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGINR  234 (301)
T ss_pred             -HH----HHHh-cCCEEEEecCChhcccHhh--ccCC-cEEEEecccc
Confidence             21    2221 4799999999987776554  8886 8888888643

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.31  E-value=0.13  Score=45.66  Aligned_cols=79  Identities=22%  Similarity=0.356  Sum_probs=49.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh--HHHHHHhcCCce-e--ecCCCCCccHHHHHHHHc--CCCc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGV  259 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~--~~~~~~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~~  259 (373)
                      .++++||+|+ +++|.++++.+...|+ +|+.+++++.  ..+.+++.+.+. .  .|..+.+ ++.+.+.+..  -+++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~i   84 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQQK-DIDSIVSQAVEVMGHI   84 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHH-HHHHHHHHHHHHcCCC
Confidence            4789999987 8999999999999999 7888876542  223344455432 1  2332221 1222232221  1379


Q ss_pred             cEEEEccCC
Q 017336          260 DRSVECTGN  268 (373)
Q Consensus       260 d~vid~~g~  268 (373)
                      |+++++.|.
T Consensus        85 D~lv~~ag~   93 (251)
T PRK12481         85 DILINNAGI   93 (251)
T ss_pred             CEEEECCCc
Confidence            999998873

>PRK07904 short chain dehydrogenase; Provisional

Probab=95.31  E-value=0.16  Score=45.29  Aligned_cols=81  Identities=20%  Similarity=0.254  Sum_probs=48.9

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHc-CCcEEEEEcCChhH-HHH----HHhcCC-c-ee--ecCCCCCccHHHHHHHH
Q 017336          186 PERGSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKR-FEE----AKKFGV-T-DF--VNTSEHDRPIQEVIAEM  254 (373)
Q Consensus       186 ~~~~~~vlI~G~-g~~G~~ai~la~~~-g~~~V~~~~~~~~~-~~~----~~~lg~-~-~v--i~~~~~~~~~~~~~~~~  254 (373)
                      +..+++|||+|+ |++|.+.++.+... |+ +|+.++++.++ .+.    +++.+. . .+  .|..+.+ ...+.+.+.
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~-~~~~~~~~~   82 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTD-SHPKVIDAA   82 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChH-HHHHHHHHH
Confidence            456789999998 89999988876666 57 88888887654 332    333332 1 12  2332221 122223332


Q ss_pred             cC-CCccEEEEccCC
Q 017336          255 TN-GGVDRSVECTGN  268 (373)
Q Consensus       255 ~~-~~~d~vid~~g~  268 (373)
                      .. ++.|+++.+.|.
T Consensus        83 ~~~g~id~li~~ag~   97 (253)
T PRK07904         83 FAGGDVDVAIVAFGL   97 (253)
T ss_pred             HhcCCCCEEEEeeec
Confidence            22 479999987764

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=95.31  E-value=0.27  Score=41.62  Aligned_cols=99  Identities=17%  Similarity=0.190  Sum_probs=62.9

Q ss_pred             hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcCC
Q 017336          182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG  257 (373)
Q Consensus       182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~~  257 (373)
                      ....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++    ++...+-... .+  ..    ....+
T Consensus        25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~-~d--~~----~~~~~   96 (187)
T PRK08287         25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIP-GE--AP----IELPG   96 (187)
T ss_pred             HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEe-cC--ch----hhcCc
Confidence            445667888988888865 6666677776543389999999987777653    4433221111 11  10    11123


Q ss_pred             CccEEEEccC---ChHhHHHHHHHhhcCCcEEEEE
Q 017336          258 GVDRSVECTG---NIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       258 ~~d~vid~~g---~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      .+|+|+....   -...+..+.+.|+++ |+++..
T Consensus        97 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~  130 (187)
T PRK08287         97 KADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLT  130 (187)
T ss_pred             CCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEE
Confidence            7999986432   124677889999997 998764

>PRK08251 short chain dehydrogenase; Provisional

Probab=95.31  E-value=0.12  Score=45.67  Aligned_cols=77  Identities=27%  Similarity=0.447  Sum_probs=48.7

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----c--CCce-e--ecCCCCCccHHHHHHHHc--C
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F--GVTD-F--VNTSEHDRPIQEVIAEMT--N  256 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----l--g~~~-v--i~~~~~~~~~~~~~~~~~--~  256 (373)
                      ++++||+|+ |++|...+..+...|+ +|+.+++++++.+.+.+    .  +... +  .|..+.. .+.+.+.+..  -
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~   79 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHD-QVFEVFAEFRDEL   79 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            578999987 8999998888888898 88888888776554432    1  2211 1  2333221 2333333222  1


Q ss_pred             CCccEEEEccC
Q 017336          257 GGVDRSVECTG  267 (373)
Q Consensus       257 ~~~d~vid~~g  267 (373)
                      ++.|++|.+.|
T Consensus        80 ~~id~vi~~ag   90 (248)
T PRK08251         80 GGLDRVIVNAG   90 (248)
T ss_pred             CCCCEEEECCC
Confidence            37999999886

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=95.29  E-value=0.11  Score=46.86  Aligned_cols=78  Identities=21%  Similarity=0.313  Sum_probs=49.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIAEMT--NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~  257 (373)
                      .+++++|+|+ |.+|.+.+..+...|+ +|+++++++++.+.+.    +.+... .  .|..+.. .+...+.+..  -+
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~g   86 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKE-SLEQARQQILEDFG   86 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHcC
Confidence            4688999987 8999999999989999 7988888776544332    223321 1  2222211 1222222221  13


Q ss_pred             CccEEEEccC
Q 017336          258 GVDRSVECTG  267 (373)
Q Consensus       258 ~~d~vid~~g  267 (373)
                      ++|++|++.|
T Consensus        87 ~id~li~~ag   96 (278)
T PRK08277         87 PCDILINGAG   96 (278)
T ss_pred             CCCEEEECCC
Confidence            7999999987

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=95.28  E-value=0.13  Score=45.75  Aligned_cols=79  Identities=24%  Similarity=0.365  Sum_probs=49.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~  257 (373)
                      .++++||+|+ |.+|..++..+...|+ +|+.+++++++.+.+    +..+... .  .|..+.+ .+.+.+.+..  -+
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~   85 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQ-EVEAAIEHIEKDIG   85 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHH-HHHHHHHHHHHhcC
Confidence            4688999987 8999999999988999 899998887664433    2223222 1  2222211 1222222211  13


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|+++.+.|.
T Consensus        86 ~id~vi~~ag~   96 (254)
T PRK08085         86 PIDVLINNAGI   96 (254)
T ss_pred             CCCEEEECCCc
Confidence            69999999874

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=95.28  E-value=0.21  Score=43.26  Aligned_cols=100  Identities=22%  Similarity=0.254  Sum_probs=62.8

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcC
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~  256 (373)
                      .....++++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++    ++...+- ....+  ..+..  ...
T Consensus        71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~-~~~~d--~~~~~--~~~  142 (212)
T PRK00312         71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVS-VRHGD--GWKGW--PAY  142 (212)
T ss_pred             HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceE-EEECC--cccCC--CcC
Confidence            4557788999999998864 44555556554 3 79999998877665543    4443221 11111  00000  011


Q ss_pred             CCccEEEEccCChHhHHHHHHHhhcCCcEEEEE
Q 017336          257 GGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       257 ~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      +.||+|+.............+.|+++ |+++..
T Consensus       143 ~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~  174 (212)
T PRK00312        143 APFDRILVTAAAPEIPRALLEQLKEG-GILVAP  174 (212)
T ss_pred             CCcCEEEEccCchhhhHHHHHhcCCC-cEEEEE
Confidence            37999887665556677888999997 988764

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=95.27  E-value=0.16  Score=44.17  Aligned_cols=95  Identities=24%  Similarity=0.276  Sum_probs=62.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce--eecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~--vi~~~~~~~~~~~~~~~~~~~~~d~vid  264 (373)
                      -++.+||=+|+|+ |.++.-+| ++|+ .|++++-+++..+.++.-....  -++|...   ..+.+... ++.||+|++
T Consensus        58 l~g~~vLDvGCGg-G~Lse~mA-r~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~---~~edl~~~-~~~FDvV~c  130 (243)
T COG2227          58 LPGLRVLDVGCGG-GILSEPLA-RLGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQA---TVEDLASA-GGQFDVVTC  130 (243)
T ss_pred             CCCCeEEEecCCc-cHhhHHHH-HCCC-eeEEecCChHHHHHHHHhhhhccccccchhh---hHHHHHhc-CCCccEEEE
Confidence            4788999999864 55555544 4578 8999999999998887432221  1445433   22333222 148999987


Q ss_pred             -----ccCCh-HhHHHHHHHhhcCCcEEEEE
Q 017336          265 -----CTGNI-DNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       265 -----~~g~~-~~~~~~~~~l~~~~g~~v~~  289 (373)
                           .+..+ .++..+.+.++|+ |.+++-
T Consensus       131 mEVlEHv~dp~~~~~~c~~lvkP~-G~lf~S  160 (243)
T COG2227         131 MEVLEHVPDPESFLRACAKLVKPG-GILFLS  160 (243)
T ss_pred             hhHHHccCCHHHHHHHHHHHcCCC-cEEEEe
Confidence                 34444 3567899999997 877653

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.26  E-value=0.23  Score=43.63  Aligned_cols=34  Identities=35%  Similarity=0.416  Sum_probs=30.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      ..+|+|+|+|++|..++..+.+.|..+++.++.+
T Consensus        21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D   54 (228)
T cd00757          21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDD   54 (228)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            5789999999999999999999999888888543

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.25  E-value=0.18  Score=43.23  Aligned_cols=35  Identities=34%  Similarity=0.467  Sum_probs=31.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      ...+|+|+|+|++|..+++.+.+.|..+++.++.+
T Consensus        20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            34789999999999999999999999889999877

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK09186 flagellin modification protein A; Provisional

Probab=95.25  E-value=0.12  Score=45.97  Aligned_cols=78  Identities=19%  Similarity=0.437  Sum_probs=49.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-Hhc----CCce----eecCCCCCccHHHHHHHHcC-
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF----GVTD----FVNTSEHDRPIQEVIAEMTN-  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~l----g~~~----vi~~~~~~~~~~~~~~~~~~-  256 (373)
                      .++++||+|+ |.+|...+..+...|+ +|+.+.+++++.+.+ +++    +...    ..|..+.+ .+.+.+.+... 
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~   80 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQE-SLEEFLSKSAEK   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHH-HHHHHHHHHHHH
Confidence            4689999997 8999999999999999 788888887665433 222    2221    12333221 12232332211 


Q ss_pred             -CCccEEEEccC
Q 017336          257 -GGVDRSVECTG  267 (373)
Q Consensus       257 -~~~d~vid~~g  267 (373)
                       +++|++|++.+
T Consensus        81 ~~~id~vi~~A~   92 (256)
T PRK09186         81 YGKIDGAVNCAY   92 (256)
T ss_pred             cCCccEEEECCc
Confidence             36899999875

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=95.25  E-value=0.13  Score=45.30  Aligned_cols=79  Identities=22%  Similarity=0.226  Sum_probs=48.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHH----HHhcCCce-ee--cCCCCCccHHHHHHHHc--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTD-FV--NTSEHDRPIQEVIAEMT--NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~----~~~lg~~~-vi--~~~~~~~~~~~~~~~~~--~~  257 (373)
                      .+++|||+|+ |.+|...+..+...|+ +|++++++.++...    +++.+... ++  |..+. ..+.+.+.+..  .+
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~   82 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDR-AALKAAVAAGVEDFG   82 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHhC
Confidence            4678999997 8999999988888898 89999888654332    22333221 22  22211 11222222221  13


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      .+|++|.+.|.
T Consensus        83 ~~d~vi~~ag~   93 (251)
T PRK12826         83 RLDILVANAGI   93 (251)
T ss_pred             CCCEEEECCCC
Confidence            68999998764

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.24  E-value=0.13  Score=46.12  Aligned_cols=78  Identities=17%  Similarity=0.245  Sum_probs=46.7

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCcee--ecCCCCCccHHHHHHHHcC--
Q 017336          188 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDF--VNTSEHDRPIQEVIAEMTN--  256 (373)
Q Consensus       188 ~~~~vlI~G~-g--~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~v--i~~~~~~~~~~~~~~~~~~--  256 (373)
                      .++++||+|+ +  ++|.++++.+...|+ +|+.+.++++..+.++    ++|....  .|..+.+ ...+.+.+...  
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~-~v~~~~~~~~~~~   84 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPK-SISNLFDDIKEKW   84 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHH-HHHHHHHHHHHHc
Confidence            4688999987 4  799998888888899 7888777643222232    2343322  2333221 12222222221  


Q ss_pred             CCccEEEEccC
Q 017336          257 GGVDRSVECTG  267 (373)
Q Consensus       257 ~~~d~vid~~g  267 (373)
                      +++|+++++.|
T Consensus        85 g~iDilVnnag   95 (260)
T PRK06603         85 GSFDFLLHGMA   95 (260)
T ss_pred             CCccEEEEccc
Confidence            37999999876

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=95.24  E-value=0.12  Score=45.72  Aligned_cols=76  Identities=22%  Similarity=0.346  Sum_probs=49.5

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCce-e--ecCCCCCccHHHHHHHHcC--CCccEEE
Q 017336          191 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-F--VNTSEHDRPIQEVIAEMTN--GGVDRSV  263 (373)
Q Consensus       191 ~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~-v--i~~~~~~~~~~~~~~~~~~--~~~d~vi  263 (373)
                      +|+|+|+ |.+|.+.+..+...|+ +|+++++++++.+.+.+ ++... .  .|..+.+ .+.+.+.+...  ++.|.++
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~i~~~~~~~~~~~~~id~vi   79 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRA-AIEEMLASLPAEWRNIDVLV   79 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence            6899987 8999999999988999 89999998877665543 34322 1  2322211 12232332211  3699999


Q ss_pred             EccCC
Q 017336          264 ECTGN  268 (373)
Q Consensus       264 d~~g~  268 (373)
                      .+.|.
T Consensus        80 ~~ag~   84 (248)
T PRK10538         80 NNAGL   84 (248)
T ss_pred             ECCCc
Confidence            98874

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=95.23  E-value=0.13  Score=45.21  Aligned_cols=79  Identities=23%  Similarity=0.258  Sum_probs=49.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCce-e--ecCCCCCccHHHHHHHHc--CCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~~d  260 (373)
                      +++++||+|+ |.+|..++..+...|+ .|+...++.++.+.+ ..++... +  .|..+.+ .+.+.+.+..  -+++|
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id   82 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRD-EVKALGQKAEADLEGVD   82 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHH-HHHHHHHHHHHHcCCCC
Confidence            4679999997 8999999999888998 788887776665544 3344321 2  2222211 1222222211  13799


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      ++|.+.|.
T Consensus        83 ~vi~~ag~   90 (245)
T PRK12936         83 ILVNNAGI   90 (245)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=95.22  E-value=0.16  Score=45.26  Aligned_cols=39  Identities=21%  Similarity=0.248  Sum_probs=32.4

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHH
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE  228 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~  228 (373)
                      ++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~   41 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAAN   41 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHH
Confidence            578999987 8999999999888899 88888887765443

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.21  E-value=0.14  Score=46.50  Aligned_cols=94  Identities=18%  Similarity=0.245  Sum_probs=64.8

Q ss_pred             hcccchhhhhhhhhhccCC-CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEc-CChhHHHHHHhcCCceeecCCCCC
Q 017336          168 ILSCGVSTGLGATLNVAKP-ERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVD-RSSKRFEEAKKFGVTDFVNTSEHD  244 (373)
Q Consensus       168 ~~~~~~~ta~~~l~~~~~~-~~~~~vlI~G-~g~~G~~ai~la~~~g~~~V~~~~-~~~~~~~~~~~lg~~~vi~~~~~~  244 (373)
                      ..||+....+. +++.-++ -.|++|+|+| .+.+|.-++.++...|+ .|+++. ++..                    
T Consensus       137 ~~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~~--------------------  194 (296)
T PRK14188        137 LVPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTRD--------------------  194 (296)
T ss_pred             CcCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCCC--------------------
Confidence            34554444443 2333333 4799999999 58999999999999999 888883 3321                    


Q ss_pred             ccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          245 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       245 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                        +    .+.+. ..|+|+-++|.+..+...+  ++++ ..++.+|...
T Consensus       195 --l----~e~~~-~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin~  233 (296)
T PRK14188        195 --L----PAVCR-RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGINR  233 (296)
T ss_pred             --H----HHHHh-cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCcc
Confidence              1    11111 4799999999987766554  8886 8888888754

>PRK06101 short chain dehydrogenase; Provisional

Probab=95.20  E-value=0.18  Score=44.48  Aligned_cols=42  Identities=19%  Similarity=0.272  Sum_probs=35.0

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF  232 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l  232 (373)
                      +++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~   44 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQ   44 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHh
Confidence            57899987 8999998888888899 799999988887766553

>TIGR00417 speE spermidine synthase

Probab=95.19  E-value=0.28  Score=44.29  Aligned_cols=97  Identities=20%  Similarity=0.142  Sum_probs=60.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC-C-------ceeecCCCCCccHHHHHHHHcCCC
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-V-------TDFVNTSEHDRPIQEVIAEMTNGG  258 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg-~-------~~vi~~~~~~~~~~~~~~~~~~~~  258 (373)
                      +.+++||++|+|. |..+..+++.....++++++.+++-.+.++++- .       ..+ +....+  ..+.++. ..+.
T Consensus        71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v-~i~~~D--~~~~l~~-~~~~  145 (270)
T TIGR00417        71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRV-DLQIDD--GFKFLAD-TENT  145 (270)
T ss_pred             CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCce-EEEECc--hHHHHHh-CCCC
Confidence            3456999998865 445556666665568999999988777776631 0       111 000111  3333433 2348


Q ss_pred             ccEEEEccC----------ChHhHHHHHHHhhcCCcEEEEE
Q 017336          259 VDRSVECTG----------NIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       259 ~d~vid~~g----------~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      +|+|+--..          ..++++.+.+.|+++ |.++..
T Consensus       146 yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~  185 (270)
T TIGR00417       146 FDVIIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQ  185 (270)
T ss_pred             ccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEc
Confidence            999875332          235677889999997 999876

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=95.19  E-value=0.13  Score=45.98  Aligned_cols=76  Identities=26%  Similarity=0.381  Sum_probs=47.8

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCceee--cCCCCCccHHHHHHHHc--CCCccE
Q 017336          191 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFV--NTSEHDRPIQEVIAEMT--NGGVDR  261 (373)
Q Consensus       191 ~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~vi--~~~~~~~~~~~~~~~~~--~~~~d~  261 (373)
                      ++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    +.+-...+  |..+. ..+.+.+.+..  .+++|+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~-~~~~~~~~~~~~~~g~id~   79 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDK-DDLKNLVKEAWELLGGIDA   79 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCH-HHHHHHHHHHHHhcCCCCE
Confidence            6899987 8999999998888999 7999988876654432    22311222  22221 11222232221  137999


Q ss_pred             EEEccCC
Q 017336          262 SVECTGN  268 (373)
Q Consensus       262 vid~~g~  268 (373)
                      +|++.|.
T Consensus        80 li~naG~   86 (259)
T PRK08340         80 LVWNAGN   86 (259)
T ss_pred             EEECCCC
Confidence            9998874

>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating)

Probab=95.17  E-value=0.32  Score=44.09  Aligned_cols=90  Identities=19%  Similarity=0.197  Sum_probs=57.9

Q ss_pred             EEEEECCCHHHHHH-HHHHHHcCCcEEEEEcCChhH--HHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          191 SVAVFGLGAVGLAA-AEGARIAGASRIIGVDRSSKR--FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       191 ~vlI~G~g~~G~~a-i~la~~~g~~~V~~~~~~~~~--~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      +|.|+|+|.+|... ..+.+..+++-+.+++.++++  +++++++|......  +    +...+.   ...+|+||++++
T Consensus         3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~~--~----~e~ll~---~~dIDaV~iaTp   73 (285)
T TIGR03215         3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSAE--G----VDGLLA---NPDIDIVFDATS   73 (285)
T ss_pred             EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEEC--C----HHHHhc---CCCCCEEEECCC
Confidence            58899999999854 556655567334444555543  56777888754331  1    211121   127999999999


Q ss_pred             ChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          268 NIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       268 ~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ...+.+.+..++..  |+.++...
T Consensus        74 ~~~H~e~a~~al~a--Gk~VIdek   95 (285)
T TIGR03215        74 AKAHARHARLLAEL--GKIVIDLT   95 (285)
T ss_pred             cHHHHHHHHHHHHc--CCEEEECC
Confidence            97788888888777  55555443

Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=95.17  E-value=0.2  Score=43.87  Aligned_cols=73  Identities=26%  Similarity=0.412  Sum_probs=54.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh--cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK--FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~--lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      +++|+|+|-+|...++.+...|. .|++++.++++.+...+  +....+. -+..+   .+.++++--..+|+++-++|.
T Consensus         2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~~v~-gd~t~---~~~L~~agi~~aD~vva~t~~   76 (225)
T COG0569           2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTHVVI-GDATD---EDVLEEAGIDDADAVVAATGN   76 (225)
T ss_pred             EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceEEEE-ecCCC---HHHHHhcCCCcCCEEEEeeCC
Confidence            68899999999999999999998 89999999999777433  6654433 22222   234555533389999999988

>PRK07577 short chain dehydrogenase; Provisional

Probab=95.17  E-value=0.093  Score=45.89  Aligned_cols=74  Identities=23%  Similarity=0.284  Sum_probs=47.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-eecCCCCCccHHHHHHHHcCC-CccEEEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNG-GVDRSVE  264 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~-vi~~~~~~~~~~~~~~~~~~~-~~d~vid  264 (373)
                      .++++||+|+ |.+|...++.+...|+ +|+++.++.++     .+.... ..|..+.. .+.+.+.+.... +.|++|.
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~d~vi~   74 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLADIE-QTAATLAQINEIHPVDAIVN   74 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCCHH-HHHHHHHHHHHhCCCcEEEE
Confidence            3578999988 8999999999989998 89988887654     122211 12332221 122333333222 6899999


Q ss_pred             ccCC
Q 017336          265 CTGN  268 (373)
Q Consensus       265 ~~g~  268 (373)
                      +.|.
T Consensus        75 ~ag~   78 (234)
T PRK07577         75 NVGI   78 (234)
T ss_pred             CCCC
Confidence            8874

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.17  E-value=0.15  Score=46.11  Aligned_cols=103  Identities=15%  Similarity=0.230  Sum_probs=63.1

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCcEEEEEcCChh---HHHHH-HhcCCcee--ecCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSK---RFEEA-KKFGVTDF--VNTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~---g~~G~~ai~la~~~g~~~V~~~~~~~~---~~~~~-~~lg~~~v--i~~~~~~--~~~~~~~~~~~~  256 (373)
                      .++++||+|+   +++|+++++.+...|+ +|+.++++++   +.+.+ ++++....  .|..+.+  ..+.+.+.+.. 
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~-   81 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDL-   81 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHc-
Confidence            4689999986   4899999998888999 7888877743   22222 34453322  3333221  11222232222 


Q ss_pred             CCccEEEEccCCh--------------H---------------hHHHHHHHhhcCCcEEEEEcCCC
Q 017336          257 GGVDRSVECTGNI--------------D---------------NMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       257 ~~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +++|+++++.|..              +               .....+..|..+ |+++.++...
T Consensus        82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~~  146 (274)
T PRK08415         82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYLG  146 (274)
T ss_pred             CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecCC
Confidence            4799999998731              0               233455667775 8888887643

>PRK08328 hypothetical protein; Provisional

Probab=95.16  E-value=0.12  Score=45.38  Aligned_cols=34  Identities=35%  Similarity=0.488  Sum_probs=30.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      +.+|+|+|+|++|..++..+.+.|.++++.++.+
T Consensus        27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4789999999999999999999999999888744

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.14  E-value=0.13  Score=45.13  Aligned_cols=80  Identities=19%  Similarity=0.355  Sum_probs=49.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-eecCCCCC-ccHHHHHHHHcC--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  258 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-vi~~~~~~-~~~~~~~~~~~~--~~  258 (373)
                      .++++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+    +..+... ++..+-.+ ..+.+.+++...  ++
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999987 8999999988888999 899998887654433    2223221 12112111 112222332211  37


Q ss_pred             ccEEEEccCC
Q 017336          259 VDRSVECTGN  268 (373)
Q Consensus       259 ~d~vid~~g~  268 (373)
                      +|++|.+.|.
T Consensus        85 id~vi~~ag~   94 (239)
T PRK07666         85 IDILINNAGI   94 (239)
T ss_pred             ccEEEEcCcc
Confidence            8999998874

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.12  E-value=0.13  Score=45.85  Aligned_cols=79  Identities=27%  Similarity=0.278  Sum_probs=47.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHH---HHHhcCCce-e--ecCCCCCccHHHHHHHHc--CCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE---EAKKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGG  258 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~---~~~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~  258 (373)
                      .++++||+|+ |.+|.+.++.+...|+ +|+++.++++..+   .+.+.+... .  .|..+.+ .+.+.+.+..  .++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~g~   91 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPE-SAEKVVKEALEEFGK   91 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHcCC
Confidence            4689999998 8999999999999999 7888877632112   222334321 1  2322211 1222222221  136


Q ss_pred             ccEEEEccCC
Q 017336          259 VDRSVECTGN  268 (373)
Q Consensus       259 ~d~vid~~g~  268 (373)
                      +|++|.+.|.
T Consensus        92 id~li~~ag~  101 (258)
T PRK06935         92 IDILVNNAGT  101 (258)
T ss_pred             CCEEEECCCC
Confidence            8999998874

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.12  E-value=0.16  Score=42.57  Aligned_cols=33  Identities=24%  Similarity=0.240  Sum_probs=29.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      +|+|+|+|++|...++.+-+.|..++..++.+.
T Consensus         1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            489999999999999999999998899997764

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=95.11  E-value=0.17  Score=44.77  Aligned_cols=79  Identities=23%  Similarity=0.264  Sum_probs=49.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-eecCCCCCc-cHHHHHHHHc--CCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHDR-PIQEVIAEMT--NGG  258 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-vi~~~~~~~-~~~~~~~~~~--~~~  258 (373)
                      +++++||+|+ |.+|..+++.+...|+ +|+.++++.++...+.    +.+... ++..+-.+. .+.+.+.+..  .++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3688999997 8999999999999999 7888888776654432    223221 222221111 1222222221  136


Q ss_pred             ccEEEEccC
Q 017336          259 VDRSVECTG  267 (373)
Q Consensus       259 ~d~vid~~g  267 (373)
                      .|++|.+.|
T Consensus        81 ~d~vi~~ag   89 (250)
T TIGR03206        81 VDVLVNNAG   89 (250)
T ss_pred             CCEEEECCC
Confidence            899999987

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.11  E-value=0.22  Score=46.88  Aligned_cols=36  Identities=31%  Similarity=0.316  Sum_probs=31.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      ...+|||+|+|++|..+++.+-..|.+++..++.+.
T Consensus        27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            347899999999999999999999999999987653

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.10  E-value=0.5  Score=41.73  Aligned_cols=102  Identities=17%  Similarity=0.164  Sum_probs=59.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHH----HHHHhcCCce-e--ecCCCCC--ccHHHHHHHHcCC
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRF----EEAKKFGVTD-F--VNTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~-~~~~~----~~~~~lg~~~-v--i~~~~~~--~~~~~~~~~~~~~  257 (373)
                      ++++||+|+ |.+|...++.+...|+ +|+.+.+ +.++.    ..+++.+... .  .|..+.+  ....+.+.+.. +
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   83 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY-G   83 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc-C
Confidence            578999987 8999999988888999 6655543 32222    2233344322 2  2222211  01222232322 3


Q ss_pred             CccEEEEccCCh----------H---------------hHHHHHHHhhcCCcEEEEEcCCC
Q 017336          258 GVDRSVECTGNI----------D---------------NMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       258 ~~d~vid~~g~~----------~---------------~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      ++|++|.+.|..          +               ..+.+.+.++.. |+++.++...
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~  143 (252)
T PRK06077         84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA  143 (252)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence            789999998731          0               133445566675 8999988754

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.08  E-value=0.13  Score=48.82  Aligned_cols=35  Identities=29%  Similarity=0.284  Sum_probs=32.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      .+.+|+|+|+|++|..++..+...|.++++.++.+
T Consensus       134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            56789999999999999999999999999999876

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.08  E-value=0.21  Score=42.75  Aligned_cols=34  Identities=18%  Similarity=0.362  Sum_probs=30.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      ..+|+|+|+|++|.-++..+-..|.+++..++.+
T Consensus        21 ~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          21 SARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             hCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence            5789999999999999999999999889888654

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=95.08  E-value=0.13  Score=45.49  Aligned_cols=78  Identities=29%  Similarity=0.389  Sum_probs=49.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-e--ecCCCCCccHHHHHHHHc--CCC
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMT--NGG  258 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~  258 (373)
                      ++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+    .+... .  .|..+. ..+.+.+.+..  -++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKE-DEIADMIAAAAAEFGG   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHhcCC
Confidence            367999997 8999999999888999 89999888776655433    23221 1  222221 11222222221  126


Q ss_pred             ccEEEEccCC
Q 017336          259 VDRSVECTGN  268 (373)
Q Consensus       259 ~d~vid~~g~  268 (373)
                      .|++|.+.+.
T Consensus        79 ~d~vi~~a~~   88 (255)
T TIGR01963        79 LDILVNNAGI   88 (255)
T ss_pred             CCEEEECCCC
Confidence            8999988764

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=95.07  E-value=0.23  Score=39.14  Aligned_cols=93  Identities=18%  Similarity=0.283  Sum_probs=57.7

Q ss_pred             EEEECC-CHHHHHHHHHHHHcC--CcEEEEEcCChh---HHHHHHhcCCceeecCCCCCcc-H----------------H
Q 017336          192 VAVFGL-GAVGLAAAEGARIAG--ASRIIGVDRSSK---RFEEAKKFGVTDFVNTSEHDRP-I----------------Q  248 (373)
Q Consensus       192 vlI~G~-g~~G~~ai~la~~~g--~~~V~~~~~~~~---~~~~~~~lg~~~vi~~~~~~~~-~----------------~  248 (373)
                      |.|+|+ |.+|..++.+.++..  + +|++......   =.+.+++|.+..+...++.... +                .
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~   79 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP   79 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence            578898 999999999999887  6 6776654432   2344567888776554432100 1                1


Q ss_pred             HHHHHHcC-CCccEEEEccCChHhHHHHHHHhhcCCcEE
Q 017336          249 EVIAEMTN-GGVDRSVECTGNIDNMISAFECVHDGWGVA  286 (373)
Q Consensus       249 ~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~g~~  286 (373)
                      +.+.+... ..+|+|+.+..+-..+.-.+.++..+ -++
T Consensus        80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g-k~i  117 (129)
T PF02670_consen   80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG-KDI  117 (129)
T ss_dssp             HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT-SEE
T ss_pred             HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC-CeE
Confidence            12223333 37899999877767888888888874 444

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=95.02  E-value=0.29  Score=43.24  Aligned_cols=74  Identities=26%  Similarity=0.336  Sum_probs=46.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-e--ecCCCCCccHHHHHHHHc--CCCccE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGVDR  261 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~~d~  261 (373)
                      +++++||+|+ |.+|...+..+...|+ +|++++++.     .+..+... .  .|..+.+ .+.+.+.+..  .+++|+
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~   79 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDAA-AVAQVCQRLLAETGPLDV   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCHH-HHHHHHHHHHHHcCCCCE
Confidence            4689999987 8999999998888999 888887765     22222211 1  2222211 1222232221  136899


Q ss_pred             EEEccCC
Q 017336          262 SVECTGN  268 (373)
Q Consensus       262 vid~~g~  268 (373)
                      +|.+.|.
T Consensus        80 vi~~ag~   86 (252)
T PRK08220         80 LVNAAGI   86 (252)
T ss_pred             EEECCCc
Confidence            9999874

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=95.00  E-value=0.35  Score=43.22  Aligned_cols=96  Identities=23%  Similarity=0.234  Sum_probs=67.4

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHc-CCC
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT-NGG  258 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~-~~~  258 (373)
                      .......++++||=+|+|. |..+..+++.. +. +|++++.++...+.+++.+++.+.    .+  .    .+.. .+.
T Consensus        22 l~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~----~d--~----~~~~~~~~   89 (255)
T PRK14103         22 LARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART----GD--V----RDWKPKPD   89 (255)
T ss_pred             HHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE----cC--h----hhCCCCCC
Confidence            4445667889999999876 66777788775 55 899999999998888876654322    11  1    1111 237


Q ss_pred             ccEEEEccC-----C-hHhHHHHHHHhhcCCcEEEEE
Q 017336          259 VDRSVECTG-----N-IDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       259 ~d~vid~~g-----~-~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      ||+|+....     . ...+..+.+.|+|+ |++++.
T Consensus        90 fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~  125 (255)
T PRK14103         90 TDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ  125 (255)
T ss_pred             ceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence            999998543     2 24677889999997 998765

>PRK07102 short chain dehydrogenase; Provisional

Probab=94.97  E-value=0.22  Score=43.90  Aligned_cols=38  Identities=26%  Similarity=0.386  Sum_probs=32.5

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHH
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE  228 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~  228 (373)
                      ++++|+|+ |.+|...++.+...|+ +|+++++++++.+.
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~   40 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLER   40 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHH
Confidence            57999987 8999999999988898 89999988876544

>PLN00203 glutamyl-tRNA reductase

Probab=94.96  E-value=0.13  Score=50.79  Aligned_cols=82  Identities=18%  Similarity=0.297  Sum_probs=55.8

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcC-Cce-eecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFG-VTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg-~~~-vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      +++|+|+|+|.+|.+++..+...|+.+|+++.++.++.+.+. +++ ... +..       + +.+.+.. ...|+||.|
T Consensus       266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~-------~-~dl~~al-~~aDVVIsA  336 (519)
T PLN00203        266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKP-------L-DEMLACA-AEADVVFTS  336 (519)
T ss_pred             CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeec-------H-hhHHHHH-hcCCEEEEc
Confidence            689999999999999999999999878999999988866654 453 221 111       1 1122222 268999999


Q ss_pred             cCChHh--HHHHHHHh
Q 017336          266 TGNIDN--MISAFECV  279 (373)
Q Consensus       266 ~g~~~~--~~~~~~~l  279 (373)
                      ++.+..  ....++.+
T Consensus       337 T~s~~pvI~~e~l~~~  352 (519)
T PLN00203        337 TSSETPLFLKEHVEAL  352 (519)
T ss_pred             cCCCCCeeCHHHHHHh
Confidence            876532  33444444

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=94.95  E-value=0.19  Score=45.33  Aligned_cols=89  Identities=19%  Similarity=0.227  Sum_probs=63.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhH-HHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~-~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      +|.++|-|.+|.-.++=+...|+ .|.+.++++++ .+++++.|+...-.       ..+..     ...|+||-++++.
T Consensus         2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~~a~s-------~~eaa-----~~aDvVitmv~~~   68 (286)
T COG2084           2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGATVAAS-------PAEAA-----AEADVVITMLPDD   68 (286)
T ss_pred             eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCcccCC-------HHHHH-----HhCCEEEEecCCH
Confidence            57889999999999999999998 89999999999 88888888864211       11111     1468888888776


Q ss_pred             HhHHHHH-------HHhhcCCcEEEEEcCCC
Q 017336          270 DNMISAF-------ECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       270 ~~~~~~~-------~~l~~~~g~~v~~g~~~  293 (373)
                      +.....+       ..++++ ..+|.+...+
T Consensus        69 ~~V~~V~~g~~g~~~~~~~G-~i~IDmSTis   98 (286)
T COG2084          69 AAVRAVLFGENGLLEGLKPG-AIVIDMSTIS   98 (286)
T ss_pred             HHHHHHHhCccchhhcCCCC-CEEEECCCCC
Confidence            6555444       233454 6666665543

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.95  E-value=0.16  Score=45.76  Aligned_cols=94  Identities=18%  Similarity=0.228  Sum_probs=64.7

Q ss_pred             cccchhhhhhhhhhccCC-CCCCEEEEECCC-HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCcc
Q 017336          169 LSCGVSTGLGATLNVAKP-ERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP  246 (373)
Q Consensus       169 ~~~~~~ta~~~l~~~~~~-~~~~~vlI~G~g-~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~  246 (373)
                      .||+....+.. ++..++ -.|++|+|+|-| .+|.-..+++...|+ .|+++.+..                   .+  
T Consensus       139 ~PcTp~av~~l-l~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~a-tVtv~hs~T-------------------~~--  195 (285)
T PRK10792        139 RPCTPRGIMTL-LERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGC-TVTVCHRFT-------------------KN--  195 (285)
T ss_pred             CCCCHHHHHHH-HHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCC-eEEEEECCC-------------------CC--
Confidence            45544444443 333443 369999999985 699999999999999 888874321                   11  


Q ss_pred             HHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          247 IQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       247 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +    ++.+. .+|+++.++|.+.++..  +.++++ ..++.+|...
T Consensus       196 l----~~~~~-~ADIvi~avG~p~~v~~--~~vk~g-avVIDvGin~  234 (285)
T PRK10792        196 L----RHHVR-NADLLVVAVGKPGFIPG--EWIKPG-AIVIDVGINR  234 (285)
T ss_pred             H----HHHHh-hCCEEEEcCCCcccccH--HHcCCC-cEEEEccccc
Confidence            2    22222 58999999999776553  788997 8888888543

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=94.94  E-value=0.18  Score=44.87  Aligned_cols=79  Identities=22%  Similarity=0.262  Sum_probs=48.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh--HHHHHHhcCCce-eecCCCCC-ccHHH---HHHHHcCCCc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTD-FVNTSEHD-RPIQE---VIAEMTNGGV  259 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~--~~~~~~~lg~~~-vi~~~~~~-~~~~~---~~~~~~~~~~  259 (373)
                      .++++||+|+ |.+|.++++.+...|+ +|+.++++..  ..+.+++.+... .+..+-.+ ....+   .+.+.. +++
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~~   86 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEF-GHI   86 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh-CCC
Confidence            3689999987 8999999999999999 7887765432  223344444322 12111111 11222   222222 379


Q ss_pred             cEEEEccCC
Q 017336          260 DRSVECTGN  268 (373)
Q Consensus       260 d~vid~~g~  268 (373)
                      |++|++.|.
T Consensus        87 D~li~~Ag~   95 (253)
T PRK08993         87 DILVNNAGL   95 (253)
T ss_pred             CEEEECCCC
Confidence            999999874

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=94.94  E-value=0.98  Score=33.34  Aligned_cols=84  Identities=20%  Similarity=0.337  Sum_probs=52.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcC---CcEEE-EEcCChhHHHHH-HhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          191 SVAVFGLGAVGLAAAEGARIAG---ASRII-GVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g---~~~V~-~~~~~~~~~~~~-~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      +|.|+|+|.+|.+.+.-+...|   . +|+ +.++++++.+.+ ++++......  +    ..+.++     ..|+||-|
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~~--~----~~~~~~-----~advvila   68 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATAD--D----NEEAAQ-----EADVVILA   68 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEESE--E----HHHHHH-----HTSEEEE-
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhccccccC--C----hHHhhc-----cCCEEEEE
Confidence            4778899999999999888888   5 677 448998887776 5566543221  1    223332     36999999


Q ss_pred             cCChHhHHHHHHH---hhcCCcEEEE
Q 017336          266 TGNIDNMISAFEC---VHDGWGVAVL  288 (373)
Q Consensus       266 ~g~~~~~~~~~~~---l~~~~g~~v~  288 (373)
                      +... .+...++.   +.++ ..++.
T Consensus        69 v~p~-~~~~v~~~i~~~~~~-~~vis   92 (96)
T PF03807_consen   69 VKPQ-QLPEVLSEIPHLLKG-KLVIS   92 (96)
T ss_dssp             S-GG-GHHHHHHHHHHHHTT-SEEEE
T ss_pred             ECHH-HHHHHHHHHhhccCC-CEEEE
Confidence            9764 33333333   4443 44443

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=94.92  E-value=0.22  Score=50.05  Aligned_cols=75  Identities=17%  Similarity=0.240  Sum_probs=56.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      ++++|+|.|.+|+..++.++..|. .+++++.++++.+.+++.|...+.-. ..+   .+.+++.--+.+|.++-++++.
T Consensus       418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD-~~~---~~~L~~a~i~~a~~viv~~~~~  492 (558)
T PRK10669        418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGN-AAN---EEIMQLAHLDCARWLLLTIPNG  492 (558)
T ss_pred             CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcC-CCC---HHHHHhcCccccCEEEEEcCCh
Confidence            679999999999999999999998 89999999999999999887655422 111   1234443223789888777663

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=94.92  E-value=0.18  Score=45.18  Aligned_cols=78  Identities=23%  Similarity=0.338  Sum_probs=49.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-e--ecCCCCCccHHHH---HHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEV---IAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-v--i~~~~~~~~~~~~---~~~~~~  256 (373)
                      .++++||+|+ +.+|..++..+...|+ +|+.+.+++++.+.+.    +.+... .  .|..+.. ...+.   +.+.. 
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~-   85 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDED-GVQAMVSQIEKEV-   85 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHhC-
Confidence            5688999987 8999998888888899 7888888876654432    334332 1  2222211 12222   22222 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|++.|.
T Consensus        86 ~~id~li~~ag~   97 (265)
T PRK07097         86 GVIDILVNNAGI   97 (265)
T ss_pred             CCCCEEEECCCC
Confidence            368999999874

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.90  E-value=0.18  Score=45.10  Aligned_cols=79  Identities=18%  Similarity=0.248  Sum_probs=47.2

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCcee--ecCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~---g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~v--i~~~~~~--~~~~~~~~~~~~  256 (373)
                      +++++||+|+   +++|.+.++.+...|+ +|+.+.+.++..+.+++    .+....  .|..+.+  ..+.+.+.+.. 
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   82 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW-   82 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh-
Confidence            4689999984   4899999988888999 78877665433333333    232222  2322211  11222333322 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|+++++.|.
T Consensus        83 g~iD~lVnnAG~   94 (261)
T PRK08690         83 DGLDGLVHSIGF   94 (261)
T ss_pred             CCCcEEEECCcc
Confidence            379999999864

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=94.90  E-value=0.49  Score=40.63  Aligned_cols=97  Identities=21%  Similarity=0.200  Sum_probs=63.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHc-CCCccEE
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-NGGVDRS  262 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~-~~~~d~v  262 (373)
                      ++.+||-+|+|. |..+..+++.....+|++++.+++..+.+++    .+...+- ....+  +.+.+.... .+.+|.|
T Consensus        40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~-~~~~d--~~~~l~~~~~~~~~D~V  115 (202)
T PRK00121         40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLR-LLCGD--AVEVLLDMFPDGSLDRI  115 (202)
T ss_pred             CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEE-EEecC--HHHHHHHHcCccccceE
Confidence            567888888876 7777777877643489999999988887754    2333221 11112  322233222 3378998


Q ss_pred             EEccC--------------ChHhHHHHHHHhhcCCcEEEEE
Q 017336          263 VECTG--------------NIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       263 id~~g--------------~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      +-...              ...++..+.+.|+++ |.+++.
T Consensus       116 ~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~  155 (202)
T PRK00121        116 YLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFA  155 (202)
T ss_pred             EEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEE
Confidence            86432              235688999999997 999875

>PRK07340 ornithine cyclodeaminase; Validated

Probab=94.89  E-value=0.13  Score=47.24  Aligned_cols=93  Identities=17%  Similarity=0.105  Sum_probs=63.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHH-HcCCcEEEEEcCChhHHHHH-HhcC---CceeecCCCCCccHHHHHHHHcCCCccE
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGAR-IAGASRIIGVDRSSKRFEEA-KKFG---VTDFVNTSEHDRPIQEVIAEMTNGGVDR  261 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~-~~g~~~V~~~~~~~~~~~~~-~~lg---~~~vi~~~~~~~~~~~~~~~~~~~~~d~  261 (373)
                      ...++++|+|+|..|.+.+..+. ..+.++|.+.+++.++.+.+ +++.   ....  .  .+  +.+.+     .++|+
T Consensus       123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~--~--~~--~~~av-----~~aDi  191 (304)
T PRK07340        123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE--P--LD--GEAIP-----EAVDL  191 (304)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE--E--CC--HHHHh-----hcCCE
Confidence            45678999999999999888876 46877899999998775544 3343   2211  1  11  32223     26899


Q ss_pred             EEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          262 SVECTGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       262 vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      |+.|+.++..+-..  .++++ -.+..+|...
T Consensus       192 VitaT~s~~Pl~~~--~~~~g-~hi~~iGs~~  220 (304)
T PRK07340        192 VVTATTSRTPVYPE--AARAG-RLVVAVGAFT  220 (304)
T ss_pred             EEEccCCCCceeCc--cCCCC-CEEEecCCCC
Confidence            99998876543333  37886 8888888765

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=94.89  E-value=0.19  Score=42.36  Aligned_cols=93  Identities=13%  Similarity=0.150  Sum_probs=56.8

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCceeecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid  264 (373)
                      +++||=+|+|. |..++.+++.....+|++++.+++..+.++    +.+.+.+ .....+  ..+ +  ...+.+|+|+.
T Consensus        43 ~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i-~~i~~d--~~~-~--~~~~~fD~I~s  115 (181)
T TIGR00138        43 GKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNV-EIVNGR--AED-F--QHEEQFDVITS  115 (181)
T ss_pred             CCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCe-EEEecc--hhh-c--cccCCccEEEe
Confidence            78888888754 455555565553348999999987666554    3454332 111111  211 1  11237999886


Q ss_pred             cc-C-ChHhHHHHHHHhhcCCcEEEEE
Q 017336          265 CT-G-NIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       265 ~~-g-~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      .. . -+..++.+.+.|+++ |+++..
T Consensus       116 ~~~~~~~~~~~~~~~~Lkpg-G~lvi~  141 (181)
T TIGR00138       116 RALASLNVLLELTLNLLKVG-GYFLAY  141 (181)
T ss_pred             hhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence            53 1 124567788999997 998865

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>PRK08303 short chain dehydrogenase; Provisional

Probab=94.88  E-value=0.25  Score=45.44  Aligned_cols=34  Identities=32%  Similarity=0.330  Sum_probs=29.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      .++++||+|+ +++|.++++.+...|+ +|+.++++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS   41 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence            4789999987 7999999999999999 78888776

>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2

Probab=94.88  E-value=0.066  Score=47.59  Aligned_cols=96  Identities=20%  Similarity=0.162  Sum_probs=62.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc--------e--eecCCCCCccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--------D--FVNTSEHDRPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~--------~--vi~~~~~~~~~~~~~~~~~~~  257 (373)
                      ..++|||+|.|. |..+-.+++.....+|.+++.+++-.+.++++-..        +  ++.   .|  -...+++....
T Consensus        76 ~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~---~D--g~~~l~~~~~~  149 (246)
T PF01564_consen   76 NPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII---GD--GRKFLKETQEE  149 (246)
T ss_dssp             ST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE---ST--HHHHHHTSSST
T ss_pred             CcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE---hh--hHHHHHhccCC
Confidence            679999998755 44455677766666899999999988888774211        1  111   11  44445543333


Q ss_pred             CccEEE-EccC---------ChHhHHHHHHHhhcCCcEEEEEc
Q 017336          258 GVDRSV-ECTG---------NIDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       258 ~~d~vi-d~~g---------~~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      .+|+|+ |...         +.++++.+.++|+++ |.++.-.
T Consensus       150 ~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~-Gv~v~~~  191 (246)
T PF01564_consen  150 KYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPD-GVLVLQA  191 (246)
T ss_dssp             -EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCC-cEEEEEc
Confidence            799977 4443         247889999999997 9888654

5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....

>PRK06720 hypothetical protein; Provisional

Probab=94.87  E-value=0.28  Score=40.87  Aligned_cols=39  Identities=23%  Similarity=0.162  Sum_probs=32.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE  227 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~  227 (373)
                      .++.++|+|+ +++|...+..+...|+ +|++++++.+..+
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~   54 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQ   54 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHH
Confidence            4788999987 7999998888888898 8999988766543

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=94.85  E-value=0.33  Score=43.36  Aligned_cols=100  Identities=21%  Similarity=0.202  Sum_probs=65.9

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc-eeecCCCCCccHHHHHHHHcCCCc
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGV  259 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~-~vi~~~~~~~~~~~~~~~~~~~~~  259 (373)
                      .....+.++++||=+|+|. |..+..+++..+..+|++++.++...+.+++.-.. .++..+     ..+ +  .....+
T Consensus        24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d-----~~~-~--~~~~~f   94 (258)
T PRK01683         24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEAD-----IAS-W--QPPQAL   94 (258)
T ss_pred             HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECc-----hhc-c--CCCCCc
Confidence            3445667889999998864 66677888776434899999999988888764221 122111     110 0  112379


Q ss_pred             cEEEEccC------ChHhHHHHHHHhhcCCcEEEEEc
Q 017336          260 DRSVECTG------NIDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       260 d~vid~~g------~~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      |+|+....      ....+..+.+.|+++ |.+++..
T Consensus        95 D~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~~  130 (258)
T PRK01683         95 DLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQM  130 (258)
T ss_pred             cEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEEC
Confidence            99987543      125688899999997 9988753

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=94.83  E-value=0.18  Score=44.78  Aligned_cols=79  Identities=18%  Similarity=0.235  Sum_probs=49.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~  257 (373)
                      .+++|||+|+ |.+|...+..+...|+ +|+.++++.++.+.+    ++.+.+. +  .|..+.+ .+.+.+....  .+
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~~   87 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQ-ELSALADFALSKLG   87 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence            4789999987 8999999998888999 788887777665433    2233322 2  2322211 1222222221  13


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|+++.+.|.
T Consensus        88 ~~d~li~~ag~   98 (255)
T PRK06113         88 KVDILVNNAGG   98 (255)
T ss_pred             CCCEEEECCCC
Confidence            78999998873

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=94.81  E-value=0.074  Score=45.80  Aligned_cols=104  Identities=24%  Similarity=0.266  Sum_probs=67.8

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHc--CCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcC-
Q 017336          184 AKPERGSSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN-  256 (373)
Q Consensus       184 ~~~~~~~~vlI~G~g~~G~~ai~la~~~--g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~-  256 (373)
                      .+....++||-+|.+. |+.++.+|+.+  +. +|++++.++++.+.+++    .|...-+.....+  ..+.+.++.. 
T Consensus        41 ~~~~~~k~vLEIGt~~-GySal~la~~l~~~g-~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gd--a~~~l~~l~~~  116 (205)
T PF01596_consen   41 VRLTRPKRVLEIGTFT-GYSALWLAEALPEDG-KITTIEIDPERAEIARENFRKAGLDDRIEVIEGD--ALEVLPELAND  116 (205)
T ss_dssp             HHHHT-SEEEEESTTT-SHHHHHHHHTSTTTS-EEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES---HHHHHHHHHHT
T ss_pred             HHhcCCceEEEecccc-ccHHHHHHHhhcccc-eEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEec--cHhhHHHHHhc
Confidence            4445668999998754 77778888776  34 99999999998888754    5653322222222  4444554432 


Q ss_pred             ---CCccEEEEccCCh---HhHHHHHHHhhcCCcEEEEEcCC
Q 017336          257 ---GGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       257 ---~~~d~vid~~g~~---~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                         +.||.||-=....   ..++.++++|+++ |.++.=+..
T Consensus       117 ~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN~l  157 (205)
T PF01596_consen  117 GEEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADNVL  157 (205)
T ss_dssp             TTTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEETTT
T ss_pred             cCCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcccc
Confidence               3699987644432   4577889999996 888776554

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=94.81  E-value=0.38  Score=43.81  Aligned_cols=94  Identities=17%  Similarity=0.167  Sum_probs=57.1

Q ss_pred             CEEEEECCCHHHHH-HHHHHHHcCCcEEEEEcCChh--HHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          190 SSVAVFGLGAVGLA-AAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       190 ~~vlI~G~g~~G~~-ai~la~~~g~~~V~~~~~~~~--~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      -+|.|+|.|.+|.. +..+.+.-+.+-+.+++.+.+  .+++++++|.....    .+  +...+....-..+|+||+++
T Consensus         5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~----~~--ie~LL~~~~~~dIDiVf~AT   78 (302)
T PRK08300          5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA----EG--IDGLLAMPEFDDIDIVFDAT   78 (302)
T ss_pred             CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc----CC--HHHHHhCcCCCCCCEEEECC
Confidence            46899999999986 445555446644445555554  34667788865321    11  22222211012699999999


Q ss_pred             CChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          267 GNIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       267 g~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      +...+.+.+.+++..  |+.++...
T Consensus        79 ~a~~H~e~a~~a~ea--Gk~VID~s  101 (302)
T PRK08300         79 SAGAHVRHAAKLREA--GIRAIDLT  101 (302)
T ss_pred             CHHHHHHHHHHHHHc--CCeEEECC
Confidence            986677777777666  55555444

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=94.81  E-value=0.21  Score=50.71  Aligned_cols=93  Identities=12%  Similarity=0.202  Sum_probs=65.1

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      .++|+|+|.|.+|+..++.++..|. ++++++.++++.+.+++.|...++ -+..+   .+.+++..-..+|.++-++++
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDat~---~~~L~~agi~~A~~vvv~~~d  474 (621)
T PRK03562        400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GDATR---MDLLESAGAAKAEVLINAIDD  474 (621)
T ss_pred             cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-EeCCC---HHHHHhcCCCcCCEEEEEeCC
Confidence            3689999999999999999999998 899999999999999998875433 22222   122333322379999999988


Q ss_pred             hHhHH---HHHHHhhcCCcEEE
Q 017336          269 IDNMI---SAFECVHDGWGVAV  287 (373)
Q Consensus       269 ~~~~~---~~~~~l~~~~g~~v  287 (373)
                      ++.-.   ...+.+.|+ -+++
T Consensus       475 ~~~n~~i~~~ar~~~p~-~~ii  495 (621)
T PRK03562        475 PQTSLQLVELVKEHFPH-LQII  495 (621)
T ss_pred             HHHHHHHHHHHHHhCCC-CeEE
Confidence            54322   334444554 4443

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=94.80  E-value=0.26  Score=47.03  Aligned_cols=82  Identities=21%  Similarity=0.347  Sum_probs=50.8

Q ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHH-------HHHhc-CCcee-ecCCCCCccHHHHHHH
Q 017336          184 AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE-------EAKKF-GVTDF-VNTSEHDRPIQEVIAE  253 (373)
Q Consensus       184 ~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~-------~~~~l-g~~~v-i~~~~~~~~~~~~~~~  253 (373)
                      ..-..+.+|||+|+ |.+|..++..+...|. +|+++.++..+.+       ..... ++..+ .|..+.+ .+.+.++.
T Consensus        55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~-~l~~~~~~  132 (390)
T PLN02657         55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDAD-SLRKVLFS  132 (390)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHH-HHHHHHHH
Confidence            44556789999987 9999999999988898 7888888765321       11112 33322 2332221 13222322


Q ss_pred             HcCCCccEEEEccCC
Q 017336          254 MTNGGVDRSVECTGN  268 (373)
Q Consensus       254 ~~~~~~d~vid~~g~  268 (373)
                      . +.++|+||+|.+.
T Consensus       133 ~-~~~~D~Vi~~aa~  146 (390)
T PLN02657        133 E-GDPVDVVVSCLAS  146 (390)
T ss_pred             h-CCCCcEEEECCcc
Confidence            2 1169999999864

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=94.80  E-value=0.3  Score=43.63  Aligned_cols=97  Identities=25%  Similarity=0.230  Sum_probs=61.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCceeecCCCCCccHHHHHHHHcCCCccEE
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  262 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l----g~~~vi~~~~~~~~~~~~~~~~~~~~~d~v  262 (373)
                      .++.+||=+|+|. |..+..+++. |. +|++++.+++..+.+++.    |...-+.....+  .. .+.....+.+|+|
T Consensus        43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d--~~-~l~~~~~~~fD~V  116 (255)
T PRK11036         43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCA--AQ-DIAQHLETPVDLI  116 (255)
T ss_pred             CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEcC--HH-HHhhhcCCCCCEE
Confidence            4567888888865 6677777775 76 899999999888877653    321101111111  21 1222233479999


Q ss_pred             EEccC-----C-hHhHHHHHHHhhcCCcEEEEEc
Q 017336          263 VECTG-----N-IDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       263 id~~g-----~-~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      +....     . ...+..+.+.|+|+ |+++++-
T Consensus       117 ~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~~  149 (255)
T PRK11036        117 LFHAVLEWVADPKSVLQTLWSVLRPG-GALSLMF  149 (255)
T ss_pred             EehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence            86422     2 24678999999997 9997653

>PLN02823 spermine synthase

Probab=94.79  E-value=0.32  Score=45.22  Aligned_cols=99  Identities=13%  Similarity=0.086  Sum_probs=61.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC-ce-eecCCCC---CccHHHHHHHHcCCCccEE
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-TD-FVNTSEH---DRPIQEVIAEMTNGGVDRS  262 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~-~~-vi~~~~~---~~~~~~~~~~~~~~~~d~v  262 (373)
                      ..++|||+|+|. |..+..+++..+..+|++++.+++-.+.++++-. .. ..+...-   -.+..+.+++ ..+.+|+|
T Consensus       103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~~~~yDvI  180 (336)
T PLN02823        103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-RDEKFDVI  180 (336)
T ss_pred             CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-CCCCccEE
Confidence            457899998864 4555667776666689999999999999887421 10 0100000   0113344432 34489997


Q ss_pred             EEccC------------ChHhHH-HHHHHhhcCCcEEEEE
Q 017336          263 VECTG------------NIDNMI-SAFECVHDGWGVAVLV  289 (373)
Q Consensus       263 id~~g------------~~~~~~-~~~~~l~~~~g~~v~~  289 (373)
                      |-=..            +.++++ .+.+.|+++ |.++.-
T Consensus       181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q  219 (336)
T PLN02823        181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQ  219 (336)
T ss_pred             EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEe
Confidence            75321            124666 788999997 988754

>PRK13243 glyoxylate reductase; Reviewed

Probab=94.78  E-value=0.23  Score=46.28  Aligned_cols=88  Identities=19%  Similarity=0.257  Sum_probs=57.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .|++|.|+|.|.+|...++.++.+|. +|++.+++.+.. ...+++...    .  +  +.+.+.     ..|+|+.++.
T Consensus       149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~~----~--~--l~ell~-----~aDiV~l~lP  213 (333)
T PRK13243        149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAEY----R--P--LEELLR-----ESDFVSLHVP  213 (333)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCEe----c--C--HHHHHh-----hCCEEEEeCC
Confidence            57899999999999999999999999 899998765432 233444321    1  1  222221     3577777765


Q ss_pred             ChH----hH-HHHHHHhhcCCcEEEEEcC
Q 017336          268 NID----NM-ISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       268 ~~~----~~-~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..+    .+ ...+..|+++ ..++.++.
T Consensus       214 ~t~~T~~~i~~~~~~~mk~g-a~lIN~aR  241 (333)
T PRK13243        214 LTKETYHMINEERLKLMKPT-AILVNTAR  241 (333)
T ss_pred             CChHHhhccCHHHHhcCCCC-eEEEECcC
Confidence            422    12 3566777775 66666654

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.78  E-value=0.21  Score=45.10  Aligned_cols=78  Identities=21%  Similarity=0.318  Sum_probs=47.0

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCcEEEEEcCCh---hHHHHH-HhcCCcee--ecCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSS---KRFEEA-KKFGVTDF--VNTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~---g~~G~~ai~la~~~g~~~V~~~~~~~---~~~~~~-~~lg~~~v--i~~~~~~--~~~~~~~~~~~~  256 (373)
                      .++++||+|+   +++|.+.+..+...|+ +|+.+.+++   ++.+.+ ++++....  .|..+..  ..+.+.+.+.. 
T Consensus         9 ~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-   86 (272)
T PRK08159          9 AGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW-   86 (272)
T ss_pred             cCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc-
Confidence            5689999986   5899999999888999 788776654   222222 33453222  2222211  11222222222 


Q ss_pred             CCccEEEEccC
Q 017336          257 GGVDRSVECTG  267 (373)
Q Consensus       257 ~~~d~vid~~g  267 (373)
                      +++|+++++.|
T Consensus        87 g~iD~lv~nAG   97 (272)
T PRK08159         87 GKLDFVVHAIG   97 (272)
T ss_pred             CCCcEEEECCc
Confidence            37999999876

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=94.78  E-value=0.082  Score=49.59  Aligned_cols=75  Identities=13%  Similarity=0.109  Sum_probs=47.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcC----Ccee-ecCCCCCccHHHHHHHHcCC-Cc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG----VTDF-VNTSEHDRPIQEVIAEMTNG-GV  259 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg----~~~v-i~~~~~~~~~~~~~~~~~~~-~~  259 (373)
                      ++++|||+|+ |.+|..+++.+...|. +|++++++....... ..++    ...+ .|..+     .+.+.+...+ ++
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-----~~~~~~~~~~~~~   76 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD-----AAKLRKAIAEFKP   76 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCC-----HHHHHHHHhhcCC
Confidence            3689999987 9999999999999998 788888765432221 2222    1111 12211     1223333333 68


Q ss_pred             cEEEEccCC
Q 017336          260 DRSVECTGN  268 (373)
Q Consensus       260 d~vid~~g~  268 (373)
                      |+||++.+.
T Consensus        77 d~vih~A~~   85 (349)
T TIGR02622        77 EIVFHLAAQ   85 (349)
T ss_pred             CEEEECCcc
Confidence            999999873

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02244 tocopherol O-methyltransferase

Probab=94.77  E-value=0.19  Score=47.00  Aligned_cols=95  Identities=19%  Similarity=0.232  Sum_probs=63.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCc-e--eecCCCCCccHHHHHHHHcCCCc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVT-D--FVNTSEHDRPIQEVIAEMTNGGV  259 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l----g~~-~--vi~~~~~~~~~~~~~~~~~~~~~  259 (373)
                      +++++||=+|+|. |..+..+++..|+ +|++++.++...+.+++.    +.. .  ++..+..+      + .+..+.|
T Consensus       117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~------~-~~~~~~F  187 (340)
T PLN02244        117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADALN------Q-PFEDGQF  187 (340)
T ss_pred             CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCccc------C-CCCCCCc
Confidence            6788999888865 5667788887788 899999999877766542    332 1  11111110      0 1122379


Q ss_pred             cEEEEccCC------hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          260 DRSVECTGN------IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       260 d~vid~~g~------~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      |+|+.....      ...+..+.+.|+++ |++++...
T Consensus       188 D~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~  224 (340)
T PLN02244        188 DLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW  224 (340)
T ss_pred             cEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            999874321      24678899999997 99988653

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=94.75  E-value=0.82  Score=42.33  Aligned_cols=90  Identities=22%  Similarity=0.287  Sum_probs=62.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      -.|+++.|+|.|.+|.+.++.++.+|. +|+..+++.. .+..+.+++.++-        +.+.++     ..|++.-.+
T Consensus       144 l~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~~--------l~ell~-----~sDii~l~~  208 (324)
T COG1052         144 LRGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN-PEAEKELGARYVD--------LDELLA-----ESDIISLHC  208 (324)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC-hHHHhhcCceecc--------HHHHHH-----hCCEEEEeC
Confidence            358999999999999999999999999 8999988765 4444555554321        212221     468876655


Q ss_pred             C-ChH---h-HHHHHHHhhcCCcEEEEEcCC
Q 017336          267 G-NID---N-MISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       267 g-~~~---~-~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      + .++   . =...++.|+++ +.+|.++-.
T Consensus       209 Plt~~T~hLin~~~l~~mk~g-a~lVNtaRG  238 (324)
T COG1052         209 PLTPETRHLINAEELAKMKPG-AILVNTARG  238 (324)
T ss_pred             CCChHHhhhcCHHHHHhCCCC-eEEEECCCc
Confidence            4 322   1 23778899997 888877654

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=94.74  E-value=0.33  Score=43.60  Aligned_cols=106  Identities=17%  Similarity=0.169  Sum_probs=67.6

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc-eeecCCCCCccHHHHHHHHcCCC
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGG  258 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~-~vi~~~~~~~~~~~~~~~~~~~~  258 (373)
                      +.....+.++.+||=+|+|. |..+..+++..++ +|++++.+++..+.+++.... .-+.....+  +.+  ..+..+.
T Consensus        44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D--~~~--~~~~~~~  117 (263)
T PTZ00098         44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEAND--ILK--KDFPENT  117 (263)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEECC--ccc--CCCCCCC
Confidence            45567888999999998864 5556677777787 899999999888887763221 101111111  100  0111236


Q ss_pred             ccEEEEcc-----C---ChHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          259 VDRSVECT-----G---NIDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       259 ~d~vid~~-----g---~~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ||+|+..-     +   ....+..+.+.|+|+ |++++....
T Consensus       118 FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~~  158 (263)
T PTZ00098        118 FDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDYC  158 (263)
T ss_pred             eEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEec
Confidence            99998621     1   124677889999997 999887543

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=94.73  E-value=0.12  Score=46.91  Aligned_cols=44  Identities=25%  Similarity=0.268  Sum_probs=37.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  230 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~  230 (373)
                      ..++++||+|+|+.+.+++..+...|+.+++++.|+.+|.+.+.
T Consensus       125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La  168 (283)
T PRK14027        125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA  168 (283)
T ss_pred             cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence            34789999999999999998888899989999999988766654

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.72  E-value=0.26  Score=44.47  Aligned_cols=94  Identities=21%  Similarity=0.182  Sum_probs=63.9

Q ss_pred             cccchhhhhhhhhhccCC-CCCCEEEEECCC-HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCcc
Q 017336          169 LSCGVSTGLGATLNVAKP-ERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP  246 (373)
Q Consensus       169 ~~~~~~ta~~~l~~~~~~-~~~~~vlI~G~g-~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~  246 (373)
                      .||+....+. +++..++ -.|++|+|+|.| .+|.-.+.++...|+ .|.++.+....                     
T Consensus       137 ~PcTp~avi~-lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gA-tVtv~hs~t~~---------------------  193 (285)
T PRK14191        137 VPATPMGVMR-LLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGA-SVSVCHILTKD---------------------  193 (285)
T ss_pred             CCCcHHHHHH-HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-EEEEEeCCcHH---------------------
Confidence            4555444444 3344444 369999999986 999999999999999 78777322111                     


Q ss_pred             HHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          247 IQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       247 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +    .+.+. .+|+|+-++|.+.++.  -+.++++ ..++.+|...
T Consensus       194 l----~~~~~-~ADIvV~AvG~p~~i~--~~~vk~G-avVIDvGi~~  232 (285)
T PRK14191        194 L----SFYTQ-NADIVCVGVGKPDLIK--ASMVKKG-AVVVDIGINR  232 (285)
T ss_pred             H----HHHHH-hCCEEEEecCCCCcCC--HHHcCCC-cEEEEeeccc
Confidence            1    12221 4799999999977654  4567886 8888888643

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=94.72  E-value=0.19  Score=51.71  Aligned_cols=113  Identities=22%  Similarity=0.302  Sum_probs=65.8

Q ss_pred             eeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC
Q 017336          143 FSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR  221 (373)
Q Consensus       143 ~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~  221 (373)
                      ..+|.-+++...+.+ +-.+++++=.-..+          ....-.++++||+|+ |.+|.++++.+...|+ +|+++++
T Consensus       379 ~~~~~~~~~~~~f~~-eyw~~e~~kl~~~~----------~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r  446 (676)
T TIGR02632       379 VSEYVSLPEQEAFDI-EYWPLEEAKLRRMP----------KEKTLARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADL  446 (676)
T ss_pred             ccceecCchhhccch-hhhhhhHHhhccCC----------CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeC
Confidence            355666666666666 55555554221100          011124689999987 8999999999988999 8999988


Q ss_pred             ChhHHHHHH-h----cCCce--e--ecCCCCCccHHHHHHHHc--CCCccEEEEccCC
Q 017336          222 SSKRFEEAK-K----FGVTD--F--VNTSEHDRPIQEVIAEMT--NGGVDRSVECTGN  268 (373)
Q Consensus       222 ~~~~~~~~~-~----lg~~~--v--i~~~~~~~~~~~~~~~~~--~~~~d~vid~~g~  268 (373)
                      +.++.+.+. +    .+...  .  .|..+.+ .+.+.+.+..  -+++|++|++.|.
T Consensus       447 ~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~-~v~~a~~~i~~~~g~iDilV~nAG~  503 (676)
T TIGR02632       447 NLEAAEAVAAEINGQFGAGRAVALKMDVTDEQ-AVKAAFADVALAYGGVDIVVNNAGI  503 (676)
T ss_pred             CHHHHHHHHHHHHhhcCCCcEEEEECCCCCHH-HHHHHHHHHHHhcCCCcEEEECCCC
Confidence            876655432 2    23211  1  2222211 1223333221  2379999999884

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=94.69  E-value=0.22  Score=47.62  Aligned_cols=74  Identities=22%  Similarity=0.305  Sum_probs=47.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCc-ee--ecCCCCCccHHHHHHHHcCCCccEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT-DF--VNTSEHDRPIQEVIAEMTNGGVDRS  262 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~-~v--i~~~~~~~~~~~~~~~~~~~~~d~v  262 (373)
                      .+++++|+|+ |++|.+.+..+...|+ +|+++++++++.+... +.+.. ..  .|..+.     +.+.+.. +++|++
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~-----~~v~~~l-~~IDiL  249 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQE-----AALAELL-EKVDIL  249 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCH-----HHHHHHh-CCCCEE
Confidence            4689999988 8999999998888899 8888888776553321 11111 11  222221     2233333 369999


Q ss_pred             EEccCC
Q 017336          263 VECTGN  268 (373)
Q Consensus       263 id~~g~  268 (373)
                      |++.|.
T Consensus       250 InnAGi  255 (406)
T PRK07424        250 IINHGI  255 (406)
T ss_pred             EECCCc
Confidence            998763

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=94.68  E-value=0.084  Score=46.74  Aligned_cols=109  Identities=22%  Similarity=0.221  Sum_probs=64.8

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHH-HHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQE-VIAE  253 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~-~~~~  253 (373)
                      +....++.||++|+=.|.|. |.++..+++..| -.+|+..+.++++.+.+++    +|....+.....|  +.+ ...+
T Consensus        32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~D--v~~~g~~~  108 (247)
T PF08704_consen   32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRD--VCEEGFDE  108 (247)
T ss_dssp             HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES---GGCG--ST
T ss_pred             HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecc--eecccccc
Confidence            44568999999999887644 556666776664 3389999999998887754    5654221111111  110 0101


Q ss_pred             HcCCCccEEEE-ccCChHhHHHHHHHh-hcCCcEEEEEcCC
Q 017336          254 MTNGGVDRSVE-CTGNIDNMISAFECV-HDGWGVAVLVGVP  292 (373)
Q Consensus       254 ~~~~~~d~vid-~~g~~~~~~~~~~~l-~~~~g~~v~~g~~  292 (373)
                      .....+|.||- --.-...+..+.+.| +++ |+++.+...
T Consensus       109 ~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP~  148 (247)
T PF08704_consen  109 ELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSPC  148 (247)
T ss_dssp             T-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEESS
T ss_pred             cccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECCC
Confidence            11236887654 444446899999999 887 999988653

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=94.68  E-value=0.33  Score=39.82  Aligned_cols=84  Identities=17%  Similarity=0.168  Sum_probs=54.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee------ecCC-CCCccHHHHHHHHcCCCccEEE
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF------VNTS-EHDRPIQEVIAEMTNGGVDRSV  263 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v------i~~~-~~~~~~~~~~~~~~~~~~d~vi  263 (373)
                      +|.|+|+|..|.+++.++...|. .|....++++..+.+++-+....      +... ....++.+.+     .+.|+++
T Consensus         1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~-----~~ad~Ii   74 (157)
T PF01210_consen    1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEAL-----EDADIII   74 (157)
T ss_dssp             EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHH-----TT-SEEE
T ss_pred             CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHh-----CcccEEE
Confidence            58899999999999999999997 89999999888877765332100      0000 0001133323     2689999


Q ss_pred             EccCChHhHHHHHHHhhc
Q 017336          264 ECTGNIDNMISAFECVHD  281 (373)
Q Consensus       264 d~~g~~~~~~~~~~~l~~  281 (373)
                      -++.+ ..+...++.+++
T Consensus        75 iavPs-~~~~~~~~~l~~   91 (157)
T PF01210_consen   75 IAVPS-QAHREVLEQLAP   91 (157)
T ss_dssp             E-S-G-GGHHHHHHHHTT
T ss_pred             ecccH-HHHHHHHHHHhh
Confidence            99988 555666666666

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=94.68  E-value=0.25  Score=44.80  Aligned_cols=67  Identities=22%  Similarity=0.323  Sum_probs=48.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      +|.|+|.|.+|...+..++..|. .|+++++++++.+.+.+.|....   ...+  . +.+     ...|+||.|+...
T Consensus         2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~---~~~~--~-~~~-----~~aDlVilavp~~   68 (279)
T PRK07417          2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDE---ASTD--L-SLL-----KDCDLVILALPIG   68 (279)
T ss_pred             eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCccc---ccCC--H-hHh-----cCCCEEEEcCCHH
Confidence            58899999999988888888888 89999999998888888775211   1111  1 111     2579999998753

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=94.67  E-value=0.2  Score=45.69  Aligned_cols=70  Identities=16%  Similarity=0.141  Sum_probs=49.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  270 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  270 (373)
                      +|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|....   .  +  ..+.+     ...|+||.|+....
T Consensus         1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~---~--~--~~~~~-----~~aDivi~~vp~~~   67 (291)
T TIGR01505         1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA---E--T--ARQVT-----EQADVIFTMVPDSP   67 (291)
T ss_pred             CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc---C--C--HHHHH-----hcCCEEEEecCCHH
Confidence            37889999999988888888898 89999999999888887775321   1  1  21111     14688888877643


Q ss_pred             hHH
Q 017336          271 NMI  273 (373)
Q Consensus       271 ~~~  273 (373)
                      ...
T Consensus        68 ~~~   70 (291)
T TIGR01505        68 QVE   70 (291)
T ss_pred             HHH
Confidence            333

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK08278 short chain dehydrogenase; Provisional

Probab=94.65  E-value=0.2  Score=45.20  Aligned_cols=36  Identities=28%  Similarity=0.413  Sum_probs=30.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK  224 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~  224 (373)
                      .++++||+|+ |.+|...+..+...|+ +|++++++.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~   41 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE   41 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence            4678999987 8999999998888999 7888877643

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=94.64  E-value=0.25  Score=45.15  Aligned_cols=71  Identities=21%  Similarity=0.243  Sum_probs=49.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      .+|.|+|.|.+|...+..+...|. +|++.+++.++.+.+.+.|....   .+    +.+.+     ...|+||.|+...
T Consensus         3 ~~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~~---~~----~~e~~-----~~~d~vi~~vp~~   69 (296)
T PRK11559          3 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAETA---ST----AKAVA-----EQCDVIITMLPNS   69 (296)
T ss_pred             ceEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec---CC----HHHHH-----hcCCEEEEeCCCH
Confidence            368999999999988887778888 89999999988888777765321   11    22211     1468888887754


Q ss_pred             HhHH
Q 017336          270 DNMI  273 (373)
Q Consensus       270 ~~~~  273 (373)
                      ....
T Consensus        70 ~~~~   73 (296)
T PRK11559         70 PHVK   73 (296)
T ss_pred             HHHH
Confidence            4433

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=94.64  E-value=0.26  Score=43.81  Aligned_cols=104  Identities=16%  Similarity=0.146  Sum_probs=61.8

Q ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc--CCcee-ecCCCCCccHHHHHHHHcCCCc
Q 017336          184 AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF--GVTDF-VNTSEHDRPIQEVIAEMTNGGV  259 (373)
Q Consensus       184 ~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l--g~~~v-i~~~~~~~~~~~~~~~~~~~~~  259 (373)
                      +.-..+++|||+|+ |.+|...+..+...|+ +|+++.++.++.......  ++..+ .|..+.    .+.+.+....++
T Consensus        12 ~~~~~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~----~~~l~~~~~~~~   86 (251)
T PLN00141         12 AENVKTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG----SDKLVEAIGDDS   86 (251)
T ss_pred             cccccCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCCC----HHHHHHHhhcCC
Confidence            33344689999997 9999999988888898 788888887665433221  23222 233321    122323322268


Q ss_pred             cEEEEccCChH-------------hHHHHHHHhhcC-CcEEEEEcCC
Q 017336          260 DRSVECTGNID-------------NMISAFECVHDG-WGVAVLVGVP  292 (373)
Q Consensus       260 d~vid~~g~~~-------------~~~~~~~~l~~~-~g~~v~~g~~  292 (373)
                      |+||.+.|...             .....++.+... .++++.++..
T Consensus        87 d~vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~  133 (251)
T PLN00141         87 DAVICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI  133 (251)
T ss_pred             CEEEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence            99998876421             123344444432 2678887764

>PRK05650 short chain dehydrogenase; Provisional

Probab=94.63  E-value=0.23  Score=44.57  Aligned_cols=77  Identities=21%  Similarity=0.251  Sum_probs=47.7

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-ee--cCCCCCccHHHHHHHHc--CCCc
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT--NGGV  259 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-vi--~~~~~~~~~~~~~~~~~--~~~~  259 (373)
                      +++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+    ++.+.+. ++  |..+.. .+.+.+....  .+++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYS-QLTALAQACEEKWGGI   78 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHHHcCCC
Confidence            36899987 8999999988888899 788888887665433    2233332 12  222211 1222222211  1379


Q ss_pred             cEEEEccCC
Q 017336          260 DRSVECTGN  268 (373)
Q Consensus       260 d~vid~~g~  268 (373)
                      |++|++.|.
T Consensus        79 d~lI~~ag~   87 (270)
T PRK05650         79 DVIVNNAGV   87 (270)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=94.63  E-value=0.84  Score=40.57  Aligned_cols=97  Identities=13%  Similarity=0.208  Sum_probs=62.5

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc-eeecCCCCCccHHHHHHHHcCCCccEEE
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSV  263 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~-~vi~~~~~~~~~~~~~~~~~~~~~d~vi  263 (373)
                      ...++.+||-+|+|. |..+..+++ .|. .|++++.+++..+.+++.... .++..+-..      + ....+.||+|+
T Consensus        39 ~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~~------~-~~~~~~fD~V~  108 (251)
T PRK10258         39 PQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGDIES------L-PLATATFDLAW  108 (251)
T ss_pred             CccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcCccc------C-cCCCCcEEEEE
Confidence            334678899999875 655555554 576 899999999998888775421 122111110      0 11223699998


Q ss_pred             EccC------ChHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          264 ECTG------NIDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       264 d~~g------~~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ....      -...+..+.+.|+++ |.+++....
T Consensus       109 s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~~  142 (251)
T PRK10258        109 SNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTLV  142 (251)
T ss_pred             ECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeCC
Confidence            7542      124678889999997 998876543

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.62  E-value=0.25  Score=44.41  Aligned_cols=80  Identities=20%  Similarity=0.238  Sum_probs=50.6

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh----HHHHHHhcC-Cc-eeecCCCCC--ccHHHHHHHHcCC
Q 017336          187 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK----RFEEAKKFG-VT-DFVNTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       187 ~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~----~~~~~~~lg-~~-~vi~~~~~~--~~~~~~~~~~~~~  257 (373)
                      ..|+.|||+|+ +++|.+.++=..++|+ +++..+.+.+    ..+.+++.| +. .+.|..+.+  ....+.+++..+ 
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G-  113 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG-  113 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC-
Confidence            46899999987 6999987776677787 7877777653    344455445 21 234433322  113334444433 


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      .+|++++.+|-
T Consensus       114 ~V~ILVNNAGI  124 (300)
T KOG1201|consen  114 DVDILVNNAGI  124 (300)
T ss_pred             CceEEEecccc
Confidence            79999998873

>PLN02256 arogenate dehydrogenase

Probab=94.60  E-value=0.31  Score=44.81  Aligned_cols=93  Identities=17%  Similarity=0.215  Sum_probs=58.6

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEE
Q 017336          184 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV  263 (373)
Q Consensus       184 ~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vi  263 (373)
                      ..-....+|.|+|.|.+|...+..++..|. .|+++++++. .+.++++|+..   ..+    ..+.+    ....|+||
T Consensus        31 ~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~---~~~----~~e~~----~~~aDvVi   97 (304)
T PLN02256         31 LEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF---FRD----PDDFC----EEHPDVVL   97 (304)
T ss_pred             hccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee---eCC----HHHHh----hCCCCEEE
Confidence            333456789999999999998888888887 7888888764 35666677632   111    11111    12478888


Q ss_pred             EccCChHhHHHHHHH-----hhcCCcEEEEEcC
Q 017336          264 ECTGNIDNMISAFEC-----VHDGWGVAVLVGV  291 (373)
Q Consensus       264 d~~g~~~~~~~~~~~-----l~~~~g~~v~~g~  291 (373)
                      -|+... .+...++-     ++++ ..++.++.
T Consensus        98 lavp~~-~~~~vl~~l~~~~l~~~-~iviDv~S  128 (304)
T PLN02256         98 LCTSIL-STEAVLRSLPLQRLKRS-TLFVDVLS  128 (304)
T ss_pred             EecCHH-HHHHHHHhhhhhccCCC-CEEEecCC
Confidence            888753 33333332     3454 56666655

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.59  E-value=0.3  Score=48.03  Aligned_cols=70  Identities=29%  Similarity=0.300  Sum_probs=48.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChh-----HHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEE
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-----RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  262 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~-----~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~v  262 (373)
                      .+++|+|+|+|.+|+.++.+++..|+ .|++++.++.     ..+.+++.|+.........           ...++|+|
T Consensus        15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-----------~~~~~D~V   82 (480)
T PRK01438         15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGPT-----------LPEDTDLV   82 (480)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-----------ccCCCCEE
Confidence            46789999999999999999999999 7988875542     2344666777544322111           01257888


Q ss_pred             EEccCCh
Q 017336          263 VECTGNI  269 (373)
Q Consensus       263 id~~g~~  269 (373)
                      +-+.|-+
T Consensus        83 v~s~Gi~   89 (480)
T PRK01438         83 VTSPGWR   89 (480)
T ss_pred             EECCCcC
Confidence            8877753

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.59  E-value=0.22  Score=45.99  Aligned_cols=89  Identities=17%  Similarity=0.259  Sum_probs=57.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .+++|.|+|.|.+|...++.++.+|. +|++.+++.++..     +...+...  .      .+.+... ..|+|+.+..
T Consensus       135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~~~--~------~l~e~l~-~aDvvv~~lP  199 (312)
T PRK15469        135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFAGR--E------ELSAFLS-QTRVLINLLP  199 (312)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeeccc--c------cHHHHHh-cCCEEEECCC
Confidence            57899999999999999999999999 8999977543321     22111100  0      1222222 4688888776


Q ss_pred             ChHh----H-HHHHHHhhcCCcEEEEEcCC
Q 017336          268 NIDN----M-ISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       268 ~~~~----~-~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ..+.    + ...++.|+++ ..+|.+|-.
T Consensus       200 lt~~T~~li~~~~l~~mk~g-a~lIN~aRG  228 (312)
T PRK15469        200 NTPETVGIINQQLLEQLPDG-AYLLNLARG  228 (312)
T ss_pred             CCHHHHHHhHHHHHhcCCCC-cEEEECCCc
Confidence            4322    2 3567778886 777777653

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.57  E-value=0.11  Score=40.90  Aligned_cols=79  Identities=24%  Similarity=0.347  Sum_probs=49.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEE-cCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGV-DRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~-~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      .-+|-|+|+|-+|......++..|. .|..+ +++.++.+.+.. ++...+.+..+           .. ..+|++|-++
T Consensus        10 ~l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~-----------~~-~~aDlv~iav   76 (127)
T PF10727_consen   10 RLKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE-----------IL-RDADLVFIAV   76 (127)
T ss_dssp             --EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG-----------GG-CC-SEEEE-S
T ss_pred             ccEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc-----------cc-ccCCEEEEEe
Confidence            3578999999999999999999998 67776 455556666655 34333322211           11 2689999999


Q ss_pred             CChHhHHHHHHHhhc
Q 017336          267 GNIDNMISAFECVHD  281 (373)
Q Consensus       267 g~~~~~~~~~~~l~~  281 (373)
                      .. +.+....+.|..
T Consensus        77 pD-daI~~va~~La~   90 (127)
T PF10727_consen   77 PD-DAIAEVAEQLAQ   90 (127)
T ss_dssp             -C-CHHHHHHHHHHC
T ss_pred             ch-HHHHHHHHHHHH
Confidence            88 677777777765

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.57  E-value=0.37  Score=43.92  Aligned_cols=38  Identities=24%  Similarity=0.338  Sum_probs=33.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHH
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE  228 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~  228 (373)
                      ++|.|+|+|.+|...++.+...|. .|+..+.+++..+.
T Consensus         6 ~~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~~~~   43 (286)
T PRK07819          6 QRVGVVGAGQMGAGIAEVCARAGV-DVLVFETTEELATA   43 (286)
T ss_pred             cEEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHH
Confidence            479999999999998888888899 89999999988766

>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]

Probab=94.56  E-value=0.96  Score=42.12  Aligned_cols=134  Identities=19%  Similarity=0.236  Sum_probs=78.2

Q ss_pred             CEEEEECCCHHH-HHHHHHHHHcC--CcEEEEEcCChhHHH-HHHhcCCceeecCCCCCccHHHHHHHHcCC-CccEEEE
Q 017336          190 SSVAVFGLGAVG-LAAAEGARIAG--ASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE  264 (373)
Q Consensus       190 ~~vlI~G~g~~G-~~ai~la~~~g--~~~V~~~~~~~~~~~-~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid  264 (373)
                      -+|.|+|+|..+ ...+..++..+  +..|.+++++.++.+ .++++|....+  .+        +.++... .+|+|+.
T Consensus         4 irvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~~--~~--------~~~ll~~~~iD~V~I   73 (342)
T COG0673           4 IRVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIAKAY--TD--------LEELLADPDIDAVYI   73 (342)
T ss_pred             eEEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCCccc--CC--------HHHHhcCCCCCEEEE
Confidence            368899997444 55666666654  445666678887744 55668876222  11        2233333 6999999


Q ss_pred             ccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeecc-chhhc--ccceEEEEeccCCCCCCCHHHHHHHHHcCCC
Q 017336          265 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  337 (373)
Q Consensus       265 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~--~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l  337 (373)
                      ++....+.+.+.++|..  |+=|++..+-..+.-+.. .....  +++.+.-..  ..+....++.+-+++.+|++
T Consensus        74 atp~~~H~e~~~~AL~a--GkhVl~EKPla~t~~ea~~l~~~a~~~~~~l~v~~--~~Rf~p~~~~~k~li~~g~l  145 (342)
T COG0673          74 ATPNALHAELALAALEA--GKHVLCEKPLALTLEEAEELVELARKAGVKLMVGF--NRRFDPAVQALKELIDSGAL  145 (342)
T ss_pred             cCCChhhHHHHHHHHhc--CCEEEEcCCCCCCHHHHHHHHHHHHHcCCceeeeh--hhhcCHHHHHHHHHHhcCCc
Confidence            99998899999999998  566777543311111111 01111  223332222  22333457778888888855

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=94.55  E-value=0.38  Score=42.65  Aligned_cols=106  Identities=17%  Similarity=0.156  Sum_probs=68.3

Q ss_pred             hccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHc-
Q 017336          182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-  255 (373)
Q Consensus       182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~-  255 (373)
                      ...+..+.++||-+|.+ +|+.++.+|+.++. .+|++++.+++..+.+++    .|...-+.....+  ..+.+.++. 
T Consensus        73 ~l~~~~~ak~iLEiGT~-~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G~--a~e~L~~l~~  149 (247)
T PLN02589         73 MLLKLINAKNTMEIGVY-TGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGP--ALPVLDQMIE  149 (247)
T ss_pred             HHHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEecc--HHHHHHHHHh
Confidence            33455667889999873 47777778876631 289999999988777644    5643322222222  445555543 


Q ss_pred             ----CCCccEEEEccCCh---HhHHHHHHHhhcCCcEEEEEcC
Q 017336          256 ----NGGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       256 ----~~~~d~vid~~g~~---~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                          .+.||.||-=....   ..++.+++.|+++ |.++.=+.
T Consensus       150 ~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~DNv  191 (247)
T PLN02589        150 DGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGYDNT  191 (247)
T ss_pred             ccccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEEcCC
Confidence                24799988654432   5677889999996 88765433

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=94.54  E-value=0.11  Score=47.16  Aligned_cols=94  Identities=19%  Similarity=0.216  Sum_probs=58.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      ..++++||+|+|++|.+++..+...|+.+|++++++.++.+.+.+ ++...-+.. ..+  .    .+.. ..+|+||+|
T Consensus       121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~--~----~~~~-~~~DivIna  192 (278)
T PRK00258        121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLE--L----QEEL-ADFDLIINA  192 (278)
T ss_pred             CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-ccc--c----hhcc-ccCCEEEEC
Confidence            456889999999999999999999996689999999887665543 432110111 000  1    0111 268999999


Q ss_pred             cCChHhH-----HHHHHHhhcCCcEEEEE
Q 017336          266 TGNIDNM-----ISAFECVHDGWGVAVLV  289 (373)
Q Consensus       266 ~g~~~~~-----~~~~~~l~~~~g~~v~~  289 (373)
                      +......     .....++.++ ..++.+
T Consensus       193 Tp~g~~~~~~~~~~~~~~l~~~-~~v~Di  220 (278)
T PRK00258        193 TSAGMSGELPLPPLPLSLLRPG-TIVYDM  220 (278)
T ss_pred             CcCCCCCCCCCCCCCHHHcCCC-CEEEEe
Confidence            8753210     1223556654 555444

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=94.54  E-value=0.49  Score=44.54  Aligned_cols=97  Identities=16%  Similarity=0.313  Sum_probs=63.3

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCcEEEEEc--CChhH-HHHHHhcCCceeecCCCCC-ccH--------------H
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIA--GASRIIGVD--RSSKR-FEEAKKFGVTDFVNTSEHD-RPI--------------Q  248 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~--g~~~V~~~~--~~~~~-~~~~~~lg~~~vi~~~~~~-~~~--------------~  248 (373)
                      ++|.|+|+ |.+|..++...++.  .+ +|+++.  ++.++ .+.+++++...+...++.. ..+              .
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~   80 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE   80 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence            57999996 99999999998765  56 666664  33333 4455678887765433211 001              1


Q ss_pred             HHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEE
Q 017336          249 EVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVL  288 (373)
Q Consensus       249 ~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~  288 (373)
                      +.+.++... .+|+|+.+.++...+.-.+.+++.+ -++.+
T Consensus        81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG-K~VaL  120 (385)
T PRK05447         81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG-KRIAL  120 (385)
T ss_pred             hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC-CcEEE
Confidence            122333333 6999999988877788899999884 44443

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=94.51  E-value=0.47  Score=42.57  Aligned_cols=102  Identities=16%  Similarity=0.235  Sum_probs=66.0

Q ss_pred             ccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHhc-C------Cce--eecCCCCCccHHHHHH
Q 017336          183 VAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKF-G------VTD--FVNTSEHDRPIQEVIA  252 (373)
Q Consensus       183 ~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~l-g------~~~--vi~~~~~~~~~~~~~~  252 (373)
                      ...+.++++||-+|+|. |..+..+++..+. .+|++++.+++.++.+++. .      .+.  ++..+..+      + 
T Consensus        68 ~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~------l-  139 (261)
T PLN02233         68 WSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATD------L-  139 (261)
T ss_pred             HhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccccc------C-
Confidence            34677889999998865 5566777877652 2899999999988887542 1      111  11111110      0 


Q ss_pred             HHcCCCccEEEEccC------ChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          253 EMTNGGVDRSVECTG------NIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       253 ~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      .+..+.||+|+...+      -...+.++.+.|+|+ |+++.+....
T Consensus       140 p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~~~  185 (261)
T PLN02233        140 PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDFNK  185 (261)
T ss_pred             CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEECCC
Confidence            011236999986433      125688999999997 9998876544

>PRK06523 short chain dehydrogenase; Provisional

Probab=94.50  E-value=0.16  Score=45.20  Aligned_cols=75  Identities=27%  Similarity=0.294  Sum_probs=46.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-eecCCCCC--ccHHHHHHHHcCCCccEEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHD--RPIQEVIAEMTNGGVDRSV  263 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~-vi~~~~~~--~~~~~~~~~~~~~~~d~vi  263 (373)
                      +++++||+|+ |.+|...++.+...|+ +|++++++.++..   .-.... ..|..+.+  ..+.+.+.+.. +++|++|
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~vi   82 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL---PEGVEFVAADLTTAEGCAAVARAVLERL-GGVDILV   82 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc---CCceeEEecCCCCHHHHHHHHHHHHHHc-CCCCEEE
Confidence            4689999987 8999999998888999 7988888754321   111111 12222211  01122222222 3689999


Q ss_pred             EccC
Q 017336          264 ECTG  267 (373)
Q Consensus       264 d~~g  267 (373)
                      ++.|
T Consensus        83 ~~ag   86 (260)
T PRK06523         83 HVLG   86 (260)
T ss_pred             ECCc
Confidence            9987

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.50  E-value=0.29  Score=43.95  Aligned_cols=78  Identities=21%  Similarity=0.307  Sum_probs=46.1

Q ss_pred             CCCEEEEECCC---HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCcee--ecCCCCCccHHHHHHHHcC--
Q 017336          188 RGSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDF--VNTSEHDRPIQEVIAEMTN--  256 (373)
Q Consensus       188 ~~~~vlI~G~g---~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l----g~~~v--i~~~~~~~~~~~~~~~~~~--  256 (373)
                      .++++||+|++   ++|.++++.+...|+ +|+.++++++..+.++++    +....  .|..+.+ ++.+.+.+...  
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~   82 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDA-SIDAMFAELGKVW   82 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHH-HHHHHHHHHHhhc
Confidence            46899999873   799998888888999 788877764222233322    22112  2322211 12222222221  


Q ss_pred             CCccEEEEccC
Q 017336          257 GGVDRSVECTG  267 (373)
Q Consensus       257 ~~~d~vid~~g  267 (373)
                      +.+|++|++.|
T Consensus        83 g~iD~linnAg   93 (262)
T PRK07984         83 PKFDGFVHSIG   93 (262)
T ss_pred             CCCCEEEECCc
Confidence            36999999987

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.46  E-value=0.24  Score=43.81  Aligned_cols=80  Identities=28%  Similarity=0.274  Sum_probs=47.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEE-EcCChhHHHH----HHhcCCce-eecCCCCCc-cHHHHHHHHc--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIG-VDRSSKRFEE----AKKFGVTD-FVNTSEHDR-PIQEVIAEMT--NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~-~~~~~~~~~~----~~~lg~~~-vi~~~~~~~-~~~~~~~~~~--~~  257 (373)
                      +++++||+|+ |.+|..++..+...|+ +|++ ..++.++.+.    +++.+... ++..+-.+. .....+.+..  .+
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3578999987 8999999999999999 6655 4566554432    23344332 221221111 1222222221  13


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus        82 ~id~vi~~ag~   92 (250)
T PRK08063         82 RLDVFVNNAAS   92 (250)
T ss_pred             CCCEEEECCCC
Confidence            68999998873

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=94.45  E-value=0.33  Score=42.51  Aligned_cols=71  Identities=21%  Similarity=0.285  Sum_probs=50.6

Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh--HHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          192 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       192 vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~--~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      |+|+|+ |.+|...++.+...+. +|.++.|+..  +...+++.|+..+ ..+-.+   .+.+.+... |+|.||.+.+.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~~---~~~l~~al~-g~d~v~~~~~~   74 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EADYDD---PESLVAALK-GVDAVFSVTPP   74 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES-TT----HHHHHHHHT-TCSEEEEESSC
T ss_pred             CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-ecccCC---HHHHHHHHc-CCceEEeecCc
Confidence            789998 9999999999999888 7888878753  4556677888654 222222   234544444 79999999883

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=94.44  E-value=0.82  Score=41.48  Aligned_cols=109  Identities=12%  Similarity=0.064  Sum_probs=71.9

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC-Cce----eecCCCCC--ccHHHHHHHHcCC
Q 017336          186 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-VTD----FVNTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       186 ~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg-~~~----vi~~~~~~--~~~~~~~~~~~~~  257 (373)
                      ..+++-|+|+|+ ++.|...+.-+...|+ +|++.--.++..+.++..- -++    .+|..+++  .+..+.+++..+.
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~  104 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGE  104 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence            456778999998 9999999998999999 7777766666655554322 111    23333322  1233445555555


Q ss_pred             -CccEEEEccCCh--------------------------HhHHHHHHHhhcCCcEEEEEcCCCCC
Q 017336          258 -GVDRSVECTGNI--------------------------DNMISAFECVHDGWGVAVLVGVPSKD  295 (373)
Q Consensus       258 -~~d~vid~~g~~--------------------------~~~~~~~~~l~~~~g~~v~~g~~~~~  295 (373)
                       +.-.++++.|-.                          ......+..+++..||+|.+++..+.
T Consensus       105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR  169 (322)
T KOG1610|consen  105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR  169 (322)
T ss_pred             ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC
Confidence             777888888721                          23445667777777999999887653

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=94.42  E-value=0.48  Score=44.05  Aligned_cols=98  Identities=17%  Similarity=0.001  Sum_probs=62.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee--cCCC-CCccHHHHHHHHcCCCccEEEEcc
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV--NTSE-HDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi--~~~~-~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      -+|.|+|+|.+|.+.+..+...|. .|.+.++++++.+.+++.+.....  ...- ..........+.. ...|+||-++
T Consensus         5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-~~aD~Vi~~v   82 (328)
T PRK14618          5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-AGADFAVVAV   82 (328)
T ss_pred             CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-cCCCEEEEEC
Confidence            369999999999999999888898 899999988887777654211100  0000 0000000111221 2589999999


Q ss_pred             CChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          267 GNIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       267 g~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ... .+...++.++++ -.++.+..
T Consensus        83 ~~~-~~~~v~~~l~~~-~~vi~~~~  105 (328)
T PRK14618         83 PSK-ALRETLAGLPRA-LGYVSCAK  105 (328)
T ss_pred             chH-HHHHHHHhcCcC-CEEEEEee
Confidence            884 567777888885 66665544

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=94.41  E-value=0.35  Score=41.61  Aligned_cols=80  Identities=23%  Similarity=0.219  Sum_probs=54.0

Q ss_pred             EEEEECCCHHHHHHHHHHHH--cCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          191 SVAVFGLGAVGLAAAEGARI--AGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~--~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      +|.|+|+|.+|...+.+.+.  ..++.+++.+++.+|...+.+ ++...+.+       +    .++. ..+|++++|.+
T Consensus         2 ~vgiVGcGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~~~s~-------i----de~~-~~~DlvVEaAS   69 (255)
T COG1712           2 KVGIVGCGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRRCVSD-------I----DELI-AEVDLVVEAAS   69 (255)
T ss_pred             eEEEEeccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCCCcccc-------H----HHHh-hccceeeeeCC
Confidence            47889999999999999983  467788999999888776544 44432211       1    1121 24677777777


Q ss_pred             ChHhHHHHHHHhhcC
Q 017336          268 NIDNMISAFECVHDG  282 (373)
Q Consensus       268 ~~~~~~~~~~~l~~~  282 (373)
                      ....-+...+.|+.+
T Consensus        70 ~~Av~e~~~~~L~~g   84 (255)
T COG1712          70 PEAVREYVPKILKAG   84 (255)
T ss_pred             HHHHHHHhHHHHhcC
Confidence            655556666777764

>PRK06484 short chain dehydrogenase; Validated

Probab=94.39  E-value=0.21  Score=49.59  Aligned_cols=79  Identities=27%  Similarity=0.394  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCce---eecCCCCCccHHHHHHHHc--CCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD---FVNTSEHDRPIQEVIAEMT--NGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~---vi~~~~~~~~~~~~~~~~~--~~~~d  260 (373)
                      +++++||+|+ +++|.+.++.+...|+ +|+.++++.++.+.+ ++++...   ..|..+.+ .+.+.+.+..  -+++|
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~iD   81 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSDEA-QIREGFEQLHREFGRID   81 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHH-HHHHHHHHHHHHhCCCC
Confidence            5789999987 8999999999999999 899998887776544 4455432   23333221 1222232221  13799


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      ++|++.|.
T Consensus        82 ~li~nag~   89 (520)
T PRK06484         82 VLVNNAGV   89 (520)
T ss_pred             EEEECCCc
Confidence            99999774

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=94.38  E-value=0.33  Score=45.86  Aligned_cols=35  Identities=29%  Similarity=0.427  Sum_probs=31.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      ...+|+|+|+|++|..++..+.+.|..+++.++.+
T Consensus        40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            35689999999999999999999999899999775

>TIGR02415 23BDH acetoin reductases

Probab=94.37  E-value=0.24  Score=43.82  Aligned_cols=77  Identities=22%  Similarity=0.259  Sum_probs=47.6

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHc--CCCc
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGV  259 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~~  259 (373)
                      +++||+|+ |.+|...++.+...|+ +|+.+.+++++.+.+    ++.+... .  .|..+.+ .+.+.+.+..  .++.
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKD-QVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHcCCC
Confidence            47899987 8999999999999999 788888876654332    2334322 1  2222211 1222222221  1268


Q ss_pred             cEEEEccCC
Q 017336          260 DRSVECTGN  268 (373)
Q Consensus       260 d~vid~~g~  268 (373)
                      |++|++.|.
T Consensus        79 d~vi~~ag~   87 (254)
T TIGR02415        79 DVMVNNAGV   87 (254)
T ss_pred             CEEEECCCc
Confidence            999998874

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=94.35  E-value=0.21  Score=49.58  Aligned_cols=71  Identities=24%  Similarity=0.308  Sum_probs=48.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      .++++||+|+|++|.+++..+...|+ +|+++.++.++.+.+. +++.. ++.       +.+ ..+......|++++++
T Consensus       378 ~~k~vlIlGaGGagrAia~~L~~~G~-~V~i~nR~~e~a~~la~~l~~~-~~~-------~~~-~~~~~~~~~diiINtT  447 (529)
T PLN02520        378 AGKLFVVIGAGGAGKALAYGAKEKGA-RVVIANRTYERAKELADAVGGQ-ALT-------LAD-LENFHPEEGMILANTT  447 (529)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCc-eee-------HhH-hhhhccccCeEEEecc
Confidence            46789999999999999999999999 8999999877766554 44432 221       111 1111122578999887


Q ss_pred             CC
Q 017336          267 GN  268 (373)
Q Consensus       267 g~  268 (373)
                      +-
T Consensus       448 ~v  449 (529)
T PLN02520        448 SV  449 (529)
T ss_pred             cC
Confidence            53

>PRK12743 oxidoreductase; Provisional

Probab=94.34  E-value=0.27  Score=43.72  Aligned_cols=78  Identities=18%  Similarity=0.147  Sum_probs=47.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEc-CChhHHHH----HHhcCCce-e--ecCCCCC--ccHHHHHHHHcCC
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEE----AKKFGVTD-F--VNTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~-~~~~~~~~----~~~lg~~~-v--i~~~~~~--~~~~~~~~~~~~~  257 (373)
                      ++++||+|+ |.+|..+++.+...|+ +|+.+. ++.++.+.    ++..+... .  .|..+..  ..+.+.+.+.. +
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL-G   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            578999987 8999999999999999 777664 34443332    23345432 2  2322211  01222233222 3


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|.+.|.
T Consensus        80 ~id~li~~ag~   90 (256)
T PRK12743         80 RIDVLVNNAGA   90 (256)
T ss_pred             CCCEEEECCCC
Confidence            68999998874

>PRK07791 short chain dehydrogenase; Provisional

Probab=94.33  E-value=0.31  Score=44.30  Aligned_cols=35  Identities=34%  Similarity=0.411  Sum_probs=29.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|++++++.
T Consensus         5 ~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~   40 (286)
T PRK07791          5 DGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGV   40 (286)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCc
Confidence            5789999987 8999999988888999 777776543

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=94.33  E-value=0.15  Score=45.73  Aligned_cols=76  Identities=21%  Similarity=0.268  Sum_probs=47.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-eecCCCCCccHHHHHHHHc--CCCccEEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMT--NGGVDRSV  263 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~-vi~~~~~~~~~~~~~~~~~--~~~~d~vi  263 (373)
                      .++++||+|+ |.+|.++++.+...|+ +|+.+++++++.+.   ..... ..|..+.. .+.+.+.+..  -+++|++|
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~id~li   82 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSSAE-EVNHTVAEIIEKFGRIDGLV   82 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence            4688999987 8999999999999999 88888776654321   11111 12322211 1222222221  13789999


Q ss_pred             EccCC
Q 017336          264 ECTGN  268 (373)
Q Consensus       264 d~~g~  268 (373)
                      ++.|.
T Consensus        83 ~~Ag~   87 (266)
T PRK06171         83 NNAGI   87 (266)
T ss_pred             ECCcc
Confidence            98873

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=94.30  E-value=0.35  Score=49.00  Aligned_cols=93  Identities=12%  Similarity=0.143  Sum_probs=65.9

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      .+|+|+|.|.+|+..++.++..|. .+++++.++++.+.+++.|...++- +..+   .+.+++.--..+|+++-+.+++
T Consensus       401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~G-Dat~---~~~L~~agi~~A~~vv~~~~d~  475 (601)
T PRK03659        401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYG-DATQ---LELLRAAGAEKAEAIVITCNEP  475 (601)
T ss_pred             CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEe-eCCC---HHHHHhcCCccCCEEEEEeCCH
Confidence            579999999999999999999998 8999999999999999988764432 2211   1234443223799999999885


Q ss_pred             HhHH---HHHHHhhcCCcEEEE
Q 017336          270 DNMI---SAFECVHDGWGVAVL  288 (373)
Q Consensus       270 ~~~~---~~~~~l~~~~g~~v~  288 (373)
                      +.-.   ...+.+.|+ -+++.
T Consensus       476 ~~n~~i~~~~r~~~p~-~~Iia  496 (601)
T PRK03659        476 EDTMKIVELCQQHFPH-LHILA  496 (601)
T ss_pred             HHHHHHHHHHHHHCCC-CeEEE
Confidence            4322   334445554 45544

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.29  E-value=0.27  Score=43.19  Aligned_cols=78  Identities=24%  Similarity=0.354  Sum_probs=47.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE-cCChhHHHHHH----hcCCce-ee--cCCCCCccHHHHHHHHcC--C
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEAK----KFGVTD-FV--NTSEHDRPIQEVIAEMTN--G  257 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~-~~~~~~~~~~~----~lg~~~-vi--~~~~~~~~~~~~~~~~~~--~  257 (373)
                      ++++||+|+ |.+|...+..+...|+ +|+.+ +++.++.+.+.    ..+... ++  |..+.+ .+.+.+.+...  +
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   82 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEE-DVENLVEQIVEKFG   82 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHhC
Confidence            468999987 8999998888888899 77777 78766654332    222221 22  222211 12222222211  3


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|.+.|.
T Consensus        83 ~id~vi~~ag~   93 (247)
T PRK05565         83 KIDILVNNAGI   93 (247)
T ss_pred             CCCEEEECCCc
Confidence            69999998874

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.28  E-value=0.28  Score=44.34  Aligned_cols=94  Identities=21%  Similarity=0.238  Sum_probs=63.9

Q ss_pred             cccchhhhhhhhhhccCC-CCCCEEEEECCC-HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCcc
Q 017336          169 LSCGVSTGLGATLNVAKP-ERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP  246 (373)
Q Consensus       169 ~~~~~~ta~~~l~~~~~~-~~~~~vlI~G~g-~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~  246 (373)
                      .||+....+. +++.-++ -.|++|+|+|.| .+|.-.+.++...|+ +|+++.+.                   ..+  
T Consensus       138 ~PcTp~aii~-lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~a-tVt~~hs~-------------------t~~--  194 (285)
T PRK14189        138 RPCTPYGVMK-MLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGA-TVTICHSK-------------------TRD--  194 (285)
T ss_pred             cCCCHHHHHH-HHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEecCC-------------------CCC--
Confidence            4544443333 2333343 378999999985 669999999999999 78776321                   111  


Q ss_pred             HHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          247 IQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       247 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +.+.+    . .+|+|+-++|.+.++..  +.++++ ..++.+|...
T Consensus       195 l~~~~----~-~ADIVV~avG~~~~i~~--~~ik~g-avVIDVGin~  233 (285)
T PRK14189        195 LAAHT----R-QADIVVAAVGKRNVLTA--DMVKPG-ATVIDVGMNR  233 (285)
T ss_pred             HHHHh----h-hCCEEEEcCCCcCccCH--HHcCCC-CEEEEccccc
Confidence            22222    2 47999999998776554  889997 8999888754

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=94.28  E-value=0.42  Score=46.27  Aligned_cols=103  Identities=14%  Similarity=0.202  Sum_probs=63.4

Q ss_pred             hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-e--ecCCCCCccHHHHHHHH
Q 017336          182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIAEM  254 (373)
Q Consensus       182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-v--i~~~~~~~~~~~~~~~~  254 (373)
                      ....++++++||=+|+|+ |..++++++.++..+|++++.++++.+.++    ++|... +  ++.+...  .. .  ..
T Consensus       232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~--~~-~--~~  305 (426)
T TIGR00563       232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRG--PS-Q--WA  305 (426)
T ss_pred             HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccccc--cc-c--cc
Confidence            345678899998887654 444455555555338999999999887664    456652 2  2111111  00 0  00


Q ss_pred             cCCCccEEEE---ccCC-------------------------hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          255 TNGGVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       255 ~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..+.||.||-   |+|.                         ...+..+++.|+++ |+++..-.
T Consensus       306 ~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystc  369 (426)
T TIGR00563       306 ENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATC  369 (426)
T ss_pred             cccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeC
Confidence            1236999874   4442                         24677899999997 99987544

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=94.27  E-value=0.35  Score=42.59  Aligned_cols=79  Identities=18%  Similarity=0.244  Sum_probs=46.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE-cCChh-HHHHHH---hcCCcee---ecCCCCCccHHHHHHHHc--C
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSK-RFEEAK---KFGVTDF---VNTSEHDRPIQEVIAEMT--N  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~-~~~~~-~~~~~~---~lg~~~v---i~~~~~~~~~~~~~~~~~--~  256 (373)
                      .++++||+|+ |.+|..+++.+...|+ +|+.. .+++. ..+.+.   +.+....   .|..+.. .+.+.+.+..  -
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~   79 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWD-STKAAFDKVKAEV   79 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHh
Confidence            3578999987 8999999999999999 66664 33332 222332   3344332   2222211 1222222221  1


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|+++++.|.
T Consensus        80 ~~id~li~~ag~   91 (246)
T PRK12938         80 GEIDVLVNNAGI   91 (246)
T ss_pred             CCCCEEEECCCC
Confidence            379999999875

>PRK08223 hypothetical protein; Validated

Probab=94.26  E-value=0.48  Score=42.87  Aligned_cols=35  Identities=31%  Similarity=0.304  Sum_probs=31.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      ...+|||+|+|++|..+++.+-+.|.+++..++.+
T Consensus        26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            35789999999999999999999999999888664

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=94.26  E-value=0.39  Score=44.01  Aligned_cols=44  Identities=20%  Similarity=0.332  Sum_probs=37.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT  235 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~  235 (373)
                      +|.|+|.|.+|...+.-+...|. +|++.++++++.+.+++.+..
T Consensus         2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~~   45 (298)
T TIGR00872         2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRTT   45 (298)
T ss_pred             EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCc
Confidence            58899999999988887778888 899999999998888876653

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.23  E-value=0.37  Score=44.30  Aligned_cols=78  Identities=24%  Similarity=0.293  Sum_probs=46.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh-hHHH----HHHhcCCceee---cCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFE----EAKKFGVTDFV---NTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~-~~~~----~~~~lg~~~vi---~~~~~~--~~~~~~~~~~~~  256 (373)
                      .++++||+|+ +++|...++.+...|+ +|+++++.. ++.+    .+++.|.....   |..+.+  ..+.+.+.+  -
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~--~   87 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG--L   87 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH--h
Confidence            4688999987 8999999988888899 788876542 2222    22334443221   221111  012222222  2


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|++.|.
T Consensus        88 g~iD~li~nAG~   99 (306)
T PRK07792         88 GGLDIVVNNAGI   99 (306)
T ss_pred             CCCCEEEECCCC
Confidence            479999998874

>PRK03612 spermidine synthase; Provisional

Probab=94.22  E-value=0.39  Score=47.69  Aligned_cols=98  Identities=17%  Similarity=0.116  Sum_probs=62.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC-C----------ceeecCCCCCccHHHHHHHHc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-V----------TDFVNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg-~----------~~vi~~~~~~~~~~~~~~~~~  255 (373)
                      ++.++||++|+|. |..+..+++.-...+|++++.+++-.+.+++.. .          +.+ +....|  ..+.+++ .
T Consensus       296 ~~~~rVL~IG~G~-G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv-~vi~~D--a~~~l~~-~  370 (521)
T PRK03612        296 ARPRRVLVLGGGD-GLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRV-TVVNDD--AFNWLRK-L  370 (521)
T ss_pred             CCCCeEEEEcCCc-cHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCce-EEEECh--HHHHHHh-C
Confidence            4568999998863 556666676544359999999999999888721 1          111 000111  3333333 2


Q ss_pred             CCCccEEEEccCCh-----------HhHHHHHHHhhcCCcEEEEEc
Q 017336          256 NGGVDRSVECTGNI-----------DNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       256 ~~~~d~vid~~g~~-----------~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      .+++|+|+--...+           ++++.+.+.|+++ |.++.-.
T Consensus       371 ~~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pg-G~lv~~~  415 (521)
T PRK03612        371 AEKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPD-GLLVVQS  415 (521)
T ss_pred             CCCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCC-eEEEEec
Confidence            34899987643321           3677889999997 9988653

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=94.21  E-value=0.37  Score=42.30  Aligned_cols=79  Identities=28%  Similarity=0.334  Sum_probs=46.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh-HHH-H---HHhcCCce-ee--cCCCCCccHHHHHHHHcC--
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RFE-E---AKKFGVTD-FV--NTSEHDRPIQEVIAEMTN--  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~-~~~-~---~~~lg~~~-vi--~~~~~~~~~~~~~~~~~~--  256 (373)
                      .++++||+|+ |.+|...+..+...|+ +|+++.++.. +.+ .   ++..+... ++  |..+.+ .+.+.+.+...  
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~   81 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAE-SVERAVDEAKAEF   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            3578999987 8999999999999999 6766655543 222 2   22233322 22  222211 12222222221  


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|.+.|.
T Consensus        82 ~~id~vi~~ag~   93 (248)
T PRK05557         82 GGVDILVNNAGI   93 (248)
T ss_pred             CCCCEEEECCCc
Confidence            268999998874

>PLN02928 oxidoreductase family protein

Probab=94.17  E-value=0.32  Score=45.57  Aligned_cols=96  Identities=21%  Similarity=0.296  Sum_probs=58.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC-----ceeecCCCCCccHHHHHHHHcCCCccEE
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-----TDFVNTSEHDRPIQEVIAEMTNGGVDRS  262 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~-----~~vi~~~~~~~~~~~~~~~~~~~~~d~v  262 (373)
                      .|+++.|+|.|.+|..+++.++.+|+ +|++.+++..+.. ...++.     ....+......++.    ++.. ..|+|
T Consensus       158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~----ell~-~aDiV  230 (347)
T PLN02928        158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEP-EDGLLIPNGDVDDLVDEKGGHEDIY----EFAG-EADIV  230 (347)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhh-hhhhccccccccccccccCcccCHH----HHHh-hCCEE
Confidence            57899999999999999999999999 8999987633211 111110     00000000000122    2222 46898


Q ss_pred             EEccCChH-----hHHHHHHHhhcCCcEEEEEcC
Q 017336          263 VECTGNID-----NMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       263 id~~g~~~-----~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      +.++....     +-...+..|+++ ..+|.++-
T Consensus       231 vl~lPlt~~T~~li~~~~l~~Mk~g-a~lINvaR  263 (347)
T PLN02928        231 VLCCTLTKETAGIVNDEFLSSMKKG-ALLVNIAR  263 (347)
T ss_pred             EECCCCChHhhcccCHHHHhcCCCC-eEEEECCC
Confidence            88876321     223677888886 88877764

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=94.16  E-value=0.32  Score=44.69  Aligned_cols=44  Identities=27%  Similarity=0.447  Sum_probs=37.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT  235 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~  235 (373)
                      +|.++|.|.+|...+.-+...|. +|++.++++++.+.+.+.|+.
T Consensus         2 ~Ig~IGlG~MG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~~   45 (301)
T PRK09599          2 QLGMIGLGRMGGNMARRLLRGGH-EVVGYDRNPEAVEALAEEGAT   45 (301)
T ss_pred             EEEEEcccHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCe
Confidence            58899999999988888888898 899999999988887777653

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=94.16  E-value=0.58  Score=40.76  Aligned_cols=101  Identities=19%  Similarity=0.115  Sum_probs=59.5

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCceeec-------CCCCCcc-HHHHHHHH-
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVN-------TSEHDRP-IQEVIAEM-  254 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~vi~-------~~~~~~~-~~~~~~~~-  254 (373)
                      .+.++.+||+.|+|. |.-++-||. .|+ .|++++.++...+.+ ++.+......       +...+-. +...+.+. 
T Consensus        34 ~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~  110 (218)
T PRK13255         34 ALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALT  110 (218)
T ss_pred             CCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCC
Confidence            445678999999875 666666664 699 899999999887765 3333221000       0000000 00001111 


Q ss_pred             --cCCCccEEEEccC--------ChHhHHHHHHHhhcCCcEEEEE
Q 017336          255 --TNGGVDRSVECTG--------NIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       255 --~~~~~d~vid~~g--------~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                        ..+.||.|+|...        ....+....++|+++ |+++++
T Consensus       111 ~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~  154 (218)
T PRK13255        111 AADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV  154 (218)
T ss_pred             cccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence              1126899999653        124578899999997 875554

>PRK06940 short chain dehydrogenase; Provisional

Probab=94.15  E-value=0.38  Score=43.46  Aligned_cols=77  Identities=27%  Similarity=0.394  Sum_probs=47.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHH-cCCCcc
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEM-TNGGVD  260 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~-~~~~~d  260 (373)
                      ++++||+|+|++|..++..+. .|+ +|+.+++++++.+.+    ++.+... .  .|..+.+ .+.+.+.+. ..+++|
T Consensus         2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~-~i~~~~~~~~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRE-SVKALAATAQTLGPVT   78 (275)
T ss_pred             CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHH-HHHHHHHHHHhcCCCC
Confidence            467889999999999888875 788 899888887655433    2224322 1  2333221 122223222 114799


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      ++|++.|.
T Consensus        79 ~li~nAG~   86 (275)
T PRK06940         79 GLVHTAGV   86 (275)
T ss_pred             EEEECCCc
Confidence            99999874

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=94.13  E-value=0.31  Score=45.09  Aligned_cols=37  Identities=19%  Similarity=0.155  Sum_probs=30.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR  225 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~  225 (373)
                      .+++|||+|+ |.+|...+..+...|. +|+++.++.++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~   41 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTD   41 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcc
Confidence            4689999987 9999999998888898 78877676554

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=94.13  E-value=0.46  Score=34.53  Aligned_cols=35  Identities=31%  Similarity=0.490  Sum_probs=29.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcC
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR  221 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~  221 (373)
                      -.+++++|+|+|.+|..+++.+...+..++.+.++
T Consensus        21 ~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          21 LKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            45789999999999999999999886557877765

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=94.12  E-value=1.4  Score=38.09  Aligned_cols=117  Identities=18%  Similarity=0.101  Sum_probs=66.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh-hHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~-~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      .+++|||+|+|.+|.-=+.++...|+ +|++++.+. +....+.+-+--..+. ...+      . +.. .++++||-++
T Consensus        11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~~~~-~~~~------~-~~~-~~~~lviaAt   80 (210)
T COG1648          11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIKWIE-REFD------A-EDL-DDAFLVIAAT   80 (210)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcchhh-cccC------h-hhh-cCceEEEEeC
Confidence            56899999999999999999999999 788886554 2222222222211111 1111      0 011 1489999999


Q ss_pred             CChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEe
Q 017336          267 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTF  315 (373)
Q Consensus       267 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~  315 (373)
                      +.++.-+...+..... +.++...+......+.++...-...+.+.-+.
T Consensus        81 ~d~~ln~~i~~~a~~~-~i~vNv~D~p~~~~f~~Pa~~~r~~l~iaIsT  128 (210)
T COG1648          81 DDEELNERIAKAARER-RILVNVVDDPELCDFIFPAIVDRGPLQIAIST  128 (210)
T ss_pred             CCHHHHHHHHHHHHHh-CCceeccCCcccCceecceeeccCCeEEEEEC
Confidence            9855555555555554 77776655443223333322112445554333

>PRK12747 short chain dehydrogenase; Provisional

Probab=94.10  E-value=0.97  Score=39.97  Aligned_cols=104  Identities=17%  Similarity=0.165  Sum_probs=60.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEc-CChhHHHH-HH---hcCCcee---ecCCCCC--ccHHHHHHH---
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEE-AK---KFGVTDF---VNTSEHD--RPIQEVIAE---  253 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~-~~~~~~~~-~~---~lg~~~v---i~~~~~~--~~~~~~~~~---  253 (373)
                      .++++||+|+ |.+|.++++.+...|+ +|+.+. +++++.+. ..   +.+....   .|..+.+  ..+.+.+.+   
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            4689999987 8999999999999999 677653 44443332 22   2232211   1222211  112222222   


Q ss_pred             -HcC-CCccEEEEccCCh----------H---------------hHHHHHHHhhcCCcEEEEEcCCC
Q 017336          254 -MTN-GGVDRSVECTGNI----------D---------------NMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       254 -~~~-~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                       ..+ +++|+++++.|..          +               ....+++.+... |+++.++...
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-g~iv~isS~~  147 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-SRIINISSAA  147 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC-CeEEEECCcc
Confidence             112 2799999988731          0               112345566665 8999888754

>PRK09135 pteridine reductase; Provisional

Probab=94.10  E-value=0.37  Score=42.40  Aligned_cols=34  Identities=21%  Similarity=0.150  Sum_probs=29.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      .++++||+|+ |.+|..++..+...|+ +|++++++
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~   39 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHR   39 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCC
Confidence            4578999997 8999999988888899 88888775

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.09  E-value=0.21  Score=41.15  Aligned_cols=44  Identities=30%  Similarity=0.341  Sum_probs=37.5

Q ss_pred             CCCEEEEECCC-HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc
Q 017336          188 RGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF  232 (373)
Q Consensus       188 ~~~~vlI~G~g-~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l  232 (373)
                      .|..|+++|+| ++|...++-+...|+ +|+++.+.++.+.-+-+.
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e   50 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKE   50 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhh
Confidence            46789999985 999999999999999 899999999887766544

>PRK13303 L-aspartate dehydrogenase; Provisional

Probab=94.06  E-value=0.3  Score=43.94  Aligned_cols=86  Identities=20%  Similarity=0.183  Sum_probs=51.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHhcCCc-eeecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          191 SVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~~~~lg~~-~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      +|.|+|+|.+|...++..... +.+-+.++.+........+.++.. .++  .        .+.++ ...+|+|++|++.
T Consensus         3 rVgIiG~G~iG~~~~~~l~~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~--~--------d~~~l-~~~~DvVve~t~~   71 (265)
T PRK13303          3 KVAMIGFGAIGAAVLELLEHDPDLRVDWVIVPEHSIDAVRRALGEAVRVV--S--------SVDAL-PQRPDLVVECAGH   71 (265)
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCceEEEEEEcCCCHHHHhhhhccCCeee--C--------CHHHh-ccCCCEEEECCCH
Confidence            689999999999988877655 453233332322221222223211 111  1        12223 2478999999998


Q ss_pred             hHhHHHHHHHhhcCCcEEEE
Q 017336          269 IDNMISAFECVHDGWGVAVL  288 (373)
Q Consensus       269 ~~~~~~~~~~l~~~~g~~v~  288 (373)
                      ..+.+.+.++|..+ -.++.
T Consensus        72 ~~~~e~~~~aL~aG-k~Vvi   90 (265)
T PRK13303         72 AALKEHVVPILKAG-IDCAV   90 (265)
T ss_pred             HHHHHHHHHHHHcC-CCEEE
Confidence            77888999999885 45544

>PRK07775 short chain dehydrogenase; Provisional

Probab=94.06  E-value=0.54  Score=42.33  Aligned_cols=79  Identities=20%  Similarity=0.261  Sum_probs=48.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-ee--cCCCCCccHHHHHHHHc--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT--NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-vi--~~~~~~~~~~~~~~~~~--~~  257 (373)
                      +.+++||+|+ |.+|...+..+...|+ +|+++.++.++.+.+    +..+... ++  |..+.. .+.+.+.+..  -+
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~   86 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPD-SVKSFVAQAEEALG   86 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHhcC
Confidence            3468999987 8999999998888899 788887776554332    2234332 11  222211 1222222211  13


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|.+.|.
T Consensus        87 ~id~vi~~Ag~   97 (274)
T PRK07775         87 EIEVLVSGAGD   97 (274)
T ss_pred             CCCEEEECCCc
Confidence            68999998874

>PRK04266 fibrillarin; Provisional

Probab=94.06  E-value=0.9  Score=39.80  Aligned_cols=101  Identities=17%  Similarity=0.183  Sum_probs=61.2

Q ss_pred             hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc-----CCceeecCCCCCccHHHHHHHHcC
Q 017336          182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-----GVTDFVNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l-----g~~~vi~~~~~~~~~~~~~~~~~~  256 (373)
                      +...++++++||=+|+|. |..+..+++..+..+|++++.+++..+.+.+.     ++. .+.-+...  . .....+ .
T Consensus        66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~-~i~~D~~~--~-~~~~~l-~  139 (226)
T PRK04266         66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNII-PILADARK--P-ERYAHV-V  139 (226)
T ss_pred             hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcE-EEECCCCC--c-chhhhc-c
Confidence            357888999998888754 44555666666434899999999776644332     221 22111111  0 000011 1


Q ss_pred             CCccEEEEccCChH----hHHHHHHHhhcCCcEEEEE
Q 017336          257 GGVDRSVECTGNID----NMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       257 ~~~d~vid~~g~~~----~~~~~~~~l~~~~g~~v~~  289 (373)
                      +.+|+|+.....+.    .+..+.+.|+++ |++++.
T Consensus       140 ~~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~  175 (226)
T PRK04266        140 EKVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA  175 (226)
T ss_pred             ccCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence            36999996544322    367888899997 998874

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=94.05  E-value=0.38  Score=42.92  Aligned_cols=103  Identities=20%  Similarity=0.199  Sum_probs=59.5

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCcEEEEEcCCh------hHHHHHHhcCCc-ee--ecCCCCC--ccHHHHHHH
Q 017336          188 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSS------KRFEEAKKFGVT-DF--VNTSEHD--RPIQEVIAE  253 (373)
Q Consensus       188 ~~~~vlI~G~---g~~G~~ai~la~~~g~~~V~~~~~~~------~~~~~~~~lg~~-~v--i~~~~~~--~~~~~~~~~  253 (373)
                      .++++||+|+   +++|.+++..+...|+ +|+.+.++.      +..+.+++.+.. ..  .|..+.+  ..+.+.+.+
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   83 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ   83 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence            4689999986   4899999988888999 777664332      222333222211 12  2322221  112223333


Q ss_pred             HcCCCccEEEEccCCh-------H----------------------hHHHHHHHhhcCCcEEEEEcCCC
Q 017336          254 MTNGGVDRSVECTGNI-------D----------------------NMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       254 ~~~~~~d~vid~~g~~-------~----------------------~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      .. +++|+++++.|..       .                      .....+..|..+ |+++.++...
T Consensus        84 ~~-g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~~  150 (258)
T PRK07370         84 KW-GKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYLG  150 (258)
T ss_pred             Hc-CCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEeccc
Confidence            22 3799999998731       1                      123456667775 8988887643

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=94.04  E-value=0.18  Score=45.88  Aligned_cols=36  Identities=22%  Similarity=0.407  Sum_probs=30.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      .++++||+|+|+.+.+++..+...|+.+++++.|++
T Consensus       123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~  158 (288)
T PRK12749        123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD  158 (288)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            568999999998899877777788988999999984

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=94.00  E-value=0.69  Score=39.62  Aligned_cols=34  Identities=32%  Similarity=0.474  Sum_probs=30.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      ..+|+|+|+|++|...+..+-..|.++++.++.+
T Consensus        19 ~s~VlviG~gglGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          19 SAKVLIIGAGALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             hCcEEEECCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence            4789999999999999999999999989888654

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK10637 cysG siroheme synthase; Provisional

Probab=93.97  E-value=1.5  Score=42.77  Aligned_cols=117  Identities=17%  Similarity=0.083  Sum_probs=66.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh-hHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~-~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      .+++|||+|+|.++.-=++.+...|+ +|++++..- +....+.+.|--..+. .+...   +.+     .++++||-++
T Consensus        11 ~~~~vlvvGgG~vA~rk~~~ll~~ga-~v~visp~~~~~~~~l~~~~~i~~~~-~~~~~---~dl-----~~~~lv~~at   80 (457)
T PRK10637         11 RDRDCLLVGGGDVAERKARLLLDAGA-RLTVNALAFIPQFTAWADAGMLTLVE-GPFDE---SLL-----DTCWLAIAAT   80 (457)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHhCCCEEEEe-CCCCh---HHh-----CCCEEEEECC
Confidence            56899999999999887788888899 788885431 2222222222212221 11110   111     2689999999


Q ss_pred             CChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEe
Q 017336          267 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTF  315 (373)
Q Consensus       267 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~  315 (373)
                      +.++.-....+..+.. +.++...+......+.++...-...+++--+.
T Consensus        81 ~d~~~n~~i~~~a~~~-~~lvN~~d~~~~~~f~~pa~~~~g~l~iaisT  128 (457)
T PRK10637         81 DDDAVNQRVSEAAEAR-RIFCNVVDAPKAASFIMPSIIDRSPLMVAVSS  128 (457)
T ss_pred             CCHHHhHHHHHHHHHc-CcEEEECCCcccCeEEEeeEEecCCEEEEEEC
Confidence            9854444444444453 77777766543444444333222445554333

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=93.95  E-value=0.3  Score=44.73  Aligned_cols=83  Identities=18%  Similarity=0.217  Sum_probs=52.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCC---ccHHHHHHHHcCCCccEEEEccC
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD---RPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~---~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      +|+|+|+|.+|.+.+..+...|. .|+.+++++++.+.+++-|...  + +...   ........+.  ..+|+||-++.
T Consensus         2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~-~~~~~~~~~~~~~~~~~--~~~d~vila~k   75 (304)
T PRK06522          2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--E-DGEITVPVLAADDPAEL--GPQDLVILAVK   75 (304)
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--c-CCceeecccCCCChhHc--CCCCEEEEecc
Confidence            58999999999988888888887 7999988888877777655421  0 0000   0000111111  37899999987


Q ss_pred             ChHhHHHHHHHhh
Q 017336          268 NIDNMISAFECVH  280 (373)
Q Consensus       268 ~~~~~~~~~~~l~  280 (373)
                      .. ....+++.++
T Consensus        76 ~~-~~~~~~~~l~   87 (304)
T PRK06522         76 AY-QLPAALPSLA   87 (304)
T ss_pred             cc-cHHHHHHHHh
Confidence            63 3344444444

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=93.93  E-value=0.47  Score=42.97  Aligned_cols=77  Identities=18%  Similarity=0.170  Sum_probs=45.3

Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c----C---CceeecCCCCCccHHHHHHHHcCC-CccE
Q 017336          192 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----G---VTDFVNTSEHDRPIQEVIAEMTNG-GVDR  261 (373)
Q Consensus       192 vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-l----g---~~~vi~~~~~~~~~~~~~~~~~~~-~~d~  261 (373)
                      |||+|+ |.+|...+.-+...+..+++.+++++.++..++. +    .   ....+..--.+-.-.+.+.+.... ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            799987 9999998888888888799999999988776643 4    1   111111111111123455565555 8999


Q ss_pred             EEEccCC
Q 017336          262 SVECTGN  268 (373)
Q Consensus       262 vid~~g~  268 (373)
                      ||.+..-
T Consensus        81 VfHaAA~   87 (293)
T PF02719_consen   81 VFHAAAL   87 (293)
T ss_dssp             EEE----
T ss_pred             EEEChhc
Confidence            9998763

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=93.92  E-value=0.6  Score=43.46  Aligned_cols=86  Identities=21%  Similarity=0.212  Sum_probs=57.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .+++|.|+|.|.+|...++.++.+|. +|++.+++.+.....    ..    +.. +  +.    +... ..|+|+.++.
T Consensus       145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~----~~----~~~-~--l~----ell~-~aDiVil~lP  207 (330)
T PRK12480        145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF----LT----YKD-S--VK----EAIK-DADIISLHVP  207 (330)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh----hh----ccC-C--HH----HHHh-cCCEEEEeCC
Confidence            56789999999999999999999999 899998876542211    00    100 1  22    2221 5789888877


Q ss_pred             ChH-----hHHHHHHHhhcCCcEEEEEcC
Q 017336          268 NID-----NMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       268 ~~~-----~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ...     +....+..|+++ ..+|.++.
T Consensus       208 ~t~~t~~li~~~~l~~mk~g-avlIN~aR  235 (330)
T PRK12480        208 ANKESYHLFDKAMFDHVKKG-AILVNAAR  235 (330)
T ss_pred             CcHHHHHHHhHHHHhcCCCC-cEEEEcCC
Confidence            542     233566777776 77776654

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.92  E-value=0.39  Score=42.15  Aligned_cols=77  Identities=23%  Similarity=0.296  Sum_probs=44.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG  257 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~-~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~  257 (373)
                      .++|||+|+ |.+|...++.+...|+ +|+++.+ +++..+.+    +..+... +  .|..+.+ .+.+.+.+..  .+
T Consensus         6 ~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~~   83 (249)
T PRK12825          6 GRVALVTGAARGLGRAIALRLARAGA-DVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKA-ALEAAVAAAVERFG   83 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHH-HHHHHHHHHHHHcC
Confidence            478999998 9999999999999999 5655444 34333322    2233221 2  2222211 1222222221  13


Q ss_pred             CccEEEEccC
Q 017336          258 GVDRSVECTG  267 (373)
Q Consensus       258 ~~d~vid~~g  267 (373)
                      ++|++|.+.|
T Consensus        84 ~id~vi~~ag   93 (249)
T PRK12825         84 RIDILVNNAG   93 (249)
T ss_pred             CCCEEEECCc
Confidence            7999999887

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=93.91  E-value=2.1  Score=38.97  Aligned_cols=61  Identities=20%  Similarity=0.173  Sum_probs=45.5

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEc--CChhHHHHHHhcCCceeecCC
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD--RSSKRFEEAKKFGVTDFVNTS  241 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~--~~~~~~~~~~~lg~~~vi~~~  241 (373)
                      .....++||.+|+=--+|.+|.+.+.+|+.+|++-++++.  -+.+|++.++.+|+..+....
T Consensus        54 e~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~  116 (300)
T COG0031          54 EKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG  116 (300)
T ss_pred             HHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence            3456799999544434599999999999999995444442  367899999999998765544

>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]

Probab=93.89  E-value=0.26  Score=45.29  Aligned_cols=88  Identities=18%  Similarity=0.212  Sum_probs=50.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  270 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  270 (373)
                      +|+|+|+|++|.+....+.+.| ..|..+.+++. .+.+++-|....-..................+.+|+||-++=. .
T Consensus         2 kI~IlGaGAvG~l~g~~L~~~g-~~V~~~~R~~~-~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~~~~Dlviv~vKa-~   78 (307)
T COG1893           2 KILILGAGAIGSLLGARLAKAG-HDVTLLVRSRR-LEALKKKGLRIEDEGGNFTTPVVAATDAEALGPADLVIVTVKA-Y   78 (307)
T ss_pred             eEEEECCcHHHHHHHHHHHhCC-CeEEEEecHHH-HHHHHhCCeEEecCCCccccccccccChhhcCCCCEEEEEecc-c
Confidence            6899999999999988888888 47888866655 6777776653221111000000000111112278999987754 3


Q ss_pred             hHHHHHHHhhc
Q 017336          271 NMISAFECVHD  281 (373)
Q Consensus       271 ~~~~~~~~l~~  281 (373)
                      ..+.+++.+.+
T Consensus        79 q~~~al~~l~~   89 (307)
T COG1893          79 QLEEALPSLAP   89 (307)
T ss_pred             cHHHHHHHhhh
Confidence            33444444443

>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional

Probab=93.89  E-value=0.21  Score=53.18  Aligned_cols=78  Identities=19%  Similarity=0.177  Sum_probs=52.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh---------------------hHHHHHHhcCCceeecCCCCCc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRFEEAKKFGVTDFVNTSEHDR  245 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~---------------------~~~~~~~~lg~~~vi~~~~~~~  245 (373)
                      ..+++|+|+|+|+.|+.++..+.+.|. .|++.++.+                     ...+.++++|++...+..-...
T Consensus       304 ~~gkkVaVIGsGPAGLsaA~~Lar~G~-~VtVfE~~~~~GG~l~yGIP~~rlp~~vi~~~i~~l~~~Gv~f~~n~~vG~d  382 (944)
T PRK12779        304 AVKPPIAVVGSGPSGLINAYLLAVEGF-PVTVFEAFHDLGGVLRYGIPEFRLPNQLIDDVVEKIKLLGGRFVKNFVVGKT  382 (944)
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEeeCCCCCceEEccCCCCcChHHHHHHHHHHHHhhcCeEEEeEEeccE
Confidence            358999999999999999999999999 788887643                     2345566778765433221110


Q ss_pred             cHHHHHHHHcCCCccEEEEccCC
Q 017336          246 PIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       246 ~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      -.   +.++...++|.||-++|.
T Consensus       383 it---~~~l~~~~yDAV~LAtGA  402 (944)
T PRK12779        383 AT---LEDLKAAGFWKIFVGTGA  402 (944)
T ss_pred             Ee---HHHhccccCCEEEEeCCC
Confidence            01   122222268999999886

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.88  E-value=0.47  Score=41.94  Aligned_cols=77  Identities=19%  Similarity=0.218  Sum_probs=45.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEc-CChhHHHHH-HhcCCce-e--ecCCCCCccHHHHH---HHHcCCCc
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEEA-KKFGVTD-F--VNTSEHDRPIQEVI---AEMTNGGV  259 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~-~~~~~~~~~-~~lg~~~-v--i~~~~~~~~~~~~~---~~~~~~~~  259 (373)
                      ++++||+|+ |.+|..++..+...|+ +|+.+. +++++.+.+ .+++... +  .|..+.+ .+.+.+   .+..+.++
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~~i   82 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGA-RVVVNYHQSEDAAEALADELGDRAIALQADVTDRE-QVQAMFATATEHFGKPI   82 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHH-HHHHHHHHHHHHhCCCC
Confidence            578999987 8999999998888999 676653 344444333 3343221 1  2322211 122222   23333249


Q ss_pred             cEEEEccC
Q 017336          260 DRSVECTG  267 (373)
Q Consensus       260 d~vid~~g  267 (373)
                      |++|.+.|
T Consensus        83 d~li~~ag   90 (253)
T PRK08642         83 TTVVNNAL   90 (253)
T ss_pred             eEEEECCC
Confidence            99999875

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=93.85  E-value=0.4  Score=41.98  Aligned_cols=77  Identities=21%  Similarity=0.260  Sum_probs=45.1

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHHHH-HHh---cCCce-e--ecCCCCCccHHHHHHHHc--CCC
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEE-AKK---FGVTD-F--VNTSEHDRPIQEVIAEMT--NGG  258 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~-~~~~~~~-~~~---lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~  258 (373)
                      +++||+|+ |.+|...+..+...|+ +|+++.+ ++++.+. ..+   .+... .  .|..+.. .+.+.+.+..  .++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFE-SCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHH-HHHHHHHHHHHHcCC
Confidence            47899987 8999999999999999 7777766 4443322 222   22211 1  2222211 1222222221  136


Q ss_pred             ccEEEEccCC
Q 017336          259 VDRSVECTGN  268 (373)
Q Consensus       259 ~d~vid~~g~  268 (373)
                      +|+||.+.|.
T Consensus        79 id~vi~~ag~   88 (242)
T TIGR01829        79 IDVLVNNAGI   88 (242)
T ss_pred             CcEEEECCCC
Confidence            8999999874

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=93.85  E-value=0.27  Score=40.41  Aligned_cols=94  Identities=23%  Similarity=0.268  Sum_probs=54.3

Q ss_pred             cccchhhhhhhhhhccC-CCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCcc
Q 017336          169 LSCGVSTGLGATLNVAK-PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP  246 (373)
Q Consensus       169 ~~~~~~ta~~~l~~~~~-~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~  246 (373)
                      +||+....+.. ++..+ --.|++|+|+|. ..+|.-...++...|+ .|..+.+..+.                     
T Consensus        16 ~PcTp~aii~l-L~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~a-tVt~~h~~T~~---------------------   72 (160)
T PF02882_consen   16 VPCTPLAIIEL-LEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGA-TVTICHSKTKN---------------------   72 (160)
T ss_dssp             --HHHHHHHHH-HHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT--EEEEE-TTSSS---------------------
T ss_pred             cCCCHHHHHHH-HHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCC-eEEeccCCCCc---------------------
Confidence            44443333333 33333 347899999997 5899999999999999 78777443211                     


Q ss_pred             HHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          247 IQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       247 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +.    +.+. .+|+|+.++|.+.++.  -+.++++ ..++.+|...
T Consensus        73 l~----~~~~-~ADIVVsa~G~~~~i~--~~~ik~g-avVIDvG~~~  111 (160)
T PF02882_consen   73 LQ----EITR-RADIVVSAVGKPNLIK--ADWIKPG-AVVIDVGINY  111 (160)
T ss_dssp             HH----HHHT-TSSEEEE-SSSTT-B---GGGS-TT-EEEEE--CEE
T ss_pred             cc----ceee-eccEEeeeeccccccc--cccccCC-cEEEecCCcc
Confidence            21    1222 5799999999876654  3478886 8888887653

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=93.83  E-value=1.2  Score=39.97  Aligned_cols=101  Identities=21%  Similarity=0.266  Sum_probs=62.0

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHH----hcCCceeecCCCCCccHHHHHHHHcCCC
Q 017336          184 AKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMTNGG  258 (373)
Q Consensus       184 ~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~----~lg~~~vi~~~~~~~~~~~~~~~~~~~~  258 (373)
                      ..++++++||=+|+|+ |..++.++..++ ...|++++.++++.+.++    .+|...+..... +  .. .+.. ..+.
T Consensus        67 l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~-D--~~-~~~~-~~~~  140 (264)
T TIGR00446        67 LEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNF-D--GR-VFGA-AVPK  140 (264)
T ss_pred             hCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecC-C--HH-Hhhh-hccC
Confidence            4567888888887754 444555555553 238999999999887764    456654321111 1  11 1111 1236


Q ss_pred             ccEEEE---ccCC-------------------------hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          259 VDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       259 ~d~vid---~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ||+|+-   |+|.                         .+.+..+++.|+++ |+++..-.
T Consensus       141 fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvYstc  200 (264)
T TIGR00446       141 FDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPG-GVLVYSTC  200 (264)
T ss_pred             CCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEeC
Confidence            999874   3442                         13677889999997 98876543

>PRK06701 short chain dehydrogenase; Provisional

Probab=93.81  E-value=0.48  Score=43.17  Aligned_cols=79  Identities=22%  Similarity=0.213  Sum_probs=47.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH-H----HHHHhcCCce-ee--cCCCCCccHHHHHHHHc--C
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-F----EEAKKFGVTD-FV--NTSEHDRPIQEVIAEMT--N  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~-~----~~~~~lg~~~-vi--~~~~~~~~~~~~~~~~~--~  256 (373)
                      +++++||+|+ |.+|..++..+...|+ +|+.+.++.++ .    +.++..+... ++  |..+.+ .+.+.+.+..  .
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~i~~~~  122 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEA-FCKDAVEETVREL  122 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHc
Confidence            4789999997 8999999988888899 78888765422 1    2223334322 22  222211 1222222211  1


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|.+.|.
T Consensus       123 ~~iD~lI~~Ag~  134 (290)
T PRK06701        123 GRLDILVNNAAF  134 (290)
T ss_pred             CCCCEEEECCcc
Confidence            378999998774

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=93.76  E-value=0.69  Score=44.20  Aligned_cols=35  Identities=23%  Similarity=0.251  Sum_probs=30.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      ...+|||+|+|++|..++..+-+.|.+++..++.+
T Consensus        41 ~~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D   75 (392)
T PRK07878         41 KNARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFD   75 (392)
T ss_pred             hcCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCC
Confidence            35689999999999999999999999999888754

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=93.75  E-value=1.2  Score=36.57  Aligned_cols=87  Identities=22%  Similarity=0.282  Sum_probs=53.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh-hHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~-~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      ++++|.|+|-|.-|++-.+=+|-.|. .|++..+.. ...+.+++-|....        +..+.++     ..|+|+-.+
T Consensus         3 ~~k~IAViGyGsQG~a~AlNLrDSG~-~V~Vglr~~s~s~~~A~~~Gf~v~--------~~~eAv~-----~aDvV~~L~   68 (165)
T PF07991_consen    3 KGKTIAVIGYGSQGHAHALNLRDSGV-NVIVGLREGSASWEKAKADGFEVM--------SVAEAVK-----KADVVMLLL   68 (165)
T ss_dssp             CTSEEEEES-SHHHHHHHHHHHHCC--EEEEEE-TTCHHHHHHHHTT-ECC--------EHHHHHH-----C-SEEEE-S
T ss_pred             CCCEEEEECCChHHHHHHHHHHhCCC-CEEEEecCCCcCHHHHHHCCCeec--------cHHHHHh-----hCCEEEEeC
Confidence            47899999999999999999999999 555554554 48888888887532        1333332     479999988


Q ss_pred             CCh---HhH-HHHHHHhhcCCcEEEEEc
Q 017336          267 GNI---DNM-ISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       267 g~~---~~~-~~~~~~l~~~~g~~v~~g  290 (373)
                      ...   +.+ +.....|+++  ....+.
T Consensus        69 PD~~q~~vy~~~I~p~l~~G--~~L~fa   94 (165)
T PF07991_consen   69 PDEVQPEVYEEEIAPNLKPG--ATLVFA   94 (165)
T ss_dssp             -HHHHHHHHHHHHHHHS-TT---EEEES
T ss_pred             ChHHHHHHHHHHHHhhCCCC--CEEEeC
Confidence            652   233 3445677774  444443

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=93.75  E-value=0.38  Score=44.12  Aligned_cols=43  Identities=30%  Similarity=0.541  Sum_probs=36.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  234 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~  234 (373)
                      +|.++|.|.+|...+.-+...|. .|++.++++++.+.+++.|+
T Consensus         2 ~Ig~IGlG~mG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~   44 (299)
T PRK12490          2 KLGLIGLGKMGGNMAERLREDGH-EVVGYDVNQEAVDVAGKLGI   44 (299)
T ss_pred             EEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCC
Confidence            57889999999988888888888 78999999988888877775

>PRK06849 hypothetical protein; Provisional

Probab=93.74  E-value=0.61  Score=44.53  Aligned_cols=93  Identities=13%  Similarity=0.060  Sum_probs=57.8

Q ss_pred             CCCEEEEECCC-HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce--eec-CCCCCccHHHHHHHHcCC-CccEE
Q 017336          188 RGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVN-TSEHDRPIQEVIAEMTNG-GVDRS  262 (373)
Q Consensus       188 ~~~~vlI~G~g-~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~--vi~-~~~~~~~~~~~~~~~~~~-~~d~v  262 (373)
                      ..++|||+|++ ..|+..+..++..|. +|+++++++...... +..++.  .+. +......+.+.+.+.... ++|++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~-s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v   80 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRF-SRAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL   80 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHH-HHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence            45899999984 689999999999999 899998876443321 112222  221 222223366666665555 79999


Q ss_pred             EEccCChHhHHHHHHHhhcC
Q 017336          263 VECTGNIDNMISAFECVHDG  282 (373)
Q Consensus       263 id~~g~~~~~~~~~~~l~~~  282 (373)
                      |-+......+....+.+.+.
T Consensus        81 IP~~e~~~~~a~~~~~l~~~  100 (389)
T PRK06849         81 IPTCEEVFYLSHAKEELSAY  100 (389)
T ss_pred             EECChHHHhHHhhhhhhcCC
Confidence            98875432333344455553

>PRK13984 putative oxidoreductase; Provisional

Probab=93.74  E-value=0.37  Score=48.88  Aligned_cols=77  Identities=27%  Similarity=0.302  Sum_probs=53.6

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh---------------------hHHHHHHhcCCceeecCCC-C
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRFEEAKKFGVTDFVNTSE-H  243 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~---------------------~~~~~~~~lg~~~vi~~~~-~  243 (373)
                      .+++++|+|+|+|..|+.++..+++.|. +|+++++.+                     ...+.++++|++..++..- .
T Consensus       280 ~~~~~~v~IIGaG~aGl~aA~~L~~~G~-~v~vie~~~~~gG~~~~~i~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~  358 (604)
T PRK13984        280 EKKNKKVAIVGSGPAGLSAAYFLATMGY-EVTVYESLSKPGGVMRYGIPSYRLPDEALDKDIAFIEALGVKIHLNTRVGK  358 (604)
T ss_pred             ccCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceEeecCCcccCCHHHHHHHHHHHHHCCcEEECCCEeCC
Confidence            4678899999999999999999999998 788886543                     1345667788765544321 1


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCC
Q 017336          244 DRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       244 ~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      +... +.+.    ..+|.+|.++|.
T Consensus       359 ~~~~-~~~~----~~yD~vilAtGa  378 (604)
T PRK13984        359 DIPL-EELR----EKHDAVFLSTGF  378 (604)
T ss_pred             cCCH-HHHH----hcCCEEEEEcCc
Confidence            1111 1221    269999999995

>PRK07411 hypothetical protein; Validated

Probab=93.72  E-value=0.45  Score=45.42  Aligned_cols=34  Identities=32%  Similarity=0.275  Sum_probs=30.8

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      ..+|||+|+|++|..+++.+-+.|.++++.++.+
T Consensus        38 ~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D   71 (390)
T PRK07411         38 AASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFD   71 (390)
T ss_pred             cCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4689999999999999999999999999988764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	373
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		3e-98
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		9e-98
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		3e-80
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		4e-80
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		4e-80
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		4e-80
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		3e-77
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		1e-73
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		1e-73
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		1e-73
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		2e-73
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		4e-73
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		4e-73
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		5e-73
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		5e-73
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		6e-73
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		1e-72
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		2e-72
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		4e-72
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		5e-72
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		5e-72
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		5e-71
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		5e-71
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		4e-70
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		2e-69
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		7e-68
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		3e-63
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		4e-63
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		5e-63
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		6e-63
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		8e-61
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		1e-22
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		3e-11
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		3e-11
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		4e-11
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		5e-09
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		9e-08
4ilk_A	359	Crystal Structure Of Short Chain Alcohol Dehydrogen		2e-07
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		2e-07
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		2e-07
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		3e-07
1pl7_A	356	Human Sorbitol Dehydrogenase (Apo) Length = 356		3e-06
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		9e-06
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		2e-05
1pl6_A	356	Human SdhNADHINHIBITOR COMPLEX Length = 356		4e-05
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		5e-05
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		5e-05
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		5e-05
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		5e-05
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		6e-05
1ykf_A	352	Nadp-Dependent Alcohol Dehydrogenase From Thermoana		6e-05
2nvb_A	352	Contribution Of Pro275 To The Thermostability Of Th		8e-05
3fpl_A	351	Chimera Of Alcohol Dehydrogenase By Exchange Of The		4e-04
1uuf_A	369	Crystal Structure Of A Zinc-Type Alcohol Dehydrogen		5e-04
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		5e-04

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score =  355 bits (910), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 170/364 (46%), Positives = 227/364 (62%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAVA+E  KPL+I+DV+VAPPQA EVRIKI YT+LC TD Y W  K    LFP I GH  
Sbjct: 11  AAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEA 70
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                             HV+P +  EC +C+ C+S  +N+C  +R     G+M+ D +S
Sbjct: 71  AGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKS 130
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RFS+NG+P+ HF+GTSTFS+YTVVH   VAKI+P APLDKVC+L CGV TGLGA  N AK
Sbjct: 131 RFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAK 190
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
            E                               +D  SK++E AKKFGV +FVN  +HD+
Sbjct: 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDK 250
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEVI ++T+GGVD S EC GN+  M +A EC H GWG +V+VGV +      T+P  +
Sbjct: 251 PIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL 310
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           +  R  KGT FG +K RT +P +V+ YMNK+++++++ITH +   EINKAF+ + +G  L
Sbjct: 311 VTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL 370
Query: 366 RCII 369
           RC++
Sbjct: 371 RCVL 374

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score =  353 bits (906), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 167/366 (45%), Positives = 229/366 (62%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAVAWE  KPL+I+DV+VAPPQA EVR+K+ YT+LC TD Y W  K    LFP + GH  
Sbjct: 29  AAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKDPEGLFPCVLGHEA 88
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                             HV+P +  EC +C+ C+S  +N+C  +R     GVM+ D +S
Sbjct: 89  AGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKS 148
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RFSING+P+ HF+GTSTFS+YTVVH   VAKI+P+APL+KVC+L CGV TGLGA  N AK
Sbjct: 149 RFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCGVPTGLGAVWNTAK 208
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
            E                               +D  SK+F+ AK FGVT+F+N  EH++
Sbjct: 209 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVTEFINPKEHEQ 268
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQ+VI ++T+GGVD S EC GN+  M SA EC H GWG +V+VGV +      T+P  +
Sbjct: 269 PIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQL 328
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           +  R  KGT FG +K R+ +PS+VD Y+ K+++++++ITH +  ++INKAF+ M  G+ L
Sbjct: 329 VTGRVWKGTAFGGFKSRSQVPSLVDKYLKKEIKVDEYITHNMTLADINKAFDLMHDGDCL 388
Query: 366 RCIISM 371
           R ++ M
Sbjct: 389 RVVLDM 394

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score =  295 bits (754), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 155/366 (42%), Positives = 217/366 (59%), Gaps = 1/366 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y          FP I GH  
Sbjct: 9   AAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLG 68
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P++  +CG+C+ C +  +N+C  +R+   +G+M  DG S
Sbjct: 69  AGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTS 127
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG GA +N AK
Sbjct: 128 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAK 187
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
            E                               VD +  +F  AK+FG T+ +N  +  +
Sbjct: 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSK 247
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +      T+P  +
Sbjct: 248 PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQL 307
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           +  RT KGT FG +K    +P +V  YM+K++++++F+TH + F EINKAFE M  G+ +
Sbjct: 308 VTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSI 367
Query: 366 RCIISM 371
           R ++ +
Sbjct: 368 RTVVKI 373

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score =  295 bits (754), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 155/366 (42%), Positives = 217/366 (59%), Gaps = 1/366 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y          FP I GH  
Sbjct: 10  AAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEG 69
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P++  +CG+C+ C +  +N+C  +R+   +G+M  DG S
Sbjct: 70  AGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTS 128
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG GA +N AK
Sbjct: 129 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAK 188
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
            E                               VD +  +F  AK+FG T+ +N  +  +
Sbjct: 189 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSK 248
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +      T+P  +
Sbjct: 249 PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQL 308
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           +  RT KGT FG +K    +P +V  YM+K++++++F+TH + F EINKAFE M  G+ +
Sbjct: 309 VTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSI 368
Query: 366 RCIISM 371
           R ++ +
Sbjct: 369 RTVVKI 374

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score =  295 bits (754), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 155/366 (42%), Positives = 217/366 (59%), Gaps = 1/366 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y          FP I GH  
Sbjct: 9   AAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEG 68
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P++  +CG+C+ C +  +N+C  +R+   +G+M  DG S
Sbjct: 69  AGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTS 127
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG GA +N AK
Sbjct: 128 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAK 187
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
            E                               VD +  +F  AK+FG T+ +N  +  +
Sbjct: 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSK 247
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +      T+P  +
Sbjct: 248 PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQL 307
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           +  RT KGT FG +K    +P +V  YM+K++++++F+TH + F EINKAFE M  G+ +
Sbjct: 308 VTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSI 367
Query: 366 RCIISM 371
           R ++ +
Sbjct: 368 RTVVKI 373

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score =  295 bits (754), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 155/366 (42%), Positives = 217/366 (59%), Gaps = 1/366 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y          FP I GH  
Sbjct: 10  AAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEG 69
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P++  +CG+C+ C +  +N+C  +R+   +G+M  DG S
Sbjct: 70  AGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTS 128
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG GA +N AK
Sbjct: 129 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAK 188
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
            E                               VD +  +F  AK+FG T+ +N  +  +
Sbjct: 189 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSK 248
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +      T+P  +
Sbjct: 249 PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQL 308
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           +  RT KGT FG +K    +P +V  YM+K++++++F+TH + F EINKAFE M  G+ +
Sbjct: 309 VTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSI 368
Query: 366 RCIISM 371
           R ++ +
Sbjct: 369 RTVVKI 374

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score =  285 bits (729), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 152/366 (41%), Positives = 210/366 (57%), Gaps = 2/366 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAVAWEA KPL+I+++EV  P A E+RIKI  T +C TDLY          FP + GH  
Sbjct: 11  AAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEG 70
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P+F  +CG+CR C+S  +N C     N    VM +  ++
Sbjct: 71  AGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM-SPKET 129
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G  V  FLGTSTFS+YTVV+   VAKI+P APLD VC+L CGVSTG GA +N AK
Sbjct: 130 RFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAK 189
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
            E                               VD +  +FE+AK FG TDFVN ++H  
Sbjct: 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSE 249
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PI +V+++MTNGGVD S+EC GN+  M +A E    GWGV+VLVG      V  T+PI +
Sbjct: 250 PISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDV-ATRPIQL 308
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           +  RT KG+ FG +K +  +P +V  Y++K+++L++FITHR+P   +N A + M  G+ +
Sbjct: 309 IAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKCI 368
Query: 366 RCIISM 371
           R ++S+
Sbjct: 369 RTVLSL 374

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score =  273 bits (698), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 144/366 (39%), Positives = 205/366 (56%), Gaps = 2/366 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TPL P I GH  
Sbjct: 11  AAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPL-PVIAGHEA 69
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P+FT +CG CR C+    N C    ++  RG M  DG S
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTS 128
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ + VAK
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAK 188
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
             +                              VD +  +F +AK+ G T+ VN  ++ +
Sbjct: 189 VTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKK 248
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP         P+ +
Sbjct: 249 PIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLL 308
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+ +  GE +
Sbjct: 309 LSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESI 368
Query: 366 RCIISM 371
           R I++ 
Sbjct: 369 RTILTF 374

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score =  273 bits (697), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 144/366 (39%), Positives = 205/366 (56%), Gaps = 2/366 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TPL P I GH  
Sbjct: 11  AAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPL-PVIAGHEA 69
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P+FT +CG CR C+    N C    ++  RG M  DG S
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTS 128
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ + VAK
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAK 188
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
             +                              VD +  +F +AK+ G T+ VN  ++ +
Sbjct: 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKK 248
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP         P+ +
Sbjct: 249 PIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLL 308
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+ +  GE +
Sbjct: 309 LSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESI 368
Query: 366 RCIISM 371
           R I++ 
Sbjct: 369 RTILTF 374

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  273 bits (697), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 145/366 (39%), Positives = 204/366 (55%), Gaps = 2/366 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D         TPL P I GH  
Sbjct: 11  AAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVSGTLVTPL-PVIAGHEA 69
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P+FT +CG CR C+    N C    ++  RG M  DG S
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTS 128
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ + VAK
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAK 188
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
             +                              VD +  RF +AK+ G T+ VN  ++ +
Sbjct: 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATECVNPQDYKK 248
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP         P+ +
Sbjct: 249 PIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLL 308
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+ +  GE +
Sbjct: 309 LSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESI 368
Query: 366 RCIISM 371
           R I++ 
Sbjct: 369 RTILTF 374

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  272 bits (696), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 144/366 (39%), Positives = 205/366 (56%), Gaps = 2/366 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TPL P I GH  
Sbjct: 11  AAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPL-PVIAGHEA 69
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P+FT +CG CR C+    N C    ++  RG M  DG S
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTS 128
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ + VAK
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAK 188
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
             +                              VD +  +F +AK+ G T+ VN  ++ +
Sbjct: 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKK 248
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP         P+ +
Sbjct: 249 PIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLL 308
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+ +  GE +
Sbjct: 309 LSGRTWKGCIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESI 368
Query: 366 RCIISM 371
           R I++ 
Sbjct: 369 RTILTF 374

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score =  271 bits (694), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 143/366 (39%), Positives = 204/366 (55%), Gaps = 2/366 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TPL P I GH  
Sbjct: 11  AAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPL-PVIAGHEA 69
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P+FT +CG CR C+    N C    ++  RG M  DG S
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTS 128
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ + VAK
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAK 188
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
             +                              VD +  +F +AK+ G T+ VN  ++ +
Sbjct: 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKK 248
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+ GVP         P+ +
Sbjct: 249 PIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVITGVPPDSQNLSMNPMLL 308
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+ +  GE +
Sbjct: 309 LSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESI 368
Query: 366 RCIISM 371
           R I++ 
Sbjct: 369 RTILTF 374

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score =  271 bits (693), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 143/366 (39%), Positives = 205/366 (56%), Gaps = 2/366 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TPL P I GH  
Sbjct: 11  AAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPL-PVIAGHEA 69
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P++T +CG CR C+    N C    ++  RG M  DG S
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTS 128
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ + VAK
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAK 188
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
             +                              VD +  +F +AK+ G T+ VN  ++ +
Sbjct: 189 VTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKK 248
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP         P+ +
Sbjct: 249 PIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLL 308
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+ +  GE +
Sbjct: 309 LSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESI 368
Query: 366 RCIISM 371
           R I++ 
Sbjct: 369 RTILTF 374

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  271 bits (693), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 141/366 (38%), Positives = 202/366 (55%), Gaps = 2/366 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAV WE  KP  I+DVEVAPP+A EVRIK+    +CRTD +       TPL P I GH  
Sbjct: 11  AAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPL-PVILGHEA 69
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P+FT +CG CR C++  SN C    +   RG  L DG  
Sbjct: 70  AGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGT-LQDGTR 128
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ +NVAK
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAK 188
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
                                            VD +  +F +AK+ G T+ +N  ++ +
Sbjct: 189 VTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKK 248
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEV+ EMT+GGVD S E  G +D M+++  C H+  G +V+VGVP         P+ +
Sbjct: 249 PIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLL 308
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           L  RT KG  +G +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+ +  G+ +
Sbjct: 309 LTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSI 368
Query: 366 RCIISM 371
           R +++ 
Sbjct: 369 RTVLTF 374

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score =  271 bits (692), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 143/366 (39%), Positives = 205/366 (56%), Gaps = 2/366 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TPL P I GH  
Sbjct: 11  AAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPL-PVIAGHEA 69
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P++T +CG CR C+    N C    ++  RG M  DG S
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTS 128
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ + VAK
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAK 188
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
             +                              VD +  +F +AK+ G T+ VN  ++ +
Sbjct: 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKK 248
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP         P+ +
Sbjct: 249 PIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLL 308
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+ +  GE +
Sbjct: 309 LSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESI 368
Query: 366 RCIISM 371
           R I++ 
Sbjct: 369 RTILTF 374

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score =  271 bits (692), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 143/366 (39%), Positives = 204/366 (55%), Gaps = 2/366 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TPL P I GH  
Sbjct: 11  AAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPL-PVIAGHEA 69
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P+FT +CG CR C+    N C    ++  RG M  DG S
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTS 128
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ + VAK
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAK 188
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
             +                              VD +  +F +AK+ G T+ VN  ++ +
Sbjct: 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKK 248
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+ GVP         P+ +
Sbjct: 249 PIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVISGVPPDSQNLSMNPMLL 308
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+ +  GE +
Sbjct: 309 LSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESI 368
Query: 366 RCIISM 371
           R I++ 
Sbjct: 369 RTILTF 374

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score =  270 bits (689), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 143/366 (39%), Positives = 204/366 (55%), Gaps = 2/366 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TPL P I GH  
Sbjct: 11  AAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPL-PVIAGHEA 69
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P+ T +CG CR C+    N C    ++  RG M  DG S
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTS 128
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ + VAK
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAK 188
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
             +                              VD +  +F +AK+ G T+ VN  ++ +
Sbjct: 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKK 248
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP         P+ +
Sbjct: 249 PIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLL 308
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+ +  GE +
Sbjct: 309 LSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESI 368
Query: 366 RCIISM 371
           R I++ 
Sbjct: 369 RTILTF 374

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  269 bits (687), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 140/366 (38%), Positives = 201/366 (54%), Gaps = 2/366 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAV WE  KP  I+DVEVAPP+A EVRIK+    +C TD +       TPL P I GH  
Sbjct: 11  AAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVSGNLVTPL-PVILGHEA 69
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P+FT +CG CR C++  SN C    +   RG  L DG  
Sbjct: 70  AGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGT-LQDGTR 128
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ +NVAK
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAK 188
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
                                            VD +  +F +AK+ G T+ +N  ++ +
Sbjct: 189 VTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKK 248
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEV+ EMT+GGVD S E  G +D M+++  C H+  G +V+VGVP         P+ +
Sbjct: 249 PIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLL 308
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           L  RT KG  +G +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+ +  G+ +
Sbjct: 309 LTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSI 368
Query: 366 RCIISM 371
           R +++ 
Sbjct: 369 RTVLTF 374

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  268 bits (685), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 140/366 (38%), Positives = 201/366 (54%), Gaps = 2/366 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAV WE  KP  I+DVEVAPP+A EVRIK+    +C TD +       TPL P I GH  
Sbjct: 11  AAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICGTDDHVVSGNLVTPL-PVILGHEA 69
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P+FT +CG CR C++  SN C    +   RG  L DG  
Sbjct: 70  AGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGT-LQDGTR 128
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ +NVAK
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAK 188
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
                                            VD +  +F +AK+ G T+ +N  ++ +
Sbjct: 189 VTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKK 248
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEV+ EMT+GGVD S E  G +D M+++  C H+  G +V+VGVP         P+ +
Sbjct: 249 PIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLL 308
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           L  RT KG  +G +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+ +  G+ +
Sbjct: 309 LTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSI 368
Query: 366 RCIISM 371
           R +++ 
Sbjct: 369 RTVLTF 374

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score =  268 bits (684), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 140/366 (38%), Positives = 201/366 (54%), Gaps = 2/366 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAV WE  KP  I+DVEVAPP+A EVRIK+    +CRTD +       TPL P I GH  
Sbjct: 11  AAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPL-PVILGHEA 69
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P+FT +CG CR C++  SN C    +   RG  L DG  
Sbjct: 70  AGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGT-LQDGTR 128
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ +NVAK
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAK 188
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
                                            VD +  +F +AK+ G T+ +N  ++ +
Sbjct: 189 VTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKK 248
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEV+ EMT+GGVD S E  G +D M+++  C H+  G +V+VGVP         P+ +
Sbjct: 249 PIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLL 308
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           L  RT KG  +G +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+ +  G+ +
Sbjct: 309 LTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSI 368
Query: 366 RCIISM 371
             +++ 
Sbjct: 369 CTVLTF 374

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score =  267 bits (683), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 142/366 (38%), Positives = 203/366 (55%), Gaps = 2/366 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TPL P I GH  
Sbjct: 11  AAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPL-PVIAGHEA 69
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P+FT +CG CR C+    N C    ++  RG M  DG S
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTS 128
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ + VAK
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAK 188
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
             +                              VD +  +F +AK+ G T+ VN  ++ +
Sbjct: 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKK 248
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+V V          P+ +
Sbjct: 249 PIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVAVTPDSQNLSMNPMLL 308
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+ +  GE +
Sbjct: 309 LSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESI 368
Query: 366 RCIISM 371
           R I++ 
Sbjct: 369 RTILTF 374

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  264 bits (675), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 140/365 (38%), Positives = 203/365 (55%), Gaps = 3/365 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAV WE  KP  I++VEVAPP+A EVRIK+    +CR+D +        PL P I GH  
Sbjct: 11  AAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVAPL-PVIAGHEA 69
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P+F  +CG C  C+    N+C L  ++  RG M  DG S
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC-LKNLSMPRGTM-QDGTS 127
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ + VAK
Sbjct: 128 RFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAK 187
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
             +                              VD +  +F +AK+ G T+ VN  ++ +
Sbjct: 188 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKK 247
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP         P+ +
Sbjct: 248 PIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMNPMLL 307
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+ +  G+ +
Sbjct: 308 LSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGKSI 367
Query: 366 RCIIS 370
           R I++
Sbjct: 368 RTILT 372

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  264 bits (675), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 140/365 (38%), Positives = 203/365 (55%), Gaps = 3/365 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAV WE  KP  I++VEVAPP+A EVRIK+    +CR+D +        PL P I GH  
Sbjct: 11  AAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVAPL-PVIAGHEA 69
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P+F  +CG C  C+    N+C L  ++  RG M  DG S
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC-LKNLSMPRGTM-QDGTS 127
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ + VAK
Sbjct: 128 RFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAK 187
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
             +                              VD +  +F +AK+ G T+ VN  ++ +
Sbjct: 188 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKK 247
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP         P+ +
Sbjct: 248 PIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMNPMLL 307
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+ +  G+ +
Sbjct: 308 LSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGKSI 367
Query: 366 RCIIS 370
           R I++
Sbjct: 368 RTILT 372

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score =  261 bits (667), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 136/366 (37%), Positives = 201/366 (54%), Gaps = 2/366 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAV WE  KP  I++VEVAPP+A EVRIK+    +CR+D +       TPL P I GH  
Sbjct: 11  AAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVSGNLVTPL-PVILGHEA 69
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P+FT +CG CR C++  SN C    +   RG  L DG  
Sbjct: 70  AGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRGT-LQDGTR 128
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+ +G+P++HF+G STFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ + VAK
Sbjct: 129 RFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAK 188
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
                                            VD +  +F +AK+ G T+ +N  ++ +
Sbjct: 189 VTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKK 248
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEV+ EMT+GGVD S E  G +D M+++  C H+  G +V+VGVP         P+ +
Sbjct: 249 PIQEVLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDSQNLSINPMLL 308
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           L  RT KG  FG +K +  +P +V  +M K+  L+  IT+ +PF +IN+ F+ +  G+ +
Sbjct: 309 LTGRTWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNVLPFEKINEGFDLLRSGKSI 368
Query: 366 RCIISM 371
           R +++ 
Sbjct: 369 RTVLTF 374

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score =  259 bits (661), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 139/367 (37%), Positives = 200/367 (54%), Gaps = 3/367 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AA+AWEAGKPL I++VEVAPP+A EVRI+I  TSLC TD    +SK +   FP I GH  
Sbjct: 13  AAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEGLAFPVIVGHEA 72
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDL---LRINPVRGVMLAD 122
                              V+P++   C  C+ C S ++N+C     L+       ++ D
Sbjct: 73  AGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPASDQQLMED 132
Query: 123 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 182
             SRF+  G+PV HF GTSTFS+YTVV    +AKI+  A L++VC+L CG STG GA +N
Sbjct: 133 KTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGFSTGYGAAIN 192
Query: 183 VAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSE 242
            AK                                 +D +S++F +AK  G TD +N  +
Sbjct: 193 NAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATDCLNPRD 252
Query: 243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP 302
             +PIQEVI E+T GGVD +++C G  + M +A +C   GWG    +GV +        P
Sbjct: 253 LHKPIQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVAAGSKGLTVFP 312
Query: 303 INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG 362
             ++  RT+ GTFFG +K    +P +V  Y NK+  L+  +TH +PF +I++AF+ M +G
Sbjct: 313 EELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTLPFDKISEAFDLMNQG 372
Query: 363 EGLRCII 369
           + +R I+
Sbjct: 373 KSIRTIL 379

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score =  254 bits (648), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 136/364 (37%), Positives = 197/364 (54%), Gaps = 2/364 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAV WE  KP  I++VEVAPP+A EVRIK+    +C TD +       TPL P I GH  
Sbjct: 11  AAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTMVTPL-PVILGHEA 69
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P+   +CG CR C++  SN C    ++  +G  L DG S
Sbjct: 70  AGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQGT-LQDGTS 128
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+   +P++HFLG STFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ +NVAK
Sbjct: 129 RFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAK 188
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
                                            VD +  +F +AK+ G T+ +N  ++ +
Sbjct: 189 VTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKK 248
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEV+ EMT+GGVD S E  G +D M+++  C H+  G +V+VGVP         P+ +
Sbjct: 249 PIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSMNPMLL 308
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           L  RT KG   G +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+ +  G+ +
Sbjct: 309 LTGRTWKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSI 368
Query: 366 RCII 369
           R I+
Sbjct: 369 RTIL 372

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  238 bits (608), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 125/370 (33%), Positives = 200/370 (54%), Gaps = 8/370 (2%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AA+AW+ G PL I+++EV+PP+A EVRI++  T +C TD+   + K +  LFP + GH  
Sbjct: 11  AAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCHTDINATDPK-KKALFPVVLGHEC 69
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLR---INPVRGVMLAD 122
                              V+P F  +C  C+ C S ++N+C  LR      +   ++ D
Sbjct: 70  AGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMED 129
Query: 123 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 182
             SRF+  G  + HF+G S+FS+YTVV    +A+++  A L++VC++ CG S+G GA +N
Sbjct: 130 RTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAIN 189
Query: 183 VAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSE 242
            AK                                 +D + ++F +AK  G TD +N  E
Sbjct: 190 TAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRE 249
Query: 243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP 302
            D+P+Q+VI E+T GGVD S++C G    + +A +C   GWG   +VG    +   MT P
Sbjct: 250 LDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDE---MTIP 306
Query: 303 -INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVK 361
            ++V+  R++ GTFFG +K    +P++V  Y NK+ +L+  +TH +PF  IN A + M +
Sbjct: 307 TVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKE 366
Query: 362 GEGLRCIISM 371
           G+ +R I++ 
Sbjct: 367 GKSIRTILTF 376

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score =  238 bits (607), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 129/366 (35%), Positives = 193/366 (52%), Gaps = 3/366 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAV WE  +P  I+++EVAPP+  EVRIKI  T +CRTD +  +       FP I GH  
Sbjct: 11  AAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGT-MVSKFPVIVGHEA 69
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P+F  +C +C  CR+   N+C    I   RGV LADG +
Sbjct: 70  TGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITG-RGV-LADGTT 127
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+PV+HFL TSTF+EYTVV    VAKI+  AP +KVC++ CG STG GA +   K
Sbjct: 128 RFTCKGKPVHHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGK 187
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
            +                               +D +  +FE+A   G T+ ++  +  +
Sbjct: 188 VKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTK 247
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PI EV++EMT   V  + E  G+++ MI A    H  +G +V+VGVP    +    P+ +
Sbjct: 248 PISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLL 307
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
              RT KG  FG  K R D+P +V  ++ K+ +L++ ITH +PF +I++ FE +  G+ +
Sbjct: 308 FTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGFELLNSGQSI 367
Query: 366 RCIISM 371
           R +++ 
Sbjct: 368 RTVLTF 373

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  238 bits (606), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 125/370 (33%), Positives = 200/370 (54%), Gaps = 8/370 (2%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AA+AW+ G PL I+++EV+PP+A EVRI++  T +C TD+   + K +  LFP + GH  
Sbjct: 11  AAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKALFPVVLGHEC 69
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLR---INPVRGVMLAD 122
                              V+P F  +C  C+ C S ++N+C  LR      +   ++ D
Sbjct: 70  AGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMED 129
Query: 123 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 182
             SRF+  G  + HF+G S+FS+YTVV    +A+++  A L++VC++ CG S+G GA +N
Sbjct: 130 RTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAIN 189
Query: 183 VAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSE 242
            AK                                 +D + ++F +AK  G TD +N  E
Sbjct: 190 TAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRE 249
Query: 243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP 302
            D+P+Q+VI E+T GGVD S++C G    + +A +C   GWG   +VG    +   MT P
Sbjct: 250 LDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDE---MTIP 306
Query: 303 -INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVK 361
            ++V+  R++ GTFFG +K    +P++V  Y NK+ +L+  +TH +PF  IN A + M +
Sbjct: 307 TVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKE 366
Query: 362 GEGLRCIISM 371
           G+ +R I++ 
Sbjct: 367 GKSIRTILTF 376

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score =  238 bits (606), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 128/366 (34%), Positives = 193/366 (52%), Gaps = 3/366 (0%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAV WE  +P  I+++EVAPP+  EVRIKI  T +CRTD +  +       FP I GH  
Sbjct: 11  AAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGT-MVSKFPVIVGHEA 69
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P+F  +C +C  CR+   N+C    I   RGV LADG +
Sbjct: 70  TGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITG-RGV-LADGTT 127
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+PV+HF+ TSTF+EYTVV    VAKI+  AP +KVC++ CG STG GA +   K
Sbjct: 128 RFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGK 187
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
            +                               +D +  +FE+A   G T+ ++  +  +
Sbjct: 188 VKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTK 247
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PI EV++EMT   V  + E  G+++ MI A    H  +G +V+VGVP    +    P+ +
Sbjct: 248 PISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLL 307
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
              RT KG  FG  K R D+P +V  ++ K+ +L++ ITH +PF +I++ FE +  G+ +
Sbjct: 308 FTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGFELLNSGQSI 367
Query: 366 RCIISM 371
           R +++ 
Sbjct: 368 RTVLTF 373

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score =  230 bits (587), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 132/364 (36%), Positives = 198/364 (54%), Gaps = 4/364 (1%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAVAWE  KPL ++ + VAPP+A EVRIKI  + +C +D    +    +  FP I GH  
Sbjct: 12  AAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSK-FPVILGHEA 70
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                              V+P+F  +CG CR C+S  SN C+   +    G+M AD  S
Sbjct: 71  VGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLM-ADMTS 129
Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+P+ + +GTSTF+EYTVV    VAKI+P APL+  C++ CG +TG GA +N AK
Sbjct: 130 RFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLES-CLIGCGFATGYGAAVNTAK 188
Query: 186 PERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
                                            V     +F +A + G T+ +N  ++D+
Sbjct: 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDK 248
Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PI EVI E TNGGVD +VEC G I+ M++A +  + G GV V++G+ S +      P+ +
Sbjct: 249 PIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLL 308
Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           L  R+LKG+ FG +K   ++  +VD YM K++ +   ++ ++   +INKAFE +  G+G+
Sbjct: 309 LTGRSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQGV 367
Query: 366 RCII 369
           R I+
Sbjct: 368 RSIM 371

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 150/372 (40%), Gaps = 16/372 (4%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           AAV    G    +Q +++  PQ  EV +K+  T +C TDL   + K   PL P + GH  
Sbjct: 9   AAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPL-PAVLGHEG 67
Query: 66  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
                             HV+  + G CG C  C +     C         G   AD + 
Sbjct: 68  SGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSG---ADSEG 123
Query: 126 RFSI----NGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 181
             ++     G   +HF   S+F+ Y +       K+    P++ +  L CG+ TG GA +
Sbjct: 124 NHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACI 183
Query: 182 NVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTS 241
           N  K                                 VD    R E AK+ G T  +N+ 
Sbjct: 184 NALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSK 243
Query: 242 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP--SKDAVFM 299
             D P+   I E+T+GGV+ ++E TG+ + +    + +     +AV VG P     A F 
Sbjct: 244 TQD-PV-AAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAV-VGAPQLGTTAQFD 300
Query: 300 TKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 359
              + +L  +T+ G   G+  P+  +P +V +Y   +   ++ +     F EIN+A    
Sbjct: 301 VNDL-LLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKFY-AFDEINQAAIDS 358
Query: 360 VKGEGLRCIISM 371
            KG  L+ II +
Sbjct: 359 RKGITLKPIIKI 370

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 148/371 (39%), Gaps = 46/371 (12%)
Query: 1   MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFW---ESKGQTPLF 57
           M  + AA+  +  +PL I+DV +  PQ  EV I+I    +CRTDL  W   E+K Q    
Sbjct: 1   MVKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAK-QGFRL 59
Query: 58  PRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 117
           P I GH                     V+    G+   CR+CR    N+C     N +  
Sbjct: 60  PIILGHENAGTIVEVGELAKVKKGDNVVVYATWGDL-TCRYCREGKFNICK----NQI-- 112
Query: 118 VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVSTG 176
                      I G+  N       FSEY +V S   + K+N L+P++   +   G +T 
Sbjct: 113 -----------IPGQTTN-----GGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAG-TTS 155
Query: 177 LGATLN----VAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKF 232
           +GA       ++K                                 + RS K  + A + 
Sbjct: 156 MGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL 215
Query: 233 GVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV 291
           G  D+V+     +  + +I ++T+G G   +++  G  +   +  + +    G  +LVG+
Sbjct: 216 G-ADYVS---EMKDAESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGM 270
Query: 292 PSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSE 351
             K          V N++ L      NY    DL  VV   +++  +++ +I  ++P  +
Sbjct: 271 EGKRVSLEAFDTAVWNKKLLG----SNYGSLNDLEDVV--RLSESGKIKPYII-KVPLDD 323
Query: 352 INKAFEYMVKG 362
           INKAF  + +G
Sbjct: 324 INKAFTNLDEG 334

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 146/380 (38%), Gaps = 56/380 (14%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYF----WESKGQTPLFPRIF 61
           AAV  +  +PL I++VE       EV ++IK   +C TDL+     W  K + PL P   
Sbjct: 3   AAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIP--- 59
Query: 62  GHXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 120
           GH                     V +P     CG C +C S    +C+  +         
Sbjct: 60  GHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQK--------- 110
Query: 121 ADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI-NPLAPLDKVCILSCGVSTGLGA 179
               + +S++G           ++EY    +  V KI + L+  +   I   GV+T    
Sbjct: 111 ---NAGYSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKAL 157
Query: 180 TLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVN 239
            +  AKP                                VD   ++ E AK+ G    VN
Sbjct: 158 KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVA---VDIGDEKLELAKELGADLVVN 214
Query: 240 TSEHDRPIQEVIAEMTN---GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 296
                 P++E  A+      GGV  +V    +     SA+  +  G G  VLVG+P ++ 
Sbjct: 215 ------PLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEE- 266
Query: 297 VFMTKPI--NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINK 354
             M  PI   VLN   + G+  G    R DL   +      ++   K I    P  +IN+
Sbjct: 267 --MPIPIFDTVLNGIKIIGSIVGT---RKDLQEALQFAAEGKV---KTIIEVQPLEKINE 318
Query: 355 AFEYMVKGE-GLRCIISMED 373
            F+ M+KG+   R ++++ED
Sbjct: 319 VFDRMLKGQINGRVVLTLED 338

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 146/380 (38%), Gaps = 56/380 (14%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYF----WESKGQTPLFPRIF 61
           AAV  +  +PL I++VE       EV ++IK   +C TDL+     W  K + PL P   
Sbjct: 3   AAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIP--- 59
Query: 62  GHXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 120
           GH                     V +P     CG C +C S    +C+  +         
Sbjct: 60  GHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQK--------- 110
Query: 121 ADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI-NPLAPLDKVCILSCGVSTGLGA 179
               + +S++G           ++EY    +  V KI + L+  +   I   GV+T    
Sbjct: 111 ---NAGYSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKAL 157
Query: 180 TLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVN 239
            +  AKP                                VD   ++ E AK+ G    VN
Sbjct: 158 KVTGAKPGEWVAIYGIGGFGHVAVQYAKAMGLNVVA---VDIGDEKLELAKELGADLVVN 214
Query: 240 TSEHDRPIQEVIAEMTN---GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 296
                 P++E  A+      GGV  +V    +     SA+  +  G G  VLVG+P ++ 
Sbjct: 215 ------PLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEE- 266
Query: 297 VFMTKPI--NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINK 354
             M  PI   VLN   + G+  G    R DL   +      ++   K I    P  +IN+
Sbjct: 267 --MPIPIFDTVLNGIKIIGSIVGT---RKDLQEALQFAAEGKV---KTIIEVQPLEKINE 318
Query: 355 AFEYMVKGE-GLRCIISMED 373
            F+ M+KG+   R ++++ED
Sbjct: 319 VFDRMLKGQINGRVVLTLED 338

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 86/369 (23%), Positives = 130/369 (35%), Gaps = 55/369 (14%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYF----WESKGQTPLFPRIF 61
           AAV    GKPL I +V +  P   ++++ I+ + +C TDL+     W  K   P  P   
Sbjct: 28  AAVVRAFGKPLTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAEGDWPVKPNPPFIP--- 84
Query: 62  GHXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 120
           GH                     V +P     CG CRHC      +C+  ++N       
Sbjct: 85  GHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCE-EQLN------- 136
Query: 121 ADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI------NPLAPLDKVCILSCGVS 174
               + +S+NG           F+EY V     V  +      N +AP     +L  GV+
Sbjct: 137 ----TGYSVNG----------GFAEYVVADPNFVGHLPKNIDFNEIAP-----VLCAGVT 177
Query: 175 TGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGV 234
              G  +   KP                                VD   ++ + A++ G 
Sbjct: 178 VYKGLKVTDTKP---GDWVVISGIGGLGHMAVQYARAMGLNVAAVDIDDRKLDLARRLGA 234
Query: 235 TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 294
           T  VN      P   +  E T+GG    +    +      A   V  G G   L G+P  
Sbjct: 235 TVTVNAKTVADPAAYIRKE-TDGGAQGVLVTAVSPKAFEQALGMVARG-GTVSLNGLPPG 292
Query: 295 DAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 353
           D  F     N VLN  T++G+  G    R DL   +D   + ++   K         +IN
Sbjct: 293 D--FPLSIFNMVLNGVTVRGSIVGT---RLDLQESLDFAADGKV---KATIQTGKLEDIN 344
Query: 354 KAFEYMVKG 362
             F+ M +G
Sbjct: 345 AIFDDMRQG 353

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 220 DRSSKRFEEAKKFGVTDFVNTSEHDRP--IQEVIAEMTNGGVDRSVECTGNIDNMISAFE 277
           D S+ R  +AK+ G  DF+    ++ P  I + +  +     + ++ECTG   ++ +   
Sbjct: 202 DLSASRLSKAKEVG-ADFILEISNESPEEIAKKVEGLLGSKPEVTIECTGVETSIQAGIY 260
Query: 278 CVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL 337
             H G G  VLVG+ S+    MT  + +++  T +    G ++     P  + M  +K +
Sbjct: 261 ATHSG-GTLVLVGLGSE----MTS-VPLVHAATREVDIKGVFRYCNTWPMAISMLASKSV 314
Query: 338 ELEKFITHRIPFSEINKAFEYMVKGEGLRCII 369
            ++  +THR P  +  +AFE   KG GL+ +I
Sbjct: 315 NVKPLVTHRFPLEKALEAFETSKKGLGLKVMI 346

>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 118/347 (34%), Gaps = 44/347 (12%)
Query: 16  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXXXXXXXXXXXX 75
           L I + E+  P A EVR+K+K   +C +D + +        +PR+ GH            
Sbjct: 32  LSIIEREIPTPSAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEG 91
Query: 76  XXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVN 135
                    V       CG C  C     N+C  L +  V     ADG            
Sbjct: 92  VESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLGVH----ADG------------ 135
Query: 136 HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXX 195
                  FSEY VV +    KI P A  D+  ++    +     T +    E        
Sbjct: 136 ------GFSEYAVVPAKNAWKI-PEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYG 188
Query: 196 XXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT 255
                                   DR  +R E+AK+ G    +N S+   P+ E  AE  
Sbjct: 189 AGPIGLTIVQVLKGVYNVKNVIVADRIDERLEKAKESGADWAINNSQ--TPLGESFAE-- 244
Query: 256 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM---TKPINVLNERTLK 312
                + ++ T  ID       C       AV +  P+   V M   ++P  V+ ++ + 
Sbjct: 245 -----KGIKPTLIIDAA-----CHPSILKEAVTLASPAARIVLMGFSSEPSEVI-QQGIT 293
Query: 313 GTFFGNYKPRTD---LPSVVDMYMNKQLELEKFITHRIPFSEINKAF 356
           G     +  R +    P V+D      ++ EK ITH   F  +  A 
Sbjct: 294 GKELSIFSSRLNANKFPVVIDWLSKGLIKPEKLITHTFDFQHVADAI 340

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/357 (20%), Positives = 132/357 (36%), Gaps = 42/357 (11%)
Query: 11  EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPL-------FPRIFG 62
           E GKPL ++D+ +  P+  +V IKI+   +C +D++  + + G   +        P   G
Sbjct: 8   EIGKPLKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLG 67
Query: 63  HXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 121
           H                     V +  + GE G+C +CR    ++CD  R          
Sbjct: 68  HEIAGRIEEVGDEVVGYSKGDLVAVNPWEGE-GNCYYCRIGEEHLCDSPR---------- 116
Query: 122 DGQSRFSINGEPVNHFLGTSTFSEYTVV-HSGCVAKINPLAPLDKVCILSCGVSTGLGAT 180
                  IN +          ++EY +V H   + K+  L+ ++   +   GV+T     
Sbjct: 117 ----WLGINYD--------GAYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVR 164
Query: 181 LNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNT 240
                P +                              VD   +  E AK+ G    +N 
Sbjct: 165 KASLDPSK-TLVVIGAGGGLGTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVINA 223
Query: 241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 300
           S  D P+ E+       G D  ++   N +  +S +  V    G  V+VG+   D  +  
Sbjct: 224 SSQD-PVSEIRRITQGKGADAVIDLN-NSEKTLSIYPYVLAKQGKYVMVGLFGADLKYHA 281
Query: 301 KPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 357
            P+  LNE    G+  GN   ++D   +  M + +  +++  +T  +   E N+A +
Sbjct: 282 -PLITLNEVQFIGSLVGN---QSDFLGI--MSLAEAGKVKPMVTKTMKLEEANEAID 332

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 222 SSKRFEEAKKFGVTDFVN---TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFE 277
           S  R + A++ G    +N   TS  +R  ++ I ++T+G G D  +E TG+   ++   E
Sbjct: 229 SPNRLKLAEEIGADLTLNRRETSVEER--RKAIMDITHGRGADFILEATGDSRALLEGSE 286
Query: 278 CVHDGWGVAVL-VGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQ 336
            +  G   +V  V VP     F      VL   T KG +  +        S+     N Q
Sbjct: 287 LLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSR--NYQ 344
Query: 337 LELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME 372
           L L K ITHR+P  E NKA E M   E L+ I+  E
Sbjct: 345 L-LSKLITHRLPLKEANKALELMESREALKVILYPE 379

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 80/362 (22%), Positives = 127/362 (35%), Gaps = 41/362 (11%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHX 64
           AAV    G PL I++V+V  P   +V +KI+ + +C TDL+  E      P  P I GH 
Sbjct: 9   AAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHE 68
Query: 65  XXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 123
                               V +P     CG C HC +    +C+            +  
Sbjct: 69  GVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCE------------SQQ 116
Query: 124 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVC-ILSCGVSTGLGATLN 182
            + +S+NG           ++EY +     V  +       ++  IL  GV+   G    
Sbjct: 117 NTGYSVNG----------GYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKGLKQT 166
Query: 183 VAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSE 242
            A+P +                              +D    + E A+K G +  VN  +
Sbjct: 167 NARPGQ---WVAISGIGGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQ 223
Query: 243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP 302
            D P++ +  ++  GG    +    +      A      G G   LVG+P  D  F T  
Sbjct: 224 ED-PVEAIQRDI--GGAHGVLVTAVSNSAFGQAIGMARRG-GTIALVGLPPGD--FPTPI 277
Query: 303 IN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVK 361
            + VL    + G+  G    R DL   +D        L K   H     +IN+  + M  
Sbjct: 278 FDVVLKGLHIAGSIVGT---RADLQEALDFAGEG---LVKATIHPGKLDDINQILDQMRA 331
Query: 362 GE 363
           G+
Sbjct: 332 GQ 333

>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 17/156 (10%)
Query: 220 DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGV----DRSVECTGNIDNMISA 275
           D S+ R  +AK+ G  D V     + P QE IA    G +    + ++ECTG   ++ + 
Sbjct: 203 DLSATRLSKAKEIG-ADLVLQISKESP-QE-IARKVEGQLGCKPEVTIECTGAEASIQAG 259
Query: 276 FECVHDGWGVAVLVGVPSKDAVFMTKPI--NVLNERTLKGTFFGNYKPRTDLPSVVDMYM 333
                 G G  VLVG+ S+     T P+    + E  +KG F    +     P  + M  
Sbjct: 260 IYATRSG-GTLVLVGLGSE---MTTVPLLHAAIREVDIKGVF----RYCNTWPVAISMLA 311
Query: 334 NKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 369
           +K + ++  +THR P  +  +AFE   KG GL+ ++
Sbjct: 312 SKSVNVKPLVTHRFPLEKALEAFETFKKGLGLKIML 347

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 74/359 (20%), Positives = 134/359 (37%), Gaps = 42/359 (11%)
Query: 11  EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPL-------FPRIFG 62
           E GKPL +Q++ V  P+  +V IK++   +C +D++  + + G   +        P   G
Sbjct: 8   EIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLG 67
Query: 63  HXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 121
           H                     V +  + GE G+C +CR    ++CD  R          
Sbjct: 68  HEIAGKIEEVGDEVVGYSKGDLVAVNPWQGE-GNCYYCRIGEEHLCDSPR---------- 116
Query: 122 DGQSRFSINGEPVNHFLGTSTFSEYTVV-HSGCVAKINPLAPLDKVCILSCGVSTGLGAT 180
                  IN      F G   ++EY +V H   + K+  L  ++   +   G++T     
Sbjct: 117 ----WLGIN------FDG--AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVR 164
Query: 181 LNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNT 240
                P +                              VD   +  E AK+ G    +N 
Sbjct: 165 KASLDPTK-TLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINA 223
Query: 241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 300
           S  D P+ E+     + GVD  ++   N +  +S +       G  V+VG+   D  +  
Sbjct: 224 SMQD-PLAEIRRITESKGVDAVIDLN-NSEKTLSVYPKALAKQGKYVMVGLFGADLHYHA 281
Query: 301 KPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 359
            P+  L+E    G+  GN   ++D   +  M + +  +++  IT  +   E N+A + +
Sbjct: 282 -PLITLSEIQFVGSLVGN---QSDFLGI--MRLAEAGKVKPMITKTMKLEEANEAIDNL 334

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYF----WESKGQTPLFPRIF 61
           AAV    G PL I +V V  P   +V++KI+ + +C TDL+     W  K   P  P I 
Sbjct: 5   AAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVK---PTLPFIP 61
Query: 62  GHXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRSDVSNMCD 108
           GH                     V +P     CG C HC      +C+
Sbjct: 62  GHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCE 109

>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 17/153 (11%)
Query: 220 DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGV----DRSVECTGNIDNMISA 275
           D S+ R  +AK+ G  D V     + P QE IA    G +    + ++ECTG   ++ + 
Sbjct: 203 DLSATRLSKAKEIG-ADLVLQISKESP-QE-IARKVEGQLGCKPEVTIECTGAEASIQAG 259
Query: 276 FECVHDGWGVAVLVGVPSKDAVFMTKPI--NVLNERTLKGTFFGNYKPRTDLPSVVDMYM 333
                 G G  VLVG+ S+     T P+    + E  +KG F    +     P  +    
Sbjct: 260 IYATRSG-GTLVLVGLGSEX---TTVPLLHAAIREVDIKGVF----RYCNTWPVAISXLA 311
Query: 334 NKQLELEKFITHRIPFSEINKAFEYMVKGEGLR 366
           +K + ++  +THR P  +  +AFE   KG GL+
Sbjct: 312 SKSVNVKPLVTHRFPLEKALEAFETFKKGLGLK 344

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 73/357 (20%), Positives = 133/357 (37%), Gaps = 42/357 (11%)
Query: 11  EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPL-------FPRIFG 62
           E GKPL +Q++ V  P+  +V IK++   +C +D++  + + G   +        P   G
Sbjct: 8   EIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLG 67
Query: 63  HXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 121
           H                     V +  + GE G+C +CR    ++CD  R          
Sbjct: 68  HEIAGKIEEVGDEVVGYSKGDLVAVNPWQGE-GNCYYCRIGEEHLCDSPR---------- 116
Query: 122 DGQSRFSINGEPVNHFLGTSTFSEYTVV-HSGCVAKINPLAPLDKVCILSCGVSTGLGAT 180
                  IN      F G   ++EY +V H   + K+  L  ++   +   G++T     
Sbjct: 117 ----WLGIN------FDG--AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVR 164
Query: 181 LNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNT 240
                P +                              VD   +  E AK+ G    +N 
Sbjct: 165 KASLDPTK-TLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINA 223
Query: 241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 300
           S  D P+ E+     + GVD  ++   + +  +S +       G  V+VG+   D  +  
Sbjct: 224 SMQD-PLAEIRRITESKGVDAVIDLNYS-EKTLSVYPKALAKQGKYVMVGLFGADLHYHA 281
Query: 301 KPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 357
            P+  L+E    G+  GN   ++D   +  M + +  +++  IT  +   E N+A +
Sbjct: 282 -PLITLSEIQFVGSLVGN---QSDFLGI--MRLAEAGKVKPMITKTMKLEEANEAID 332

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 80/365 (21%), Positives = 132/365 (36%), Gaps = 49/365 (13%)
Query: 20  DVEVAPPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPLF-PRIFGHXXXXXXXXXXXXX 76
           +V+V  P   EV IK+  TS+C TDL  Y W    Q+ +  P+I GH             
Sbjct: 20  EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGV 79
Query: 77  XXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNH 136
                  +V       CG C  CR    ++C   +I              F ++ + V  
Sbjct: 80  EGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKI--------------FGVDTDGV-- 123
Query: 137 FLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXX 196
                 F+EY VV +  + K NP +   +   L   +   +   L  A P          
Sbjct: 124 ------FAEYAVVPAQNIWK-NPKSIPPEYATLQEPLGNAVDTVL--AGPISGKSVLITG 174
Query: 197 XXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN 256
                                  + S  R E AKK G    +N  E D  + + + ++T+
Sbjct: 175 AGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEED--VVKEVXDITD 232
Query: 257 G-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA-------VFMTKPINVLNE 308
           G GVD  +E +G    +    + V     V++L   P K         +F    I  +  
Sbjct: 233 GNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITG 292
Query: 309 RTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP-FSEINKAFEYMVKGEGLRC 367
           R L  T++          +V  +  + +L L+  ITH+   F +  +AFE    G+  + 
Sbjct: 293 RHLWETWY----------TVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELXRAGKTGKV 342
Query: 368 IISME 372
           +  ++
Sbjct: 343 VFXLK 347

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 80/365 (21%), Positives = 132/365 (36%), Gaps = 49/365 (13%)
Query: 20  DVEVAPPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPLF-PRIFGHXXXXXXXXXXXXX 76
           +V+V  P   EV IK+  TS+C TDL  Y W    Q+ +  P+I GH             
Sbjct: 21  EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGV 80
Query: 77  XXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNH 136
                  +V       CG C  CR    ++C   +I              F ++ + V  
Sbjct: 81  EGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKI--------------FGVDTDGV-- 124
Query: 137 FLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXX 196
                 F+EY VV +  + K NP +   +   L   +   +   L  A P          
Sbjct: 125 ------FAEYAVVPAQNIWK-NPKSIPPEYATLQEPLGNAVDTVL--AGPISGKSVLITG 175
Query: 197 XXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN 256
                                  + S  R E AKK G    +N  E D  + + + ++T+
Sbjct: 176 AGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEED--VVKEVXDITD 233
Query: 257 G-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA-------VFMTKPINVLNE 308
           G GVD  +E +G    +    + V     V++L   P K         +F    I  +  
Sbjct: 234 GNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITG 293
Query: 309 RTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP-FSEINKAFEYMVKGEGLRC 367
           R L  T++          +V  +  + +L L+  ITH+   F +  +AFE    G+  + 
Sbjct: 294 RHLWETWY----------TVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELXRAGKTGKV 343
Query: 368 IISME 372
           +  ++
Sbjct: 344 VFXLK 348

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 73/359 (20%), Positives = 136/359 (37%), Gaps = 46/359 (12%)
Query: 11  EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXXXXXXX 70
           E GKPL +Q++ V  P+  +V IK++   +C +D++  + +         FG+       
Sbjct: 8   EIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGR---------FGNLRIVEDL 58
Query: 71  XXXXXXXXXXXXXHVLPVFTGE--CGDCRHCRSDVSNMC--DLLRINPVRGVMLADGQSR 126
                          LPV  G    G       +V      DL+ +NP++G    +G   
Sbjct: 59  GVK------------LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPLQG----EGNCY 102
Query: 127 FSINGEP----VNHFLGTS---TFSEYTVV-HSGCVAKINPLAPLDKVCILSCGVSTGLG 178
           +   GE        +LG +    ++EY +V H   + K+  L  ++   +   G++T   
Sbjct: 103 YCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRA 162
Query: 179 ATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFV 238
                  P +                              VD   +  E AK+ G    +
Sbjct: 163 VRKASLDPTK-TLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVI 221
Query: 239 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 298
           N S  D P+ E+     + GVD  ++   + +  +S +       G  V+VG+   D  +
Sbjct: 222 NASMQD-PLAEIRRITESKGVDAVIDLNYS-EKTLSVYPKALAKQGKYVMVGLFGADLHY 279
Query: 299 MTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 357
              P+  L+E    G+  GN   ++D   +  M + +  +++  IT  +   E N+A +
Sbjct: 280 HA-PLITLSEIQFVGSLVGN---QSDFLGI--MRLAEAGKVKPMITKTMKLEEANEAID 332

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 220 DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECV 279
           D +  R   A+ +     VN  E D  + EV+  +T  GV+  +E +GN   +      +
Sbjct: 196 DPNPYRLAFARPY-ADRLVNPLEED--LLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMAL 252
Query: 280 HDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKG-TFFGNYKPR---TDLPSVVDMYMNK 335
             G G A ++G+PS    F     ++  E  ++G T FG    R   T +     +Y + 
Sbjct: 253 IPG-GEARILGIPSDPIRF-----DLAGELVMRGITAFGIAGRRLWQTWMQGTALVY-SG 305
Query: 336 QLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 369
           +++L   +THR+P S   +AF  +  G+ ++ I+
Sbjct: 306 RVDLSPLLTHRLPLSRYREAFGLLASGQAVKVIL 339

>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 227 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV 285
           + AK +G TD VN    D PI+  I  +T G GVD ++   GN D M +A + V  G G 
Sbjct: 205 DAAKYYGATDIVNYK--DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG-GT 261
Query: 286 AVLVGVPSKDAVFMTKPINV---LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 342
              V    +  V     +     +  +T+KG      + R +   ++D+   K+++  K 
Sbjct: 262 IANVNYFGEGEVLPVPRLEWGCGMAHKTIKGGLCPGGRLRME--RLIDLVFYKRVDPSKL 319
Query: 343 ITHRI-PFSEINKAFEYM 359
           +TH    F  I KAF  M
Sbjct: 320 VTHVFRGFDNIEKAFMLM 337

>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 227 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV 285
           + AK +G TD VN    D PI+  I  +T G GVD ++   GN D M +A + V  G G 
Sbjct: 205 DAAKYYGATDIVNYK--DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG-GT 261
Query: 286 AVLVGVPSKDAVFMTKPINV---LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 342
              V    +  V     +     +  +T+KG      + R +   ++D+   K+++  K 
Sbjct: 262 IANVNYFGEGEVLDVPRLEWGCGMAHKTIKGGLCPGGRLRME--RLIDLVFYKRVDPSKL 319
Query: 343 ITHRI-PFSEINKAFEYM 359
           +TH    F  I KAF  M
Sbjct: 320 VTHVFRGFDNIEKAFMLM 337

>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 227 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV 285
           + AK +G TD VN    D PI+  I  +T G GVD ++   GN D M +A + V  G G 
Sbjct: 205 DAAKYYGATDIVNYK--DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG-GT 261
Query: 286 AVLVGVPSKDAVFMTKPINV---LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 342
              V    +  V     +     +  +T+KG      + R ++  + DM +  +++L K 
Sbjct: 262 IANVNYFGEGEVLPVPRLEWGCGMAHKTIKGGLCPGGRLRAEM--LRDMVVYNRVDLSKL 319
Query: 343 ITHRI-PFSEINKAFEYM 359
           +TH    F  I +A   M
Sbjct: 320 VTHVYHGFDHIEEALLLM 337

>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol Dehydrogenase-Like Protein Yahk Length = 369

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 66/173 (38%), Gaps = 17/173 (9%)
Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 65
           A  A+ A +PL   D+    P   +V+I+I Y  +C +DL+   S+    ++P + GH  
Sbjct: 25  AVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEI 84
Query: 66  XXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQ 124
                              V +      C  C  C   + N CD +            G 
Sbjct: 85  VGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMT-----------GT 133
Query: 125 SRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI-NPLAPLDKVCILSC-GVST 175
                  EP  H LG   +S+  VVH   V +I +P   L  V  L C G++T
Sbjct: 134 YNSPTPDEP-GHTLG--GYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITT 183

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 10 WEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGH 63
          +E+   L  +D+ V  P+A E+ I +KY+ +C TDL+ W      P+  P + GH
Sbjct: 12 YESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGH 66

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	373
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	0.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	0.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	0.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	0.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	0.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	0.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	1e-157
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	1e-85
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	2e-75
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	2e-75
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	2e-74
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	1e-73
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	5e-73
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	1e-68
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	1e-68
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	3e-67
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	4e-66
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	2e-64
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	1e-63
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	2e-60
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	1e-59
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	3e-57
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	2e-53
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	1e-52
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	5e-52
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	2e-48
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	5e-47
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	1e-32
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	6e-32
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	3e-31
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	3e-31
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	2e-30
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	6e-30
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	2e-29
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	2e-29
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	2e-29
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	3e-25
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	4e-24
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	2e-22
3gms_A	340	Putative NADPH:quinone reductase; structural genom	4e-22
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	2e-17
4eye_A	342	Probable oxidoreductase; structural genomics, niai	1e-16
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	3e-15
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	1e-14
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	2e-14
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	1e-13
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	5e-13
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	7e-13
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	9e-13
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	1e-12
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	2e-12
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	6e-12
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	7e-12
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	1e-11
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	4e-10
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	8e-10
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	9e-10
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	2e-09
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	2e-08
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	7e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  627 bits (1620), Expect = 0.0
 Identities = 189/366 (51%), Positives = 256/366 (69%), Gaps = 1/366 (0%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y          FP I GH  
Sbjct: 9   AAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLG 68

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
           AG+VESVGEGV+ L+ GD V+P++  +CG+C+ C +  +N+C  +R+   +G+M  DG S
Sbjct: 69  AGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMP-DGTS 127

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG GA +N AK
Sbjct: 128 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAK 187

Query: 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
            E GS  AVFGLG VGLA   G ++AGASRIIGVD +  +F  AK+FG T+ +N  +  +
Sbjct: 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSK 247

Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +      T+P  +
Sbjct: 248 PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQL 307

Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           +  RT KGT FG +K    +P +V  YM+K++++++F+TH + F EINKAFE M  G+ +
Sbjct: 308 VTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSI 367

Query: 366 RCIISM 371
           R ++ +
Sbjct: 368 RTVVKI 373

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  617 bits (1594), Expect = 0.0
 Identities = 175/366 (47%), Positives = 243/366 (66%), Gaps = 2/366 (0%)

Query: 4   TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 63
             AAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TP  P I GH
Sbjct: 9   CKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP-LPVIAGH 67

Query: 64  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 123
           EAAG+VES+GEGV+ +  GD V+P+FT +CG CR C+    N C    ++  RG M  DG
Sbjct: 68  EAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ-DG 126

Query: 124 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 183
            SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ + V
Sbjct: 127 TSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKV 186

Query: 184 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 243
           AK  +GS+ AVFGLG VGL+   G + AGA+RIIGVD +  +F +AK+ G T+ VN  ++
Sbjct: 187 AKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY 246

Query: 244 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI 303
            +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP         P+
Sbjct: 247 KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPM 306

Query: 304 NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 363
            +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+ +  GE
Sbjct: 307 LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGE 366

Query: 364 GLRCII 369
            +R I+
Sbjct: 367 SIRTIL 372

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  615 bits (1588), Expect = 0.0
 Identities = 155/367 (42%), Positives = 236/367 (64%), Gaps = 6/367 (1%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AA+AW+ G PL I+++EV+PP+A EVRI++  T +C TD+   + K +  LFP + GHE 
Sbjct: 11  AAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKALFPVVLGHEC 69

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR---INPVRGVMLAD 122
           AG+VESVG GV++ + GD V+P F  +C  C+ C S ++N+C  LR      +   ++ D
Sbjct: 70  AGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMED 129

Query: 123 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 182
             SRF+  G  + HF+G S+FS+YTVV    +A+++  A L++VC++ CG S+G GA +N
Sbjct: 130 RTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAIN 189

Query: 183 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 242
            AK   GS+ AVFGLG VGL+A  G +IAGASRII +D + ++F +AK  G TD +N  E
Sbjct: 190 TAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRE 249

Query: 243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP 302
            D+P+Q+VI E+T GGVD S++C G    + +A +C   GWG   +VG    +       
Sbjct: 250 LDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDE--MTIPT 307

Query: 303 INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG 362
           ++V+  R++ GTFFG +K    +P++V  Y NK+ +L+  +TH +PF  IN A + M +G
Sbjct: 308 VDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEG 367

Query: 363 EGLRCII 369
           + +R I+
Sbjct: 368 KSIRTIL 374

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  610 bits (1576), Expect = 0.0
 Identities = 184/368 (50%), Positives = 247/368 (67%), Gaps = 2/368 (0%)

Query: 4   TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 63
             AAVAWEA KPL+I+++EV  P A E+RIKI  T +C TDLY          FP + GH
Sbjct: 9   CKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGH 68

Query: 64  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 123
           E AG+VESVG GV++ + G+ V+P+F  +CG+CR C+S  +N C     N    VM    
Sbjct: 69  EGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMS-PK 127

Query: 124 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 183
           ++RF+  G  V  FLGTSTFS+YTVV+   VAKI+P APLD VC+L CGVSTG GA +N 
Sbjct: 128 ETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNT 187

Query: 184 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 243
           AK E GS+ AVFGLGAVGLAA  G   AGA RII VD +  +FE+AK FG TDFVN ++H
Sbjct: 188 AKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDH 247

Query: 244 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI 303
             PI +V+++MTNGGVD S+EC GN+  M +A E    GWGV+VLVG      V  T+PI
Sbjct: 248 SEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDV-ATRPI 306

Query: 304 NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 363
            ++  RT KG+ FG +K +  +P +V  Y++K+++L++FITHR+P   +N A + M  G+
Sbjct: 307 QLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGK 366

Query: 364 GLRCIISM 371
            +R ++S+
Sbjct: 367 CIRTVLSL 374

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  609 bits (1574), Expect = 0.0
 Identities = 163/364 (44%), Positives = 236/364 (64%), Gaps = 4/364 (1%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAVAWE  KPL ++ + VAPP+A EVRIKI  + +C +D    +    +  FP I GHEA
Sbjct: 12  AAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSK-FPVILGHEA 70

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
            GVVES+G GV+ ++ GD V+P+F  +CG CR C+S  SN C+   +    G+M  D  S
Sbjct: 71  VGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMA-DMTS 129

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+P+ + +GTSTF+EYTVV    VAKI+P APL+  C++ CG +TG GA +N AK
Sbjct: 130 RFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLES-CLIGCGFATGYGAAVNTAK 188

Query: 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
              GS+ AVFGLG VG +A  G + AGASRIIGV     +F +A + G T+ +N  ++D+
Sbjct: 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDK 248

Query: 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 305
           PI EVI E TNGGVD +VEC G I+ M++A +  + G GV V++G+ S +      P+ +
Sbjct: 249 PIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLL 308

Query: 306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365
           L  R+LKG+ FG +K   ++  +VD YM K++ +   ++ ++   +INKAFE +  G+G+
Sbjct: 309 LTGRSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQGV 367

Query: 366 RCII 369
           R I+
Sbjct: 368 RSIM 371

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  516 bits (1332), Expect = 0.0
 Identities = 111/374 (29%), Positives = 179/374 (47%), Gaps = 10/374 (2%)

Query: 1   MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRI 60
           +    AAV    G    +Q +++  PQ  EV +K+  T +C TDL   + K   P  P +
Sbjct: 4   LKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVP-LPAV 62

Query: 61  FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 120
            GHE +G++E++G  V++L+VGDHV+  +   CG C  C +     C         G   
Sbjct: 63  LGHEGSGIIEAIGPNVTELQVGDHVVLSYG-YCGKCTQCNTGNPAYCSEFFGRNFSGADS 121

Query: 121 ADGQSRFSINGEPV--NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 178
            +G      + + V  +HF   S+F+ Y +       K+    P++ +  L CG+ TG G
Sbjct: 122 -EGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAG 180

Query: 179 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 238
           A +N  K    SS   +G GAVGL+A   A++ GAS II VD    R E AK+ G T  +
Sbjct: 181 ACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVI 240

Query: 239 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 298
           N+   D      I E+T+GGV+ ++E TG+ + +    + +    G   +VG P      
Sbjct: 241 NSKTQD--PVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTA 297

Query: 299 MTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 357
                ++L   +T+ G   G+  P+  +P +V +Y   +   ++ +     F EIN+A  
Sbjct: 298 QFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAI 356

Query: 358 YMVKGEGLRCIISM 371
              KG  L+ II +
Sbjct: 357 DSRKGITLKPIIKI 370

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  447 bits (1151), Expect = e-157
 Identities = 94/378 (24%), Positives = 154/378 (40%), Gaps = 29/378 (7%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           A V  +  +PL+ ++ E++      + ++I    +C +D++ +  +      P I GHE 
Sbjct: 20  AMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEG 79

Query: 66  AGVVESVGEGVSD-----LEVGDHVLPVFTGECGDCRHCRS-DVSNMCDLLRINPVRGVM 119
           AG V  V     D     L+ GD ++      CG+C  C+      +C        +   
Sbjct: 80  AGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCP-----NRKVYG 134

Query: 120 LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVSTGLG 178
           +  G S +        H  G   +S + V+     V K++    LD + +  C  +T   
Sbjct: 135 INRGCSEYP-------HLRGC--YSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYH 185

Query: 179 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 238
           A     +   G +V + G G +GL     AR  GA  +I +  S  R + A++ G    +
Sbjct: 186 AFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTL 245

Query: 239 NTSEHDR-PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 296
           N  E      ++ I ++T+G G D  +E TG+   ++   E +  G G   + GV     
Sbjct: 246 NRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQD 304

Query: 297 VFMTKPINVLNERTLKG-TFFGNY-KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINK 354
                P  V     LK  TF G +    +     V +       L K ITHR+P  E NK
Sbjct: 305 PV---PFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLLSKLITHRLPLKEANK 361

Query: 355 AFEYMVKGEGLRCIISME 372
           A E M   E L+ I+  E
Sbjct: 362 ALELMESREALKVILYPE 379

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  262 bits (672), Expect = 1e-85
 Identities = 78/364 (21%), Positives = 132/364 (36%), Gaps = 36/364 (9%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE--SKGQTPLFPRIFGH 63
           A    E G   ++ D+    P   E+ +K+    LC +D++  +  +       P   GH
Sbjct: 3   AVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGH 62

Query: 64  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 123
           E  G V  +GEGV+   VGD V       CG C  C     N C        R   L   
Sbjct: 63  EGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCT-------RAADLGIT 115

Query: 124 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP-LAPLDKVCILSCGVSTGLGATLN 182
                  G          + +EY +V S         L P+    +   G++     +  
Sbjct: 116 PPGLGSPG----------SMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRV 165

Query: 183 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 242
           +     GS+  V G+G +G    +  R   A+R+I VD    R   A++ G    V +  
Sbjct: 166 LPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA 225

Query: 243 HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK 301
                 + I E+T G G     +  G    + +A + V    G   +VG+ +       K
Sbjct: 226 G---AADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAGA---HAK 278

Query: 302 PIN--VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 359
                +    ++   ++G    R++L  VV +    +L++    T      E   A+  +
Sbjct: 279 VGFFMIPFGASVVTPYWGT---RSELMEVVALARAGRLDI---HTETFTLDEGPAAYRRL 332

Query: 360 VKGE 363
            +G 
Sbjct: 333 REGS 336

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  236 bits (604), Expect = 2e-75
 Identities = 94/377 (24%), Positives = 153/377 (40%), Gaps = 53/377 (14%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPL-FPRIFG 62
           A       + L + D  V  P   E+ ++++  S+C TDL  + W++  +  +  P + G
Sbjct: 3   ALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTG 62

Query: 63  HEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRSDVSNMCDLLRINPVRGV 118
           HE +GVVE+VG GV   +VGDHV    + E    C  C  CR+   ++C   +       
Sbjct: 63  HEFSGVVEAVGPGVRRPQVGDHV----SLESHIVCHACPACRTGNYHVCLNTQ------- 111

Query: 119 MLADGQSRFSINGEPVNHFLGTS---TFSEYTVVHSGCVAKINPLAPLDKVCI---LSCG 172
                              LG      F+EY VV +          P +   I       
Sbjct: 112 ------------------ILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNA 153

Query: 173 VSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF 232
           V      T+       G SV + G G +GL AA   R +GA  I+  D +  R   A+ +
Sbjct: 154 V-----HTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY 208

Query: 233 GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 292
                VN  E D  + EV+  +T  GV+  +E +GN   +      +  G G A ++G+P
Sbjct: 209 A-DRLVNPLEED--LLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIP 264

Query: 293 SKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI 352
           S    F      V+   T  G      +          +  + +++L   +THR+P S  
Sbjct: 265 SDPIRFDLAGELVMRGITAFGIA--GRRLWQTWMQGTALVYSGRVDLSPLLTHRLPLSRY 322

Query: 353 NKAFEYMVKGEGLRCII 369
            +AF  +  G+ ++ I+
Sbjct: 323 REAFGLLASGQAVKVIL 339

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  236 bits (604), Expect = 2e-75
 Identities = 100/382 (26%), Positives = 158/382 (41%), Gaps = 55/382 (14%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPL-FPRIFG 62
           A +  + G    + +V+V  P   EV IK+  TS+C TDL  Y W    Q+ +  P+I G
Sbjct: 7   AIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMG 66

Query: 63  HEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRSDVSNMCDLLRINPVRGV 118
           HE AG V  +G GV  +EVGD+V    + E    CG C  CR    ++C   +       
Sbjct: 67  HEVAGEVVEIGPGVEGIEVGDYV----SVETHIVCGKCYACRRGQYHVCQNTK------- 115

Query: 119 MLADGQSRFSINGEPVNHFLGTST---FSEYTVVHSGCVAKINPLAPLDKVCI---LSCG 172
                               G  T   F+EY VV +  + K     P +   +   L   
Sbjct: 116 ------------------IFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNA 157

Query: 173 VSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF 232
           V T L   +       G SV + G G +GL     A+ +GA  +I  + S  R E AKK 
Sbjct: 158 VDTVLAGPI------SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV 211

Query: 233 GVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV 291
           G    +N  E D  + + + ++T+G GVD  +E +G    +    + V    G   L+G+
Sbjct: 212 GADYVINPFEED--VVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGL 268

Query: 292 PSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP-FS 350
                      + +    T+ G             +V  +  + +L L+  ITH+   F 
Sbjct: 269 YPGKVTIDFNNLIIFKALTIYGIT--GRHLWETWYTVSRLLQSGKLNLDPIITHKYKGFD 326

Query: 351 EINKAFEYMVKGEGLRCIISME 372
           +  +AFE M  G+  + +  ++
Sbjct: 327 KYEEAFELMRAGKTGKVVFMLK 348

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  233 bits (597), Expect = 2e-74
 Identities = 80/371 (21%), Positives = 139/371 (37%), Gaps = 50/371 (13%)

Query: 7   AVAWEAGKPLIIQDVEV-APPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           +V  +    + + +  +       EVR+KI  + LC +DL     K     +P   GHE 
Sbjct: 3   SVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIF-KNGAHYYPITLGHEF 61

Query: 66  AGVVESVGEGVSDLEVGDHVL--PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 123
           +G +++VG GV DL  GD V   P+    C  C  C     + C                
Sbjct: 62  SGYIDAVGSGVDDLHPGDAVACVPLLP--CFTCPECLKGFYSQCAKYD------------ 107

Query: 124 QSRFSINGEPVNHFLGTS---TFSEYTVVHSGCVAKINPLAPLDKVCI---LSCGVSTGL 177
                        F+G+     F+EY VV    V  +    P++       ++ G+    
Sbjct: 108 -------------FIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGL---- 150

Query: 178 GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 237
               ++A+     +V + G G +GL A + A   GA  +  +D SS++   AK FG    
Sbjct: 151 -HAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQT 209

Query: 238 VNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 296
            N+SE      ++ + +         +E  G    +  A E          LVG   +D 
Sbjct: 210 FNSSEMS--APQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGTLHQDL 266

Query: 297 VFMTKPIN--VLNERTLKGTF--FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI 352
              +      +  E T+ G++  + +  P  +  +   +   ++L LE  I HR  F   
Sbjct: 267 HLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESF 326

Query: 353 NKAFEYMVKGE 363
            +A   + +  
Sbjct: 327 AQAVRDIARNA 337

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  232 bits (594), Expect = 1e-73
 Identities = 85/382 (22%), Positives = 153/382 (40%), Gaps = 54/382 (14%)

Query: 1   MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPR 59
             S   AV  E+   + +++V +  P   ++ +K++   +C TD +     G+ P   P 
Sbjct: 20  FQSMMKAVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLH--GEFPSTPPV 77

Query: 60  IFGHEAAGVVESVGEGVSDLEVGDHVL--PVFTGECGDCRHCRSDVSNMCDLLRINPVRG 117
             GHE  G+V   G  V D+  G  +   P  +  CG C  C++   N+C  LR      
Sbjct: 78  TLGHEFCGIVVEAGSAVRDIAPGARITGDPNIS--CGRCPQCQAGRVNLCRNLR------ 129

Query: 118 VMLADGQSRFSINGEPVNHFLGTST---FSEYTVVHSGCVAKINPLAPLDKVCI---LSC 171
                               +G      F+EY +V      +I              L+C
Sbjct: 130 -------------------AIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLAC 170

Query: 172 GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 231
            +       ++++  + GS+VA+ G G +GL   + AR+AGA+ +I   R + +   A++
Sbjct: 171 CL-----HGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEE 225

Query: 232 FGVTDFVNTSEHDRPIQEVIAEMTNG---GVDRSVECTGNIDNMISAFECVHDGWGVAVL 288
            G T  V+ S  D  + E IA        GVD  +EC G  + +  +      G G  V+
Sbjct: 226 VGATATVDPSAGD--VVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVI 282

Query: 289 VGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI 347
           +GV  +      +P ++L  E  + G+F   +          D+     +E+++ I+ RI
Sbjct: 283 LGVLPQGEKVEIEPFDILFRELRVLGSFINPF----VHRRAADLVATGAIEIDRMISRRI 338

Query: 348 PFSEINKAFEYMVKGEGLRCII 369
              E             ++ ++
Sbjct: 339 SLDEAPDVISNPAAAGEVKVLV 360

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  230 bits (588), Expect = 5e-73
 Identities = 85/368 (23%), Positives = 151/368 (41%), Gaps = 45/368 (12%)

Query: 6   AAVAWEAGKPLIIQDVEV-APPQAMEVRIKIKYTSLCRTDLYFWE---SKGQTPLFPRIF 61
           AA   E  KPL I+DV+        +V ++I    +C TDL+  +    +   P  P   
Sbjct: 18  AARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTL 77

Query: 62  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 121
           GHE  G +E V EGV  LE GD V+       G C  CR+     C+ L           
Sbjct: 78  GHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEF--------- 128

Query: 122 DGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN---PLAPLDKVCILSCGVSTGLG 178
                 +I+G           F+E+       V K+        L ++  L+    T   
Sbjct: 129 ---PGLNIDG----------GFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYR 175

Query: 179 ATLNVAKP--ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 236
           A +  A      G+ VA+ G+G +G  A +  ++   + +I +D   ++ + A++ G   
Sbjct: 176 A-VKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADH 234

Query: 237 FVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 295
            V+      P+++V+ E+T G GV+ +++  G+   +      +    G  ++VG   + 
Sbjct: 235 VVDARRD--PVKQVM-ELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGYGGEL 290

Query: 296 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKA 355
                    + +E + +G+  GN     +L  +V + +  ++ +E          EIN  
Sbjct: 291 RFPT--IRVISSEVSFEGSLVGN---YVELHELVTLALQGKVRVE---VDIHKLDEINDV 342

Query: 356 FEYMVKGE 363
            E + KGE
Sbjct: 343 LERLEKGE 350

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  218 bits (559), Expect = 1e-68
 Identities = 83/383 (21%), Positives = 152/383 (39%), Gaps = 59/383 (15%)

Query: 7   AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF----PRIFG 62
           ++       L +++  +  P   EV +++    +C +D+++WE  G+   F    P + G
Sbjct: 10  SLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWE-YGRIGNFIVKKPMVLG 68

Query: 63  HEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRSDVSNMCDLLRINPVRGV 118
           HEA+G VE VG  V  L+ GD V      E      +   C+    N+   +        
Sbjct: 69  HEASGTVEKVGSSVKHLKPGDRV----AIEPGAPRENDEFCKMGRYNLSPSIF---FCAT 121

Query: 119 MLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI---LSCGVST 175
              DG                      +   ++    K+      ++  +   LS G+  
Sbjct: 122 PPDDG------------------NLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGI-- 161

Query: 176 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 235
                        G  V V G G +G+     A+  GA++++  D S+ R  +AK+ G  
Sbjct: 162 ---HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGAD 218

Query: 236 DFVNTSEHDRPIQEVIAEMTN---GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 292
             +  S+     QE+  ++        + ++ECTG   ++ +       G G  VLVG+ 
Sbjct: 219 LVLQISKES--PQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLG 275

Query: 293 SKDAVFMTKPIN--VLNERTLKGTF-FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF 349
           S+       P+    + E  +KG F + N       P  + M  +K + ++  +THR P 
Sbjct: 276 SEMTTV---PLLHAAIREVDIKGVFRYCN-----TWPVAISMLASKSVNVKPLVTHRFPL 327

Query: 350 SEINKAFEYMVKGEGLRCIISME 372
            +  +AFE   KG GL+ ++  +
Sbjct: 328 EKALEAFETFKKGLGLKIMLKCD 350

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  220 bits (562), Expect = 1e-68
 Identities = 76/399 (19%), Positives = 140/399 (35%), Gaps = 68/399 (17%)

Query: 4   TAAAVAWEAGKPLIIQDVEV-APPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPL---- 56
           T           + +++V      +  E+ IK+K   +C +D+     + +G        
Sbjct: 30  TWLGSKVWRYPEVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLT 89

Query: 57  -FPRIFGHEAAGVVESVGEGVSD------LEVGDHVL--PVFTGECGDCRHCRSDVSNMC 107
            FP   GHE +GVV   G    +       E+G+ V    +    CG CR C     N C
Sbjct: 90  GFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLW--CGHCRPCAEGFPNHC 147

Query: 108 DLLRINPVRGVMLADGQSRFSINGEPVNHFLGTS---TFSEYTVVHSGCVAKINPLAPLD 164
           + L                           LG +    F+EY  V +     +  L  + 
Sbjct: 148 ENLN-------------------------ELGFNVDGAFAEYVKVDAKYAWSLRELEGVY 182

Query: 165 KVCI----------LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS 214
           +              S   +      +       G +V + G G +GLAA    + AGAS
Sbjct: 183 EGDRLFLAGSLVEPTSVAYN---AVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGAS 239

Query: 215 RIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMI 273
           ++I  + S  R   AK+ G    ++ ++ +    E + + TNG G    +E TG    + 
Sbjct: 240 KVILSEPSEVRRNLAKELGADHVIDPTKEN--FVEAVLDYTNGLGAKLFLEATGVPQLVW 297

Query: 274 SAFECV-HDGWGVAVLVGVPSKDAVFMTKPIN--VLNERTLKGTFFGNYKPRTDLPSVVD 330
              E V     G+   V + ++    +        +    + G+    +      P V+ 
Sbjct: 298 PQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGSQ--GHSGHGTFPRVIS 355

Query: 331 MYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 369
           + M   +++ K I+  +   EI +  + +   + L  + 
Sbjct: 356 L-MASGMDMTKIISKTVSMEEIPEYIKRLQTDKSLVKVT 393

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  215 bits (549), Expect = 3e-67
 Identities = 83/367 (22%), Positives = 148/367 (40%), Gaps = 40/367 (10%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE--------SKGQTPLF 57
           A    E GKPL +Q++ V  P+  +V IK++   +C +D++  +         +      
Sbjct: 3   AVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKL 62

Query: 58  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 117
           P   GHE AG +E VG+ V     GD V        G+C +CR    ++CD  R      
Sbjct: 63  PVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLG--- 119

Query: 118 VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 177
                     + +G           ++EY +V               +   L+C   T  
Sbjct: 120 ---------INFDG----------AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTY 160

Query: 178 GATLNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 236
            A +  A  +   ++ V G  G +G  A + A+    + IIGVD   +  E AK+ G   
Sbjct: 161 RA-VRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADY 219

Query: 237 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 296
            +N S  D P+ E+     + GVD  ++   +   +    + +    G  V+VG+   D 
Sbjct: 220 VINASMQD-PLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGADL 277

Query: 297 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 356
            +    I  L+E    G+  GN   ++D   ++ +   +  +++  IT  +   E N+A 
Sbjct: 278 HYHAPLI-TLSEIQFVGSLVGN---QSDFLGIMRLA--EAGKVKPMITKTMKLEEANEAI 331

Query: 357 EYMVKGE 363
           + +   +
Sbjct: 332 DNLENFK 338

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  212 bits (543), Expect = 4e-66
 Identities = 80/378 (21%), Positives = 136/378 (35%), Gaps = 57/378 (15%)

Query: 4   TAAAVAWEAGKPLIIQDVEVAP-PQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF----P 58
                 W +     ++ V+     +  EV + ++ T +C +D++FW+  G          
Sbjct: 15  NPQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWK-HGCIGPMIVECD 73

Query: 59  RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRSDVSNMCDLLRINP 114
            + GHE+AG V +V   V  ++VGD V      E    C  C  C +   N C+ +    
Sbjct: 74  HVLGHESAGEVIAVHPSVKSIKVGDRV----AIEPQVICNACEPCLTGRYNGCERVD--- 126

Query: 115 VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI--LSCG 172
                   G                      Y    +    KI  ++  +   +  LS  
Sbjct: 127 FLSTPPVPG------------------LLRRYVNHPAVWCHKIGNMSYENGAMLEPLSVA 168

Query: 173 VSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF 232
           +     A L  A    G  V + G G +GL     A+ AGA  ++  D    R + AK+ 
Sbjct: 169 L-----AGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI 223

Query: 233 GVTDFVNTSEHDRP--IQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLV 289
                 +  E        + I E   G     ++ECTG   ++ +A   V  G G   ++
Sbjct: 224 CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG-GKVFVI 282

Query: 290 GVPSKDAVFMTKPIN--VLNERTLKGTF-FGNYKPRTDLPSVVDMYMNKQLELEKFITHR 346
           GV   +      P     + E  L+  + + N       P  + +  N  ++L + +THR
Sbjct: 283 GVGKNEIQI---PFMRASVREVDLQFQYRYCN-----TWPRAIRLVENGLVDLTRLVTHR 334

Query: 347 IPFSEINKAFEYMVKGEG 364
            P  +  KAFE     + 
Sbjct: 335 FPLEDALKAFETASDPKT 352

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  207 bits (530), Expect = 2e-64
 Identities = 91/370 (24%), Positives = 155/370 (41%), Gaps = 42/370 (11%)

Query: 1   MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE--SKGQTPLFP 58
           M  + AA+  +  +PL I+DV +  PQ  EV I+I    +CRTDL  W+     Q    P
Sbjct: 1   MVKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLP 60

Query: 59  RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGV 118
            I GHE AG +  VGE ++ ++ GD+V+   T     CR+CR    N+C    I    G 
Sbjct: 61  IILGHENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIP---G- 115

Query: 119 MLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 178
                    + NG           FSEY +V S             +   L+   +T +G
Sbjct: 116 --------QTTNG----------GFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMG 157

Query: 179 A---TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKFGV 234
           A    L          V V G+G + +   +  +    +  I+G+ RS K  + A + G 
Sbjct: 158 AIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGA 217

Query: 235 TDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 293
                  +     + +I ++T+G G   +++  G  +   +  + +    G  +LVG+  
Sbjct: 218 DYVSEMKD----AESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGMEG 272

Query: 294 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 353
           K           +  + L G+ +G+     DL  VV +  + +++       ++P  +IN
Sbjct: 273 KRVSLEAFDT-AVWNKKLLGSNYGS---LNDLEDVVRLSESGKIKP---YIIKVPLDDIN 325

Query: 354 KAFEYMVKGE 363
           KAF  + +G 
Sbjct: 326 KAFTNLDEGR 335

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  205 bits (525), Expect = 1e-63
 Identities = 85/383 (22%), Positives = 148/383 (38%), Gaps = 62/383 (16%)

Query: 1   MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF--- 57
           M+S   +        L ++   +  P+  EV +++ Y  +C +D++++E  G+   F   
Sbjct: 1   MASDNLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYE-HGRIADFIVK 59

Query: 58  -PRIFGHEAAGVVESVGEGVSDLEVGDHVL--PVFTGECGDCRHCRSDVSNMCDLLRINP 114
            P + GHEA+G V  VG+ V  L+ GD V   P     C  C+ C+    N+C  L    
Sbjct: 60  DPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVP--CRRCQFCKEGKYNLCPDLT--- 114

Query: 115 VRGVMLADGQSRFSINGEPVNHFLGTS----TFSEYTVVHSGCVAKINPLAPLDK-VCI- 168
                                 F  T       + Y V  +    K+     L++   + 
Sbjct: 115 ----------------------FCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLE 152

Query: 169 -LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE 227
            LS GV          A  + G++V V G G +GL +   A+  GA  ++   RS +R E
Sbjct: 153 PLSVGV-----HACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLE 206

Query: 228 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNG---GVDRSVECTGNIDNMISAFECVHDGWG 284
            AK  G    +           +I  + +      + +++C+GN   +         G G
Sbjct: 207 VAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-G 265

Query: 285 VAVLVGVPSKDAVFMTKPIN--VLNERTLKGTF-FGNYKPRTDLPSVVDMYMNKQLELEK 341
             +LVG+ S+       P+      E  +K  F + N     D P  ++M  + +  +++
Sbjct: 266 TLMLVGMGSQMVTV---PLVNACAREIDIKSVFRYCN-----DYPIALEMVASGRCNVKQ 317

Query: 342 FITHRIPFSEINKAFEYMVKGEG 364
            +TH     +   AFE   K   
Sbjct: 318 LVTHSFKLEQTVDAFEAARKKAD 340

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  197 bits (504), Expect = 2e-60
 Identities = 71/369 (19%), Positives = 120/369 (32%), Gaps = 46/369 (12%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPL-FPRIFG 62
           A          ++ +     P++ E  ++     +C TD         G        + G
Sbjct: 3   AIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLG 62

Query: 63  HEAAGVVESVGEGVSDLEVGDHVL--PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 120
           HEA GVV  V    ++LE GD V+         G   +   D  +M           V  
Sbjct: 63  HEAVGVV--VDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGA 120

Query: 121 ADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI--LSCGV-STGL 177
             G                    SE+       + +I          I  +S    +   
Sbjct: 121 -HG------------------YMSEFFTSPEKYLVRIPRSQAELGFLIEPISITEKALEH 161

Query: 178 GATLNVAKPERGSSVAVFGLGAVGLAAAEGARI--AGASRIIGV---DRSSKRFEEAKKF 232
                 A     SS  V G G++GL      ++   G   +  +   DR     +  ++ 
Sbjct: 162 AYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEEL 221

Query: 233 GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 292
             T +V++ +      E + ++    +D   E TG   + I + + +    GV  L+GVP
Sbjct: 222 DAT-YVDSRQTP---VEDVPDVY-EQMDFIYEATGFPKHAIQSVQALAPN-GVGALLGVP 275

Query: 293 SKDAVFMTKPIN----VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP 348
           S  A  +         VL+ + L G+   N        + V      +  LE  +T   P
Sbjct: 276 SDWAFEVDAGAFHREMVLHNKALVGSV--NSHVEHFEAATVTFTKLPKWFLEDLVTGVHP 333

Query: 349 FSEINKAFE 357
            SE   AF+
Sbjct: 334 LSEFEAAFD 342

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  196 bits (499), Expect = 1e-59
 Identities = 65/389 (16%), Positives = 118/389 (30%), Gaps = 55/389 (14%)

Query: 6   AAVAWEAGKPLIIQDVEV-APPQAMEVRIKIKYTSLCRTDL-----YFWESKGQTPLFPR 59
           A +       + ++DV+        +++I+  Y  +C  D          S         
Sbjct: 3   AIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFL 62

Query: 60  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 119
           + GHEA GVVE    G S    GD V+PV    CG CR+C     + C+        G+ 
Sbjct: 63  VLGHEAIGVVEESYHGFS---QGDLVMPVNRRGCGICRNCLVGRPDFCETGEFG-EAGIH 118

Query: 120 LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI--LSCGV---- 173
             DG                     E+       + KI        +    L+       
Sbjct: 119 KMDG------------------FMREWWYDDPKYLVKIPKSIEDIGILAQPLADIEKSIE 160

Query: 174 -----STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE 228
                   +              V V G G +G+      R  G    +   R     E+
Sbjct: 161 EILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQ 220

Query: 229 AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG-NIDNMISAFECVHDGWGVAV 287
                       S +     + + +   G  D  ++ TG +++ + +    +    GV  
Sbjct: 221 TVIEETKTNYYNSSNG---YDKLKDSV-GKFDVIIDATGADVNILGNVIPLLGRN-GVLG 275

Query: 288 LVGVPSKDAV-FMTKPIN--VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE----LE 340
           L G  +  +V    K +   V   +T+ G   G    +      V    + +       +
Sbjct: 276 LFGFSTSGSVPLDYKTLQEIVHTNKTIIGLVNGQ---KPHFQQAVVHLASWKTLYPKAAK 332

Query: 341 KFITHRIPFSEINKAFEYMVKGEGLRCII 369
             IT  +  ++  +  + + + E     I
Sbjct: 333 MLITKTVSINDEKELLKVLREKEHGEIKI 361

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  189 bits (482), Expect = 3e-57
 Identities = 80/368 (21%), Positives = 131/368 (35%), Gaps = 48/368 (13%)

Query: 7   AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAA 66
             A  +   +   + E   P   +  ++    + C +D++             I GHEA 
Sbjct: 3   GFAMLSIGKVGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAV 62

Query: 67  GVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSR 126
           G V  VG  V D + GD V+             +         +               +
Sbjct: 63  GEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGM-----------LAGWK 111

Query: 127 FS--INGEPVNHFLGTSTFSEYTVVH---SGCVAKINPLAPLDKVCILSCGVSTGLGATL 181
           FS   +G           F E+  V+         +    PL+   ++   ++TG     
Sbjct: 112 FSNVKDG----------VFGEFFHVNDADMNLA-HLPKEIPLEAAVMIPDMMTTGFHGAE 160

Query: 182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 241
             A  + G +V V G+G VGL +  GA   GA RI  V       + A ++G TD +N  
Sbjct: 161 L-ANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYK 219

Query: 242 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 300
             D  I E I + T+G GVD+ V   G++     A + +  G      V           
Sbjct: 220 NGD--IVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVNYLG------- 269

Query: 301 KPINVLNERTLKGTFFGNYK--------PRTDLPSVVDMYMNKQLELEKFITHRIP-FSE 351
           +  N+   R+  G   G+           R  +  ++D+   K+++  K +TH    F  
Sbjct: 270 EGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLIDLVFYKRVDPSKLVTHVFRGFDN 329

Query: 352 INKAFEYM 359
           I KAF  M
Sbjct: 330 IEKAFMLM 337

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  179 bits (456), Expect = 2e-53
 Identities = 96/364 (26%), Positives = 147/364 (40%), Gaps = 45/364 (12%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIFGHE 64
           AAV    G PL I +V V  P   +V++KI+ + +C TDL+  +      P  P I GHE
Sbjct: 5   AAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHE 64

Query: 65  AAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 123
             G V +VG GVS ++ GD V +P     CG C HC      +C+  +            
Sbjct: 65  GVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQN----------- 113

Query: 124 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSC-GVSTGLGATLN 182
            + +S+NG           + EY V     V  +       ++  + C GV T     L 
Sbjct: 114 -TGYSVNG----------GYGEYVVADPNYVGLLPDKVGFVEIAPILCAGV-TVYKG-LK 160

Query: 183 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 242
           V     G  V + G+G +G  A + AR  G  R+  VD    +   A++ G    VN  +
Sbjct: 161 VTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNARD 219

Query: 243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA---VFM 299
            D P   +  E+  GG    +    +      A   V  G G   L G+P  D    +F 
Sbjct: 220 TD-PAAWLQKEI--GGAHGVLVTAVSPKAFSQAIGMVRRG-GTIALNGLPPGDFGTPIFD 275

Query: 300 TKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 359
                VL   T++G+  G    R+DL   +D   +  +   K         ++N  F  +
Sbjct: 276 V----VLKGITIRGSIVGT---RSDLQESLDFAAHGDV---KATVSTAKLDDVNDVFGRL 325

Query: 360 VKGE 363
            +G+
Sbjct: 326 REGK 329

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  176 bits (450), Expect = 1e-52
 Identities = 109/380 (28%), Positives = 170/380 (44%), Gaps = 56/380 (14%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIFGHE 64
           AAV  +  +PL I++VE       EV ++IK   +C TDL+         P  P I GHE
Sbjct: 3   AAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHE 62

Query: 65  AAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 123
             G+VE VG GV+ L+VGD V +P     CG C +C S    +C+  +            
Sbjct: 63  GVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKN----------- 111

Query: 124 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSC-GVSTGLGATLN 182
            + +S++G           ++EY    +  V KI      ++   + C GV+T     L 
Sbjct: 112 -AGYSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKA--LK 158

Query: 183 VAKPERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 237
           V   + G  VA++G+G     AV  A A G        ++ VD   ++ E AK+ G    
Sbjct: 159 VTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL------NVVAVDIGDEKLELAKELGADLV 212

Query: 238 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-- 295
           VN  + D    + + E   GGV  +V    +     SA+  +  G G  VLVG+P ++  
Sbjct: 213 VNPLKED--AAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEEMP 268

Query: 296 -AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINK 354
             +F T    VLN   + G+  G    R DL   +      ++   K I    P  +IN+
Sbjct: 269 IPIFDT----VLNGIKIIGSIVGT---RKDLQEALQFAAEGKV---KTIIEVQPLEKINE 318

Query: 355 AFEYMVKGEGL-RCIISMED 373
            F+ M+KG+   R ++++ED
Sbjct: 319 VFDRMLKGQINGRVVLTLED 338

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  175 bits (446), Expect = 5e-52
 Identities = 85/373 (22%), Positives = 150/373 (40%), Gaps = 48/373 (12%)

Query: 1   MSSTA-AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFP 58
           +  T    + +E+   L  +D+ V  P+A E+ I +KY+ +C TDL+ W          P
Sbjct: 2   IPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLP 61

Query: 59  RIFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 117
            + GHE AGVV  +GE V   ++GD+  +    G C  C +C     + C    +     
Sbjct: 62  LVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADL----- 116

Query: 118 VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSC-GVSTG 176
                  S ++ +G          +F +Y    +   A I     L +V  + C G++  
Sbjct: 117 -------SGYTHDG----------SFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVY 159

Query: 177 LGATLNVAKPERGSSVAVFGLG------AVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 230
               L  A    G  VA+ G        AV  A A G       R++G+D    + E  +
Sbjct: 160 KA--LKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGY------RVLGIDGGEGKEELFR 211

Query: 231 KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 290
             G   F++ ++    +  V+   T+GG    +  + +   + ++   V    G  VLVG
Sbjct: 212 SIGGEVFIDFTKEKDIVGAVLKA-TDGGAHGVINVSVSEAAIEASTRYVRAN-GTTVLVG 269

Query: 291 VPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS 350
           +P+           V+   ++ G++ GN   R D    +D +    +   K     +  S
Sbjct: 270 MPAGAKCCSDVFNQVVKSISIVGSYVGN---RADTREALDFFARGLV---KSPIKVVGLS 323

Query: 351 EINKAFEYMVKGE 363
            + + +E M KG+
Sbjct: 324 TLPEIYEKMEKGQ 336

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score =  167 bits (425), Expect = 2e-48
 Identities = 73/389 (18%), Positives = 141/389 (36%), Gaps = 53/389 (13%)

Query: 14  KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFP-RIFGHEAAGVVESV 72
            P +  +        +   +K+  T++C +D + +   G+  +    + GHE  G V   
Sbjct: 21  YPKLEHNNRKLEHAVI---LKVVSTNICGSDQHIYR--GRFIVPKGHVLGHEITGEVVEK 75

Query: 73  GEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGE 132
           G  V  +++GD V   F   CG CR+C+   S++C+   +NP   +            G 
Sbjct: 76  GSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADL---------GAFGF 126

Query: 133 PVNHFLGTSTFSEYTVV---HSGCVA---KINPLAPLDKVCILSCGVSTGLGATLNVAKP 186
            +  + G    +EY +V       +    K   +  +  + ++S  + TG    ++ A  
Sbjct: 127 DLKGWSGGQ--AEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGCVS-AGV 183

Query: 187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP 246
           + GS V + G G VG  AA GAR+ GA+ +I  D++ +R +     G    ++      P
Sbjct: 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFET-IDLRNSA-P 241

Query: 247 IQEVIAEMTNG-GVDRSVECTG--------------NIDNMISAFECVHDGWGVAVLVGV 291
           +++ I ++     VD  V+  G                  + S F+ V  G  + +  G+
Sbjct: 242 LRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGI-PGI 300

Query: 292 PSKDAVFMTKPINVLNERTLK-GTFF--------GNYKPRTDLPSVVDMYMNKQLEL--E 340
                              L  G  +        G          + +  +  Q+    +
Sbjct: 301 YVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSK 360

Query: 341 KFITHRIPFSEINKAFEYMVKGEGLRCII 369
                 I   +    +    KG   + +I
Sbjct: 361 VMNIEVITLDQAPDGYAKFDKGSPAKFVI 389

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score =  163 bits (416), Expect = 5e-47
 Identities = 78/390 (20%), Positives = 136/390 (34%), Gaps = 55/390 (14%)

Query: 14  KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFP-RIFGHEAAGVVESV 72
            P +             V +K+  T++C +D +     G+T      + GHE  G V   
Sbjct: 21  YPKMQDPRGKKIEH--GVILKVVSTNICGSDQHMVR--GRTTAQVGLVLGHEITGEVIEK 76

Query: 73  GEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRF-SING 131
           G  V +L++GD V   F   CG CR C+   + +C    +NP R      G        G
Sbjct: 77  GRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCL--TVNPARAGGAY-GYVDMGDWTG 133

Query: 132 EPVNHFLGTSTFSEYTVV---HSGCVA---KINPLAPLDKVCILSCGVSTGLGATLNVAK 185
                       +EY +V       +    +   +  +  +  LS  + TG    +  A 
Sbjct: 134 ----------GQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAVT-AG 182

Query: 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245
              GS+V V G G VGLAAA  AR+ GA+ +I  D +  R   AK  G     + S    
Sbjct: 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEI-ADLSLDT- 240

Query: 246 PIQEVIAEMTNG-GVDRSVECTG---------------NIDNMISAFECVHDGWGVAVLV 289
           P+ E IA +     VD +V+  G                   + S  +       + +  
Sbjct: 241 PLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGI-P 299

Query: 290 GVPSKDAVFMTKPINVLNERTLK-GTFF--------GNYKPRTDLPSVVDMYMNKQLELE 340
           G+   +          +   +++ G  +        G         +++   M  ++ + 
Sbjct: 300 GLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIA 359

Query: 341 K-FITHRIPFSEINKAFEYMVKGEGLRCII 369
           +      I   +  + +     G   + +I
Sbjct: 360 EVVGVQVISLDDAPRGYGEFDAGVPKKFVI 389

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  124 bits (313), Expect = 1e-32
 Identities = 79/370 (21%), Positives = 128/370 (34%), Gaps = 47/370 (12%)

Query: 1   MSSTAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-- 56
           MS      + E   P  L + +  V      ++ ++    SL   D      +    L  
Sbjct: 24  MSKWMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDK--LVLETGMGLDL 81

Query: 57  -FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 115
            FP +   + +GVVE+VG+ V+    GD V+  F     D     +  +   + L     
Sbjct: 82  AFPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETL----- 136

Query: 116 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 175
                          G       G    SEY V+  G            +   L C   T
Sbjct: 137 ---------------GGAHP---G--VLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLT 176

Query: 176 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 235
              A +       G  V V G G V L   + A+  GA  +I    S ++ + A   G  
Sbjct: 177 AWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGAD 235

Query: 236 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 294
             +N  E D    E +  +T   G D  +E  G    +  + + V    G   ++GV   
Sbjct: 236 HGINRLEED--WVERVYALTGDRGADHILEIAGG-AGLGQSLKAVAPD-GRISVIGVLEG 291

Query: 295 DAVFMTKPINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI 352
             V  + P+  L      ++G   G    R  L  +V      +L L+  I  R  F+E+
Sbjct: 292 FEV--SGPVGPLLLKSPVVQGISVG---HRRALEDLVGAV--DRLGLKPVIDMRYKFTEV 344

Query: 353 NKAFEYMVKG 362
            +A  ++ +G
Sbjct: 345 PEALAHLDRG 354

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  121 bits (307), Expect = 6e-32
 Identities = 77/367 (20%), Positives = 137/367 (37%), Gaps = 45/367 (12%)

Query: 6   AAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFG 62
           A V    G P  L + D+ V  P   EVR+++K  +L   D++  +      L  P + G
Sbjct: 3   AVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLG 62

Query: 63  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 122
            + +GVV++VG GV     GD V+      CG C  C +   N+C               
Sbjct: 63  ADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCP-------------- 108

Query: 123 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 182
              R+ I GE  +   G  T++EY V+    +A        ++   +     T     ++
Sbjct: 109 ---RYQILGEHRH---G--TYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVD 160

Query: 183 VAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 241
                 G  V V      V +AA + A++ GA R+I    S  +   AK  G  + VN +
Sbjct: 161 KLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNYT 219

Query: 242 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 300
             D    + +  +T G G D+ V+ TG         +   +G G   + G  S       
Sbjct: 220 HPD--WPKEVRRLTGGKGADKVVDHTGA-LYFEGVIKATANG-GRIAIAGASSGYEG--- 272

Query: 301 KPINV----LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 356
             +        + ++ G+       ++ L  ++      +L+    +   +P     +  
Sbjct: 273 -TLPFAHVFYRQLSILGSTMA---SKSRLFPILRFVEEGKLKP--VVGQVLPLEAAAEGH 326

Query: 357 EYMVKGE 363
             + +  
Sbjct: 327 RLLEERR 333

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score =  120 bits (304), Expect = 3e-31
 Identities = 90/396 (22%), Positives = 144/396 (36%), Gaps = 93/396 (23%)

Query: 1   MSSTAAAVAW---EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF 57
           M +      W   +    L      +      +V I+I    +C TDL+  ++      +
Sbjct: 4   MEAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNY 63

Query: 58  PRIFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVR 116
           P + GHE  G V  VG  VS   VGD V +    G CG C  C  D+   C        +
Sbjct: 64  PMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCP-------K 116

Query: 117 GVMLADGQSRFSINGEPVNHFLGTST---FSEYTVVHSGCVAKINPLAPLDKVCILSCGV 173
            +        +S N   +N   G  T   F++ TVVH   V KI     +++   L C  
Sbjct: 117 KI--------WSYNDVYIN---GQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCA- 164

Query: 174 STGLGATL-------NVAKPERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVDR 221
               G T+        + +P  G    + GLG      V +A A G  +   S       
Sbjct: 165 ----GVTVYSPLSHFGLKQP--GLRGGILGLGGVGHMGVKIAKAMGHHVTVISS-----S 213

Query: 222 SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD 281
           + KR E  +  G  D+V  S+          +M+        E   ++D +I      H 
Sbjct: 214 NKKREEALQDLGADDYVIGSDQA--------KMS--------ELADSLDYVIDTVPVHHA 257

Query: 282 GW----------GVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM 331
                       G  +L+GV +    F+T  + +L  + + G+F G+      +    +M
Sbjct: 258 -LEPYLSLLKLDGKLILMGVINNPLQFLTPLL-MLGRKVITGSFIGS------MKETEEM 309

Query: 332 YMNKQLEL--EKFITH---RIPFSEINKAFEYMVKG 362
                LE   EK ++     +    +N AFE + K 
Sbjct: 310 -----LEFCKEKGLSSIIEVVKMDYVNTAFERLEKN 340

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score =  120 bits (304), Expect = 3e-31
 Identities = 92/390 (23%), Positives = 139/390 (35%), Gaps = 89/390 (22%)

Query: 4   TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 63
             A  A+ A +PL   D+    P   +V+I+I Y  +C +DL+   S+    ++P + GH
Sbjct: 23  IKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGH 82

Query: 64  EAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 122
           E  G V +VG+ V     GD V +      C  C  C   + N CD              
Sbjct: 83  EIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCD-------------- 128

Query: 123 GQSRFSINGEPVNHFLGTST---FSEYTVVHSGCVAKI-NPLAPLDKVCILSCGVSTGLG 178
                + N           T   +S+  VVH   V +I +P   L  V  L C      G
Sbjct: 129 -HMTGTYNS--PTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCA-----G 180

Query: 179 ATL------NVAKPERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVDRSSKRFE 227
            T         A P  G  V V G+G      + LA A GA +   +       S  + E
Sbjct: 181 ITTYSPLRHWQAGP--GKKVGVVGIGGLGHMGIKLAHAMGAHVVAFT------TSEAKRE 232

Query: 228 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW---- 283
            AK  G  + VN+   D        EM             + D +++     H+      
Sbjct: 233 AAKALGADEVVNSRNAD--------EMA--------AHLKSFDFILNTVAAPHN-LDDFT 275

Query: 284 ------GVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL 337
                 G   LVG P+           ++  R + G+  G       +P   +M     L
Sbjct: 276 TLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGG------IPETQEM-----L 324

Query: 338 EL--EKFITH---RIPFSEINKAFEYMVKG 362
           +   E  I      I   +IN+A+E M++G
Sbjct: 325 DFCAEHGIVADIEMIRADQINEAYERMLRG 354

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  119 bits (301), Expect = 2e-30
 Identities = 56/389 (14%), Positives = 115/389 (29%), Gaps = 71/389 (18%)

Query: 14  KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-------------------- 53
           K L + +V +      EV + +  +S+    +  W +  +                    
Sbjct: 48  KSLRLGEVPMPELAPDEVLVAVMASSINYNTV--WSAMFEPIPTFHFLKQNARQGGWATR 105

Query: 54  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 113
                 + G + +GVV   G GV   + GDHV+ V      +          +    R  
Sbjct: 106 HDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVI-VHPAHVDEQEPATHGDGMLGTEQRA- 163

Query: 114 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 173
              G     G                    +EY VV +  +         ++  +     
Sbjct: 164 --WGFETNFG------------------GLAEYGVVRASQLLPKPAHLTWEEAAVSPLCA 203

Query: 174 STGLGA--TLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 230
            T      +   A+ ++G  V ++G  G +G  A +  +  G    + V  S+++    +
Sbjct: 204 GTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKEAAVR 262

Query: 231 KFGVTDFVNTSEHD----------------RPIQEVIAEMTNGGVDRSVECTGNIDNMIS 274
             G    +N +E                  R + +++ E      D   E TG       
Sbjct: 263 ALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGR-VTFGL 321

Query: 275 AFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMN 334
           +      G G  V  G  S            +  + + G+   N     +  +   ++ +
Sbjct: 322 SVIVARRG-GTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGAN---HEEQQATNRLFES 377

Query: 335 KQLELEKFITHRIPFSEINKAFEYMVKGE 363
             +     ++   P +E  +A   +    
Sbjct: 378 GAVVPA--MSAVYPLAEAAEACRVVQTSR 404

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score =  117 bits (295), Expect = 6e-30
 Identities = 81/385 (21%), Positives = 134/385 (34%), Gaps = 90/385 (23%)

Query: 9   AWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGV 68
           A +    L   +         +VR K+ Y  +C +DL+  ++     ++P + GHE  G 
Sbjct: 22  ARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGE 81

Query: 69  VESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRF 127
           V  VG  V  + VGD V +    G C  C  C +D+ N C                +   
Sbjct: 82  VTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCP---------------KMIL 126

Query: 128 SINGEPVNHFLGTST---FSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL--- 181
           +      +   GT T   +S + V +   + +     PLD    L C      G T+   
Sbjct: 127 TYASIYHD---GTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCA-----GITVYSP 178

Query: 182 ----NVAKPERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF 232
                + +P  G  + + GLG     AV  A A G+++   S        SK+ E  K F
Sbjct: 179 LKYFGLDEP--GKHIGIVGLGGLGHVAVKFAKAFGSKVTVIST-----SPSKKEEALKNF 231

Query: 233 GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW--------- 283
           G   F+ + + +        +M            G +D +I     VH            
Sbjct: 232 GADSFLVSRDQE--------QMQ--------AAAGTLDGIIDTVSAVHP-LLPLFGLLKS 274

Query: 284 -GVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLEL--E 340
            G  +LVG P K        + +   + + G+  G       +    +M     ++   +
Sbjct: 275 HGKLILVGAPEKPLELPAFSL-IAGRKIVAGSGIGG------MKETQEM-----IDFAAK 322

Query: 341 KFITH---RIPFSEINKAFEYMVKG 362
             IT     I    +N A E + K 
Sbjct: 323 HNITADIEVISTDYLNTAMERLAKN 347

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  115 bits (291), Expect = 2e-29
 Identities = 71/383 (18%), Positives = 126/383 (32%), Gaps = 77/383 (20%)

Query: 1   MSSTA-AAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTP 55
           M +   A V    G P   + ++++E+A  +  +VR+K+    +  +D+   +   G  P
Sbjct: 23  MPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLP 82

Query: 56  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 115
             P + G+E    V +VG  V+ L+ GD V+P   G                        
Sbjct: 83  ELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAG------------------------ 118

Query: 116 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 175
                                 LG  T+    V     + ++    PL     L     T
Sbjct: 119 ----------------------LG--TWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCT 154

Query: 176 GLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AK 230
                ++  + + G SV        VG A  + A   G  R I V R     ++     K
Sbjct: 155 AYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSDRLK 213

Query: 231 KFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLV 289
             G    +   E  RP  E+     +      ++ C G   +       +  G G  V  
Sbjct: 214 SLGAEHVITEEELRRP--EMKNFFKDMPQPRLALNCVGG-KSSTELLRQLARG-GTMVTY 269

Query: 290 GVPSKDAVFMTKPINVL--NERTLKGTFFGNYKPRTD-------LPSVVDMYMNKQLELE 340
           G  +K  V     +++L   +  L+G +   +K           + ++ D+    QL   
Sbjct: 270 GGMAKQPV--VASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAP 327

Query: 341 KFITHRIPFSEINKAFEYMVKGE 363
                ++P  +   A E  +K  
Sbjct: 328 --ACSQVPLQDYQSALEASMKPF 348

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score =  115 bits (290), Expect = 2e-29
 Identities = 79/394 (20%), Positives = 136/394 (34%), Gaps = 93/394 (23%)

Query: 1   MSSTAAA-VAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPR 59
           M   +     +   +     D         +V I I Y  +C +D++   S+ +  ++P 
Sbjct: 1   MRVQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPM 60

Query: 60  IFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGV 118
           I GHE AG+++ VG+GV   ++GD V +  F   C  C+ C+      C           
Sbjct: 61  IPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCT---------- 110

Query: 119 MLADGQSRFSINGEPVNHFLGTST---FSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 175
                +  F+ +     H         +S   VV    V  ++  APL+KV  L C    
Sbjct: 111 -----KVVFTYDCLDSFH-DNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCA--- 161

Query: 176 GLGATL------NVAKPERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVDRSSK 224
             G T       +      G+ V V G G     AV  A A GA ++  +R        K
Sbjct: 162 --GITTYSPLKFSKVTK--GTKVGVAGFGGLGSMAVKYAVAMGAEVSVFAR-----NEHK 212

Query: 225 RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD--- 281
           + ++A   GV  F    +                     +C   +D +IS     +D   
Sbjct: 213 K-QDALSMGVKHFYTDPK---------------------QCKEELDFIISTIPTHYDLKD 250

Query: 282 ------GWGVAVLVGVPSKDAVFMTKPINVL--NERTLKGTFFGNYKPRTDLPSVVDMYM 333
                   G   LVG+P  +   +    + +    R + G+  G       +    +M  
Sbjct: 251 YLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGG------IKETQEM-- 302

Query: 334 NKQLEL--EKFIT---HRIPFSEINKAFEYMVKG 362
              ++   +  I      I   +I+ A+  +  G
Sbjct: 303 ---VDFSIKHNIYPEIDLILGKDIDTAYHNLTHG 333

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  117 bits (294), Expect = 2e-29
 Identities = 59/402 (14%), Positives = 116/402 (28%), Gaps = 78/402 (19%)

Query: 6   AAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-------- 54
           A +      P   + + DV V      E  + +  +S+    +    S  +         
Sbjct: 45  AGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSV--HTSIFEPLSTFGFLE 102

Query: 55  ------------PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSD 102
                        L   + G + AGVV   G GV+  + GD V+        +     +D
Sbjct: 103 RYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHND 162

Query: 103 VSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 162
                +      + G     G                    +E  +V S  +        
Sbjct: 163 TMLDPE----QRIWGFETNFG------------------GLAEIALVKSNQLMPKPDHLS 200

Query: 163 LDKVCILSCGVSTGLGA--TLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV 219
            ++        ST      + N A  ++G +V ++G  G +G  A + A   GA   I V
Sbjct: 201 WEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICV 259

Query: 220 DRSSKRFEEAKKFGVTDFVNTSEHDRPIQ---------------EVIAEMTNG-GVDRSV 263
             S ++ E  +  G    ++ +                      + I E+T G  +D   
Sbjct: 260 VSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVF 319

Query: 264 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL--NERTLKGTFFGNYKP 321
           E  G  +   ++      G G        S            L  + + + G+ F N   
Sbjct: 320 EHPGR-ETFGASVFVTRKG-GTITTCASTSGYMH--EYDNRYLWMSLKRIIGSHFAN--- 372

Query: 322 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 363
             +      +    +  +   ++      +  +A   + +  
Sbjct: 373 YREAWEANRLI--AKGRIHPTLSKVYSLEDTGQAAYDVHRNL 412

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score =  103 bits (260), Expect = 3e-25
 Identities = 82/391 (20%), Positives = 133/391 (34%), Gaps = 92/391 (23%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           A  + E  K       +  P    ++ IKI+   +C +D++           P + GHE 
Sbjct: 11  AIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEI 70

Query: 66  AGVVESVGEGV-SDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 123
            G V  +G    S L+VG  V +      C +C  C++D    C        + V     
Sbjct: 71  VGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCT-------KFV----- 118

Query: 124 QSRFSINGEPVNHFLGTST---FSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT 180
               + +    +   G  +   ++ Y  VH   V  I    P      L CG     G T
Sbjct: 119 ---TTYSQPYED---GYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCG-----GLT 167

Query: 181 L------NVAKPERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVDRSSKRFEEA 229
           +      N   P  G  V + GLG        ++ A GA     SR      S KR E+A
Sbjct: 168 VYSPLVRNGCGP--GKKVGIVGLGGIGSMGTLISKAMGAETYVISR-----SSRKR-EDA 219

Query: 230 KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW------ 283
            K G   ++ T E          +          +     D ++     + D        
Sbjct: 220 MKMGADHYIATLEE--------GDWGE-------KYFDTFDLIVVCASSLTDIDFNIMPK 264

Query: 284 -----GVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE 338
                G  V + +P +  +   KP   L   ++  +  G+      +  +  +     L+
Sbjct: 265 AMKVGGRIVSISIPEQHEMLSLKPY-GLKAVSISYSALGS------IKELNQL-----LK 312

Query: 339 L--EKFITH---RIPFSE--INKAFEYMVKG 362
           L  EK I      +P  E  +++AFE M KG
Sbjct: 313 LVSEKDIKIWVETLPVGEAGVHEAFERMEKG 343

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score =  100 bits (252), Expect = 4e-24
 Identities = 69/393 (17%), Positives = 118/393 (30%), Gaps = 83/393 (21%)

Query: 2   SSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF 61
               A    +  +  +            +V ++++  ++  +D      +GQ        
Sbjct: 10  PQQTALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSD---TSMRGQFATPWAFL 66

Query: 62  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 121
           G + AG V +VG  V+ ++VGD V        G                   P +G    
Sbjct: 67  GTDYAGTVVAVGSDVTHIQVGDRV-------YGAQNEMCPR----------TPDQG---- 105

Query: 122 DGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST------ 175
                                FS+YTV      AKI      ++   L  G+ST      
Sbjct: 106 --------------------AFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMK 145

Query: 176 ----GLGATLNVAKPERGSSVAVF---GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE 228
                L +      P     V V    G  A      +  R++G   I     S   F+ 
Sbjct: 146 LLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC--SPHNFDL 203

Query: 229 AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWG-VAV 287
           AK  G  +  +       + + I   T   +  +++C  N+++    F  +    G    
Sbjct: 204 AKSRGAEEVFDY--RAPNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVS 261

Query: 288 LVGVPSKDAVFMTKPINVLNERTLKGTFFG---NYKPRTDLPSVVDM---------YMNK 335
           L   P   A        V  + TL  T FG    +      P   +             +
Sbjct: 262 LNPFPEHAA----TRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQ 317

Query: 336 QLELEKFITHRIP-----FSEINKAFEYMVKGE 363
            +E  + + H +      F  I +  E + KGE
Sbjct: 318 LVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGE 350

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 96.3 bits (240), Expect = 2e-22
 Identities = 66/404 (16%), Positives = 115/404 (28%), Gaps = 101/404 (25%)

Query: 1   MSSTAAAVAWEAGKP---LIIQDVEVAPPQ--AMEVRIKIKYTSLCRTDLYF-------- 47
           M +  A +  + G+P   L  Q  E+        EV +K   + +  +D+          
Sbjct: 1   MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSK 60

Query: 48  --WESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSN 105
               +   T       G+E    V  VG  VS LE GD V+P                  
Sbjct: 61  PAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFG------------ 108

Query: 106 MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 165
                                               T+  + + +     K+ P     K
Sbjct: 109 ------------------------------------TWRTHALGNDDDFIKL-PNPAQSK 131

Query: 166 VCILSCGVSTGLGATLNV------------AKPERGSSVAVF--GLGAVGLAAAEGARIA 211
                 G++   GAT++V             K   G    +   G  AVG  A++  ++ 
Sbjct: 132 ANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL 191

Query: 212 GASRIIGVDRSSKRFEE----AKKFGVTDFVNTSEHD-RPIQEVIAEMTN---GGVDRSV 263
                I V R     +E     K+ G T  +   +++ R     I E      G    ++
Sbjct: 192 NF-NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLAL 250

Query: 264 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL--NERTLKGTFFGNYKP 321
            C G   +       +++  G+ +  G  S   V  T P ++      T  G +      
Sbjct: 251 NCVGG-KSSTGIARKLNNN-GLMLTYGGMSFQPV--TIPTSLYIFKNFTSAGFWVTELLK 306

Query: 322 RT------DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 359
                    L  ++  Y   +L      +    +       E  
Sbjct: 307 NNKELKTSTLNQIIAWYEEGKLTDA--KSIETLYDGTKPLHELY 348

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 95.0 bits (237), Expect = 4e-22
 Identities = 65/373 (17%), Positives = 117/373 (31%), Gaps = 70/373 (18%)

Query: 1   MSSTA-AAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTP 55
           MS         + G P   L ++   + P +  EV +++    +  +DL           
Sbjct: 1   MSLHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRI 60

Query: 56  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 115
             P I G+E  G+VE+VG  VS   +G  VLP                            
Sbjct: 61  PLPNIPGYEGVGIVENVGAFVSRELIGKRVLP---------------------------- 92

Query: 116 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 175
                                  G  T+ EY    +  V  I           +     T
Sbjct: 93  ---------------------LRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLT 131

Query: 176 GLGATLNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 234
                      +R   + V     A+G   A+ ++I    R+I V R++K  EE  + G 
Sbjct: 132 AWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGA 190

Query: 235 TDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 293
              ++TS       E + E+TNG G D +++  G   +       +    G  + +G+ S
Sbjct: 191 AYVIDTSTAPLY--ETVMELTNGIGADAAIDSIGG-PDGNELAFSLRPN-GHFLTIGLLS 246

Query: 294 KDAVFMTKPINVLNERTLKGTFFGNYKPRTD-------LPSVVDMYMNKQLELEKFITHR 346
                    I    +         ++               ++ +  N+QL   K +   
Sbjct: 247 G-IQVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMK-VHST 304

Query: 347 IPFSEINKAFEYM 359
              +++  A + +
Sbjct: 305 YELADVKAAVDVV 317

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 81.5 bits (202), Expect = 2e-17
 Identities = 67/376 (17%), Positives = 115/376 (30%), Gaps = 93/376 (24%)

Query: 6   AAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLY-----FWESKGQTPLFP 58
           A    + G P  L + D      +  ++ IK+   SL   D        + +K      P
Sbjct: 9   AIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLP 68

Query: 59  RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGV 118
              G++ +G V  +G  V+++ +GD V        G                        
Sbjct: 69  SGLGYDFSGEVIELGSDVNNVNIGDKV-------MGI----------------------- 98

Query: 119 MLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI--N---------PLAPLDKVC 167
                                   ++EY       + +             P A L    
Sbjct: 99  ---------------AGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGL---- 139

Query: 168 ILSCGVSTGLGATLNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRF 226
                  T L A LN A+ ++G  V +    G VG  A + A+  G   +I    S +  
Sbjct: 140 -------TALQA-LNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNH 189

Query: 227 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVA 286
              K  G    +N  E D           +  VD  ++  G  D  I + +C+ +  G  
Sbjct: 190 AFLKALGAEQCINYHEED------FLLAISTPVDAVIDLVGG-DVGIQSIDCLKET-GCI 241

Query: 287 VLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHR 346
           V V   +       + I V  ++  +           +L  +  +    +L +E  I+  
Sbjct: 242 VSVPTITAG-----RVIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLRIE--ISRI 294

Query: 347 IPFSEINKAFEYMVKG 362
              SE   A E +  G
Sbjct: 295 FQLSEAVTAHELLETG 310

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 79.2 bits (196), Expect = 1e-16
 Identities = 75/367 (20%), Positives = 116/367 (31%), Gaps = 74/367 (20%)

Query: 6   AAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFG 62
           A  A     P  L+  DVE        V + +K   +C  D    + + Q  +  P + G
Sbjct: 24  AIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPG 83

Query: 63  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 122
            E AGVV S  EG S ++ GD V                                     
Sbjct: 84  IETAGVVRSAPEG-SGIKPGDRV-------MA---------------------------- 107

Query: 123 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 182
                         F     ++E   V    +    P     +   L     T   A   
Sbjct: 108 --------------FNFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYAR 153

Query: 183 VAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 241
             +   G +V V G  G +G AA + A+  GA ++I V   +   E  K  G    +   
Sbjct: 154 RGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIVLPLE 212

Query: 242 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 300
           E      + + E T G GVD  V+  G       A   +    G  ++VG  +      T
Sbjct: 213 EGWA---KAVREATGGAGVDMVVDPIGG-PAFDDAVRTLASE-GRLLVVGFAAGGIP--T 265

Query: 301 KPINVLNER--TLKGTFFGNY---KP---RTDLPSVVDMYMNKQLELEKFITHRIPFSEI 352
             +N L  R  +L G  +G +              +  +       +   ++ RIP SE 
Sbjct: 266 IKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG---MRPPVSARIPLSEG 322

Query: 353 NKAFEYM 359
            +A +  
Sbjct: 323 RQALQDF 329

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 75.4 bits (186), Expect = 3e-15
 Identities = 46/355 (12%), Positives = 105/355 (29%), Gaps = 66/355 (18%)

Query: 16  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIFGHEAAGVVESVGE 74
           L    + V  P   +V IK+   S+  +D+ F + + GQ  +  R  G E  G + + G+
Sbjct: 37  LEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGFEGVGTIVAGGD 96

Query: 75  GV-SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEP 133
              +   VG  V                                 +   G          
Sbjct: 97  EPYAKSLVGKRV----------------------------AFATGLSNWG---------- 118

Query: 134 VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVA 193
                   +++EY V  +     +      +    +     T +    ++ K E   +  
Sbjct: 119 --------SWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAM-FDIVKQEGEKAFV 169

Query: 194 VFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA 252
           +      +       A+  G  R I   R  ++    K  G    +N    D   +  + 
Sbjct: 170 MTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDIGAAHVLNEKAPD--FEATLR 226

Query: 253 EMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNER-T 310
           E+         ++         + F  +       ++ G    DA  + +P  ++ +   
Sbjct: 227 EVMKAEQPRIFLDAVTG-PLASAIFNAMPKR-ARWIIYGRLDPDATVIREPGQLIFQHKH 284

Query: 311 LKGTFFGNYKPRT------DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 359
           ++G +   +  +        +      + + +   +  +T  +P +E   A+   
Sbjct: 285 IEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWSTD--VTAVVPLAEA-IAWVPA 336

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 72.6 bits (179), Expect = 1e-14
 Identities = 45/387 (11%), Positives = 97/387 (25%), Gaps = 111/387 (28%)

Query: 6   AAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFG 62
               W        + +  V++    A ++ ++ +   +   D  F ++         + G
Sbjct: 4   QHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVPG 63

Query: 63  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 122
            + AGV+  VG  V    +G  V                                     
Sbjct: 64  VDGAGVIVKVGAKVDSKMLGRRVA------------------------------------ 87

Query: 123 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA---------PLDKVCILSCGV 173
             +    +G          +F+E+TV+++  V  + P           P           
Sbjct: 88  YHTSLKRHG----------SFAEFTVLNTDRVMTL-PDNLSFERAAALPC---------- 126

Query: 174 STGLGA--TLNVAKPERGSSVAVFGLGAVG-----LAAAEGARIAGASRIIGVDRSSKRF 226
              L A          +   V + G GAV      +    G  +   S       +S   
Sbjct: 127 -PLLTAWQAFEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-------ASLSQ 178

Query: 227 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVA 286
             A K GV   +        + +              +   +  N  +    +     + 
Sbjct: 179 ALAAKRGV-RHLY--REPSQVTQ--------KYFAIFDAVNS-QNAAALVPSLKANGHII 226

Query: 287 VLVGVPSKD-AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMN-KQL------- 337
            +            T+ I      +      G      D      +    + L       
Sbjct: 227 CIQDRIPAPIDPAFTRTI------SYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQG 280

Query: 338 ELEKFITHRIPFSEINKAFEYMVKGEG 364
           ++E        F ++ +A ++  + + 
Sbjct: 281 KMEIAAPDIFRFEQMIEALDHSEQTKL 307

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 72.3 bits (178), Expect = 2e-14
 Identities = 61/370 (16%), Positives = 118/370 (31%), Gaps = 81/370 (21%)

Query: 16  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESV 72
            + +D  V  P   ++ ++ ++  +  +D+ +  S G+   +   P   G E  G V ++
Sbjct: 41  TLSRDCPVPLPGDGDLLVRNRFVGVNASDINY--SAGRYDPSVKPPFDIGFEGIGEVVAL 98

Query: 73  GEGVS-DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSING 131
           G   S    VG  V                                              
Sbjct: 99  GLSASARYTVGQAVA--------------------------------------------- 113

Query: 132 EPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS 191
                ++   +F+EYTVV +     + P    + + +L  G  T   +   +     G  
Sbjct: 114 -----YMAPGSFAEYTVVPASIATPV-PSVKPEYLTLLVSGT-TAYISLKELGGLSEGKK 166

Query: 192 VAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEV 250
           V V    G  G  A + ++ A    +IG   S ++    K  G    +N       +  V
Sbjct: 167 VLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSLGCDRPINYKTEP--VGTV 223

Query: 251 IAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG--------VPSKDAVFMTKP 302
           + +    GVD   E  G       A + +    G  +++G                 T P
Sbjct: 224 LKQEYPEGVDVVYESVGG-AMFDLAVDALATK-GRLIVIGFISGYQTPTGLSPVKAGTLP 281

Query: 303 INVLNER-TLKGTFFGNYKPRTD--LPSVVDMYMNKQL------ELEKFITHRIPFSEIN 353
             +L +  +++G F  +Y  +    +  +++M ++  L                    I 
Sbjct: 282 AKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIF 341

Query: 354 KAFEYMVKGE 363
           +A  YM  G+
Sbjct: 342 RAVNYMYMGK 351

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 70.7 bits (174), Expect = 1e-13
 Identities = 56/323 (17%), Positives = 102/323 (31%), Gaps = 86/323 (26%)

Query: 17  IIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGHEAAGVVESVGEG 75
           +  D+ V  P+  +V IK+    +   + Y            P   G + AGV+E+VG+ 
Sbjct: 46  LRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDN 105

Query: 76  VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVN 135
            S  + GD V                                                  
Sbjct: 106 ASAFKKGDRV--------------------FTSS-------------------------- 119

Query: 136 HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL---------NV--- 183
               +  ++EY +     V K+               +    GA +          +   
Sbjct: 120 --TISGGYAEYALAADHTVYKLPE------------KLDFKQGAAIGIPYFTAYRALIHS 165

Query: 184 AKPERGSSVAVFGLGA--VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 241
           A  + G SV V G  +  VGLAA + AR  G  +I+G   + +  +   + G  +  N  
Sbjct: 166 ACVKAGESVLVHG-ASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFNHR 223

Query: 242 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 300
           E +    + I +     G+D  +E   N  N+      +  G G  ++VG      +   
Sbjct: 224 EVN--YIDKIKKYVGEKGIDIIIEMLAN-VNLSKDLSLLSHG-GRVIVVGSRGTIEIN-- 277

Query: 301 KPINVLNER-TLKGTFFGNYKPR 322
            P + + +  ++ G    +    
Sbjct: 278 -PRDTMAKESSIIGVTLFSSTKE 299

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 68.0 bits (167), Expect = 5e-13
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 2/82 (2%)

Query: 6  AAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 63
               + G P  L   +   A P   E++++ K   +   D Y        P  P   G 
Sbjct: 4  RIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGT 63

Query: 64 EAAGVVESVGEGVSDLEVGDHV 85
          EAAG+V  VG GV  ++ GD V
Sbjct: 64 EAAGIVSKVGSGVKHIKAGDRV 85

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 67.6 bits (166), Expect = 7e-13
 Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 2/82 (2%)

Query: 6  AAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 63
                 G P  L   D E   P    V ++ K   L   D Y+       P  P   G 
Sbjct: 4  RIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGA 63

Query: 64 EAAGVVESVGEGVSDLEVGDHV 85
          E AGVVE+VG+ V+  +VGD V
Sbjct: 64 EGAGVVEAVGDEVTRFKVGDRV 85

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 67.6 bits (166), Expect = 9e-13
 Identities = 68/325 (20%), Positives = 104/325 (32%), Gaps = 84/325 (25%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL----FPRIF 61
           AAV  EA  P +++ +    P   +V ++I+ +     D       G+ P      P I 
Sbjct: 10  AAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKI--RAGEAPHAQQPLPAIL 67

Query: 62  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 121
           G + AG V +VG  V    VGD V        G                      GV   
Sbjct: 68  GMDLAGTVVAVGPEVDSFRVGDAV-------FGL-------------------TGGVGGL 101

Query: 122 DGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI-----------NPLAPLDKVCILS 170
            G                  T +++  V +  +A              PL  +       
Sbjct: 102 QG------------------THAQFAAVDARLLASKPAALTMRQASVLPLVFI------- 136

Query: 171 CGVSTGLGATLNVAKPERGSSVAVFGLGA--VGLAAAEGARIAGASRIIGVDRSSKRFEE 228
               T     ++ A+ + G +V + G G   VG  A + A   GA R+    R S   E 
Sbjct: 137 ----TAWEGLVDRAQVQDGQTVLIQG-GGGGVGHVAIQIALARGA-RVFATARGSDL-EY 189

Query: 229 AKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAV 287
            +  G T    + E +    +  AE T G G D   +  G    + ++F  V     V  
Sbjct: 190 VRDLGATPIDASREPE----DYAAEHTAGQGFDLVYDTLGG-PVLDASFSAVKRFGHVVS 244

Query: 288 LVGVPSKD-AVFMTKPINVLNERTL 311
            +G  +   A    K        TL
Sbjct: 245 CLGWGTHKLAPLSFKQATYSGVFTL 269

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 67.2 bits (165), Expect = 1e-12
 Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 6  AAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFG 62
            +  E G    +  +D  V      E+ IK KYT +   + YF   KG  P   P + G
Sbjct: 11 VILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYF--RKGIYPCEKPYVLG 68

Query: 63 HEAAGVVESVGEGVSDLEVGDHV 85
           EA+G V + G+GV++ EVGD V
Sbjct: 69 REASGTVVAKGKGVTNFEVGDQV 91

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 66.1 bits (162), Expect = 2e-12
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 7/86 (8%)

Query: 6  AAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYF----WESKGQTPLFPR 59
          AAV  + G P   + ++V+V  P   +VR++     +   D Y               P 
Sbjct: 4  AAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEP-PI 62

Query: 60 IFGHEAAGVVESVGEGVSDLEVGDHV 85
          + G EAA VVE VG GV+D  VG+ V
Sbjct: 63 VVGFEAAAVVEEVGPGVTDFTVGERV 88

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 65.4 bits (160), Expect = 6e-12
 Identities = 53/328 (16%), Positives = 101/328 (30%), Gaps = 78/328 (23%)

Query: 15  PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGE 74
            L+  ++    P   ++ +++K  S+   D     S        ++ G++AAG+V +VG 
Sbjct: 39  SLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAVGP 98

Query: 75  GVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPV 134
            V+    GD V                               G ++  G           
Sbjct: 99  DVTLFRPGDEVF----------------------------YAGSIIRPG----------- 119

Query: 135 NHFLGTSTFSEYTVVHSGCVAKI-----------NPLAPLDKVCILSCGVST---GLGAT 180
                  T +E+ +V    V +             PL  +           T        
Sbjct: 120 -------TNAEFHLVDERIVGRKPKTLDWAEAAALPLTSI-----------TAWEAFFDR 161

Query: 181 LNVAKPERGSSVAVFGLGA---VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 237
           L+V KP  G++ A+  +G    VG  A + AR      +I      +  E  K  G    
Sbjct: 162 LDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHV 221

Query: 238 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-A 296
           ++   H +P+   +A +  G        T    +     + +       ++    + D  
Sbjct: 222 ID---HSKPLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDPSAFDIM 278

Query: 297 VFMTKPINVLNERTLKGTFFGNYKPRTD 324
           +F  K +++ +E       FG       
Sbjct: 279 LFKRKAVSIHHELMFTRPMFGTPDMSEQ 306

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 65.0 bits (158), Expect = 7e-12
 Identities = 37/309 (11%), Positives = 75/309 (24%), Gaps = 106/309 (34%)

Query: 16  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYF---------------------------- 47
           L +  ++   P   EV I+I+ + L  +DL                              
Sbjct: 20  LSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEG 79

Query: 48  -WESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNM 106
              S           G+E AGVV   G   +   +    +                    
Sbjct: 80  AMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTV-------------------- 119

Query: 107 CDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKV 166
                                          +G + +S+Y  + +     +         
Sbjct: 120 -----------------------------AAIGGAMYSQYRCIPADQCLVLPE------- 143

Query: 167 CILSCGVSTGLGATLNV-----------AKPERGSSVAVFGL-GAVGLAAAEGARIAGAS 214
                G +   GA+  V            + E  S++        +G    +     G  
Sbjct: 144 -----GATPADGASSFVNPLTALGMVETMRLEGHSALVHTAAASNLGQMLNQICLKDGI- 197

Query: 215 RIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMI 273
           +++ + R  ++ +  K  G     N +       + + E     G   + + TG      
Sbjct: 198 KLVNIVRKQEQADLLKAQGAVHVCNAASPT--FMQDLTEALVSTGATIAFDATGGGKLGG 255

Query: 274 SAFECVHDG 282
               C+   
Sbjct: 256 QILTCMEAA 264

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 64.2 bits (157), Expect = 1e-11
 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 7/85 (8%)

Query: 6  AAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRI 60
          A V    G    L +    +  PQ  E++I++K   L   DL     +G     P  P +
Sbjct: 6  AVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLM--VRQGNIDNPPKTPLV 63

Query: 61 FGHEAAGVVESVGEGVSDLEVGDHV 85
           G E +G+VE++G+ V   E+GD V
Sbjct: 64 PGFECSGIVEALGDSVKGYEIGDRV 88

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 60.5 bits (147), Expect = 4e-10
 Identities = 49/250 (19%), Positives = 73/250 (29%), Gaps = 66/250 (26%)

Query: 16  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG 75
           L+ +    AP    EVRI ++   +   D     + G  P      G E AGVV   G G
Sbjct: 226 LVDEPTATAPLGDGEVRIAMRAAGVNFRDALI--ALGMYPG-VASLGSEGAGVVVETGPG 282

Query: 76  VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVN 135
           V+ L  GD V+ +                                               
Sbjct: 283 VTGLAPGDRVMGMIPK-------------------------------------------- 298

Query: 136 HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAV- 194
                  F    V     V +I       +   +     T   A +++A    G S+ V 
Sbjct: 299 ------AFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVH 352

Query: 195 FGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD---FVNTSEHDRPIQEVI 251
              G VG+AA + AR  GA  +       K     +   ++        S      ++  
Sbjct: 353 SAAGGVGMAAIQLARHLGA-EVYATASEDKW----QAVELSREHLA---SSRTCDFEQQF 404

Query: 252 AEMTNG-GVD 260
              T G GVD
Sbjct: 405 LGATGGRGVD 414

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 58.8 bits (143), Expect = 8e-10
 Identities = 64/384 (16%), Positives = 111/384 (28%), Gaps = 103/384 (26%)

Query: 11  EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVE 70
             G      ++++  P+  E+ +KI+  S+   D    +        PR+ G +A GVVE
Sbjct: 15  SDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVD--TKQRLMDVSKAPRVLGFDAIGVVE 72

Query: 71  SVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSIN 130
           SVG  V+    GD V                               G    +G       
Sbjct: 73  SVGNEVTMFNQGDIVY----------------------------YSGSPDQNG------- 97

Query: 131 GEPVNHFLGTSTFSEYTVVHSGCVAKI--N---------PLAPLDKVCILSCGVST---G 176
                      + +EY +++   VAK   N         PL  +           T    
Sbjct: 98  -----------SNAEYQLINERLVAKAPKNISAEQAVSLPLTGI-----------TAYET 135

Query: 177 LGATLNVAKPER---GSSVAVFGLGA--VG-----LAAAEGAR-IAGASRIIGVDRSSKR 225
           L     +++      G ++ +   GA  VG     +A A G R I  ASR       ++ 
Sbjct: 136 LFDVFGISRNRNENEGKTLLIIN-GAGGVGSIATQIAKAYGLRVITTASR-------NET 187

Query: 226 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 285
            E  KK G    +N   H   +           VD                + V     +
Sbjct: 188 IEWTKKMGADIVLN---HKESLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHI 244

Query: 286 AVLVGVPSKDAV--FMTKPINVLNERTLKGTFFGNYKPRTD---LPSVVDMYMNKQLE-- 338
           A +V   +   +     K ++  +E                   L  + +       +  
Sbjct: 245 ATIVAFENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQPT 304

Query: 339 LEKFITHRIPFSEINKAFEYMVKG 362
             K +   +    I +A + +   
Sbjct: 305 TTK-VIEGLTTENIYQAHQILESN 327

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 58.4 bits (142), Expect = 9e-10
 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 7/80 (8%)

Query: 11  EAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPRIFGHEA 65
             G P  ++I    +      EV ++ +   + R D+   + +G  P       I G E 
Sbjct: 36  SFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDI--AQRQGSYPPPKDASPILGLEL 93

Query: 66  AGVVESVGEGVSDLEVGDHV 85
           +G +  VG GVS   VGD V
Sbjct: 94  SGEIVGVGPGVSGYAVGDKV 113

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 57.4 bits (139), Expect = 2e-09
 Identities = 65/405 (16%), Positives = 105/405 (25%), Gaps = 112/405 (27%)

Query: 6   AAVAWEAGKP---LIIQDVEV-APPQAMEVRIKIKYTSLCRTDLY--------------- 46
           A V  + GK       Q++ +       EV +K+   S+   D+                
Sbjct: 24  AWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRD 83

Query: 47  FWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNM 106
               K +   FP   G + +GVV   G  V   + GD V                     
Sbjct: 84  PLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVW-------------------- 123

Query: 107 CDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI--N------ 158
                                   G          T SE+ VV    V+    +      
Sbjct: 124 ----------------AAVPPWKQG----------TLSEFVVVSGNEVSHKPKSLTHTQA 157

Query: 159 ---PLAPLDKVCILSCGVSTGLGATLNVAK----PERGSSVAVFG-LGAVGLAAAEGARI 210
              P   L           T   A   V         G  V + G  G VG  A +  + 
Sbjct: 158 ASLPYVAL-----------TAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKA 206

Query: 211 AGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 270
             A  +  V  S    E  +K G  D ++       ++E +  +     D  ++  G   
Sbjct: 207 WDA-HVTAVC-SQDASELVRKLGADDVIDYKSGS--VEEQLKSL--KPFDFILDNVGG-S 259

Query: 271 NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVD 330
               A + +    G   +  V           I     +T         K          
Sbjct: 260 TETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRW 319

Query: 331 MYMN---KQLE----------LEKFITHRIPFSEINKAFEYMVKG 362
            +       L+          +   I    PFS++ +AF  + +G
Sbjct: 320 AFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERG 364

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 54.6 bits (132), Expect = 2e-08
 Identities = 57/275 (20%), Positives = 88/275 (32%), Gaps = 86/275 (31%)

Query: 6   AAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPRI 60
           A    + G P  L +++V    P   EV +K+  ++L R DL   + +GQ         I
Sbjct: 25  AVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADL--MQRQGQYDPPPGASNI 82

Query: 61  FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 120
            G EA+G V  +G G                                             
Sbjct: 83  LGLEASGHVAELGPGC-------------------------------------------- 98

Query: 121 ADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS------ 174
              Q  + I G+     L     ++Y  V  G +  I              G++      
Sbjct: 99  ---QGHWKI-GDTAMALLPGGGQAQYVTVPEGLLMPIPE------------GLTLTQAAA 142

Query: 175 ---TGLGATLNV---AKPERGSSVAVFGLGA--VGLAAAEGARIAGASRIIGVDRSSKRF 226
                L A   +      + G  V +   G   VG AA +  R+AGA   +    S K+ 
Sbjct: 143 IPEAWLTAFQLLHLVGNVQAGDYVLIHA-GLSGVGTAAIQLTRMAGA-IPLVTAGSQKKL 200

Query: 227 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD 260
           + A+K G     N  + D    E   + T G GV+
Sbjct: 201 QMAEKLGAAAGFNYKKED--FSEATLKFTKGAGVN 233

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 52.1 bits (126), Expect = 7e-08
 Identities = 43/258 (16%), Positives = 66/258 (25%), Gaps = 72/258 (27%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGHE 64
           A V    G PL + D+     +  EV ++++   L   D         T L  P I G E
Sbjct: 3   AWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGME 62

Query: 65  AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQ 124
             GVV            G                                          
Sbjct: 63  VVGVV-----------EGRRY-------AA------------------------------ 74

Query: 125 SRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA 184
                        +     +E   V  G +  +      ++         T   A L  A
Sbjct: 75  ------------LVPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLA-LKRA 121

Query: 185 KPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 243
           +   G  V V    GA+G AA + AR  G  R++      ++       G  +    +E 
Sbjct: 122 QARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATYAEV 180

Query: 244 DRPIQEVIAEMTNG-GVD 260
                          G+D
Sbjct: 181 PE-------RAKAWGGLD 191

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.3 bits (114), Expect = 3e-06
 Identities = 59/390 (15%), Positives = 111/390 (28%), Gaps = 101/390 (25%)

Query: 20  DVEVAPPQAMEV-RIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESV--GEGV 76
           D +V       V R++  Y  L R  L   E +        +      G  ++    +  
Sbjct: 122 DNQVFAK--YNVSRLQ-PYLKL-RQALL--ELRPA----KNVLIDGVLGSGKTWVALDVC 171

Query: 77  SDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVN 135
              +V   +   +F     +C    + +  +  LL          +D  S   +    + 
Sbjct: 172 LSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQ 231

Query: 136 HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI--------LSCGVSTGLGATLNVAKPE 187
             L           +         L  L  V          LSC +   L  T       
Sbjct: 232 AEL-RRLLKSKPYENC--------LLVLLNVQNAKAWNAFNLSCKI---LLTT------- 272

Query: 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-TDFVNTSEHDRP 246
           R   V  F      L+AA    I+       +D  S      +   +   +++    D P
Sbjct: 273 RFKQVTDF------LSAATTTHIS-------LDHHSMTLTPDEVKSLLLKYLDCRPQDLP 319

Query: 247 IQE---------VIAEMTNGGVDRS-----VECTGNIDNMISAF----------ECVHDG 282
            +          +IAE    G+        V C   +  +I +           +     
Sbjct: 320 REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD-KLTTIIESSLNVLEPAEYRKMFDR- 377

Query: 283 WGVAVL---VGVPSKDAVFM--------TKPINVLNERTLKGTFFGNYKPRTDLPSVVDM 331
             ++V      +P+   +          +  + V+N+           K  T   S+  +
Sbjct: 378 --LSVFPPSAHIPTI--LLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKEST--ISIPSI 431

Query: 332 YMNKQLELEKFIT-HR--IPFSEINKAFEY 358
           Y+  +++LE     HR  +    I K F+ 
Sbjct: 432 YLELKVKLENEYALHRSIVDHYNIPKTFDS 461

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	373
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.88
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	99.16
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.91
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.69
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.67
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.46
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.45
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.4
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.36
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	98.14
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.1
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.09
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.04
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.04
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	98.03
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	97.99
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.91
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.83
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.82
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.82
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.73
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.71
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.69
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.68
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.66
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.65
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.64
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	97.63
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.52
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.51
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.38
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.33
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.29
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.22
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.2
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.19
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	97.16
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.15
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	97.1
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.08
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.06
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	97.06
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.05
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.05
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.03
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.02
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.02
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.01
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.01
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.0
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	97.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.0
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	97.0
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	96.98
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	96.95
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.94
1xhl_A	297	Short-chain dehydrogenase/reductase family member	96.93
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.92
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	96.91
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.91
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	96.91
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	96.9
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	96.9
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	96.9
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.89
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	96.89
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.87
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.87
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.87
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	96.84
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.84
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	96.83
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	96.83
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.83
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	96.82
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	96.82
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	96.82
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	96.82
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	96.81
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	96.81
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.81
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.81
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.81
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.8
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.8
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.8
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	96.79
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.79
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.78
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.78
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.78
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	96.77
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.77
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.77
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.76
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.76
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	96.75
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.74
1spx_A	278	Short-chain reductase family member (5L265); paral	96.73
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.72
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	96.72
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.72
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.7
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	96.68
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.68
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	96.68
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.68
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.68
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	96.68
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.67
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.67
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.66
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.64
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.64
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	96.64
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.64
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	96.63
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	96.63
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.62
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.62
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.61
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.61
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.6
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.59
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.59
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.59
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.58
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	96.58
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.58
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.58
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.58
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.58
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.58
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	96.57
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	96.57
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.57
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.56
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.56
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.56
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	96.56
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.56
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.56
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.55
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.55
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.54
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.53
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.53
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.53
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.53
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.52
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.52
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.52
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	96.51
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	96.51
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.5
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.5
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.5
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.5
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.5
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.5
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	96.49
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	96.49
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.49
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.47
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	96.47
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	96.47
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	96.47
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	96.47
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.47
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.47
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.46
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	96.46
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.46
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	96.45
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.45
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.45
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	96.44
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.44
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	96.43
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	96.43
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.42
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.42
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	96.41
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.41
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.41
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.4
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.4
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.4
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	96.39
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.39
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	96.36
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.36
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.36
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.36
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.36
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	96.35
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	96.34
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	96.34
1xq1_A	266	Putative tropinone reducatse; structural genomics,	96.33
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.33
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	96.32
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.32
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.31
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	96.31
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.31
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.31
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	96.3
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.29
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.29
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.29
1id1_A	153	Putative potassium channel protein; RCK domain, E.	96.29
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.29
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.28
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.28
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	96.28
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.28
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	96.28
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	96.27
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	96.27
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	96.27
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	96.27
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.26
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.26
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.26
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	96.25
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	96.25
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.25
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	96.24
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.23
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	96.23
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	96.22
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.22
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	96.22
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	96.22
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	96.21
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	96.21
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.21
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	96.21
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	96.2
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.19
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.19
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.19
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	96.18
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	96.18
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	96.17
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	96.17
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.17
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	96.17
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	96.15
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	96.15
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	96.15
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.14
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.14
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.13
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	96.13
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	96.13
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	96.13
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	96.12
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	96.12
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	96.09
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.09
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.09
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.08
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	96.07
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	96.07
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	96.07
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	96.06
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	96.06
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	96.06
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.05
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.04
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.04
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	96.04
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.04
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.03
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	96.03
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	96.02
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	96.01
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	96.01
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.01
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	96.0
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	96.0
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	96.0
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	95.99
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.99
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	95.98
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	95.96
4had_A	350	Probable oxidoreductase protein; structural genomi	95.96
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	95.94
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	95.92
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	95.92
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	95.92
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	95.91
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	95.91
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.9
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	95.89
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	95.89
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	95.89
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.89
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	95.88
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	95.88
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	95.88
1xq6_A	253	Unknown protein; structural genomics, protein stru	95.88
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.87
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	95.87
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	95.86
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	95.86
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.86
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	95.86
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	95.85
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	95.83
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	95.8
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	95.8
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	95.8
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	95.79
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	95.78
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	95.77
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	95.76
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	95.76
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	95.75
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.75
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.74
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.74
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	95.73
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	95.73
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.72
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	95.72
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	95.71
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	95.71
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	95.71
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	95.7
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	95.7
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	95.7
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	95.7
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	95.69
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	95.69
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	95.67
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	95.67
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	95.67
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	95.66
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	95.66
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	95.64
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	95.63
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	95.63
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	95.61
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	95.6
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	95.6
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	95.6
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	95.58
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	95.58
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.58
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	95.56
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	95.56
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	95.55
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	95.55
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	95.54
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	95.54
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	95.54
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	95.53
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	95.52
2o07_A	304	Spermidine synthase; structural genomics, structur	95.52
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	95.5
2i7c_A	283	Spermidine synthase; transferase, structural genom	95.5
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	95.5
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.5
3g07_A	292	7SK snRNA methylphosphate capping enzyme; structur	95.5
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	95.49
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	95.48
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.48
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	95.47
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.47
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	95.47
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	95.45
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	95.45
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	95.45
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	95.45
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	95.44
1zej_A	293	HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural	95.44
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	95.43
4gqa_A	412	NAD binding oxidoreductase; structural genomics, P	95.41
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.41
3u3x_A	361	Oxidoreductase; structural genomics, PSI-biology,	95.4
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	95.39
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	95.39
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	95.36
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	95.35
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	95.35
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	95.35
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	95.35
1zh8_A	340	Oxidoreductase; TM0312, structural genomics, JO ce	95.34
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.32
3e82_A	364	Putative oxidoreductase; NAD, GFO/IDH/MOCA family,	95.32
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	95.32
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	95.29
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	95.29
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	95.28
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	95.28
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	95.27
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	95.26
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	95.25
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	95.24
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	95.24
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.24
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	95.22
3m4x_A	456	NOL1/NOP2/SUN family protein; mtase domain, PUA do	95.22
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	95.22
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	95.21
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	95.2
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	95.2
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	95.2
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	95.19
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	95.19
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	95.18
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	95.18
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	95.18
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	95.17
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	95.16
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.15
1inl_A	296	Spermidine synthase; beta-barrel, rossman fold, st	95.15
2pt6_A	321	Spermidine synthase; transferase, structural genom	95.15
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	95.15
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	95.14
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	95.12
3f4k_A	257	Putative methyltransferase; structural genomics, P	95.09
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	95.07
1ixk_A	315	Methyltransferase; open beta sheet; 1.90A {Pyrococ	95.07
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	95.06
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	95.05
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	95.05
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	95.05

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=2.5e-65  Score=483.91  Aligned_cols=373  Identities=56%  Similarity=1.006  Sum_probs=335.1

Q ss_pred             CcccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 017336            1 MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         1 m~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      +++|||+++.++++++++++++.|+|+++||||||+++|||++|++.+.|..+...+|.++|||++|+|+++|++|+.|+
T Consensus         6 ~~tmkA~v~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~   85 (378)
T 3uko_A            6 VITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ   85 (378)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             ceeeEEEEEecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCCCCCCccCCccceEEEEEeCCCCCcCC
Confidence            35699999999998899999999999999999999999999999999999877778899999999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||||++.+..+|+.|++|++|++|.|++.......|+...+|..++..+|....++.+.|+|+||+.++++.++++|++
T Consensus        86 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~  165 (378)
T 3uko_A           86 AGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPT  165 (378)
T ss_dssp             TTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTT
T ss_pred             CCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhheEECCCC
Confidence            99999999999999999999999999998766544566666777777778877777778899999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      +++++||.+++++.|||+++.+.++++++++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++.++++
T Consensus       166 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~  245 (378)
T 3uko_A          166 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNP  245 (378)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECG
T ss_pred             CCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEcc
Confidence            99999999999999999998888999999999999999999999999999999789999999999999999999999998


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCC
Q 017336          241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK  320 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  320 (373)
                      .+.+.++.+.+++.+++++|+||||+|++..++.+++++++++|+++.+|.......+.+....+.+++++.|+.++.+.
T Consensus       246 ~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  325 (378)
T 3uko_A          246 KDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFK  325 (378)
T ss_dssp             GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             ccCchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhcCcEEEEEEecCCC
Confidence            74333489999999988999999999998899999999999329999999876555566665555568899998776555


Q ss_pred             CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEecCC
Q 017336          321 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED  373 (373)
Q Consensus       321 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~~~  373 (373)
                      ..+++.++++++.++++++.++++++|+|+++++|++.+.+++..|++|++++
T Consensus       326 ~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~Kvvi~~~~  378 (378)
T 3uko_A          326 SRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCLRCVLDTSK  378 (378)
T ss_dssp             HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCSEEEEETTC
T ss_pred             chHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCceEEEEecCC
Confidence            55678999999999999998899999999999999999998887899999874

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=6.2e-61  Score=453.18  Aligned_cols=365  Identities=44%  Similarity=0.789  Sum_probs=306.0

Q ss_pred             CcccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 017336            1 MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         1 m~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |++|||+++.+++++++++++|.|+|+++||||||.+++||++|++.+.|.++ ..+|.++|||++|+|+++|++|++|+
T Consensus         7 p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~v~~~~   85 (373)
T 1p0f_A            7 DITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIGAGVTCVK   85 (373)
T ss_dssp             CEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             cceeEEEEEEcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC-CCCCcccCcCceEEEEEECCCCCccC
Confidence            45799999999887799999999999999999999999999999999988665 56899999999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||||++.+..+|+.|.+|++|++|.|++.......|.. .++...+..+|....+....|+|+||++++++.++++|++
T Consensus        86 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~  164 (373)
T 1p0f_A           86 PGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLM-ADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPK  164 (373)
T ss_dssp             TTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTT
T ss_pred             CCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccc-cCCccccccCCcccccccCCccceeEEEEchhhEEECCCC
Confidence            999999999999999999999999999875432111221 1111111112211122223579999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      ++++ ||++++++.|||+++.+.++++++++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++++
T Consensus       165 l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~  243 (373)
T 1p0f_A          165 APLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNP  243 (373)
T ss_dssp             CCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred             CChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEec
Confidence            9999 999999999999988788999999999999999999999999999999789999999999999999999999987


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCC-cEEEEEcCCCCCceeeccchhh-cccceEEEEeccC
Q 017336          241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW-GVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGN  318 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~  318 (373)
                      .+.+.++.+.+++.+++++|+|||++|+++.++.+++++++ + |+++.+|.........+....+ .++ ++.|+.++.
T Consensus       244 ~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~  321 (373)
T 1p0f_A          244 KDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYC-GSGVTVVLGLASPNERLPLDPLLLLTGR-SLKGSVFGG  321 (373)
T ss_dssp             GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECCCCCTTCCEEECTHHHHTTC-EEEECSGGG
T ss_pred             ccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhc-CCCEEEEEccCCCCCccccCHHHhccCc-eEEeeccCC
Confidence            64222388889888877999999999997889999999999 6 9999999765433344444434 366 898886544


Q ss_pred             CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336          319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  371 (373)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~  371 (373)
                      +.. ++++++++++.++++++.++++++|+|+++++|++.+.+++..|++|++
T Consensus       322 ~~~-~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~  373 (373)
T 1p0f_A          322 FKG-EEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQGVRSIMIY  373 (373)
T ss_dssp             CCG-GGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSCSEEEEEC
T ss_pred             cCH-HHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCcceEEEeC
Confidence            322 5799999999999998888899999999999999999888777999875

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=5.5e-61  Score=453.69  Aligned_cols=367  Identities=47%  Similarity=0.850  Sum_probs=307.3

Q ss_pred             CcccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 017336            1 MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         1 m~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |++|||+++.++++++++++++.|+|+++||+|||.+++||++|++++.|.++.. +|.++|||++|+|+++|++|++|+
T Consensus         6 ~~~mkA~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~P~v~GhE~~G~V~~vG~~v~~~~   84 (374)
T 2jhf_A            6 VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP-LPVIAGHEAAGIVESIGEGVTTVR   84 (374)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCCC-SSBCCCCSEEEEEEEECTTCCSCC
T ss_pred             ceeEEEEEEecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCCC-CCcccCcCceEEEEEECCCCCCCC
Confidence            5679999999998779999999999999999999999999999999998865543 899999999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||||++.+..+|+.|.+|++|++|.|++.......|+. .++...+..+|.+..+....|+|+||++++++.++++|++
T Consensus        85 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~  163 (374)
T 2jhf_A           85 PGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAA  163 (374)
T ss_dssp             TTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTT
T ss_pred             CCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccc-cCCcccccccccccccccCCccCeeEEEEchHHeEECCCC
Confidence            999999999999999999999999999875432111221 1111111112211122223479999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      +++++||++++++.|||+++.+.++++++++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++.++++
T Consensus       164 l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~  243 (374)
T 2jhf_A          164 SPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP  243 (374)
T ss_dssp             CCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred             CCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecc
Confidence            99999999999999999988788999999999999999999999999999999789999999999999999999999987


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCC-cEEEEEcCCCCCceeeccchhh-cccceEEEEeccC
Q 017336          241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW-GVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGN  318 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~  318 (373)
                      .+.+.++.+.+++.+++++|+|||++|++..+..+++++++ + |+++.+|.........++...+ .++ ++.|+.++.
T Consensus       244 ~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~  321 (374)
T 2jhf_A          244 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE-AYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKGAIFGG  321 (374)
T ss_dssp             GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCT-TTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSGGG
T ss_pred             cccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhc-CCcEEEEeccCCCCCccccCHHHHhcCC-eEEEeccCC
Confidence            64222388888888877999999999997889999999999 6 9999999765433344444433 366 899887654


Q ss_pred             CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336          319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  371 (373)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~  371 (373)
                      +...+++++++++++++++++.++++++|+|+++++|++.+.+++..|++|++
T Consensus       322 ~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvi~~  374 (374)
T 2jhf_A          322 FKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTILTF  374 (374)
T ss_dssp             CCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CChHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCcceEEEeC
Confidence            33345689999999999998888899999999999999999988877999875

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=4.9e-61  Score=454.00  Aligned_cols=367  Identities=51%  Similarity=0.903  Sum_probs=308.2

Q ss_pred             cccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 017336            2 SSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   81 (373)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   81 (373)
                      ++|||+++.++++++++++++.|+|+++||+|||.++|||++|++.+.|.++...+|.++|||++|+|+++|++|+.|++
T Consensus         5 ~~mkA~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~~v   84 (373)
T 2fzw_A            5 IKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLKA   84 (373)
T ss_dssp             EEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCSCCT
T ss_pred             cceEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCCCCCCccccccccEEEEEECCCCCCCCC
Confidence            57999999998877999999999999999999999999999999999887665678999999999999999999999999


Q ss_pred             CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336           82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  161 (373)
Q Consensus        82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~  161 (373)
                      ||||++.+..+|+.|.+|++|++|.|++.......|+. .+|...+..+|.+..++.+.|+|+||++++++.++++|+++
T Consensus        85 GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l  163 (373)
T 2fzw_A           85 GDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLA  163 (373)
T ss_dssp             TCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCC-TTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTS
T ss_pred             CCEEEECCCCCCCCChHHcCcCcccCCCcccccccccc-cCCcccccccccccccccCCccceeEEEEchhheEECCCCC
Confidence            99999999999999999999999999875321000211 11211122222222222345799999999999999999999


Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  241 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~  241 (373)
                      ++++||++++++.|||+++.+.++++++++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++.++++.
T Consensus       164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~  243 (373)
T 2fzw_A          164 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ  243 (373)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccc
Confidence            99999999999999999887889999999999999999999999999999997899999999999999999999999876


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCC-cEEEEEcCCCCCceeeccchhhc-ccceEEEEeccCC
Q 017336          242 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW-GVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNY  319 (373)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~  319 (373)
                      +.+.++.+.+++.+++++|+|||++|++..++.+++++++ + |+++.+|.......+.+....+. ++ ++.|+.++.+
T Consensus       244 ~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~~  321 (373)
T 2fzw_A          244 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHK-GWGVSVVVGVAASGEEIATRPFQLVTGR-TWKGTAFGGW  321 (373)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSGGGC
T ss_pred             cccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhcc-CCcEEEEEecCCCCceeeeCHHHHhcCC-EEEEeccCCC
Confidence            4222388888888877999999999997889999999999 6 99999997653333444444333 66 8998865543


Q ss_pred             CCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336          320 KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  371 (373)
Q Consensus       320 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~  371 (373)
                      ...+++++++++++++++++.++++++|+|+++++|++.+.+++..|++|++
T Consensus       322 ~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~  373 (373)
T 2fzw_A          322 KSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  373 (373)
T ss_dssp             CHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCcceEEEeC
Confidence            3345689999999999998888899999999999999999988878999874

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1e-60  Score=451.83  Aligned_cols=366  Identities=50%  Similarity=0.869  Sum_probs=306.4

Q ss_pred             CcccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccc-ccccCCCCCCCCccccccceEEEEEeCCCCCCC
Q 017336            1 MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLY-FWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL   79 (373)
Q Consensus         1 m~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~-~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~   79 (373)
                      |++|||+++.+++++++++++|.|+|+++||+|||.+++||++|++ .+.|.++ ..+|.++|||++|+|+++|++|+.|
T Consensus         6 ~~~mka~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~V~~~   84 (374)
T 1cdo_A            6 VIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK-DGFPVVLGHEGAGIVESVGPGVTEF   84 (374)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT-TSCSEECCCCEEEEEEEECTTCCSC
T ss_pred             cceeEEEEEecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC-CCCCcccCccceEEEEEECCCCccC
Confidence            4679999999988789999999999999999999999999999999 8888655 5679999999999999999999999


Q ss_pred             CCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC
Q 017336           80 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP  159 (373)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~  159 (373)
                      ++||||++.+..+|+.|.+|++|++|.|++.......|+. .+|...+..+|....+....|+|+||++++++.++++|+
T Consensus        85 ~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~  163 (374)
T 1cdo_A           85 QPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM-SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDP  163 (374)
T ss_dssp             CTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTT-SCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCT
T ss_pred             CCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccc-cCCccccccCCcccccccCCccceeEEEEchhheEECCC
Confidence            9999999999999999999999999999875432111221 112111111221111222347999999999999999999


Q ss_pred             CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      ++++++||++++++.|||+++.+.++++++++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++.+++
T Consensus       164 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~  243 (374)
T 1cdo_A          164 SAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVN  243 (374)
T ss_dssp             TCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEEC
T ss_pred             CCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEe
Confidence            99999999999999999998878899999999999999999999999999999978999999999999999999999998


Q ss_pred             CCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCC-cEEEEEcCCCCCceeeccchhhc-ccceEEEEecc
Q 017336          240 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW-GVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFG  317 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~  317 (373)
                      +.+.+.++.+.+++.+++++|+|||++|++..+..+++++++ + |+++.+|.... ..+.++...+. ++ ++.|+.++
T Consensus       244 ~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~-~~~~~~~~~~~~~~-~i~g~~~~  320 (374)
T 1cdo_A          244 PNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLK-GWGVSVLVGWTDL-HDVATRPIQLIAGR-TWKGSMFG  320 (374)
T ss_dssp             GGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCSS-SCEEECHHHHHTTC-EEEECSGG
T ss_pred             ccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhc-CCcEEEEEcCCCC-CCcccCHHHHhcCC-eEEEEecC
Confidence            764222388888888877999999999987889999999999 6 99999998653 23334433333 66 88888655


Q ss_pred             CCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336          318 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  371 (373)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~  371 (373)
                      .+...++++++++++.++++++.++++++|+|+++++|++.+.+++..|++|++
T Consensus       321 ~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~  374 (374)
T 1cdo_A          321 GFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  374 (374)
T ss_dssp             GCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCcHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCeeEEEEeC
Confidence            433345689999999999998888899999999999999999988878999875

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=1.5e-60  Score=451.02  Aligned_cols=365  Identities=42%  Similarity=0.807  Sum_probs=304.4

Q ss_pred             CcccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 017336            1 MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         1 m~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      +++|||+++.+++.++++++++.|+|+++||+|||.+++||++|++.+.|. +...+|.++|||++|+|+++|++|+.|+
T Consensus         6 p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~~~~P~v~GhE~~G~V~~vG~~v~~~~   84 (376)
T 1e3i_A            6 VIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKALFPVVLGHECAGIVESVGPGVTNFK   84 (376)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-SCCCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             ChheeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-CCCCCCcccCccccEEEEEECCCCccCC
Confidence            457999999998877999999999999999999999999999999998886 4456899999999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCcccc----ccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEe
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLR----INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK  156 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~----~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~  156 (373)
                      +||||++.+..+|+.|++|++|++|.|++..    .....|+. .+|...+..+|....++...|+|+||++++++.+++
T Consensus        85 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~  163 (376)
T 1e3i_A           85 PGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELM-EDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLAR  163 (376)
T ss_dssp             TTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSC-TTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEE
T ss_pred             CCCEEEECCcCCCCCCccccCCCcccCcCcCcccccccccccc-ccCccccccCCcccccccCCccceeEEEeccccEEE
Confidence            9999999999999999999999999998754    10001221 111111111111111122347999999999999999


Q ss_pred             CCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce
Q 017336          157 INPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  236 (373)
Q Consensus       157 ~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~  236 (373)
                      +|+++++++||++++++.|||+++.+.++++++++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++.
T Consensus       164 iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~  243 (376)
T 1e3i_A          164 VDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATD  243 (376)
T ss_dssp             CCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSE
T ss_pred             CCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcE
Confidence            99999999999999999999998888899999999999999999999999999999978999999999999999999999


Q ss_pred             eecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCC-cEEEEEcCCCCCceeeccchhhc-ccceEEEE
Q 017336          237 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW-GVAVLVGVPSKDAVFMTKPINVL-NERTLKGT  314 (373)
Q Consensus       237 vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~  314 (373)
                      ++++.+.+.++.+.+++.+++++|+|||++|++..++.+++++++ + |+++.+|...  ....++...+. ++ ++.|+
T Consensus       244 vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~-~~G~iv~~G~~~--~~~~~~~~~~~~~~-~i~g~  319 (376)
T 1e3i_A          244 CLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVL-GWGSCTVVGAKV--DEMTIPTVDVILGR-SINGT  319 (376)
T ss_dssp             EECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCT-TTCEEEECCCSS--SEEEEEHHHHHTTC-EEEEC
T ss_pred             EEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhc-CCCEEEEECCCC--CccccCHHHhhccC-eEEEE
Confidence            998764222388888888877999999999987889999999999 6 9999999842  23344444333 66 89888


Q ss_pred             eccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336          315 FFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  371 (373)
Q Consensus       315 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~  371 (373)
                      .++.+...+++.++++++.++++++.++++++|+|+++++|++.+.+++..|++|++
T Consensus       320 ~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvi~~  376 (376)
T 1e3i_A          320 FFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKSIRTILTF  376 (376)
T ss_dssp             SGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             ecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCCcceEEEeC
Confidence            654433345689999999999998888899999999999999999988877999875

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.1e-60  Score=451.27  Aligned_cols=364  Identities=30%  Similarity=0.529  Sum_probs=304.2

Q ss_pred             CcccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 017336            1 MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         1 m~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |++|||+++.+++++++++++|.|+|+++||+|||.++|||++|++.+.|.++ ..+|.++|||++|+|+++|++|+.|+
T Consensus         4 ~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~v~~~~   82 (371)
T 1f8f_A            4 LKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTELQ   82 (371)
T ss_dssp             CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             cccceEEEEcCCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC-CCCCcccCcccceEEEEeCCCCCCCC
Confidence            45699999999887799999999999999999999999999999999988654 45799999999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccc-cCCCcc-ccccCCcceeeEEEEecCceEeCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFS-INGEPV-NHFLGTSTFSEYTVVHSGCVAKIN  158 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~-~~g~~~-~~~~~~G~~a~~~~v~~~~~~~~p  158 (373)
                      +||||++.+ .+|+.|++|++|+++.|++.......|.. .+|..++. .+|... .+....|+|+||++++++.++++|
T Consensus        83 ~GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP  160 (371)
T 1f8f_A           83 VGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGAD-SEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVT  160 (371)
T ss_dssp             TTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSC-SSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEEC
T ss_pred             CCCEEEecC-CCCCCChhhhCcCcccccccccccccccc-ccccccccccCCccccccccCCccccCeEEechhheEECC
Confidence            999999999 99999999999999999875422111100 11111110 011000 011234799999999999999999


Q ss_pred             CCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee
Q 017336          159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  238 (373)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi  238 (373)
                      +++++++||++++++.|||+++.+.++++++++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|++.++
T Consensus       161 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi  240 (371)
T 1f8f_A          161 KDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVI  240 (371)
T ss_dssp             TTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEE
T ss_pred             CCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEe
Confidence            99999999999999999999987889999999999999999999999999999997799999999999999999999999


Q ss_pred             cCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEecc
Q 017336          239 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG  317 (373)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~  317 (373)
                      ++.+.+  +.+.+++.+++++|+|||++|.+..++.++++|+++ |+++.+|.........++...+ .+++++.|+..+
T Consensus       241 ~~~~~~--~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~  317 (371)
T 1f8f_A          241 NSKTQD--PVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEG  317 (371)
T ss_dssp             ETTTSC--HHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGG
T ss_pred             cCCccC--HHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCCC
Confidence            987665  888888888779999999999878899999999997 9999999865332333443333 489999998765


Q ss_pred             CCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336          318 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  371 (373)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~  371 (373)
                      .....++++++++++.++++++.+++++ |+|+++++|++.+.+++..|++|++
T Consensus       318 ~~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~~Kvvv~~  370 (371)
T 1f8f_A          318 SGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGITLKPIIKI  370 (371)
T ss_dssp             GSCHHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred             CCchHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCceEEEEee
Confidence            4333356899999999999988778888 9999999999999888878999986

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=1.4e-59  Score=442.96  Aligned_cols=339  Identities=25%  Similarity=0.402  Sum_probs=300.2

Q ss_pred             CcccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 017336            1 MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         1 m~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |++|||+++.+++. ++++++|.|+|+++||+|||.+++||++|++.+.|.+ ...+|.++|||++|+|+++|++++.|+
T Consensus        21 p~~mkA~v~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~-~~~~p~v~G~e~~G~V~~vG~~v~~~~   98 (370)
T 4ej6_A           21 QSMMKAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEF-PSTPPVTLGHEFCGIVVEAGSAVRDIA   98 (370)
T ss_dssp             CCEEEEEEEEETTE-EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSS-CCCSSEECCCSEEEEEEEECTTCCSSC
T ss_pred             chheEEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCC-CCCCCeecCcceEEEEEEECCCCCCCC
Confidence            45699999998865 9999999999999999999999999999999998865 456799999999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||||++.+..+|+.|.+|++|+++.|++....   |+.                   ..|+|+||++++++.++++|++
T Consensus        99 vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~~P~~  156 (370)
T 4ej6_A           99 PGARITGDPNISCGRCPQCQAGRVNLCRNLRAI---GIH-------------------RDGGFAEYVLVPRKQAFEIPLT  156 (370)
T ss_dssp             TTCEEEECCEECCSSSHHHHTTCGGGCTTCEEB---TTT-------------------BCCSSBSEEEEEGGGEEEECTT
T ss_pred             CCCEEEECCCCCCCCChHHhCcCcccCCCcccc---CCC-------------------CCCcceEEEEEchhhEEECCCC
Confidence            999999999999999999999999999986644   322                   2469999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      +++++|| ++.++.|||+++ +.++++++++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++.++++
T Consensus       157 ~~~~~aa-l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~  234 (370)
T 4ej6_A          157 LDPVHGA-FCEPLACCLHGV-DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDP  234 (370)
T ss_dssp             SCTTGGG-GHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECT
T ss_pred             CCHHHHh-hhhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECC
Confidence            9999998 666899999986 78999999999999999999999999999999889999999999999999999999998


Q ss_pred             CCCCccHHHHHHH---HcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc-ccceEEEEec
Q 017336          241 SEHDRPIQEVIAE---MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFF  316 (373)
Q Consensus       241 ~~~~~~~~~~~~~---~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~  316 (373)
                      .+.+  +.+.+++   .+++++|+|||++|++..++.++++|+++ |+++.+|.........++...+. +++++.|+..
T Consensus       235 ~~~~--~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~-G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  311 (370)
T 4ej6_A          235 SAGD--VVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQGEKVEIEPFDILFRELRVLGSFI  311 (370)
T ss_dssp             TSSC--HHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCS
T ss_pred             CCcC--HHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEeccCCCCccccCHHHHHhCCcEEEEecc
Confidence            7766  8888888   77779999999999878999999999997 99999998765434455554444 9999999865


Q ss_pred             cCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc--eeEEEecC
Q 017336          317 GNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG--LRCIISME  372 (373)
Q Consensus       317 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~--~k~v~~~~  372 (373)
                      ..    ++++++++++.+|++.+.++++++|||+++++|++.+.+++.  .|++++++
T Consensus       312 ~~----~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~  365 (370)
T 4ej6_A          312 NP----FVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAE  365 (370)
T ss_dssp             CT----TCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC--
T ss_pred             Ch----HHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEccc
Confidence            32    469999999999999999999999999999999999987763  48887765

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=1e-58  Score=433.98  Aligned_cols=340  Identities=28%  Similarity=0.387  Sum_probs=284.2

Q ss_pred             CcccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccc-CCC--CCCCCccccccceEEEEEeCCCCC
Q 017336            1 MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWES-KGQ--TPLFPRIFGHEAAGVVESVGEGVS   77 (373)
Q Consensus         1 m~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g-~~~--~~~~p~i~G~e~~G~V~~vG~~v~   77 (373)
                      |++|||+++.+++..++++++|.|+|+++||+|||.+++||++|++.+.| .++  ...+|.++|||++|+|+++|++|+
T Consensus         2 m~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~   81 (348)
T 2d8a_A            2 SEKMVAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVE   81 (348)
T ss_dssp             -CEEEEEEECSSSSSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCC
T ss_pred             CCcceEEEEECCCCCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCC
Confidence            66799999999885699999999999999999999999999999999887 332  246799999999999999999999


Q ss_pred             CCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeC
Q 017336           78 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI  157 (373)
Q Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~  157 (373)
                      +|++||||++.+..+|+.|.+|++|++|.|++....   |..                   ..|+|+||++++++.++++
T Consensus        82 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~i  139 (348)
T 2d8a_A           82 GIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIF---GVD-------------------TDGVFAEYAVVPAQNIWKN  139 (348)
T ss_dssp             SCCTTCEEEECCEECCSCCC------------CEET---TTS-------------------SCCSSBSEEEEEGGGEEEC
T ss_pred             cCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCee---cCC-------------------CCCcCcceEEeChHHeEEC
Confidence            999999999999999999999999999999876543   321                   2369999999999999999


Q ss_pred             CCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee
Q 017336          158 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF  237 (373)
Q Consensus       158 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v  237 (373)
                      |+++++++||.++ ++.|||+++ +.+++ ++++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++.+
T Consensus       140 P~~~~~~~aa~~~-~~~ta~~~l-~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~  216 (348)
T 2d8a_A          140 PKSIPPEYATLQE-PLGNAVDTV-LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYV  216 (348)
T ss_dssp             CTTSCHHHHTTHH-HHHHHHHHH-TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEE
T ss_pred             CCCCCHHHHHhhh-HHHHHHHHH-HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEE
Confidence            9999999999885 788999987 67889 99999999999999999999999998679999999999999999999999


Q ss_pred             ecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-hhh-cccceEEEE
Q 017336          238 VNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INV-LNERTLKGT  314 (373)
Q Consensus       238 i~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~-~~~~~i~g~  314 (373)
                      +++++.+  +.+.+++.+++ ++|+|||++|.+..++.++++++++ |+++.+|.....  ..++. ..+ .+++++.|+
T Consensus       217 ~~~~~~~--~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~--~~~~~~~~~~~~~~~i~g~  291 (348)
T 2d8a_A          217 INPFEED--VVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGLYPGK--VTIDFNNLIIFKALTIYGI  291 (348)
T ss_dssp             ECTTTSC--HHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCSSC--CCCCHHHHTTTTTCEEEEC
T ss_pred             ECCCCcC--HHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCCC--cccCchHHHHhCCcEEEEe
Confidence            9887655  88889988887 8999999999988899999999997 999999986533  33333 333 488999987


Q ss_pred             eccCCCCCCCHHHHHHHHHcCCCCCCCceeeeec-cccHHHHHHHHHcCCceeEEEecC
Q 017336          315 FFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP-FSEINKAFEYMVKGEGLRCIISME  372 (373)
Q Consensus       315 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-l~~~~~a~~~l~~~~~~k~v~~~~  372 (373)
                      ....  ..++++++++++++|++++.++++++|+ |+++++|++.+.++..+|++++++
T Consensus       292 ~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~gKvvi~~~  348 (348)
T 2d8a_A          292 TGRH--LWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRAGKTGKVVFMLK  348 (348)
T ss_dssp             CCCC--SHHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHTTCCSEEEEEC-
T ss_pred             cCCC--cHHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhCCCceEEEEeeC
Confidence            5432  1346899999999999988888999999 999999999998755679999864

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=2.4e-58  Score=432.70  Aligned_cols=341  Identities=23%  Similarity=0.381  Sum_probs=293.8

Q ss_pred             CcccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCC-C--CCCCCccccccceEEEEEeCCCCC
Q 017336            1 MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-Q--TPLFPRIFGHEAAGVVESVGEGVS   77 (373)
Q Consensus         1 m~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-~--~~~~p~i~G~e~~G~V~~vG~~v~   77 (373)
                      |++|||+++.+++. +++++++.|+|+++||+|||.++|||++|++.+.+.. .  ...+|.++|||++|+|+++|++|+
T Consensus         5 ~~~mka~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~   83 (356)
T 1pl8_A            5 KPNNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVK   83 (356)
T ss_dssp             CCCCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCC
T ss_pred             ccCceEEEEecCCc-EEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCC
Confidence            67899999998765 9999999999999999999999999999999887432 1  135799999999999999999999


Q ss_pred             CCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeC
Q 017336           78 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI  157 (373)
Q Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~  157 (373)
                      +|++||||++.+..+|+.|.+|++|+++.|++..+.   |...                  ..|+|+||++++++.++++
T Consensus        84 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~~------------------~~G~~aey~~v~~~~~~~i  142 (356)
T 1pl8_A           84 HLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFC---ATPP------------------DDGNLCRFYKHNAAFCYKL  142 (356)
T ss_dssp             SCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEET---TBTT------------------BCCSCBSEEEEEGGGEEEC
T ss_pred             CCCCCCEEEEeccCCCCCChHHHCcCcccCCCcccc---CcCC------------------CCCccccEEEeehHHEEEC
Confidence            999999999999999999999999999999976543   3210                  1369999999999999999


Q ss_pred             CCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee
Q 017336          158 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF  237 (373)
Q Consensus       158 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v  237 (373)
                      |+++++++||.+ .++.|||+++ +.++++++++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++.+
T Consensus       143 P~~l~~~~aa~~-~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v  220 (356)
T 1pl8_A          143 PDNVTFEEGALI-EPLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLV  220 (356)
T ss_dssp             CTTSCHHHHHHH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEE
T ss_pred             cCCCCHHHHHhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEE
Confidence            999999998876 4788999987 77899999999999999999999999999999789999999999999999999999


Q ss_pred             ecCCCCC-ccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEe
Q 017336          238 VNTSEHD-RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTF  315 (373)
Q Consensus       238 i~~~~~~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~  315 (373)
                      +++...+ .++.+.+++.+++++|+|||++|++..++.++++|+++ |+++.+|.....  ..++... +.+++++.|+.
T Consensus       221 i~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~g~~  297 (356)
T 1pl8_A          221 LQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGSEM--TTVPLLHAAIREVDIKGVF  297 (356)
T ss_dssp             EECSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCCSC--CCCCHHHHHHTTCEEEECC
T ss_pred             EcCcccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEecCCCC--CccCHHHHHhcceEEEEec
Confidence            9876311 23777787777668999999999977889999999997 999999975422  2333333 34889999875


Q ss_pred             ccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEecC
Q 017336          316 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME  372 (373)
Q Consensus       316 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~~  372 (373)
                      ..    .++++++++++.++++.+.++++++|+|+++++|++.+.++..+|++++++
T Consensus       298 ~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~~  350 (356)
T 1pl8_A          298 RY----CNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKGLGLKIMLKCD  350 (356)
T ss_dssp             SC----SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEECC
T ss_pred             cc----HHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCCCceEEEEeCC
Confidence            42    357999999999999988888999999999999999998885569999874

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=9.2e-58  Score=427.47  Aligned_cols=339  Identities=24%  Similarity=0.353  Sum_probs=295.8

Q ss_pred             cchhhhccCCCCeEEEEeecCC-CCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAP-PQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      |||+++.+++. ++++++|+|+ ++||||||||.++|||++|++.+.+..+ ..+|+++|||++|+|+++|++|+.+++|
T Consensus         1 MkAvv~~~~g~-l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~-~~~P~i~G~E~~G~V~~vG~~V~~~~~G   78 (346)
T 4a2c_A            1 MKSVVNDTDGI-VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGA-HYYPITLGHEFSGYIDAVGSGVDDLHPG   78 (346)
T ss_dssp             CEEEEECSSSC-EEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCS-SSSSBCCCCEEEEEEEEECTTCCSCCTT
T ss_pred             CCEEEEecCCC-EEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCC-CCCCccccEEEEEEEEEECCCcccccCC
Confidence            89999988886 9999999998 5799999999999999999998888654 4689999999999999999999999999


Q ss_pred             CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336           83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  162 (373)
Q Consensus        83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~  162 (373)
                      |||++.+...|+.|.+|+.|+++.|.+..+.   |..                   ..|+|+||+.+++++++++|++++
T Consensus        79 drV~~~~~~~~g~c~~c~~g~~~~c~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~iP~~l~  136 (346)
T 4a2c_A           79 DAVACVPLLPCFTCPECLKGFYSQCAKYDFI---GSR-------------------RDGGFAEYIVVKRKNVFALPTDMP  136 (346)
T ss_dssp             CEEEECCEECCSCSHHHHTTCGGGCSSCEEB---TTT-------------------BCCSSBSEEEEEGGGEEECCTTSC
T ss_pred             CeEEeeeccCCCCcccccCCccccCCCcccc---cCC-------------------CCcccccccccchheEEECCCCCC
Confidence            9999999999999999999999999987655   322                   246999999999999999999999


Q ss_pred             chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336          163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  242 (373)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~  242 (373)
                      +++||+++ .+.++++ +....+++++++|||+|+|++|++++|+|+.+|+..+++++++++|+++++++|+++++++.+
T Consensus       137 ~~~aa~l~-~~~~~~~-~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~  214 (346)
T 4a2c_A          137 IEDGAFIE-PITVGLH-AFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE  214 (346)
T ss_dssp             GGGGGGHH-HHHHHHH-HHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTT
T ss_pred             HHHHHhch-HHHHHHH-HHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCC
Confidence            99999876 4444444 567899999999999999999999999999999988889999999999999999999999988


Q ss_pred             CCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-h-hhcccceEEEEeccCC
Q 017336          243 HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-I-NVLNERTLKGTFFGNY  319 (373)
Q Consensus       243 ~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~-~~~~~~~i~g~~~~~~  319 (373)
                      .+  +.+.++..+++ ++|+|+|++|++..++.++++++++ |+++.+|....+..+.... . .+.+++++.|+.....
T Consensus       215 ~~--~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~  291 (346)
T 4a2c_A          215 MS--APQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYS  291 (346)
T ss_dssp             SC--HHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTT-CEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCC
T ss_pred             CC--HHHHHHhhcccCCcccccccccccchhhhhhheecCC-eEEEEEeccCCCccccccCHHHHhhceeEEEEEecccc
Confidence            76  77888888877 8999999999988999999999997 9999999876554433222 2 2348999999875432


Q ss_pred             C--CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          320 K--PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       320 ~--~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      .  ..++++++++++.+++++++++++++|+|+++++|++.+.+++. +|+||++
T Consensus       292 ~~~~~~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          292 SPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             SSTTCHHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             CcchHHHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence            2  23468899999999999999999999999999999999988875 5999864

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=4.1e-58  Score=428.66  Aligned_cols=335  Identities=27%  Similarity=0.448  Sum_probs=296.2

Q ss_pred             ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCCC
Q 017336            3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV   81 (373)
Q Consensus         3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~   81 (373)
                      +|||+++.++++++++++++.|+|+++||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|++
T Consensus         2 ~MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~v   81 (340)
T 3s2e_A            2 MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKE   81 (340)
T ss_dssp             EEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCSCCT
T ss_pred             ceEEEEEecCCCCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCcCCC
Confidence            5999999998888999999999999999999999999999999999987664 568999999999999999999999999


Q ss_pred             CCEEe-ecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           82 GDHVL-PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        82 Gd~V~-~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      ||||+ ..+..+|+.|.+|++|+++.|.+....   |+.                   ..|+|+||+.++++.++++|++
T Consensus        82 GdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~iP~~  139 (340)
T 3s2e_A           82 GDRVGVPWLYSACGYCEHCLQGWETLCEKQQNT---GYS-------------------VNGGYGEYVVADPNYVGLLPDK  139 (340)
T ss_dssp             TCEEEEESEEECCSSSHHHHTTCGGGCTTCEEB---TTT-------------------BCCSSBSEEEECTTTSEECCTT
T ss_pred             CCEEEecCCCCCCCCChHHhCcCcccCcccccc---CCC-------------------CCCcceeEEEechHHEEECCCC
Confidence            99994 567889999999999999999986654   322                   2469999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      +++++||++++++.|||+++ +.++++++++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++.++++
T Consensus       140 ~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~~  217 (340)
T 3s2e_A          140 VGFVEIAPILCAGVTVYKGL-KVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNA  217 (340)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHhhcccchhHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEeC
Confidence            99999999999999999986 67899999999999999999999999999999 89999999999999999999999998


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCC
Q 017336          241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNY  319 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~  319 (373)
                      .+.+  +.+.+++ +.+++|++||++|+++.++.++++|+++ |+++.+|.....  ....... +.+++++.|+..+. 
T Consensus       218 ~~~~--~~~~~~~-~~g~~d~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~g~~~~~-  290 (340)
T 3s2e_A          218 RDTD--PAAWLQK-EIGGAHGVLVTAVSPKAFSQAIGMVRRG-GTIALNGLPPGD--FGTPIFDVVLKGITIRGSIVGT-  290 (340)
T ss_dssp             TTSC--HHHHHHH-HHSSEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSCCSSE--EEEEHHHHHHTTCEEEECCSCC-
T ss_pred             CCcC--HHHHHHH-hCCCCCEEEEeCCCHHHHHHHHHHhccC-CEEEEeCCCCCC--CCCCHHHHHhCCeEEEEEecCC-
Confidence            8765  8888887 4448999999999889999999999997 999999986533  3333333 34899999886543 


Q ss_pred             CCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecCC
Q 017336          320 KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED  373 (373)
Q Consensus       320 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~~  373 (373)
                        .++++++++++.++++++   +.+.|+|+++++|++.+.+++. +|++|+++|
T Consensus       291 --~~~~~~~~~l~~~g~l~~---~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~~~~  340 (340)
T 3s2e_A          291 --RSDLQESLDFAAHGDVKA---TVSTAKLDDVNDVFGRLREGKVEGRVVLDFSR  340 (340)
T ss_dssp             --HHHHHHHHHHHHTTSCCC---CEEEECGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred             --HHHHHHHHHHHHhCCCCc---eEEEEeHHHHHHHHHHHHcCCCceEEEEecCC
Confidence              346899999999998865   3578899999999999998885 599999875

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=7.1e-58  Score=427.47  Aligned_cols=337  Identities=27%  Similarity=0.402  Sum_probs=294.6

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC---CCCCCccccccceEEEEEeCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |||+++.+++.+++++++|.|+|+++||+|||.++|||++|++.+.|.++   ...+|.++|||++|+|+++|++++.|+
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2dq4_A            1 MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQ   80 (343)
T ss_dssp             CEEEEECSSSSSCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCSSC
T ss_pred             CeEEEEeCCCCcEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCcCC
Confidence            78999999887799999999999999999999999999999999888654   356799999999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||||++.+..+|+.|.+|++|++|+|++....   |..                   ..|+|+||++++++.++++|++
T Consensus        81 vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~iP~~  138 (343)
T 2dq4_A           81 VGDHVSLESHIVCHACPACRTGNYHVCLNTQIL---GVD-------------------RDGGFAEYVVVPAENAWVNPKD  138 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEEB---TTT-------------------BCCSSBSEEEEEGGGEEEECTT
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCccee---cCC-------------------CCCcceeEEEEchHHeEECCCC
Confidence            999999999999999999999999999876533   321                   2369999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      +++++||.+. ++.|||+++.+.+++ ++++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++ ++.++++
T Consensus       139 ~~~~~aa~~~-~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~  215 (343)
T 2dq4_A          139 LPFEVAAILE-PFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNP  215 (343)
T ss_dssp             SCHHHHTTHH-HHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECT
T ss_pred             CCHHHHHhhh-HHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCc
Confidence            9999998874 778999987547889 999999999999999999999999986799999999999999999 9999988


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-hh-hcccceEEEEeccC
Q 017336          241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-IN-VLNERTLKGTFFGN  318 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~-~~~~~~i~g~~~~~  318 (373)
                      .+.+  +.+.+++.+++++|+|||++|++..++.++++|+++ |+++.+|.....  ..++. .. +.+++++.|+... 
T Consensus       216 ~~~~--~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~--~~~~~~~~~~~~~~~i~g~~~~-  289 (343)
T 2dq4_A          216 LEED--LLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIPSDP--IRFDLAGELVMRGITAFGIAGR-  289 (343)
T ss_dssp             TTSC--HHHHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCSSC--EEECHHHHTGGGTCEEEECCSC-
T ss_pred             CccC--HHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCC--ceeCcHHHHHhCceEEEEeecC-
Confidence            7655  888888888448999999999978899999999997 999999986533  33333 32 4489999987543 


Q ss_pred             CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEecC
Q 017336          319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME  372 (373)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~~  372 (373)
                       ...++++++++++++++++++++++++|+|+++++|++.+.+++.+|++++++
T Consensus       290 -~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvv~~~~  342 (343)
T 2dq4_A          290 -RLWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQAVKVILDPK  342 (343)
T ss_dssp             -CTTHHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSCSEEEEETT
T ss_pred             -CCHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCceEEEEeeC
Confidence             12456899999999999888888999999999999999998877789999875

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=1.1e-57  Score=427.68  Aligned_cols=342  Identities=23%  Similarity=0.335  Sum_probs=297.6

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccc-ccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLY-FWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~-~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      |||+++.++++ ++++++|.|+|+++||+|||.+++||++|++ .+.|..+ ..+|.++|||++|+|+++|+++++|++|
T Consensus         1 MkA~~~~~~~~-~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~p~v~G~E~~G~V~~vG~~v~~~~vG   78 (352)
T 3fpc_A            1 MKGFAMLSIGK-VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG-ERHNMILGHEAVGEVVEVGSEVKDFKPG   78 (352)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTC-CCSSEECCCEEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEccCCC-ceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCC-CCCCcccCCcceEEEEEECCCCCcCCCC
Confidence            79999999888 8999999999999999999999999999999 5566554 4679999999999999999999999999


Q ss_pred             CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC--ceEeCCCC
Q 017336           83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL  160 (373)
Q Consensus        83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p~~  160 (373)
                      |||++.+..+|+.|.+|++|+++.|.........|                   ....|+|+||+.+++.  .++++|++
T Consensus        79 drV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~-------------------~~~~G~~aey~~v~~~~~~~~~iP~~  139 (352)
T 3fpc_A           79 DRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFS-------------------NVKDGVFGEFFHVNDADMNLAHLPKE  139 (352)
T ss_dssp             CEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBT-------------------TTBCCSSBSCEEESSHHHHCEECCTT
T ss_pred             CEEEEccccCCCCchhhcCCCcCCccccccccccc-------------------cCCCCcccceEEeccccCeEEECCCC
Confidence            99999999999999999999999997543211111                   1124799999999976  99999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      +++++||.+++++.|||+++ +.++++++++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++++
T Consensus       140 ~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~  218 (352)
T 3fpc_A          140 IPLEAAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINY  218 (352)
T ss_dssp             SCHHHHTTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECG
T ss_pred             CCHHHHhhccchhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcC
Confidence            99999999999999999986 78999999999999999999999999999999789999999999999999999999998


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh---cccceEEEEec
Q 017336          241 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV---LNERTLKGTFF  316 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~---~~~~~i~g~~~  316 (373)
                      .+.+  +.+.+++.+++ ++|+|||++|++..++.++++|+++ |+++.+|.......+.+....+   .+++++.++..
T Consensus       219 ~~~~--~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~  295 (352)
T 3fpc_A          219 KNGD--IVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLC  295 (352)
T ss_dssp             GGSC--HHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCC
T ss_pred             CCcC--HHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEecccCCCCceecchhHhhhhccccEEEEeec
Confidence            7765  88999999988 8999999999988899999999997 9999999876554455444322   37788888754


Q ss_pred             cCCCCCCCHHHHHHHHHcCCCCCCCceeeeec-cccHHHHHHHHHcCC-c-eeEEEecC
Q 017336          317 GNYKPRTDLPSVVDMYMNKQLELEKFITHRIP-FSEINKAFEYMVKGE-G-LRCIISME  372 (373)
Q Consensus       317 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-l~~~~~a~~~l~~~~-~-~k~v~~~~  372 (373)
                      ..  ..+++++++++++++++++.++++++|+ |+++++|++.+.+++ . .|++|++.
T Consensus       296 ~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~  352 (352)
T 3fpc_A          296 PG--GRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA  352 (352)
T ss_dssp             CC--HHHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred             cC--chhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence            22  1346899999999999999888999999 999999999998865 3 59999874

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=1.8e-57  Score=428.08  Aligned_cols=339  Identities=22%  Similarity=0.327  Sum_probs=292.1

Q ss_pred             cccchhhhccCCCCeEEEEeecC--------CCCCCeEEEEEeeeecCcccccccccCC---CCCCCCccccccceEEEE
Q 017336            2 SSTAAAVAWEAGKPLIIQDVEVA--------PPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGVVE   70 (373)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~p--------~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~~~~p~i~G~e~~G~V~   70 (373)
                      ++|||+++..++. ++++++|.|        +|+++||||||.++|||++|++.+.+..   ....+|.++|||++|+|+
T Consensus         7 ~~mka~~~~~~~~-l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G~V~   85 (363)
T 3m6i_A            7 KTNIGVFTNPQHD-LWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVI   85 (363)
T ss_dssp             SCCEEEEECTTCC-EEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEE
T ss_pred             ccceeEEEeCCCc-EEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEEEEE
Confidence            3699999887666 999999999        9999999999999999999999887432   124679999999999999


Q ss_pred             EeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEe
Q 017336           71 SVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVH  150 (373)
Q Consensus        71 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~  150 (373)
                      ++|+++++|++||||++.+..+|+.|.+|++|++|.|++..+.   |...                  ..|+|+||+.++
T Consensus        86 ~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~---g~~~------------------~~G~~aey~~v~  144 (363)
T 3m6i_A           86 AVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFL---STPP------------------VPGLLRRYVNHP  144 (363)
T ss_dssp             EECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEET---TSTT------------------SCCSCBSEEEEE
T ss_pred             EECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCcccc---CCCC------------------CCccceeEEEEe
Confidence            9999999999999999999999999999999999999986654   3221                  236999999999


Q ss_pred             cCceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH
Q 017336          151 SGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  230 (373)
Q Consensus       151 ~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~  230 (373)
                      ++.++++|+ +++++||++. ++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++
T Consensus       145 ~~~~~~iP~-~s~~~aa~~~-~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~  221 (363)
T 3m6i_A          145 AVWCHKIGN-MSYENGAMLE-PLSVALAGL-QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAK  221 (363)
T ss_dssp             GGGEEECTT-CCHHHHHHHH-HHHHHHHHH-HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH
T ss_pred             hhhEEECCC-CCHHHHHhhh-HHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence            999999999 9999999884 788999986 7899999999999999999999999999999966999999999999999


Q ss_pred             hcCCceeecCCC---CCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-h
Q 017336          231 KFGVTDFVNTSE---HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-V  305 (373)
Q Consensus       231 ~lg~~~vi~~~~---~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~  305 (373)
                      ++ ++.++++..   ...++.+.+++.+++ ++|+|||++|++..++.++++|+++ |+++.+|.......  ++... +
T Consensus       222 ~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~--~~~~~~~  297 (363)
T 3m6i_A          222 EI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG-GKVFVIGVGKNEIQ--IPFMRAS  297 (363)
T ss_dssp             HH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECCCCCSCCC--CCHHHHH
T ss_pred             Hh-chhcccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEccCCCCcc--ccHHHHH
Confidence            99 766655431   223488889999877 9999999999977899999999997 99999998654333  33333 3


Q ss_pred             cccceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC--ceeEEEecCC
Q 017336          306 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE--GLRCIISMED  373 (373)
Q Consensus       306 ~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~--~~k~v~~~~~  373 (373)
                      .+++++.++..+    .++++++++++.+|++++.++++++|+|+++++|++.+.+++  .+|++|+.+|
T Consensus       298 ~~~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  363 (363)
T 3m6i_A          298 VREVDLQFQYRY----CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSLE  363 (363)
T ss_dssp             HHTCEEEECCSC----SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred             hcCcEEEEccCC----HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence            488999987643    568999999999999998888999999999999999999873  4599998764

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.9e-57  Score=423.25  Aligned_cols=337  Identities=25%  Similarity=0.409  Sum_probs=290.5

Q ss_pred             ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccc-CCC--CCCCCccccccceEEEEEeCCCCCCC
Q 017336            3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWES-KGQ--TPLFPRIFGHEAAGVVESVGEGVSDL   79 (373)
Q Consensus         3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g-~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~   79 (373)
                      +|||+++.+++. +++++.|.|+|+++||+|||.+++||++|++.+.+ ...  ...+|.++|||++|+|+++|++++.|
T Consensus         4 ~mka~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~   82 (352)
T 1e3j_A            4 DNLSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHL   82 (352)
T ss_dssp             CCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSC
T ss_pred             cCEEEEEEcCCc-EEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCCCC
Confidence            499999998765 99999999999999999999999999999998874 222  23579999999999999999999999


Q ss_pred             CCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC
Q 017336           80 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP  159 (373)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~  159 (373)
                      ++||||++.+..+|+.|.+|++|+++.|++..+.   |...                  ..|+|+||++++++.++++|+
T Consensus        83 ~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~~------------------~~G~~aey~~v~~~~~~~iP~  141 (352)
T 1e3j_A           83 KKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC---ATPP------------------DDGNLARYYVHAADFCHKLPD  141 (352)
T ss_dssp             CTTCEEEECCEECCSSSHHHHTTCGGGCTTCEET---TBTT------------------BCCSCBSEEEEEGGGEEECCT
T ss_pred             CCCCEEEEcCcCCCCCChhhhCcCcccCCCCccc---CcCC------------------CCccceeEEEeChHHeEECcC
Confidence            9999999999999999999999999999976543   3210                  136999999999999999999


Q ss_pred             CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      ++++++||.+ .++.|||+++ +.++++++++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++.+++
T Consensus       142 ~~~~~~aa~~-~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~  218 (352)
T 1e3j_A          142 NVSLEEGALL-EPLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLV  218 (352)
T ss_dssp             TSCHHHHHTH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred             CCCHHHHHhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEc
Confidence            9999999876 4788999987 77899999999999999999999999999999 6999999999999999999999998


Q ss_pred             CCC-CCccHHHHHHHHcC---C-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEE
Q 017336          240 TSE-HDRPIQEVIAEMTN---G-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKG  313 (373)
Q Consensus       240 ~~~-~~~~~~~~~~~~~~---~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g  313 (373)
                      +.+ .+  +.+.+.+.++   + ++|+|||++|++..++.++++|+++ |+++.+|.....  ..++... +.+++++.|
T Consensus       219 ~~~~~~--~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~g  293 (352)
T 1e3j_A          219 VDPAKE--EESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGSQM--VTVPLVNACAREIDIKS  293 (352)
T ss_dssp             CCTTTS--CHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCSSC--CCCCHHHHHTTTCEEEE
T ss_pred             Cccccc--HHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCC--ccccHHHHHhcCcEEEE
Confidence            774 43  6677777775   4 8999999999977889999999997 999999975432  2233333 348899988


Q ss_pred             EeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC--ceeEEEecCC
Q 017336          314 TFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE--GLRCIISMED  373 (373)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~--~~k~v~~~~~  373 (373)
                      +...    .++++++++++.++++.+.++++++|+|+++++|++.+.+++  .+|+++++++
T Consensus       294 ~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  351 (352)
T 1e3j_A          294 VFRY----CNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCRQ  351 (352)
T ss_dssp             CCSC----SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECCC
T ss_pred             eccc----hHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecCC
Confidence            7542    357999999999999988888999999999999999998886  4699998763

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=4.5e-57  Score=422.46  Aligned_cols=338  Identities=23%  Similarity=0.346  Sum_probs=292.7

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC--CCCCCccccccceEEEEEeCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEV   81 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~   81 (373)
                      |||+++.++++++++++++.|+|+++||||||.+++||++|++.+.|.++  ...+|.++|||++|+|+++|+++++|++
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v   80 (345)
T 3jv7_A            1 MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGV   80 (345)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEcCCCCceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCCCC
Confidence            79999999998899999999999999999999999999999999988654  2568999999999999999999999999


Q ss_pred             CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEe-cCceEeCCCC
Q 017336           82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVH-SGCVAKINPL  160 (373)
Q Consensus        82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~-~~~~~~~p~~  160 (373)
                      ||||++.+..+|+.|.+|++|+++.|......   |...    .          .....|+|+||+.++ ++.++++|+ 
T Consensus        81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~---~~~~----~----------g~~~~G~~aey~~v~~~~~~~~~p~-  142 (345)
T 3jv7_A           81 GDAVAVYGPWGCGACHACARGRENYCTRAADL---GITP----P----------GLGSPGSMAEYMIVDSARHLVPIGD-  142 (345)
T ss_dssp             TCEEEECCSCCCSSSHHHHTTCGGGCSSHHHH---TCCC----B----------TTTBCCSSBSEEEESCGGGEEECTT-
T ss_pred             CCEEEEecCCCCCCChHHHCcCcCcCcccccc---cccc----C----------CcCCCceeeEEEEecchhceEeCCC-
Confidence            99999999999999999999999999432211   0000    0          011246999999999 999999999 


Q ss_pred             CCchhhhhcccchhhhhhhhhh-ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          161 APLDKVCILSCGVSTGLGATLN-VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~-~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      +++++||+++++++|||+++.+ ...++++++|||+|+|++|++++|+|+.+|..+|++++++++|+++++++|++.+++
T Consensus       143 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~  222 (345)
T 3jv7_A          143 LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVK  222 (345)
T ss_dssp             CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEc
Confidence            9999999999999999999776 458999999999999999999999999995449999999999999999999999998


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCC-CceeeccchhhcccceEEEEecc
Q 017336          240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK-DAVFMTKPINVLNERTLKGTFFG  317 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~  317 (373)
                      +++ +  +.+.+++.+++ ++|+|||++|++..++.++++|+++ |+++.+|.... ...++  ...+.+++++.++..+
T Consensus       223 ~~~-~--~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~--~~~~~~~~~i~g~~~~  296 (345)
T 3jv7_A          223 SGA-G--AADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAGAHAKVG--FFMIPFGASVVTPYWG  296 (345)
T ss_dssp             CST-T--HHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSCCTTCCEEES--TTTSCTTCEEECCCSC
T ss_pred             CCC-c--HHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCCCCCCcC--HHHHhCCCEEEEEecC
Confidence            865 3  88899999988 9999999999977999999999997 99999998764 33333  3334589999987654


Q ss_pred             CCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          318 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      .   .++++++++++.++++++   ++++|+|+++++|++.+.+++. +|+||++
T Consensus       297 ~---~~~~~~~~~l~~~g~l~~---~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          297 T---RSELMEVVALARAGRLDI---HTETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             C---HHHHHHHHHHHHTTCCCC---CEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             C---HHHHHHHHHHHHcCCCce---EEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence            3   356899999999998875   4689999999999999998885 5998864

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.4e-57  Score=426.18  Aligned_cols=333  Identities=25%  Similarity=0.380  Sum_probs=287.2

Q ss_pred             CcccchhhhccCCCCeEEEEeecCC-CCCCeEEEEEeeeecCcccccccccCCC---CCCCCccccccceEEEEEeCCCC
Q 017336            1 MSSTAAAVAWEAGKPLIIQDVEVAP-PQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGV   76 (373)
Q Consensus         1 m~~~~a~~~~~~~~~~~~~~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v   76 (373)
                      |++|||+++.+++.+++++++|.|+ |+++||+|||.++|||++|++.+.|.++   ...+|.++|||++|+|+++|++|
T Consensus        13 ~~~mka~~~~~~g~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v   92 (359)
T 1h2b_A           13 VERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGV   92 (359)
T ss_dssp             ----CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTC
T ss_pred             hhhceEEEEecCCCCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECCCC
Confidence            3569999999988779999999999 9999999999999999999999988664   34689999999999999999999


Q ss_pred             CCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEe
Q 017336           77 SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK  156 (373)
Q Consensus        77 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~  156 (373)
                      ++|++||||+..+..+|+.|.+|++|++++|++....   |+.                   ..|+|+||++++++.+++
T Consensus        93 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~---G~~-------------------~~G~~aey~~v~~~~~~~  150 (359)
T 1h2b_A           93 EGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFP---GLN-------------------IDGGFAEFMRTSHRSVIK  150 (359)
T ss_dssp             CSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCB---TTT-------------------BCCSSBSEEEECGGGEEE
T ss_pred             CCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCcccc---ccC-------------------CCCcccceEEechHhEEE
Confidence            9999999999999999999999999999999876533   321                   236999999999999999


Q ss_pred             CCCCCCchhhh---hcccchhhhhhhhhhc-cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHh
Q 017336          157 INPLAPLDKVC---ILSCGVSTGLGATLNV-AKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKK  231 (373)
Q Consensus       157 ~p~~~~~~~aa---~~~~~~~ta~~~l~~~-~~~~~~~~vlI~G~g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~~~~  231 (373)
                      +|+++++++||   .+++++.|||+++.+. ++++++++|||+|+|++|++++|+|+.+ |+ +|++++++++|++++++
T Consensus       151 iP~~~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~~  229 (359)
T 1h2b_A          151 LPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAER  229 (359)
T ss_dssp             CCTTCCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHHH
T ss_pred             CCCCCCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHH
Confidence            99999999998   7888899999987655 8999999999999999999999999999 99 89999999999999999


Q ss_pred             cCCceeecCCCCCccHHHHHHHHcCC-CccEEEEccCChH--hHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcc
Q 017336          232 FGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNID--NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLN  307 (373)
Q Consensus       232 lg~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~--~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~  307 (373)
                      +|+++++++++.   +.+.+++.+++ ++|+|||++|++.  .++.++++  ++ |+++.+|.....   .++... +.+
T Consensus       230 lGa~~vi~~~~~---~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~-G~~v~~g~~~~~---~~~~~~~~~~  300 (359)
T 1h2b_A          230 LGADHVVDARRD---PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RM-GRLIIVGYGGEL---RFPTIRVISS  300 (359)
T ss_dssp             TTCSEEEETTSC---HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EE-EEEEECCCSSCC---CCCHHHHHHT
T ss_pred             hCCCEEEeccch---HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CC-CEEEEEeCCCCC---CCCHHHHHhC
Confidence            999999988653   77788888877 8999999999965  78888887  75 999999986533   333333 348


Q ss_pred             cceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          308 ERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       308 ~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      ++++.|+....   .+++.++++++.++++.+  .+ ++|+|+++++|++.+.+++. +|+++++
T Consensus       301 ~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~--~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          301 EVSFEGSLVGN---YVELHELVTLALQGKVRV--EV-DIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             TCEEEECCSCC---HHHHHHHHHHHHTTSCCC--CE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             CcEEEEecCCC---HHHHHHHHHHHHcCCCcc--eE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence            99999876432   346899999999998754  46 99999999999999998874 6999864

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=6.7e-56  Score=413.33  Aligned_cols=334  Identities=29%  Similarity=0.476  Sum_probs=289.9

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      |||+++.+++.++++++.|.|+|+++||+|||.++|||++|++.+.|.++ ...+|.++|||++|+|+++|++++.|++|
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~vG   80 (339)
T 1rjw_A            1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG   80 (339)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcCCCC
Confidence            79999999886799999999999999999999999999999999888655 24679999999999999999999999999


Q ss_pred             CEEeecCcC-CCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336           83 DHVLPVFTG-ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  161 (373)
Q Consensus        83 d~V~~~~~~-~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~  161 (373)
                      |||++.+.. .|+.|.+|++|+++.|++....   |..                   ..|+|+||+.++++.++++|+++
T Consensus        81 drV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~~P~~~  138 (339)
T 1rjw_A           81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKNA---GYS-------------------VDGGYAEYCRAAADYVVKIPDNL  138 (339)
T ss_dssp             CEEEECSEEECCSCSHHHHTTCGGGCTTCEEB---TTT-------------------BCCSSBSEEEEEGGGCEECCTTS
T ss_pred             CEEEEecCCCCCCCCchhhCcCcccCCCccee---ecC-------------------CCCcceeeEEechHHEEECCCCC
Confidence            999987654 5999999999999999876533   321                   23699999999999999999999


Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  241 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~  241 (373)
                      ++++||++++++.|||+++.. .+++++++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++++|++.++++.
T Consensus       139 ~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d~~  216 (339)
T 1rjw_A          139 SFEEAAPIFCAGVTTYKALKV-TGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPL  216 (339)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHH-HTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTT
T ss_pred             CHHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEecCC
Confidence            999999999999999998754 589999999999998899999999999999 899999999999999999999999887


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEeccCCC
Q 017336          242 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYK  320 (373)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~  320 (373)
                      +.+  +.+.+.+.+ +++|++||++|.+..++.++++|+++ |+++.+|.....  +.++...+ .+++++.|+....  
T Consensus       217 ~~~--~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~--  288 (339)
T 1rjw_A          217 KED--AAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEE--MPIPIFDTVLNGIKIIGSIVGT--  288 (339)
T ss_dssp             TSC--HHHHHHHHH-SSEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSSE--EEEEHHHHHHTTCEEEECCSCC--
T ss_pred             Ccc--HHHHHHHHh-CCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCC--CccCHHHHHhCCcEEEEeccCC--
Confidence            654  778888777 58999999999878899999999997 999999986533  33333333 4899999876432  


Q ss_pred             CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC-ceeEEEecCC
Q 017336          321 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-GLRCIISMED  373 (373)
Q Consensus       321 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~-~~k~v~~~~~  373 (373)
                       .++++++++++.++++++.   +++|+|+++++|++.+.+++ .+|+++++++
T Consensus       289 -~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  338 (339)
T 1rjw_A          289 -RKDLQEALQFAAEGKVKTI---IEVQPLEKINEVFDRMLKGQINGRVVLTLED  338 (339)
T ss_dssp             -HHHHHHHHHHHHTTSCCCC---EEEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             -HHHHHHHHHHHHcCCCCcc---EEEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence             2468899999999988653   57999999999999998886 4699998864

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.6e-56  Score=423.64  Aligned_cols=346  Identities=26%  Similarity=0.386  Sum_probs=291.6

Q ss_pred             ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCC-----
Q 017336            3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVS-----   77 (373)
Q Consensus         3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~-----   77 (373)
                      +|||+++.++++.++++++|.|+|+++||||||.++|||++|++.+.|.++...+|.++|||++|+|+++| +|+     
T Consensus        17 ~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~P~v~GhE~~G~V~~vG-~V~~~~~~   95 (380)
T 1vj0_A           17 KAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVN-GEKRDLNG   95 (380)
T ss_dssp             EEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEES-SCCBCTTS
T ss_pred             heEEEEEecCCCCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCCCCCCcccCcCcEEEEEEeC-CccccccC
Confidence            49999999998559999999999999999999999999999999998866545689999999999999999 999     


Q ss_pred             -CCCCCCEEeecCcCCCCCCcccc-CCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEE-ecCce
Q 017336           78 -DLEVGDHVLPVFTGECGDCRHCR-SDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVV-HSGCV  154 (373)
Q Consensus        78 -~~~~Gd~V~~~~~~~~~~~~~c~-~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v-~~~~~  154 (373)
                       .|++||||++.+..+|+.|.+|+ +|+++.|++....   |....++.           .....|+|+||+++ +++.+
T Consensus        96 ~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~---g~~~~~~~-----------~~~~~G~~aey~~v~~~~~~  161 (380)
T 1vj0_A           96 ELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVY---GINRGCSE-----------YPHLRGCYSSHIVLDPETDV  161 (380)
T ss_dssp             CBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEET---TTTCCSSS-----------TTCCCSSSBSEEEECTTCCE
T ss_pred             CCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCccee---ccccccCC-----------CCCCCccccceEEEcccceE
Confidence             99999999999999999999999 9999999876433   32100000           00123699999999 99999


Q ss_pred             EeCCCCCCch-hhhhcccchhhhhhhhhhccC-CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc
Q 017336          155 AKINPLAPLD-KVCILSCGVSTGLGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF  232 (373)
Q Consensus       155 ~~~p~~~~~~-~aa~~~~~~~ta~~~l~~~~~-~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l  232 (373)
                      +++|++++++ +|+.++ +++|||+++ +.++ ++++++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++
T Consensus       162 ~~iP~~l~~~~~Aa~~~-~~~ta~~al-~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l  239 (380)
T 1vj0_A          162 LKVSEKDDLDVLAMAMC-SGATAYHAF-DEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI  239 (380)
T ss_dssp             EEECTTSCHHHHHHHTT-HHHHHHHHH-HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT
T ss_pred             EECCCCCChHHhHhhhc-HHHHHHHHH-HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc
Confidence            9999999999 666666 999999997 5678 99999999999999999999999999944899999999999999999


Q ss_pred             CCceeecCCC-CCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC-CCceeeccchh--hcc
Q 017336          233 GVTDFVNTSE-HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS-KDAVFMTKPIN--VLN  307 (373)
Q Consensus       233 g~~~vi~~~~-~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~-~~~~~~~~~~~--~~~  307 (373)
                      |++.++++.. .+.++.+.+++.+++ ++|+|||++|++..+..++++|+++ |+++.+|... .. ...++...  +.+
T Consensus       240 Ga~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~-~~~~~~~~~~~~~  317 (380)
T 1vj0_A          240 GADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQD-PVPFKVYEWLVLK  317 (380)
T ss_dssp             TCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCC-CEEECHHHHTTTT
T ss_pred             CCcEEEeccccCcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCC-CeeEchHHHHHhC
Confidence            9999998761 012377888888887 8999999999877899999999997 9999999865 31 23333333  448


Q ss_pred             cceEEEEeccCCCCCCCHHHHHHHHHc--CCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEecC
Q 017336          308 ERTLKGTFFGNYKPRTDLPSVVDMYMN--KQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME  372 (373)
Q Consensus       308 ~~~i~g~~~~~~~~~~~~~~~~~~l~~--~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~~  372 (373)
                      ++++.|+..+.   .++++++++++.+  +++  +++++++|+|+++++|++.+.+++..|++|+++
T Consensus       318 ~~~i~g~~~~~---~~~~~~~~~l~~~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvl~~~  379 (380)
T 1vj0_A          318 NATFKGIWVSD---TSHFVKTVSITSRNYQLL--SKLITHRLPLKEANKALELMESREALKVILYPE  379 (380)
T ss_dssp             TCEEEECCCCC---HHHHHHHHHHHHTCHHHH--GGGCCEEEEGGGHHHHHHHHHHTSCSCEEEECC
T ss_pred             CeEEEEeecCC---HHHHHHHHHHHHhhcCCe--eeEEEEEEeHHHHHHHHHHHhcCCCceEEEEeC
Confidence            99999976542   3468999999999  877  566889999999999999998876449998874

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=1.9e-56  Score=417.91  Aligned_cols=332  Identities=28%  Similarity=0.428  Sum_probs=266.9

Q ss_pred             CcccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC--CCCCCccccccceEEEEEeCCCCCC
Q 017336            1 MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ--TPLFPRIFGHEAAGVVESVGEGVSD   78 (373)
Q Consensus         1 m~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--~~~~p~i~G~e~~G~V~~vG~~v~~   78 (373)
                      |.+|||+++.++++++++++++.|+|+++||+|||.++|||++|++.+.|.++  ...+|.++|||++|+|+++|++ ++
T Consensus         1 m~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~   79 (344)
T 2h6e_A            1 MVKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AK   79 (344)
T ss_dssp             CEEEEBCEECSCCC-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CC
T ss_pred             CceeEEEEEecCCCCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CC
Confidence            88999999999887799999999999999999999999999999999988765  3468999999999999999999 99


Q ss_pred             CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEe-cCceEeC
Q 017336           79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVH-SGCVAKI  157 (373)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~-~~~~~~~  157 (373)
                      |++||||+..+..+|+.|.+|++|++|+|++....   |..                   ..|+|+||++++ ++.++++
T Consensus        80 ~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~---G~~-------------------~~G~~aey~~v~~~~~~~~i  137 (344)
T 2h6e_A           80 VKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIP---GQT-------------------TNGGFSEYMLVKSSRWLVKL  137 (344)
T ss_dssp             CCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCB---TTT-------------------BCCSSBSEEEESCGGGEEEE
T ss_pred             CCCCCEEEECCCCCCCCChhhhCCCcccCCCcccc---ccc-------------------cCCcceeeEEecCcccEEEe
Confidence            99999999888899999999999999999875432   321                   236999999999 9999999


Q ss_pred             CCCCCchhhhhcccchhhhhhhhhhc----cCCCCCCEEEEECCCHHHHHHHHHHHHc--CCcEEEEEcCChhHHHHHHh
Q 017336          158 NPLAPLDKVCILSCGVSTGLGATLNV----AKPERGSSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKK  231 (373)
Q Consensus       158 p~~~~~~~aa~~~~~~~ta~~~l~~~----~~~~~~~~vlI~G~g~~G~~ai~la~~~--g~~~V~~~~~~~~~~~~~~~  231 (373)
                       +++++++||++++++.|||+++...    +++ ++++|||+|+|++|++++|+|+.+  |+ +|+++++++++++++++
T Consensus       138 -~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~  214 (344)
T 2h6e_A          138 -NSLSPVEAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALE  214 (344)
T ss_dssp             -SSSCHHHHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHH
T ss_pred             -CCCCHHHhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHH
Confidence             9999999999999999999997654    288 999999999999999999999999  99 79999999999999999


Q ss_pred             cCCceeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccc
Q 017336          232 FGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNER  309 (373)
Q Consensus       232 lg~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~  309 (373)
                      +|++.++++.+.    .+.+.+.+.+ ++|+|||++|++..++.++++++++ |+++.+|.....  ..++... +.+++
T Consensus       215 lGa~~vi~~~~~----~~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~--~~~~~~~~~~~~~  287 (344)
T 2h6e_A          215 LGADYVSEMKDA----ESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGMEGKR--VSLEAFDTAVWNK  287 (344)
T ss_dssp             HTCSEEECHHHH----HHHHHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSSC--CCCCHHHHHHTTC
T ss_pred             hCCCEEeccccc----hHHHHHhhcCCCccEEEECCCChHHHHHHHHHhhcC-CEEEEeCCCCCC--cccCHHHHhhCCc
Confidence            999999876430    1224455556 8999999999976899999999997 999999986533  2333333 34899


Q ss_pred             eEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          310 TLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       310 ~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      ++.|+....   .++++++++++.++++.+  .+ ++|+|+++++|++.+.+++. +|+++++
T Consensus       288 ~i~g~~~~~---~~~~~~~~~l~~~g~i~~--~i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          288 KLLGSNYGS---LNDLEDVVRLSESGKIKP--YI-IKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             EEEECCSCC---HHHHHHHHHHHHTTSSCC--CE-EEECC----------------CEEEECC
T ss_pred             EEEEEecCC---HHHHHHHHHHHHcCCCCc--ce-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence            999876432   346899999999998764  36 99999999999999988774 6998864

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=1.3e-56  Score=419.70  Aligned_cols=336  Identities=23%  Similarity=0.362  Sum_probs=283.4

Q ss_pred             ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      +|||+++.++++++++++++.|+|+++||||||.++|||++|++.+.|.++...+|.++|||++|+|+++|+++++|++|
T Consensus         4 ~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~vG   83 (348)
T 3two_A            4 QSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEIAGIIKEVGKGVKKFKIG   83 (348)
T ss_dssp             EEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSCCCSSBCCCCCEEEEEEEECTTCCSCCTT
T ss_pred             EEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCCCCC
Confidence            69999999998889999999999999999999999999999999999987777889999999999999999999999999


Q ss_pred             CEEeecCc-CCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336           83 DHVLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  161 (373)
Q Consensus        83 d~V~~~~~-~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~  161 (373)
                      |||++.+. .+|+.|.+|++|+++.|. ....   |+.....    ...|     ....|+|+||++++++.++++|+++
T Consensus        84 drV~~~~~~~~Cg~C~~C~~g~~~~c~-~~~~---~~~~~~~----~~~~-----~~~~G~~aey~~v~~~~~~~iP~~~  150 (348)
T 3two_A           84 DVVGVGCFVNSCKACKPCKEHQEQFCT-KVVF---TYDCLDS----FHDN-----EPHMGGYSNNIVVDENYVISVDKNA  150 (348)
T ss_dssp             CEEEECSEEECCSCSHHHHTTCGGGCT-TCEE---SSSSEEG----GGTT-----EECCCSSBSEEEEEGGGCEECCTTS
T ss_pred             CEEEEeCCcCCCCCChhHhCCCcccCc-cccc---ccccccc----cccC-----CcCCccccceEEechhhEEECCCCC
Confidence            99988654 799999999999999998 3222   2110000    0000     1123799999999999999999999


Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  241 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~  241 (373)
                      ++++||++++++.|||+++. ..+++++++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++.++ .+
T Consensus       151 ~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~-~~  227 (348)
T 3two_A          151 PLEKVAPLLCAGITTYSPLK-FSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY-TD  227 (348)
T ss_dssp             CHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHTTCSEEE-SS
T ss_pred             CHHHhhhhhhhHHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCeec-CC
Confidence            99999999999999999865 5699999999999999999999999999999 899999999999999999999988 22


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC-CCce-eeccchhh-cccceEEEEeccC
Q 017336          242 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS-KDAV-FMTKPINV-LNERTLKGTFFGN  318 (373)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~-~~~~-~~~~~~~~-~~~~~i~g~~~~~  318 (373)
                      ...      +    ..++|+|||++|++..++.++++|+++ |+++.+|... .... ++.. ..+ .+++++.|+..+.
T Consensus       228 ~~~------~----~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~-~~~~~~~~~i~g~~~~~  295 (348)
T 3two_A          228 PKQ------C----KEELDFIISTIPTHYDLKDYLKLLTYN-GDLALVGLPPVEVAPVLSVF-DFIHLGNRKVYGSLIGG  295 (348)
T ss_dssp             GGG------C----CSCEEEEEECCCSCCCHHHHHTTEEEE-EEEEECCCCCGGGCCEEEHH-HHHHTCSCEEEECCSCC
T ss_pred             HHH------H----hcCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECCCCCCCcccCCHH-HHHhhCCeEEEEEecCC
Confidence            211      1    117999999999966899999999997 9999999865 3222 2222 223 6899999987543


Q ss_pred             CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336          319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                      .   +++.++++++.++++.+.   +++|+|+++++|++.+.+++. +|+||+++
T Consensus       296 ~---~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~~gKvVi~~~  344 (348)
T 3two_A          296 I---KETQEMVDFSIKHNIYPE---IDLILGKDIDTAYHNLTHGKAKFRYVIDMK  344 (348)
T ss_dssp             H---HHHHHHHHHHHHTTCCCC---EEEECGGGHHHHHHHHHTTCCCSEEEEEGG
T ss_pred             H---HHHHHHHHHHHhCCCCce---EEEEEHHHHHHHHHHHHcCCCceEEEEecC
Confidence            2   468999999999988663   489999999999999999885 69999985

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=2.4e-55  Score=410.31  Aligned_cols=335  Identities=22%  Similarity=0.377  Sum_probs=292.2

Q ss_pred             cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 017336            4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |||+++.+++.+  +++++.+.|+|+++||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus         1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFA   80 (343)
T ss_dssp             CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSCC
T ss_pred             CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCCC
Confidence            789999998875  889999999999999999999999999999999886643 46799999999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||||++.+..+|+.|.+|++|++|.|++....   |..                   ..|+|+||+.++++.++++|++
T Consensus        81 vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~---G~~-------------------~~G~~aey~~v~~~~~~~~P~~  138 (343)
T 2eih_A           81 PGDEVVINPGLSCGRCERCLAGEDNLCPRYQIL---GEH-------------------RHGTYAEYVVLPEANLAPKPKN  138 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEET---TTS-------------------SCCSSBSEEEEEGGGEEECCTT
T ss_pred             CCCEEEECCCCCcccchhhccCccccccccccc---CcC-------------------CCccceeEEEeChHHeEECCCC
Confidence            999999999999999999999999999876533   321                   1369999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      +++++||+++++++|||+++.+.++++++++|||+|+ |++|++++|+++.+|+ +|+++++++++++.++++|++.+++
T Consensus       139 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~d  217 (343)
T 2eih_A          139 LSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVN  217 (343)
T ss_dssp             SCHHHHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEc
Confidence            9999999999999999999876679999999999998 9999999999999999 8999999999999999999998888


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEecc
Q 017336          240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFG  317 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~  317 (373)
                      +.+.+  +.+.+.+.+++ ++|++||++|. +.++.++++|+++ |+++.+|..... ...++... +.+++++.|+...
T Consensus       218 ~~~~~--~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~  292 (343)
T 2eih_A          218 YTHPD--WPKEVRRLTGGKGADKVVDHTGA-LYFEGVIKATANG-GRIAIAGASSGY-EGTLPFAHVFYRQLSILGSTMA  292 (343)
T ss_dssp             TTSTT--HHHHHHHHTTTTCEEEEEESSCS-SSHHHHHHHEEEE-EEEEESSCCCSC-CCCCCTTHHHHTTCEEEECCSC
T ss_pred             CCccc--HHHHHHHHhCCCCceEEEECCCH-HHHHHHHHhhccC-CEEEEEecCCCC-cCccCHHHHHhCCcEEEEecCc
Confidence            77654  78888888876 89999999994 8899999999997 999999986533 11233333 3488999987532


Q ss_pred             CCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          318 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                         ..++++++++++.++++.  ++++++|+|+++++|++.+.+++. +|+++++
T Consensus       293 ---~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          293 ---SKSRLFPILRFVEEGKLK--PVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             ---CGGGHHHHHHHHHHTSSC--CCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             ---cHHHHHHHHHHHHcCCCC--CceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence               245799999999999875  568899999999999999988764 6999875

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.4e-55  Score=408.61  Aligned_cols=339  Identities=25%  Similarity=0.410  Sum_probs=291.2

Q ss_pred             CcccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCC
Q 017336            1 MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDL   79 (373)
Q Consensus         1 m~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~   79 (373)
                      |.+|||+++.+++.++++++++.|+|+++||+|||.++|||++|++.+.|.++ ...+|.++|||++|+|+++|+++++|
T Consensus         3 p~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~   82 (347)
T 2hcy_A            3 PETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGW   82 (347)
T ss_dssp             CSEEEEEEESSTTCCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTTCCSC
T ss_pred             CcccEEEEEeCCCCCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCCCCCC
Confidence            45799999999886799999999999999999999999999999999888655 24679999999999999999999999


Q ss_pred             CCCCEEeecCcC-CCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336           80 EVGDHVLPVFTG-ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  158 (373)
Q Consensus        80 ~~Gd~V~~~~~~-~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p  158 (373)
                      ++||||++.+.. .|+.|.+|++|++++|++....   |..                   ..|+|+||+.++++.++++|
T Consensus        83 ~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~iP  140 (347)
T 2hcy_A           83 KIGDYAGIKWLNGSCMACEYCELGNESNCPHADLS---GYT-------------------HDGSFQQYATADAVQAAHIP  140 (347)
T ss_dssp             CTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEB---TTT-------------------BCCSSBSEEEEETTTSEEEC
T ss_pred             cCCCEEEEecCCCCCCCChhhhCCCcccCcccccc---ccC-------------------CCCcceeEEEeccccEEECC
Confidence            999999987654 5999999999999999876533   321                   23699999999999999999


Q ss_pred             CCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee
Q 017336          159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF  237 (373)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v  237 (373)
                      +++++++||++++++.|||+++. ..+++++++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|++.+
T Consensus       141 ~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~~~  218 (347)
T 2hcy_A          141 QGTDLAQVAPILCAGITVYKALK-SANLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVF  218 (347)
T ss_dssp             TTCCHHHHGGGGTHHHHHHHHHH-TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTCCEE
T ss_pred             CCCCHHHHHHHhhhHHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCceE
Confidence            99999999999999999999865 458999999999998 8999999999999999 89999999999999999999988


Q ss_pred             ecCCC-CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEe
Q 017336          238 VNTSE-HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTF  315 (373)
Q Consensus       238 i~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~  315 (373)
                      +|+.+ .+  +.+.+++.+.+++|++||++|....++.++++|+++ |+++.+|.... ....++...+ .+++++.|+.
T Consensus       219 ~d~~~~~~--~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~i~g~~  294 (347)
T 2hcy_A          219 IDFTKEKD--IVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRAN-GTTVLVGMPAG-AKCCSDVFNQVVKSISIVGSY  294 (347)
T ss_dssp             EETTTCSC--HHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEE-EEEEECCCCTT-CEEEEEHHHHHHTTCEEEECC
T ss_pred             EecCccHh--HHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEeCCCC-CCCCCCHHHHhhCCcEEEEcc
Confidence            88763 33  777888777668999999999878899999999997 99999998653 2333443333 4899999876


Q ss_pred             ccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC-ceeEEEecCC
Q 017336          316 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-GLRCIISMED  373 (373)
Q Consensus       316 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~-~~k~v~~~~~  373 (373)
                      ...   .++++++++++.++++.+.   +++|+|+++++|++.+.+++ .+|+++++++
T Consensus       295 ~~~---~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  347 (347)
T 2hcy_A          295 VGN---RADTREALDFFARGLVKSP---IKVVGLSTLPEIYEKMEKGQIVGRYVVDTSK  347 (347)
T ss_dssp             CCC---HHHHHHHHHHHHTTSCCCC---EEEEEGGGHHHHHHHHHTTCCSSEEEEESCC
T ss_pred             CCC---HHHHHHHHHHHHhCCCccc---eEEEcHHHHHHHHHHHHcCCcceeEEEecCC
Confidence            432   2468899999999988653   57999999999999998887 4699998753

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=2.2e-55  Score=419.12  Aligned_cols=335  Identities=22%  Similarity=0.326  Sum_probs=285.2

Q ss_pred             cchhhhccCCCCeEEEEeecCC-CCCCeEEEEEeeeecCcccccccccCC------C-CCCCCccccccceEEEEEeCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAP-PQAMEVRIKIKYTSLCRTDLYFWESKG------Q-TPLFPRIFGHEAAGVVESVGEG   75 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~~------~-~~~~p~i~G~e~~G~V~~vG~~   75 (373)
                      |++.+++..+. +++++++.|+ |+++||||||.+++||++|++.+.|..      + ...+|.++|||++|+|+++|++
T Consensus        31 m~a~~~~~~~~-l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG~~  109 (404)
T 3ip1_A           31 WLGSKVWRYPE-VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPE  109 (404)
T ss_dssp             SCGGGTEEEEE-EEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEECTT
T ss_pred             cceEEEEeCCc-eEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEECCC
Confidence            34444444443 7889999999 999999999999999999999887632      1 2468999999999999999999


Q ss_pred             C------CCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEE
Q 017336           76 V------SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVV  149 (373)
Q Consensus        76 v------~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v  149 (373)
                      |      +.|++||||++.+..+|+.|.+|++|+++.|++....   |+.                   ..|+|+||+.+
T Consensus       110 v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~---g~~-------------------~~G~~aey~~v  167 (404)
T 3ip1_A          110 AINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNEL---GFN-------------------VDGAFAEYVKV  167 (404)
T ss_dssp             CEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEB---TTT-------------------BCCSSBSEEEE
T ss_pred             ccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCcccccc---CCC-------------------CCCCCcceEEe
Confidence            9      8899999999999999999999999999999986644   322                   23699999999


Q ss_pred             ecCceEeCCCCCC------chhhhhcccchhhhhhhhhhc-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          150 HSGCVAKINPLAP------LDKVCILSCGVSTGLGATLNV-AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       150 ~~~~~~~~p~~~~------~~~aa~~~~~~~ta~~~l~~~-~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      +++.++++|++++      +.++|+++.+++|||+++... ++++++++|||+|+|++|++++|+|+.+|+.+|++++++
T Consensus       168 ~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~  247 (404)
T 3ip1_A          168 DAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPS  247 (404)
T ss_dssp             EGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred             chHHeEeccccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            9999999999886      455888888999999997655 489999999999999999999999999999889999999


Q ss_pred             hhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCC-CccEEEEccCCh-HhHHHHHHHh----hcCCcEEEEEcCCCCCc
Q 017336          223 SKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI-DNMISAFECV----HDGWGVAVLVGVPSKDA  296 (373)
Q Consensus       223 ~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~-~~~~~~~~~l----~~~~g~~v~~g~~~~~~  296 (373)
                      ++|+++++++|++.++++.+.+  +.+.+++.+++ ++|+|||++|++ ..+..+.++|    +++ |+++.+|......
T Consensus       248 ~~~~~~~~~lGa~~vi~~~~~~--~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~-G~iv~~G~~~~~~  324 (404)
T 3ip1_A          248 EVRRNLAKELGADHVIDPTKEN--FVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGIN-ATVAIVARADAKI  324 (404)
T ss_dssp             HHHHHHHHHHTCSEEECTTTSC--HHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCC-CEEEECSCCCSCE
T ss_pred             HHHHHHHHHcCCCEEEcCCCCC--HHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCC-cEEEEeCCCCCCC
Confidence            9999999999999999987766  89999999988 999999999996 3677788888    997 9999999876544


Q ss_pred             eeeccchhh-cccceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEecC
Q 017336          297 VFMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME  372 (373)
Q Consensus       297 ~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~~  372 (373)
                        .++...+ .+++++.|+...  ...+++.++++++.+| +.+.++++++|+|+++++|++.+.   .+|++|+++
T Consensus       325 --~~~~~~~~~~~~~i~g~~~~--~~~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~---~GKvvl~~~  393 (404)
T 3ip1_A          325 --PLTGEVFQVRRAQIVGSQGH--SGHGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ---TDKSLVKVT  393 (404)
T ss_dssp             --EECHHHHHHTTCEEEECCCC--CSTTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT---TCTTCSCEE
T ss_pred             --cccHHHHhccceEEEEecCC--CchHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh---CCcEEEecC
Confidence              3333333 489999987642  2245799999999999 988888999999999999999888   447777663

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=5.8e-55  Score=408.84  Aligned_cols=335  Identities=23%  Similarity=0.344  Sum_probs=291.2

Q ss_pred             cchhhhccC-CCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            4 TAAAVAWEA-GKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         4 ~~a~~~~~~-~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      |||+++... ++.++++++|+|+|+|+||||||.++|||++|+++++|.++ .++|.++|||++|+|+++|++|+.|++|
T Consensus         1 MKA~v~~~~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~-~~~p~i~GhE~aG~V~~vG~~V~~~~~G   79 (348)
T 4eez_A            1 MKAAVVRHNPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFG-NKAGTVLGHEGIGIVKEIGADVSSLQVG   79 (348)
T ss_dssp             CEEEEECSSCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTC-CCTTCBCCSEEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEEcCCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCC-CCCCcccceeEEEEEEEECceeeecccC
Confidence            799887653 34599999999999999999999999999999999998765 4679999999999999999999999999


Q ss_pred             CEEeecCcC-CCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336           83 DHVLPVFTG-ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  161 (373)
Q Consensus        83 d~V~~~~~~-~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~  161 (373)
                      |||++.+.. .|+.|.+|..+.++.|.+....   |.                   ...|+|+||+.++++.++++|+++
T Consensus        80 drV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~-------------------~~~G~~ae~~~~~~~~~~~iP~~~  137 (348)
T 4eez_A           80 DRVSVAWFFEGCGHCEYCVSGNETFCREVKNA---GY-------------------SVDGGMAEEAIVVADYAVKVPDGL  137 (348)
T ss_dssp             CEEEEESEEECCSSSHHHHTTCGGGCTTCEEB---TT-------------------TBCCSSBSEEEEEGGGSCBCCTTS
T ss_pred             CeEeecccccccCccccccCCccccccccccc---cc-------------------ccCCcceeeccccccceeecCCCC
Confidence            999887665 4678999999999999876644   21                   124699999999999999999999


Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  241 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~  241 (373)
                      ++++|++++++++|||+++ +.++++++++|||+|+|++|.+++|+|+.++..+|++++++++|+++++++|++.++++.
T Consensus       138 ~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~  216 (348)
T 4eez_A          138 DPIEASSITCAGVTTYKAI-KVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSG  216 (348)
T ss_dssp             CHHHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-
T ss_pred             CHHHHhhcccceeeEEeee-cccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCC
Confidence            9999999999999999975 678899999999999999999999999987545999999999999999999999999998


Q ss_pred             CCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCC
Q 017336          242 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK  320 (373)
Q Consensus       242 ~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  320 (373)
                      +.+  +.+.+++.+++ ++|+++++++++..+..++++++++ |+++.+|.......++.. ..+.+++++.|+..+.  
T Consensus       217 ~~~--~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~i~gs~~~~--  290 (348)
T 4eez_A          217 DVN--PVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPM-GKMVAVAVPNTEMTLSVP-TVVFDGVEVAGSLVGT--  290 (348)
T ss_dssp             CCC--HHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEE-EEEEECCCCSCEEEECHH-HHHHSCCEEEECCSCC--
T ss_pred             CCC--HHHHhhhhcCCCCceEEEEeccCcchhheeheeecCC-ceEEEEeccCCCCccCHH-HHHhCCeEEEEEecCC--
Confidence            876  88999999988 9999999999989999999999997 999999986543333322 2244899999987544  


Q ss_pred             CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336          321 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       321 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                       +++++++++++++|++++   ++++|||+++++|++.+++++. +|+||+|+
T Consensus       291 -~~~~~~~~~l~~~g~i~p---~~~~~~l~~~~~A~~~l~~g~~~GKvVl~~s  339 (348)
T 4eez_A          291 -RLDLAEAFQFGAEGKVKP---IVATRKLEEINDIIDEMKAGKIEGRMVIDFT  339 (348)
T ss_dssp             -HHHHHHHHHHHHTTSCCC---CEEEECGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             -HHHHHHHHHHHHcCCCEE---EEEEEeHHHHHHHHHHHHCCCCccEEEEEcc
Confidence             346899999999998853   4589999999999999999885 59999985

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=1.3e-55  Score=420.10  Aligned_cols=344  Identities=21%  Similarity=0.284  Sum_probs=289.9

Q ss_pred             ccchhhhccCCCCeEEEEeecCCC-CC-----CeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCC
Q 017336            3 STAAAVAWEAGKPLIIQDVEVAPP-QA-----MEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV   76 (373)
Q Consensus         3 ~~~a~~~~~~~~~~~~~~~~~p~~-~~-----~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v   76 (373)
                      +|||+++.+++. +++++++.|+| ++     +||+|||.++|||++|++.+.|.. ...+|.++|||++|+|+++|++|
T Consensus         2 ~MkA~~~~~~~~-l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~-~~~~p~v~GhE~~G~V~~vG~~v   79 (398)
T 2dph_A            2 GNKSVVYHGTRD-LRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRF-IVPKGHVLGHEITGEVVEKGSDV   79 (398)
T ss_dssp             CEEEEEEEETTE-EEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSS-CCCTTCBCCCCEEEEEEEECTTC
T ss_pred             ccEEEEEEcCCC-EEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCC-CCCCCcccCCceEEEEEEECCCC
Confidence            699999998765 99999999998 68     999999999999999999998864 34679999999999999999999


Q ss_pred             CCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccC-----cccccccCCCcccccCCCccccccCCcceeeEEEEec
Q 017336           77 SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINP-----VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS  151 (373)
Q Consensus        77 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~-----~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~  151 (373)
                      ++|++||||++.+..+|+.|.+|++|+++.|++....+     ..|+.       +         ....|+|+||+++++
T Consensus        80 ~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~-------~---------~~~~G~~aey~~v~~  143 (398)
T 2dph_A           80 ELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFD-------L---------KGWSGGQAEYVLVPY  143 (398)
T ss_dssp             CSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTT-------B---------SSCCCSSBSEEEESS
T ss_pred             CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccc-------c---------CCCCceeeeeEEecc
Confidence            99999999999999999999999999999998621110     01110       0         012379999999998


Q ss_pred             C--ceEeCCCCCCchh----hhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhH
Q 017336          152 G--CVAKINPLAPLDK----VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR  225 (373)
Q Consensus       152 ~--~~~~~p~~~~~~~----aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~  225 (373)
                      +  .++++|+++++++    ||+++++++|||+++ +.++++++++|||+|+|++|++++|+|+.+|+.+|+++++++++
T Consensus       144 ~~~~~~~iP~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~  222 (398)
T 2dph_A          144 ADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPER  222 (398)
T ss_dssp             HHHHCEECSSHHHHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHH
T ss_pred             ccCeEEECCCCCChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHH
Confidence            7  8999999999988    888999999999997 67899999999999999999999999999999789999999999


Q ss_pred             HHHHHhcCCceeecCCCCCccH-HHHHHHHcCC-CccEEEEccCChH--------------hHHHHHHHhhcCCcEEEEE
Q 017336          226 FEEAKKFGVTDFVNTSEHDRPI-QEVIAEMTNG-GVDRSVECTGNID--------------NMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       226 ~~~~~~lg~~~vi~~~~~~~~~-~~~~~~~~~~-~~d~vid~~g~~~--------------~~~~~~~~l~~~~g~~v~~  289 (373)
                      +++++++|++ ++++.+.+  + .+.+++.+++ ++|+|||++|+..              .++.++++|+++ |+++.+
T Consensus       223 ~~~a~~lGa~-~i~~~~~~--~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-G~iv~~  298 (398)
T 2dph_A          223 LKLLSDAGFE-TIDLRNSA--PLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAG-GAIGIP  298 (398)
T ss_dssp             HHHHHTTTCE-EEETTSSS--CHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEE-EEEECC
T ss_pred             HHHHHHcCCc-EEcCCCcc--hHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcC-CEEEEe
Confidence            9999999996 78876554  4 7788888887 8999999999742              689999999997 999999


Q ss_pred             cCCCC-----------Cceeeccchh-hcccceEEEEeccCCCCCCCHHHHHHHHHcCCCC--CCCceeeeeccccHHHH
Q 017336          290 GVPSK-----------DAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE--LEKFITHRIPFSEINKA  355 (373)
Q Consensus       290 g~~~~-----------~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~l~~~~~a  355 (373)
                      |....           .....++... +.+++++.++...   ..+.+.++++++.+|+++  +.++++++|+|+++++|
T Consensus       299 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~---~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A  375 (398)
T 2dph_A          299 GIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAP---VTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDG  375 (398)
T ss_dssp             SCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCC---GGGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHH
T ss_pred             ccccccccccccccccCCcccccHHHHhhcCCEEEEeccC---cHHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHH
Confidence            97621           1122333333 3488888876432   235689999999999998  76678999999999999


Q ss_pred             HHHHHcCCceeEEEecC
Q 017336          356 FEYMVKGEGLRCIISME  372 (373)
Q Consensus       356 ~~~l~~~~~~k~v~~~~  372 (373)
                      ++.+.+++.+|++|+++
T Consensus       376 ~~~~~~~~~gKvvv~~~  392 (398)
T 2dph_A          376 YAKFDKGSPAKFVIDPH  392 (398)
T ss_dssp             HHHHHTTCSCEEEECTT
T ss_pred             HHHHhcCCceEEEEecC
Confidence            99998877789999874

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=8.9e-56  Score=415.85  Aligned_cols=336  Identities=22%  Similarity=0.323  Sum_probs=283.8

Q ss_pred             ccchhhhccCCCCeEEEE--eecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCC-CC
Q 017336            3 STAAAVAWEAGKPLIIQD--VEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVS-DL   79 (373)
Q Consensus         3 ~~~a~~~~~~~~~~~~~~--~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~-~~   79 (373)
                      +|||+++.+++.++++++  +|.|+|+++||||||.+++||++|++.+.|.++...+|.++|||++|+|+++|++++ .|
T Consensus         6 ~mka~~~~~~~~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~   85 (360)
T 1piw_A            6 KFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGL   85 (360)
T ss_dssp             CEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTCCSSC
T ss_pred             heEEEEEecCCCCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCCCCCCcccCcCceEEEEEeCCCCCCCC
Confidence            599999999887799999  999999999999999999999999999988766567899999999999999999999 99


Q ss_pred             CCCCEEeec-CcCCCCCCccccCCCcCcCccc--cccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEe
Q 017336           80 EVGDHVLPV-FTGECGDCRHCRSDVSNMCDLL--RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK  156 (373)
Q Consensus        80 ~~Gd~V~~~-~~~~~~~~~~c~~~~~~~~~~~--~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~  156 (373)
                      ++||||++. +..+|+.|.+|++|+++.|++.  .+.   +.. ..|             ....|+|+||++++++.+++
T Consensus        86 ~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~---~~~-~~g-------------~~~~G~~aey~~v~~~~~~~  148 (360)
T 1piw_A           86 KVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYS---QPY-EDG-------------YVSQGGYANYVRVHEHFVVP  148 (360)
T ss_dssp             CTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSS---CBC-TTS-------------CBCCCSSBSEEEEEGGGEEE
T ss_pred             CCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccc---ccc-CCC-------------ccCCCcceeEEEEchhheEE
Confidence            999999654 4578999999999999999875  111   000 000             01236999999999999999


Q ss_pred             CCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce
Q 017336          157 INPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  236 (373)
Q Consensus       157 ~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~  236 (373)
                      +|+++++++||++++++.|||+++.. ++++++++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++.
T Consensus       149 iP~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~lGa~~  226 (360)
T 1piw_A          149 IPENIPSHLAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADH  226 (360)
T ss_dssp             CCTTSCHHHHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSE
T ss_pred             CCCCCCHHHhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCCE
Confidence            99999999999999999999999755 899999999999999999999999999999 7999999999999999999999


Q ss_pred             eecCCCC-CccHHHHHHHHcCCCccEEEEccCC--hHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEE
Q 017336          237 FVNTSEH-DRPIQEVIAEMTNGGVDRSVECTGN--IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLK  312 (373)
Q Consensus       237 vi~~~~~-~~~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~  312 (373)
                      ++++.+. +  +.+.+.    +++|+|||++|+  +..++.++++|+++ |+++.+|.... . ..++... +.+++++.
T Consensus       227 v~~~~~~~~--~~~~~~----~~~D~vid~~g~~~~~~~~~~~~~l~~~-G~iv~~g~~~~-~-~~~~~~~~~~~~~~i~  297 (360)
T 1piw_A          227 YIATLEEGD--WGEKYF----DTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQ-H-EMLSLKPYGLKAVSIS  297 (360)
T ss_dssp             EEEGGGTSC--HHHHSC----SCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCS-S-CCEEECGGGCBSCEEE
T ss_pred             EEcCcCchH--HHHHhh----cCCCEEEECCCCCcHHHHHHHHHHhcCC-CEEEEecCCCC-c-cccCHHHHHhCCeEEE
Confidence            9987654 4  544433    489999999998  77888999999997 99999998653 2 0222223 34889999


Q ss_pred             EEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeecccc--HHHHHHHHHcCCc-eeEEEecC
Q 017336          313 GTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSE--INKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       313 g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~--~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                      |+....   .++++++++++.++++.+.  + ++|+|++  +++|++.+.+++. +|+++++.
T Consensus       298 g~~~~~---~~~~~~~~~l~~~g~l~~~--i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~  354 (360)
T 1piw_A          298 YSALGS---IKELNQLLKLVSEKDIKIW--V-ETLPVGEAGVHEAFERMEKGDVRYRFTLVGY  354 (360)
T ss_dssp             ECCCCC---HHHHHHHHHHHHHTTCCCC--E-EEEESSHHHHHHHHHHHHHTCCSSEEEEECC
T ss_pred             EEecCC---HHHHHHHHHHHHhCCCcce--E-EEEeccHhHHHHHHHHHHCCCCceEEEEecC
Confidence            876432   2468999999999987643  5 8999999  9999999988774 69999875

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=9.9e-55  Score=406.83  Aligned_cols=332  Identities=26%  Similarity=0.363  Sum_probs=289.2

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC--------CCCCCccccccceEEEEEeCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ--------TPLFPRIFGHEAAGVVESVGEG   75 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--------~~~~p~i~G~e~~G~V~~vG~~   75 (373)
                      |||+++.+++.+++++++|.|+|+++||+|||.+++||++|++.+.|.++        ...+|.++|||++|+|+++|++
T Consensus         1 Mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   80 (347)
T 1jvb_A            1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (347)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCC
Confidence            79999999887799999999999999999999999999999999887554        3468999999999999999999


Q ss_pred             CCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEec-Cce
Q 017336           76 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS-GCV  154 (373)
Q Consensus        76 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~-~~~  154 (373)
                      ++.|++||||+..+..+|+.|.+|++|++|+|++....   |+.                   ..|+|+||+.+++ +.+
T Consensus        81 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~---G~~-------------------~~G~~aey~~v~~~~~~  138 (347)
T 1jvb_A           81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL---GIN-------------------FDGAYAEYVIVPHYKYM  138 (347)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEB---TTT-------------------BCCSSBSEEEESCGGGE
T ss_pred             CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccc---ccc-------------------CCCcceeEEEecCccce
Confidence            99999999999888899999999999999999876533   321                   2369999999999 999


Q ss_pred             EeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCC-HHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHhc
Q 017336          155 AKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLG-AVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKF  232 (373)
Q Consensus       155 ~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g-~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~~~~l  232 (373)
                      +++ +++++++|+.+++++.|||+++. .++++++++|||+|+| ++|++++|+++.. |+ +|+++++++++++.++++
T Consensus       139 ~~i-~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~  215 (347)
T 1jvb_A          139 YKL-RRLNAVEAAPLTCSGITTYRAVR-KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRA  215 (347)
T ss_dssp             EEC-SSSCHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHH
T ss_pred             EEe-CCCCHHHcccchhhHHHHHHHHH-hcCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHh
Confidence            999 99999999999999999999874 5899999999999985 9999999999999 99 899999999999999999


Q ss_pred             CCceeecCCCCCccHHHHHHHHcC-CCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC-CCceeeccchh-hcccc
Q 017336          233 GVTDFVNTSEHDRPIQEVIAEMTN-GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS-KDAVFMTKPIN-VLNER  309 (373)
Q Consensus       233 g~~~vi~~~~~~~~~~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~-~~~~~~~~~~~-~~~~~  309 (373)
                      |++.++++.+.+  +.+.+.+.+. +++|++||++|++..++.++++|+++ |+++.+|... ..   .++... +.+++
T Consensus       216 g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~~---~~~~~~~~~~~~  289 (347)
T 1jvb_A          216 GADYVINASMQD--PLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGADL---HYHAPLITLSEI  289 (347)
T ss_dssp             TCSEEEETTTSC--HHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSCCCC---CCCHHHHHHHTC
T ss_pred             CCCEEecCCCcc--HHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCCCC---CCCHHHHHhCce
Confidence            999988877654  7777888876 58999999999966899999999997 9999999865 22   333333 34889


Q ss_pred             eEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          310 TLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       310 ~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      ++.|+....   .+++++++++++++++.  ++++++|+|+++++|++.+.+++. +|++|++
T Consensus       290 ~i~g~~~~~---~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          290 QFVGSLVGN---QSDFLGIMRLAEAGKVK--PMITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             EEEECCSCC---HHHHHHHHHHHHTTSSC--CCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             EEEEEeccC---HHHHHHHHHHHHcCCCC--ceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence            999876432   34688999999999874  558899999999999999998874 6999864

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=4.8e-54  Score=404.38  Aligned_cols=332  Identities=21%  Similarity=0.247  Sum_probs=284.8

Q ss_pred             ccchhhhccCC-CCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCCC
Q 017336            3 STAAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         3 ~~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      +|||+++.+++ +.+++++.|.|+|+++||||||.++|||++|++.+.|.++ ...+|.++|||++|+|+++|++++.|+
T Consensus        27 ~mkA~~~~~~~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~  106 (363)
T 3uog_A           27 WMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVTRFR  106 (363)
T ss_dssp             EEEEEEBSCTTTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             hhEEEEEccCCCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEECCCCCCCC
Confidence            49999999764 3599999999999999999999999999999999998765 367899999999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCc-ccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV-RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP  159 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~  159 (373)
                      +||||++.+..      .|+.|. +.|.+...... .|.                   ...|+|+||+.++++.++++|+
T Consensus       107 vGDrV~~~~~~------~c~~g~-~~c~~~~~~~~~~g~-------------------~~~G~~aey~~v~~~~~~~iP~  160 (363)
T 3uog_A          107 PGDRVISTFAP------GWLDGL-RPGTGRTPAYETLGG-------------------AHPGVLSEYVVLPEGWFVAAPK  160 (363)
T ss_dssp             TTCEEEECSST------TCCSSS-CCSCSSCCCCCCTTT-------------------TSCCCCBSEEEEEGGGEEECCT
T ss_pred             CCCEEEEeccc------cccccc-cccccccccccccCc-------------------CCCCcceeEEEechHHeEECCC
Confidence            99999987643      677788 88874211100 111                   1236999999999999999999


Q ss_pred             CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      ++++++||+++++++|||+++.+.++++++++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++.+++
T Consensus       161 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~  239 (363)
T 3uog_A          161 SLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGIN  239 (363)
T ss_dssp             TSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEE
T ss_pred             CCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCCCEEEc
Confidence            999999999999999999998788999999999999999999999999999999 8999999999999999999999998


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEecc
Q 017336          240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFG  317 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~  317 (373)
                      .+..+  +.+.+++.+++ ++|+||||+|+ +.+..++++|+++ |+++.+|..... ...++... +.+++++.|+..+
T Consensus       240 ~~~~~--~~~~v~~~~~g~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~  314 (363)
T 3uog_A          240 RLEED--WVERVYALTGDRGADHILEIAGG-AGLGQSLKAVAPD-GRISVIGVLEGF-EVSGPVGPLLLKSPVVQGISVG  314 (363)
T ss_dssp             TTTSC--HHHHHHHHHTTCCEEEEEEETTS-SCHHHHHHHEEEE-EEEEEECCCSSC-EECCBTTHHHHTCCEEEECCCC
T ss_pred             CCccc--HHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhhcC-CEEEEEecCCCc-ccCcCHHHHHhCCcEEEEEecC
Confidence            44344  88999999988 99999999996 8899999999997 999999987632 23333333 3489999998754


Q ss_pred             CCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336          318 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  371 (373)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~  371 (373)
                      .   .++++++++++.++++  +++++++|+|+++++|++.+.+++.+|++|++
T Consensus       315 ~---~~~~~~~~~l~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~  363 (363)
T 3uog_A          315 H---RRALEDLVGAVDRLGL--KPVIDMRYKFTEVPEALAHLDRGPFGKVVIEF  363 (363)
T ss_dssp             C---HHHHHHHHHHHHHHTC--CCCEEEEEEGGGHHHHHHTGGGCCSBEEEEEC
T ss_pred             C---HHHHHHHHHHHHcCCC--ccceeeEEcHHHHHHHHHHHHcCCCccEEEeC
Confidence            3   3468999999999976  45689999999999999999988866999875

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.6e-55  Score=411.72  Aligned_cols=341  Identities=25%  Similarity=0.370  Sum_probs=280.1

Q ss_pred             cccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 017336            2 SSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   81 (373)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   81 (373)
                      ++|||+.+.+++++++++++|.|+|+++||+|||.++|||++|++.+.|.++...+|.++|||++|+|+++|++|+.|++
T Consensus        21 ~~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~~v  100 (369)
T 1uuf_A           21 LKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAP  100 (369)
T ss_dssp             --CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             ceEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCCCCCCeecccCceEEEEEECCCCCCCCC
Confidence            47899998887777999999999999999999999999999999999887655568999999999999999999999999


Q ss_pred             CCEEeecCcC-CCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           82 GDHVLPVFTG-ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        82 Gd~V~~~~~~-~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      ||||++.+.. .|+.|.+|++|++|.|++.... +.+.. .       ..|     ....|+|+||+.++++.++++|++
T Consensus       101 GDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~-~~~~~-~-------~~g-----~~~~G~~aeyv~v~~~~~~~~P~~  166 (369)
T 1uuf_A          101 GDLVGVGCIVDSCKHCEECEDGLENYCDHMTGT-YNSPT-P-------DEP-----GHTLGGYSQQIVVHERYVLRIRHP  166 (369)
T ss_dssp             TCEEEECSEEECCSSSHHHHTTCGGGCTTCEET-TTSBC-S-------STT-----SBCCCSSBSEEEEEGGGCEECCSC
T ss_pred             CCEEEEccCCCCCCCCcccCCCCcccCcchhcc-ccccc-c-------cCC-----CCCCCcccceEEEcchhEEECCCC
Confidence            9999987764 6999999999999999875211 00000 0       000     012369999999999999999999


Q ss_pred             -CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          161 -APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       161 -~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                       +++++||++++++.|||+++.+ ++++++++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++.+++
T Consensus       167 ~ls~~~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~lGa~~vi~  244 (369)
T 1uuf_A          167 QEQLAAVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVN  244 (369)
T ss_dssp             GGGHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEE
T ss_pred             CCCHHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEec
Confidence             9999999999999999998754 689999999999999999999999999999 7999999999999999999999998


Q ss_pred             CCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccC
Q 017336          240 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGN  318 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~  318 (373)
                      +.+.+  +.   .+.. +++|+|||++|++..++.++++|+++ |+++.+|...... ..++... +.+++++.|+..+.
T Consensus       245 ~~~~~--~~---~~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~-~~~~~~~~~~~~~~i~g~~~~~  316 (369)
T 1uuf_A          245 SRNAD--EM---AAHL-KSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPATPH-KSPEVFNLIMKRRAIAGSMIGG  316 (369)
T ss_dssp             TTCHH--HH---HTTT-TCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC--------CHHHHHTTTCEEEECCSCC
T ss_pred             cccHH--HH---HHhh-cCCCEEEECCCCHHHHHHHHHHhccC-CEEEEeccCCCCc-cccCHHHHHhCCcEEEEeecCC
Confidence            76532  32   2333 48999999999866889999999997 9999999865322 1233333 34889999876433


Q ss_pred             CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336          319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                         .++++++++++.++++.+.  + ++|+|+++++|++.+.+++. +|++++++
T Consensus       317 ---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~  365 (369)
T 1uuf_A          317 ---IPETQEMLDFCAEHGIVAD--I-EMIRADQINEAYERMLRGDVKYRFVIDNR  365 (369)
T ss_dssp             ---HHHHHHHHHHHHHHTCCCC--E-EEECGGGHHHHHHHHHTTCSSSEEEEEGG
T ss_pred             ---HHHHHHHHHHHHhCCCCcc--e-EEEcHHHHHHHHHHHHcCCCceEEEEecC
Confidence               2468899999999987653  4 57999999999999988874 69999875

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=7.3e-56  Score=415.97  Aligned_cols=333  Identities=20%  Similarity=0.254  Sum_probs=283.6

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCC---CccccccceEEEEEeCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF---PRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~---p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |||+++.+++++++++++|.|+|+++||||||.++|||++|++.+.|.++...+   |.++|||++| |+++|++ +.|+
T Consensus         1 MkA~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G-V~~vG~~-~~~~   78 (357)
T 2b5w_A            1 MKAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVG-VVVDPND-TELE   78 (357)
T ss_dssp             CEEEEEETTCSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTTSCTTCSEEECCSEEEE-EEEECTT-SSCC
T ss_pred             CeEEEEeCCCCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCCCCCCCCCcccCceeEE-EEEECCC-CCCC
Confidence            799999998877999999999999999999999999999999999886654556   8999999999 9999999 9999


Q ss_pred             CCCEEeecCcCC--CCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336           81 VGDHVLPVFTGE--CGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  158 (373)
Q Consensus        81 ~Gd~V~~~~~~~--~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p  158 (373)
                      +||||++.+..+  |+.|++|++|+++.|++..... .|+.                  ...|+|+||++++++.++++|
T Consensus        79 vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~-~g~~------------------~~~G~~aey~~v~~~~~~~iP  139 (357)
T 2b5w_A           79 EGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFE-RGIV------------------GAHGYMSEFFTSPEKYLVRIP  139 (357)
T ss_dssp             TTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEE-ETTB------------------EECCSCBSEEEEEGGGEEECC
T ss_pred             CCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccc-cCcc------------------CCCcceeeEEEEchHHeEECC
Confidence            999999998888  9999999999999998754320 0110                  013699999999999999999


Q ss_pred             CCCCchhhhhcccchhhhhhhhhhccCCCCC------CEEEEECCCHHHHHH-HHHH-HHcCCcEEEEEcCChh---HHH
Q 017336          159 PLAPLDKVCILSCGVSTGLGATLNVAKPERG------SSVAVFGLGAVGLAA-AEGA-RIAGASRIIGVDRSSK---RFE  227 (373)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~------~~vlI~G~g~~G~~a-i~la-~~~g~~~V~~~~~~~~---~~~  227 (373)
                      ++++ ++ |+++.+++|||+++ +.++++++      ++|||+|+|++|+++ +|+| +.+|+++|++++++++   |++
T Consensus       140 ~~~~-~~-aal~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~  216 (357)
T 2b5w_A          140 RSQA-EL-GFLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTID  216 (357)
T ss_dssp             GGGS-TT-GGGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHH
T ss_pred             CCcc-hh-hhhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHH
Confidence            9999 54 55778999999997 67889999      999999999999999 9999 9999955999999998   999


Q ss_pred             HHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh--
Q 017336          228 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV--  305 (373)
Q Consensus       228 ~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~--  305 (373)
                      +++++|++++ ++.+.+  +.+ +++. .+++|+|||++|++..++.++++++++ |+++.+|.... ....++...+  
T Consensus       217 ~~~~lGa~~v-~~~~~~--~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~  289 (357)
T 2b5w_A          217 IIEELDATYV-DSRQTP--VED-VPDV-YEQMDFIYEATGFPKHAIQSVQALAPN-GVGALLGVPSD-WAFEVDAGAFHR  289 (357)
T ss_dssp             HHHHTTCEEE-ETTTSC--GGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCCC-CCCCCCHHHHHH
T ss_pred             HHHHcCCccc-CCCccC--HHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEeCCCC-CCceecHHHHhH
Confidence            9999999998 877655  666 7776 558999999999977899999999997 99999998652 2233333333  


Q ss_pred             ---cccceEEEEeccCCCCCCCHHHHHHHHHcC--CCCCCCceeeeeccccHHHHHHHHHcCCceeEEEecCC
Q 017336          306 ---LNERTLKGTFFGNYKPRTDLPSVVDMYMNK--QLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED  373 (373)
Q Consensus       306 ---~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~~~  373 (373)
                         .+++++.|+..+.   .++++++++++.++  ++ +.++++++|+|+++++|++.+  +..+|+++++.|
T Consensus       290 ~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~~~~-~~~~i~~~~~l~~~~~A~~~~--~~~gKvvi~~~~  356 (357)
T 2b5w_A          290 EMVLHNKALVGSVNSH---VEHFEAATVTFTKLPKWF-LEDLVTGVHPLSEFEAAFDDD--DTTIKTAIEFST  356 (357)
T ss_dssp             HHHHTTCEEEECCCCC---HHHHHHHHHHHHHSCHHH-HHHHEEEEEEGGGGGGGGCCS--TTCCEEEEECCC
T ss_pred             HHHhCCeEEEEeccCC---HHHHHHHHHHHHhCchhh-hhhhcceeecHHHHHHHHHHh--CCCceEEEEecC
Confidence               5899999876432   34689999999999  86 667789999999999999988  456799998864

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=2.7e-54  Score=405.21  Aligned_cols=341  Identities=24%  Similarity=0.357  Sum_probs=282.7

Q ss_pred             CcccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 017336            1 MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         1 m~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |++|+++++.++++++++.++|.|+|+++||+|||.++|||++|++.+.|.++...+|.++|||++|+|+++|++++.|+
T Consensus         7 ~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~   86 (357)
T 2cf5_A            7 ERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFT   86 (357)
T ss_dssp             CCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTCCCSSBCCCCEEEEEEEEECSSCCSCC
T ss_pred             cceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCCC
Confidence            35678888877767799999999999999999999999999999999988665567899999999999999999999999


Q ss_pred             CCCEEeecCc-CCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC
Q 017336           81 VGDHVLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP  159 (373)
Q Consensus        81 ~Gd~V~~~~~-~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~  159 (373)
                      +||||++.+. .+|+.|.+|++|+++.|++..... .+.. .        .|     ....|+|+||++++++.++++|+
T Consensus        87 vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~-~~~~-~--------~g-----~~~~G~~aey~~v~~~~~~~~P~  151 (357)
T 2cf5_A           87 VGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSY-NDVY-I--------NG-----QPTQGGFAKATVVHQKFVVKIPE  151 (357)
T ss_dssp             TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETT-TSBC-T--------TS-----CBCCCSSBSCEEEEGGGEEECCS
T ss_pred             CCCEEEEcCCCCCCCCChHHhCcCcccCCCccccc-cccc-c--------CC-----CCCCCccccEEEechhhEEECcC
Confidence            9999987554 589999999999999997543221 0100 0        00     11247999999999999999999


Q ss_pred             CCCchhhhhcccchhhhhhhhhhccCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCcee
Q 017336          160 LAPLDKVCILSCGVSTGLGATLNVAKPE-RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDF  237 (373)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~-~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~~v  237 (373)
                      ++++++||++++++.|||+++. ..+++ ++++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++ ++|++.+
T Consensus       152 ~ls~~~aa~l~~~~~ta~~~l~-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~v  229 (357)
T 2cf5_A          152 GMAVEQAAPLLCAGVTVYSPLS-HFGLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGADDY  229 (357)
T ss_dssp             SCCHHHHTGGGTHHHHHHHHHH-HTSTTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCCSCE
T ss_pred             CCCHHHhhhhhhhHHHHHHHHH-hcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCCcee
Confidence            9999999999999999999864 57788 99999999999999999999999999 8999999999999988 9999999


Q ss_pred             ecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEecc
Q 017336          238 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFG  317 (373)
Q Consensus       238 i~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~  317 (373)
                      +++++.     +.+++.++ ++|+|||++|++..++.++++++++ |+++.+|....... .++...+.+++++.|+..+
T Consensus       230 i~~~~~-----~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~-~~~~~~~~~~~~i~g~~~~  301 (357)
T 2cf5_A          230 VIGSDQ-----AKMSELAD-SLDYVIDTVPVHHALEPYLSLLKLD-GKLILMGVINNPLQ-FLTPLLMLGRKVITGSFIG  301 (357)
T ss_dssp             EETTCH-----HHHHHSTT-TEEEEEECCCSCCCSHHHHTTEEEE-EEEEECSCCSSCCC-CCHHHHHHHTCEEEECCSC
T ss_pred             eccccH-----HHHHHhcC-CCCEEEECCCChHHHHHHHHHhccC-CEEEEeCCCCCCcc-ccCHHHHhCccEEEEEccC
Confidence            987642     23455543 7999999999866789999999997 99999998653322 1222234489999987653


Q ss_pred             CCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336          318 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                      .   .++++++++++.++++.+.  + ++|||+++++|++.+.+++. +|++++++
T Consensus       302 ~---~~~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~  351 (357)
T 2cf5_A          302 S---MKETEEMLEFCKEKGLSSI--I-EVVKMDYVNTAFERLEKNDVRYRFVVDVE  351 (357)
T ss_dssp             C---HHHHHHHHHHHHHTTCCCC--E-EEEEGGGHHHHHHHHHTTCSSSEEEEETT
T ss_pred             C---HHHHHHHHHHHHcCCCCCc--e-EEEeHHHHHHHHHHHHCCCCceEEEEeCC
Confidence            2   2468899999999988653  4 79999999999999988874 59999875

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.2e-54  Score=413.75  Aligned_cols=347  Identities=23%  Similarity=0.281  Sum_probs=285.7

Q ss_pred             cccchhhhccCCCCeEEEEeecCCCC-CCe------EEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCC
Q 017336            2 SSTAAAVAWEAGKPLIIQDVEVAPPQ-AME------VRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGE   74 (373)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~p~~~-~~e------vlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~   74 (373)
                      ++|||+++.+++. ++++++|.|+|+ ++|      |||||.+++||++|++.+.|.++ ..+|.++|||++|+|+++|+
T Consensus         1 ~~Mka~~~~~~~~-l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~p~v~GhE~~G~V~~vG~   78 (398)
T 1kol_A            1 SGNRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGR   78 (398)
T ss_dssp             -CEEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECT
T ss_pred             CccEEEEEecCCc-eEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC-CCCCcccCcccEEEEEEECC
Confidence            4799999988765 999999999997 898      99999999999999999988543 45789999999999999999


Q ss_pred             CCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCc---ccccccCCCcccccCCCccccccCCcceeeEEEEec
Q 017336           75 GVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV---RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS  151 (373)
Q Consensus        75 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~---~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~  151 (373)
                      +|+.|++||||++.+..+|+.|++|++|++++|++......   .|+..         .      ....|+|+||+++++
T Consensus        79 ~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~---------~------~~~~G~~aey~~v~~  143 (398)
T 1kol_A           79 DVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVD---------M------GDWTGGQAEYVLVPY  143 (398)
T ss_dssp             TCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTT---------S------CCBCCCSBSEEEESS
T ss_pred             CCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeecc---------C------CCCCceeeeEEEecc
Confidence            99999999999999999999999999999999987542110   01100         0      011369999999998


Q ss_pred             C--ceEeCCCCCCchh----hhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhH
Q 017336          152 G--CVAKINPLAPLDK----VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR  225 (373)
Q Consensus       152 ~--~~~~~p~~~~~~~----aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~  225 (373)
                      .  .++++|+++++++    +++++++++|||+++. .++++++++|||+|+|++|++++|+|+.+|+++|++++++++|
T Consensus       144 ~~~~~~~~P~~~~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~  222 (398)
T 1kol_A          144 ADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPAR  222 (398)
T ss_dssp             HHHHCEECSCHHHHHHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHH
T ss_pred             hhCeEEECCCCcchhhhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHH
Confidence            6  8999999999887    7888989999999974 7899999999999999999999999999999789999999999


Q ss_pred             HHHHHhcCCceeecCCCCCccHHHHHHHHcCC-CccEEEEccCCh---------------HhHHHHHHHhhcCCcEEEEE
Q 017336          226 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI---------------DNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       226 ~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~---------------~~~~~~~~~l~~~~g~~v~~  289 (373)
                      +++++++|++ ++++.+.+ .+.+.+++.+++ ++|+|||++|++               ..++.++++|+++ |+++.+
T Consensus       223 ~~~a~~lGa~-~i~~~~~~-~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~  299 (398)
T 1kol_A          223 LAHAKAQGFE-IADLSLDT-PLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIP  299 (398)
T ss_dssp             HHHHHHTTCE-EEETTSSS-CHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEEC
T ss_pred             HHHHHHcCCc-EEccCCcc-hHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcC-CEEEEe
Confidence            9999999997 77765432 277888888887 899999999984               2688999999997 999999


Q ss_pred             cCCC-CCc----------eeeccchh-hcccceEEEEeccCCCCCCCHHHHHHHHHcCCCC-CCCceeeeeccccHHHHH
Q 017336          290 GVPS-KDA----------VFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE-LEKFITHRIPFSEINKAF  356 (373)
Q Consensus       290 g~~~-~~~----------~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~l~~~~~a~  356 (373)
                      |... ...          .+.+.... +.+++++.++...   ..+.+.++++++.+|+++ ..++++++|+|+++++|+
T Consensus       300 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~  376 (398)
T 1kol_A          300 GLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTP---VMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGY  376 (398)
T ss_dssp             SCCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCC---HHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHH
T ss_pred             ccccCCcccccccccccccccccHHHHhhcccEEEecccC---hHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHH
Confidence            9752 111          12222222 3478888875321   123578899999999887 345678999999999999


Q ss_pred             HHHHcCCceeEEEecC
Q 017336          357 EYMVKGEGLRCIISME  372 (373)
Q Consensus       357 ~~l~~~~~~k~v~~~~  372 (373)
                      +.+.+++.+|++|+++
T Consensus       377 ~~~~~~~~gKvvi~~~  392 (398)
T 1kol_A          377 GEFDAGVPKKFVIDPH  392 (398)
T ss_dssp             HHHHHTCSCEEEECTT
T ss_pred             HHHhCCCceEEEEEeC
Confidence            9998877789999874

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=4.8e-53  Score=397.84  Aligned_cols=338  Identities=22%  Similarity=0.382  Sum_probs=278.2

Q ss_pred             ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      +|+++.....++.+++.+++.|+|+++||+|||.++|||++|++.+.|.++...+|.++|||++|+|+++|++|+.|++|
T Consensus        16 k~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~~vG   95 (366)
T 1yqd_A           16 KAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTEVGSKVKKVNVG   95 (366)
T ss_dssp             EEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSCCCSSBCCCCCEEEEEEEECTTCCSCCTT
T ss_pred             eEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCCCCCCEecccceEEEEEEECCCCCcCCCC
Confidence            44455555555569999999999999999999999999999999998876556789999999999999999999999999


Q ss_pred             CEEeecCc-CCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336           83 DHVLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  161 (373)
Q Consensus        83 d~V~~~~~-~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~  161 (373)
                      |||++.+. .+|+.|.+|++|+++.|.+.... +.|.. ..|             ....|+|+||+.++++.++++|+++
T Consensus        96 DrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~-~~~~~-~~g-------------~~~~G~~aey~~v~~~~~~~~P~~l  160 (366)
T 1yqd_A           96 DKVGVGCLVGACHSCESCANDLENYCPKMILT-YASIY-HDG-------------TITYGGYSNHMVANERYIIRFPDNM  160 (366)
T ss_dssp             CEEEECSEEECCSSSHHHHTTCGGGCTTCEES-SSSBC-TTS-------------CBCCCSSBSEEEEEGGGCEECCTTS
T ss_pred             CEEEEcCCcCCCCCChhhhCcCcccCCccccc-ccccc-cCC-------------CcCCCccccEEEEchhhEEECCCCC
Confidence            99987654 58999999999999999654322 11110 000             1124799999999999999999999


Q ss_pred             CchhhhhcccchhhhhhhhhhccCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCceeec
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPE-RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVN  239 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~-~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~~vi~  239 (373)
                      ++++||++++++.|||+++. ..+++ ++++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++ ++|++.+++
T Consensus       161 s~~~aa~l~~~~~ta~~al~-~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~v~~  238 (366)
T 1yqd_A          161 PLDGGAPLLCAGITVYSPLK-YFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNFGADSFLV  238 (366)
T ss_dssp             CTTTTGGGGTHHHHHHHHHH-HTTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTSCCSEEEE
T ss_pred             CHHHhhhhhhhHHHHHHHHH-hcCcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCceEEe
Confidence            99999999999999999865 46787 99999999999999999999999999 8999999999998887 899999988


Q ss_pred             CCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccC
Q 017336          240 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGN  318 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~  318 (373)
                      +.+.     +.+++.++ ++|+|||++|.+..++.++++|+++ |+++.+|......  .++... +.+++++.|+..+.
T Consensus       239 ~~~~-----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~~--~~~~~~~~~~~~~i~g~~~~~  309 (366)
T 1yqd_A          239 SRDQ-----EQMQAAAG-TLDGIIDTVSAVHPLLPLFGLLKSH-GKLILVGAPEKPL--ELPAFSLIAGRKIVAGSGIGG  309 (366)
T ss_dssp             TTCH-----HHHHHTTT-CEEEEEECCSSCCCSHHHHHHEEEE-EEEEECCCCSSCE--EECHHHHHTTTCEEEECCSCC
T ss_pred             ccCH-----HHHHHhhC-CCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEccCCCCC--CcCHHHHHhCCcEEEEecCCC
Confidence            7642     23555553 8999999999866788999999997 9999999865332  333333 34889999876432


Q ss_pred             CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336          319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                         .+++.++++++.++++.+.  + ++|||+++++|++.+.+++. +|++++++
T Consensus       310 ---~~~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~~  358 (366)
T 1yqd_A          310 ---MKETQEMIDFAAKHNITAD--I-EVISTDYLNTAMERLAKNDVRYRFVIDVG  358 (366)
T ss_dssp             ---HHHHHHHHHHHHHTTCCCC--E-EEECGGGHHHHHHHHHTTCCSSEEEECHH
T ss_pred             ---HHHHHHHHHHHHcCCCCCc--e-EEEcHHHHHHHHHHHHcCCcceEEEEEcc
Confidence               2468899999999988654  4 79999999999999998875 69999874

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=2.2e-53  Score=400.41  Aligned_cols=333  Identities=18%  Similarity=0.220  Sum_probs=275.2

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCC-CeEEEEEeeeecCccccccccc--CCCCCCC---CccccccceEEEEEeCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQA-MEVRIKIKYTSLCRTDLYFWES--KGQTPLF---PRIFGHEAAGVVESVGEGVS   77 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~-~evlV~v~~~~i~~~D~~~~~g--~~~~~~~---p~i~G~e~~G~V~~vG~~v~   77 (373)
                      |||+++.+++.+++++++|.|+|++ +||+|||.++|||++|++.+.|  .++...+   |.++|||++|+|++  ++ +
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~--~~-~   77 (366)
T 2cdc_A            1 MKAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEE--SY-H   77 (366)
T ss_dssp             CEEEEECTTSCCCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC-------CCSCEECCSEEEEEECS--CC-S
T ss_pred             CeEEEEeCCCCceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCCCCcCCCCCcCCcceEEEEEe--CC-C
Confidence            7999999888779999999999999 9999999999999999999988  5543456   99999999999999  67 8


Q ss_pred             CCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeC
Q 017336           78 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI  157 (373)
Q Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~  157 (373)
                      +|++||||++.+..+|+.|.+|++|++++|++..... .|...                  ..|+|+||++++++.++++
T Consensus        78 ~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~-~g~~~------------------~~G~~aey~~v~~~~~~~i  138 (366)
T 2cdc_A           78 GFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGE-AGIHK------------------MDGFMREWWYDDPKYLVKI  138 (366)
T ss_dssp             SCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEE-ETTBE------------------ECCSCBSEEEECGGGEEEE
T ss_pred             CCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCccc-CCccC------------------CCCceeEEEEechHHeEEC
Confidence            8999999999999999999999999999998643210 01100                  1369999999999999999


Q ss_pred             CCCCCchhhhhcccchhhhhhhhh--h--ccCCC--C-------CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh-
Q 017336          158 NPLAPLDKVCILSCGVSTGLGATL--N--VAKPE--R-------GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-  223 (373)
Q Consensus       158 p~~~~~~~aa~~~~~~~ta~~~l~--~--~~~~~--~-------~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~-  223 (373)
                      |++++ ++|+ ++.++.|||+++.  +  .++++  +       +++|||+|+|++|++++|+|+.+|+ +|+++++++ 
T Consensus       139 P~~l~-~~Aa-l~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~  215 (366)
T 2cdc_A          139 PKSIE-DIGI-LAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREP  215 (366)
T ss_dssp             CGGGT-TTGG-GHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCC
T ss_pred             cCCcc-hhhh-hcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCcc
Confidence            99999 7765 6778999999876  4  78888  8       9999999999999999999999999 899999998 


Q ss_pred             --hHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhH-HHHHHHhhcCCcEEEEEcCCCCCceeec
Q 017336          224 --KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM-ISAFECVHDGWGVAVLVGVPSKDAVFMT  300 (373)
Q Consensus       224 --~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~~g~~v~~g~~~~~~~~~~  300 (373)
                        +++++++++|++.+ + .+ +  +.+.+.+ +.+++|++||++|++..+ +.++++|+++ |+++.+|..... ...+
T Consensus       216 ~~~~~~~~~~~ga~~v-~-~~-~--~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~~~~~-~~~~  287 (366)
T 2cdc_A          216 TEVEQTVIEETKTNYY-N-SS-N--GYDKLKD-SVGKFDVIIDATGADVNILGNVIPLLGRN-GVLGLFGFSTSG-SVPL  287 (366)
T ss_dssp             CHHHHHHHHHHTCEEE-E-CT-T--CSHHHHH-HHCCEEEEEECCCCCTHHHHHHGGGEEEE-EEEEECSCCCSC-EEEE
T ss_pred             chHHHHHHHHhCCcee-c-hH-H--HHHHHHH-hCCCCCEEEECCCChHHHHHHHHHHHhcC-CEEEEEecCCCC-cccc
Confidence              89999999999988 7 54 3  5566666 446899999999986678 9999999997 999999986543 2333


Q ss_pred             cchh----hcccceEEEEeccCCCCCCCHHHHHHHHHcCCCC----CCCceeeeeccccHHHHHHH--HHcCCceeEEEe
Q 017336          301 KPIN----VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE----LEKFITHRIPFSEINKAFEY--MVKGEGLRCIIS  370 (373)
Q Consensus       301 ~~~~----~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~----~~~~~~~~~~l~~~~~a~~~--l~~~~~~k~v~~  370 (373)
                      +...    +.+++++.|+..+.   .++++++++++.+|++.    ++++++++|+|+++++|++.  +.++..+|++|+
T Consensus       288 ~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~  364 (366)
T 2cdc_A          288 DYKTLQEIVHTNKTIIGLVNGQ---KPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRIL  364 (366)
T ss_dssp             EHHHHHHHHHTTCEEEECCCCC---HHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEE
T ss_pred             ChhhhHHHHhcCcEEEEecCCC---HHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEe
Confidence            3333    44899999876432   34689999999999876    77888999999999999998  554445699998


Q ss_pred             cC
Q 017336          371 ME  372 (373)
Q Consensus       371 ~~  372 (373)
                      ++
T Consensus       365 ~~  366 (366)
T 2cdc_A          365 WE  366 (366)
T ss_dssp             CC
T ss_pred             cC
Confidence            74

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=5.7e-51  Score=379.48  Aligned_cols=312  Identities=25%  Similarity=0.327  Sum_probs=272.5

Q ss_pred             ccchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 017336            3 STAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         3 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      +|||+++.+++++  +++++.+.|+|+++||+|||.++|||++|++.+.|.++ ..+|.++|||++|+|+++|+++++|+
T Consensus         8 ~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~P~i~G~e~~G~V~~vG~~v~~~~   86 (334)
T 3qwb_A            8 QQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP-CEKPYVLGREASGTVVAKGKGVTNFE   86 (334)
T ss_dssp             EEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC-CCSSEECCSEEEEEEEEECTTCCSCC
T ss_pred             heEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC-CCCCCccccceEEEEEEECCCCCCCC
Confidence            4999999998876  89999999999999999999999999999999988665 45799999999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEe-cCceEeCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVH-SGCVAKINP  159 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~-~~~~~~~p~  159 (373)
                      +||||++.                                                  +.|+|+||+.++ ++.++++|+
T Consensus        87 ~GdrV~~~--------------------------------------------------~~G~~aey~~v~~~~~~~~~P~  116 (334)
T 3qwb_A           87 VGDQVAYI--------------------------------------------------SNSTFAQYSKISSQGPVMKLPK  116 (334)
T ss_dssp             TTCEEEEE--------------------------------------------------CSSCSBSEEEEETTSSEEECCT
T ss_pred             CCCEEEEe--------------------------------------------------eCCcceEEEEecCcceEEECCC
Confidence            99999854                                                  136999999999 999999999


Q ss_pred             CCCchh---hhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc
Q 017336          160 LAPLDK---VCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT  235 (373)
Q Consensus       160 ~~~~~~---aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~  235 (373)
                      ++++++   ++++++.++|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++
T Consensus       117 ~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~  195 (334)
T 3qwb_A          117 GTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYGAE  195 (334)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCS
T ss_pred             CCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCc
Confidence            999999   88888899999999888889999999999995 9999999999999999 899999999999999999999


Q ss_pred             eeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEE
Q 017336          236 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKG  313 (373)
Q Consensus       236 ~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g  313 (373)
                      .++++.+.+  +.+.+.+.+++ ++|++||++|+ ..++.++++|+++ |+++.+|...... ..++...+ .+++++.+
T Consensus       196 ~~~~~~~~~--~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~-~~~~~~~~~~~~~~~~~  270 (334)
T 3qwb_A          196 YLINASKED--ILRQVLKFTNGKGVDASFDSVGK-DTFEISLAALKRK-GVFVSFGNASGLI-PPFSITRLSPKNITLVR  270 (334)
T ss_dssp             EEEETTTSC--HHHHHHHHTTTSCEEEEEECCGG-GGHHHHHHHEEEE-EEEEECCCTTCCC-CCBCGGGGTTTTCEEEC
T ss_pred             EEEeCCCch--HHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhccC-CEEEEEcCCCCCC-CCcchhhhhhCceEEEE
Confidence            999987766  88999999877 89999999998 8899999999997 9999999865332 22333333 48899988


Q ss_pred             EeccCCCCC-C----CHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecCC
Q 017336          314 TFFGNYKPR-T----DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED  373 (373)
Q Consensus       314 ~~~~~~~~~-~----~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~~  373 (373)
                      +.++.+... +    .++++++++.+|++++.  ++++|+|+++++|++.+.+++. +|+++++++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~q  334 (334)
T 3qwb_A          271 PQLYGYIADPEEWKYYSDEFFGLVNSKKLNIK--IYKTYPLRDYRTAAADIESRKTVGKLVLEIPQ  334 (334)
T ss_dssp             CCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCC--EEEEEEGGGHHHHHHHHHTTCCCBEEEEECCC
T ss_pred             EEeccccCCHHHHHHHHHHHHHHHHCCCccCc--eeeEEcHHHHHHHHHHHHhCCCceEEEEecCC
Confidence            765443221 1    24688999999988765  8899999999999999998875 599999864

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=1e-51  Score=385.40  Aligned_cols=316  Identities=21%  Similarity=0.250  Sum_probs=268.7

Q ss_pred             Cc-ccchhhhccCCCC---eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCC
Q 017336            1 MS-STAAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEG   75 (373)
Q Consensus         1 m~-~~~a~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~   75 (373)
                      |+ +|||+++.++++|   +++++.+.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++
T Consensus         1 M~~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~   80 (340)
T 3gms_A            1 MSLHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAF   80 (340)
T ss_dssp             -CCEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTT
T ss_pred             CCcccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCC
Confidence            55 6999999999987   899999999999999999999999999999999987653 578999999999999999999


Q ss_pred             CCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceE
Q 017336           76 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVA  155 (373)
Q Consensus        76 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~  155 (373)
                      +++|++||||+...                                                 +.|+|+||+.++++.++
T Consensus        81 v~~~~vGdrV~~~~-------------------------------------------------~~G~~aey~~v~~~~~~  111 (340)
T 3gms_A           81 VSRELIGKRVLPLR-------------------------------------------------GEGTWQEYVKTSADFVV  111 (340)
T ss_dssp             SCGGGTTCEEEECS-------------------------------------------------SSCSSBSEEEEEGGGEE
T ss_pred             CCCCCCCCEEEecC-------------------------------------------------CCccceeEEEcCHHHeE
Confidence            99999999998431                                                 23699999999999999


Q ss_pred             eCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC
Q 017336          156 KINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  234 (373)
Q Consensus       156 ~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~  234 (373)
                      ++|+++++++||++++.++|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|+
T Consensus       112 ~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga  190 (340)
T 3gms_A          112 PIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGA  190 (340)
T ss_dssp             ECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTC
T ss_pred             ECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCC
Confidence            999999999999999999999999888999999999999998 5999999999999999 89999999999999999999


Q ss_pred             ceeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEE
Q 017336          235 TDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKG  313 (373)
Q Consensus       235 ~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g  313 (373)
                      +.++++.+.+  +.+.+.+.+++ ++|++|||+|++ ....++++|+++ |+++.+|..... .++.........+.+..
T Consensus       191 ~~~~~~~~~~--~~~~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~~~  265 (340)
T 3gms_A          191 AYVIDTSTAP--LYETVMELTNGIGADAAIDSIGGP-DGNELAFSLRPN-GHFLTIGLLSGI-QVNWAEIVTKAKVHANI  265 (340)
T ss_dssp             SEEEETTTSC--HHHHHHHHTTTSCEEEEEESSCHH-HHHHHHHTEEEE-EEEEECCCTTSC-CCCHHHHHHTSCCEEEE
T ss_pred             cEEEeCCccc--HHHHHHHHhCCCCCcEEEECCCCh-hHHHHHHHhcCC-CEEEEEeecCCC-CCCHHHhhhcccceEEE
Confidence            9999887765  88999999988 999999999984 456677999997 999999986532 22222111113344443


Q ss_pred             EeccCC-------CCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC-c-eeEEEecC
Q 017336          314 TFFGNY-------KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-G-LRCIISME  372 (373)
Q Consensus       314 ~~~~~~-------~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~-~-~k~v~~~~  372 (373)
                      ..+..+       ...++++++++++.+|++.+.+ ++++|+|+++++|++.+.+++ . +|+++++.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~-i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~~  332 (340)
T 3gms_A          266 FHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMK-VHSTYELADVKAAVDVVQSAEKTKGKVFLTSY  332 (340)
T ss_dssp             CCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCC-EEEEEEGGGHHHHHHHHHCTTCCSSEEEEECC
T ss_pred             EEehhhhhhcCHHHHHHHHHHHHHHHHcCCCcccc-ccEEEeHHHHHHHHHHHHhcCCCCCeEEEEEe
Confidence            322111       1124688999999999998754 789999999999999999987 4 79999875

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=2.4e-51  Score=397.06  Aligned_cols=340  Identities=17%  Similarity=0.174  Sum_probs=284.9

Q ss_pred             cccchhhhccC---------------CCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccC-------------CC
Q 017336            2 SSTAAAVAWEA---------------GKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-------------GQ   53 (373)
Q Consensus         2 ~~~~a~~~~~~---------------~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~-------------~~   53 (373)
                      .+|||+++..+               +++++++++|.|+|+++||||||.++|||++|++...+.             ..
T Consensus        29 ~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~g~~~  108 (456)
T 3krt_A           29 ESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVS  108 (456)
T ss_dssp             SCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHHHTSC
T ss_pred             cceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhccccc
Confidence            36999999876               234899999999999999999999999999998654321             10


Q ss_pred             ----CCCCC-ccccccceEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccc
Q 017336           54 ----TPLFP-RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFS  128 (373)
Q Consensus        54 ----~~~~p-~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~  128 (373)
                          ...+| .++|||++|+|+++|++|+.|++||||++.+. .|..|..|..+.++.|.+....   |+..        
T Consensus       109 ~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~-~c~~~~~~~~~~~~~c~~~~~~---G~~~--------  176 (456)
T 3krt_A          109 DLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL-SVELESSDGHNDTMLDPEQRIW---GFET--------  176 (456)
T ss_dssp             HHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCE-ECCCCSGGGTTSGGGCTTCEET---TTTS--------
T ss_pred             cccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCC-cccccccccccccccCcccccc---ccCC--------
Confidence                13467 69999999999999999999999999998654 6888999999999999876655   4321        


Q ss_pred             cCCCccccccCCcceeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhc--cCCCCCCEEEEECC-CHHHHHHH
Q 017336          129 INGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV--AKPERGSSVAVFGL-GAVGLAAA  205 (373)
Q Consensus       129 ~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~~~~vlI~G~-g~~G~~ai  205 (373)
                                ..|+|+||+++++++++++|+++++++||+++++++|||+++...  ++++++++|||+|+ |++|++++
T Consensus       177 ----------~~G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~av  246 (456)
T 3krt_A          177 ----------NFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYAT  246 (456)
T ss_dssp             ----------SSCSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHH
T ss_pred             ----------CCCcccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHH
Confidence                      126999999999999999999999999999999999999987654  78999999999998 99999999


Q ss_pred             HHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCc---------------cHHHHHHHHcCC-CccEEEEccCCh
Q 017336          206 EGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR---------------PIQEVIAEMTNG-GVDRSVECTGNI  269 (373)
Q Consensus       206 ~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~---------------~~~~~~~~~~~~-~~d~vid~~g~~  269 (373)
                      |+|+.+|+ +|++++++++|+++++++|++.++++.+.+.               .+.+.+++.+++ ++|+|||++|+ 
T Consensus       247 qlak~~Ga-~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~-  324 (456)
T 3krt_A          247 QFALAGGA-NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR-  324 (456)
T ss_dssp             HHHHHTTC-EEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCH-
T ss_pred             HHHHHcCC-eEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCc-
Confidence            99999999 7888889999999999999999998876541               245778888887 99999999998 


Q ss_pred             HhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeec
Q 017336          270 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP  348 (373)
Q Consensus       270 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~  348 (373)
                      +.+..++++++++ |+++.+|..... ...++... +.+++++.|+....+   +++.++++++++|++.  ++++++|+
T Consensus       325 ~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~--~~i~~~~~  397 (456)
T 3krt_A          325 ETFGASVFVTRKG-GTITTCASTSGY-MHEYDNRYLWMSLKRIIGSHFANY---REAWEANRLIAKGRIH--PTLSKVYS  397 (456)
T ss_dssp             HHHHHHHHHEEEE-EEEEESCCTTCS-EEEEEHHHHHHTTCEEEECCSCCH---HHHHHHHHHHHTTSSC--CCEEEEEE
T ss_pred             hhHHHHHHHhhCC-cEEEEEecCCCc-ccccCHHHHHhcCeEEEEeccCCH---HHHHHHHHHHHcCCcc--cceeEEEc
Confidence            8899999999997 999999987532 23333332 348889998875443   3567899999999875  56889999


Q ss_pred             cccHHHHHHHHHcCCc-eeEEEecC
Q 017336          349 FSEINKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       349 l~~~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                      |+++++|++.+.+++. +|++|.+.
T Consensus       398 l~~~~eA~~~l~~~~~~GKvvv~~~  422 (456)
T 3krt_A          398 LEDTGQAAYDVHRNLHQGKVGVLCL  422 (456)
T ss_dssp             GGGHHHHHHHHHTTCSSSEEEEESS
T ss_pred             HHHHHHHHHHHHhCCCCCcEEEEeC
Confidence            9999999999988875 59988763

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=4.3e-51  Score=378.75  Aligned_cols=312  Identities=21%  Similarity=0.267  Sum_probs=269.9

Q ss_pred             cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 017336            4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   81 (373)
Q Consensus         4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   81 (373)
                      |||+++.+++++  +++++.+.|+|+++||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|+++++|++
T Consensus         2 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~   81 (325)
T 3jyn_A            2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFKV   81 (325)
T ss_dssp             EEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             cEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence            999999998887  899999999999999999999999999999999998776678999999999999999999999999


Q ss_pred             CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336           82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  161 (373)
Q Consensus        82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~  161 (373)
                      ||||+....                                                ..|+|+||+.++++.++++|+++
T Consensus        82 GdrV~~~~~------------------------------------------------~~G~~aey~~v~~~~~~~~P~~~  113 (325)
T 3jyn_A           82 GDRVAYGTG------------------------------------------------PLGAYSEVHVLPEANLVKLADSV  113 (325)
T ss_dssp             TCEEEESSS------------------------------------------------SSCCSBSEEEEEGGGEEECCTTS
T ss_pred             CCEEEEecC------------------------------------------------CCccccceEEecHHHeEECCCCC
Confidence            999985421                                                13699999999999999999999


Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      ++++||++++..+|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++.++++
T Consensus       114 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~  192 (325)
T 3jyn_A          114 SFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDY  192 (325)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             CHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEeC
Confidence            999999999999999999888899999999999995 9999999999999999 89999999999999999999999998


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc-c-cceEEEEecc
Q 017336          241 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-N-ERTLKGTFFG  317 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~-~~~i~g~~~~  317 (373)
                      .+.+  +.+.+.+.+++ ++|++||++|+ +.+..++++++++ |+++.+|...... ..++...+. + .+++.+..++
T Consensus       193 ~~~~--~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  267 (325)
T 3jyn_A          193 SHED--VAKRVLELTDGKKCPVVYDGVGQ-DTWLTSLDSVAPR-GLVVSFGNASGPV-SGVNLGILAQKDSVYVTRPTLG  267 (325)
T ss_dssp             TTSC--HHHHHHHHTTTCCEEEEEESSCG-GGHHHHHTTEEEE-EEEEECCCTTCCC-CSCCTHHHHHTTSCEEECCCHH
T ss_pred             CCcc--HHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhcCC-CEEEEEecCCCCC-CCCCHHHHhhcCcEEEEeeeee
Confidence            7765  88999999987 99999999998 8899999999997 9999999876332 122332232 4 5666554433


Q ss_pred             CCC-CCCC----HHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          318 NYK-PRTD----LPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       318 ~~~-~~~~----~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      .+. ..++    ++++++++.+|++++.  ++++|+|+++++|++.+.+++. +|+||++
T Consensus       268 ~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          268 SYANNAQNLQTMADELFDMLASGKLKVD--GIEQYALKDAAKAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             HHSCSTTHHHHHHHHHHHHHHTTSSCCC--CCEEEEGGGHHHHHHHHHTTCCCSCEEEEC
T ss_pred             eecCCHHHHHHHHHHHHHHHHCCCeeCc--cccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            322 1223    3478999999988775  7899999999999999999885 5888863

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=3.5e-51  Score=383.46  Aligned_cols=313  Identities=19%  Similarity=0.237  Sum_probs=272.0

Q ss_pred             ccchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCC
Q 017336            3 STAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDL   79 (373)
Q Consensus         3 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~   79 (373)
                      +|||+++.+++.+  +++++.+.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++++.|
T Consensus        28 ~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~~~  107 (353)
T 4dup_A           28 EMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVGPGVSGY  107 (353)
T ss_dssp             SEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEECTTCCSC
T ss_pred             heeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEECCCCCCC
Confidence            5999999998766  899999999999999999999999999999999887653 4578999999999999999999999


Q ss_pred             CCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC
Q 017336           80 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP  159 (373)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~  159 (373)
                      ++||||+...                                                 ..|+|+||+.++++.++++|+
T Consensus       108 ~vGdrV~~~~-------------------------------------------------~~G~~aey~~v~~~~~~~~P~  138 (353)
T 4dup_A          108 AVGDKVCGLA-------------------------------------------------NGGAYAEYCLLPAGQILPFPK  138 (353)
T ss_dssp             CTTCEEEEEC-------------------------------------------------SSCCSBSEEEEEGGGEEECCT
T ss_pred             CCCCEEEEec-------------------------------------------------CCCceeeEEEEcHHHcEeCCC
Confidence            9999998541                                                 136999999999999999999


Q ss_pred             CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee
Q 017336          160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  238 (373)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi  238 (373)
                      ++++++||+++++++|||+++.+.++++++++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++.++
T Consensus       139 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~  217 (353)
T 4dup_A          139 GYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGAKRGI  217 (353)
T ss_dssp             TCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEE
T ss_pred             CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEE
Confidence            99999999999999999999888899999999999965 9999999999999999 899999999999999999999999


Q ss_pred             cCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEecc
Q 017336          239 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG  317 (373)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~  317 (373)
                      ++.+.+  +.+.+++.+++++|++|||+|+ +.+..++++|+++ |+++.+|.........++...+ .+++++.|+...
T Consensus       218 ~~~~~~--~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~  293 (353)
T 4dup_A          218 NYRSED--FAAVIKAETGQGVDIILDMIGA-AYFERNIASLAKD-GCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMR  293 (353)
T ss_dssp             ETTTSC--HHHHHHHHHSSCEEEEEESCCG-GGHHHHHHTEEEE-EEEEECCCTTCSEEEEEECHHHHHTTCEEEECCST
T ss_pred             eCCchH--HHHHHHHHhCCCceEEEECCCH-HHHHHHHHHhccC-CEEEEEEecCCCcccCCCHHHHHhcCceEEEEecc
Confidence            887766  8888888885599999999998 6889999999997 9999999876433221333333 489999998765


Q ss_pred             CCCCCC-------CHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          318 NYKPRT-------DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       318 ~~~~~~-------~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      .+...+       .+++++++++++++.  ++++++|+|+++++|++.+.+++. +|++|++
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          294 PRTAEEKRAIRDDLLSEVWPLLEAGTVA--PVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             TSCHHHHHHHHHHHHHHTHHHHHHTSSC--CCEEEEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             ccchhhhHHHHHHHHHHHHHHHHCCCcc--CCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            433211       167789999999864  568999999999999999998885 5999875

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=3.2e-51  Score=395.70  Aligned_cols=340  Identities=16%  Similarity=0.172  Sum_probs=280.8

Q ss_pred             cccchhhhccCC-------------CCeEEEEeecCCCCCCeEEEEEeeeecCcccccccc----------------cCC
Q 017336            2 SSTAAAVAWEAG-------------KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE----------------SKG   52 (373)
Q Consensus         2 ~~~~a~~~~~~~-------------~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~----------------g~~   52 (373)
                      .+|||+++..++             +++++++++.|+|+++||+|||.++|||++|++...                +.+
T Consensus        23 ~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~~g~~  102 (447)
T 4a0s_A           23 DTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGW  102 (447)
T ss_dssp             SEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHTTCGG
T ss_pred             hhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhcccCcc
Confidence            368999998887             249999999999999999999999999999974321                111


Q ss_pred             C-CCCCC-ccccccceEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccC
Q 017336           53 Q-TPLFP-RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSIN  130 (373)
Q Consensus        53 ~-~~~~p-~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~  130 (373)
                      . ...+| .++|||++|+|+++|++|++|++||||++.+...|+.|. |.++.++.|.+....   |+..          
T Consensus       103 ~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~-~~~~~~~~c~~~~~~---G~~~----------  168 (447)
T 4a0s_A          103 ATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEP-ATHGDGMLGTEQRAW---GFET----------  168 (447)
T ss_dssp             GGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSG-GGGTCTTCSTTCEET---TTTS----------
T ss_pred             ccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCccc-ccccccccccccccc---cccC----------
Confidence            1 12456 699999999999999999999999999999988888887 555778999876655   4321          


Q ss_pred             CCccccccCCcceeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhh--ccCCCCCCEEEEECC-CHHHHHHHHH
Q 017336          131 GEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN--VAKPERGSSVAVFGL-GAVGLAAAEG  207 (373)
Q Consensus       131 g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~~~~vlI~G~-g~~G~~ai~l  207 (373)
                              ..|+|+||+.+++++++++|+++++++||++++++.|||+++..  .++++++++|||+|+ |++|++++|+
T Consensus       169 --------~~G~~aey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~ql  240 (447)
T 4a0s_A          169 --------NFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQF  240 (447)
T ss_dssp             --------SSCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHH
T ss_pred             --------CCCceeeeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHH
Confidence                    12699999999999999999999999999999999999998764  388999999999998 9999999999


Q ss_pred             HHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCC----------------ccHHHHHHHHcCCCccEEEEccCChHh
Q 017336          208 ARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD----------------RPIQEVIAEMTNGGVDRSVECTGNIDN  271 (373)
Q Consensus       208 a~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~----------------~~~~~~~~~~~~~~~d~vid~~g~~~~  271 (373)
                      |+.+|+ +|+++++++++++.++++|++.++++.+.+                ..+.+.+++.+++++|++||++|+ ..
T Consensus       241 a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~-~~  318 (447)
T 4a0s_A          241 VKNGGG-IPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGR-VT  318 (447)
T ss_dssp             HHHTTC-EEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCH-HH
T ss_pred             HHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCc-hH
Confidence            999999 888888999999999999999888754322                113667778884489999999998 68


Q ss_pred             HHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccc
Q 017336          272 MISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS  350 (373)
Q Consensus       272 ~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~  350 (373)
                      +..++++++++ |+++.+|..... ...+.... +.+++++.|+.....   +++.++++++.+|++.  ++++++|+|+
T Consensus       319 ~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~--~~i~~~~~l~  391 (447)
T 4a0s_A          319 FGLSVIVARRG-GTVVTCGSSSGY-LHTFDNRYLWMKLKKIVGSHGANH---EEQQATNRLFESGAVV--PAMSAVYPLA  391 (447)
T ss_dssp             HHHHHHHSCTT-CEEEESCCTTCS-EEEEEHHHHHHTTCEEEECCSCCH---HHHHHHHHHHHTTSSC--CCEEEEEEGG
T ss_pred             HHHHHHHHhcC-CEEEEEecCCCc-ccccCHHHHHhCCCEEEecCCCCH---HHHHHHHHHHHcCCcc--cceeEEEcHH
Confidence            89999999997 999999976532 22333332 348889998765432   3577899999999875  5689999999


Q ss_pred             cHHHHHHHHHcCCc-eeEEEecC
Q 017336          351 EINKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       351 ~~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                      ++++|++.+.+++. +|++|.+.
T Consensus       392 ~~~~A~~~~~~~~~~GKvvv~~~  414 (447)
T 4a0s_A          392 EAAEACRVVQTSRQVGKVAVLCM  414 (447)
T ss_dssp             GHHHHHHHHHTTCCSSEEEEESS
T ss_pred             HHHHHHHHHhcCCCceEEEEEeC
Confidence            99999999988775 59988763

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=5.8e-51  Score=380.33  Aligned_cols=310  Identities=23%  Similarity=0.275  Sum_probs=264.2

Q ss_pred             cccchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCC
Q 017336            2 SSTAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSD   78 (373)
Q Consensus         2 ~~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~   78 (373)
                      .+|||+++.+++++  +++++++.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++++ 
T Consensus        20 ~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~-   98 (342)
T 4eye_A           20 GSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAPEGSG-   98 (342)
T ss_dssp             CEEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEECCTTSS-
T ss_pred             cceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEECCCCC-
Confidence            45999999988776  999999999999999999999999999999999887653 57899999999999999999999 


Q ss_pred             CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336           79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  158 (373)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p  158 (373)
                      |++||||++..                                                 ..|+|+||+.++++.++++|
T Consensus        99 ~~vGDrV~~~~-------------------------------------------------~~G~~aey~~v~~~~~~~iP  129 (342)
T 4eye_A           99 IKPGDRVMAFN-------------------------------------------------FIGGYAERVAVAPSNILPTP  129 (342)
T ss_dssp             CCTTCEEEEEC-------------------------------------------------SSCCSBSEEEECGGGEEECC
T ss_pred             CCCCCEEEEec-------------------------------------------------CCCcceEEEEEcHHHeEECC
Confidence            99999998542                                                 12699999999999999999


Q ss_pred             CCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee
Q 017336          159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF  237 (373)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v  237 (373)
                      +++++++||+++++++|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++++|++.+
T Consensus       130 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~v  208 (342)
T 4eye_A          130 PQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIV  208 (342)
T ss_dssp             TTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEE
T ss_pred             CCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEE
Confidence            999999999999999999999878899999999999998 9999999999999999 89999999999999999999999


Q ss_pred             ecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccch-hhcccceEEEEe
Q 017336          238 VNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTF  315 (373)
Q Consensus       238 i~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~  315 (373)
                      +++. .+  +.+.+++.+++ ++|++|||+|+ +.+..++++++++ |+++.+|..... ...+... .+.+++++.|+.
T Consensus       209 ~~~~-~~--~~~~v~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~g~~  282 (342)
T 4eye_A          209 LPLE-EG--WAKAVREATGGAGVDMVVDPIGG-PAFDDAVRTLASE-GRLLVVGFAAGG-IPTIKVNRLLLRNASLIGVA  282 (342)
T ss_dssp             EESS-TT--HHHHHHHHTTTSCEEEEEESCC---CHHHHHHTEEEE-EEEEEC-----------CCCCGGGTTCEEEECC
T ss_pred             ecCc-hh--HHHHHHHHhCCCCceEEEECCch-hHHHHHHHhhcCC-CEEEEEEccCCC-CCccCHHHHhhcCCEEEEEe
Confidence            9887 44  88999999988 99999999998 6889999999997 999999976532 1222222 245899999987


Q ss_pred             ccCCC------CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          316 FGNYK------PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       316 ~~~~~------~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      .+.+.      ..+.+++++++++++   ++++++++|+|+++++|++.+.+++. +|++|++
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~l~~~g---l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          283 WGEFLRTHADYLYETQAGLEKLVAEG---MRPPVSARIPLSEGRQALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             HHHHHHHCTTHHHHHHHHHHHHHHTT---CCCCEEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             hhhhhhcCHHHHHHHHHHHHHHHHcC---CCCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            54321      013478899999999   45668999999999999999999885 5998863

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=2.6e-52  Score=385.43  Aligned_cols=308  Identities=14%  Similarity=0.152  Sum_probs=245.7

Q ss_pred             CcccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 017336            1 MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         1 m~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |++|||+++.+..+.+++++.+.|+|+++||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|+++++|+
T Consensus         2 M~tMka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   81 (315)
T 3goh_A            2 MEQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSKM   81 (315)
T ss_dssp             CCEEEEEEEETTTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTCCCTTCCCCSEEEEEEEEECTTSCGGG
T ss_pred             CcceEEEEEeCCCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCcCCCCCEeeeeeEEEEEEeCCCCCCCC
Confidence            88999999996444599999999999999999999999999999999999877778899999999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||||+..+.                                              ....|+|+||+.++++.++++|++
T Consensus        82 vGdrV~~~~~----------------------------------------------~~~~G~~aey~~v~~~~~~~iP~~  115 (315)
T 3goh_A           82 LGRRVAYHTS----------------------------------------------LKRHGSFAEFTVLNTDRVMTLPDN  115 (315)
T ss_dssp             TTCEEEEECC----------------------------------------------TTSCCSSBSEEEEETTSEEECCTT
T ss_pred             CCCEEEEeCC----------------------------------------------CCCCcccccEEEEcHHHhccCcCC
Confidence            9999996531                                              012369999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      +++++||+++++++|||+++ +.++++++++|||+|+|++|++++|+|+.+|+ +|++++ +++|+++++++|++.+++ 
T Consensus       116 ~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~-  191 (315)
T 3goh_A          116 LSFERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLYR-  191 (315)
T ss_dssp             SCHHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEES-
T ss_pred             CCHHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEEc-
Confidence            99999999999999999998 88999999999999999999999999999999 899998 899999999999999884 


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEeccCC
Q 017336          241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNY  319 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~  319 (373)
                      +  .    +.+    ++++|+||||+|+ +.+..++++|+++ |+++.+|..............+ .+++++.++.....
T Consensus       192 d--~----~~v----~~g~Dvv~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (315)
T 3goh_A          192 E--P----SQV----TQKYFAIFDAVNS-QNAAALVPSLKAN-GHIICIQDRIPAPIDPAFTRTISYHEIALGALHDFGD  259 (315)
T ss_dssp             S--G----GGC----CSCEEEEECC--------TTGGGEEEE-EEEEEECCC----------CCSEEEEECGGGHHHHCC
T ss_pred             C--H----HHh----CCCccEEEECCCc-hhHHHHHHHhcCC-CEEEEEeCCCCccccchhhhcceeeEEEeecccccCC
Confidence            1  1    112    4499999999998 4558899999997 9999997644222221111111 13333333221111


Q ss_pred             C-----CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEecCC
Q 017336          320 K-----PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED  373 (373)
Q Consensus       320 ~-----~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~~~  373 (373)
                      .     ..+.++++++++++|++.  ++++++|||+++++|++.+. ...+|++++++|
T Consensus       260 ~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~-~~~gKvvi~~~~  315 (315)
T 3goh_A          260 RQDWQILMQQGEALLTLIAQGKME--IAAPDIFRFEQMIEALDHSE-QTKLKTVLTLNE  315 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSSC--CCCCEEEEGGGHHHHHHHHH-HHCCCEEEESCC
T ss_pred             hhHHHHHHHHHHHHHHHHHCCCcc--cccceEecHHHHHHHHHHHH-hcCCcEEEEecC
Confidence            1     012367899999999875  56889999999999999998 556799999875

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=1.2e-50  Score=380.88  Aligned_cols=314  Identities=17%  Similarity=0.196  Sum_probs=265.7

Q ss_pred             CcccchhhhccC---CC--CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCC
Q 017336            1 MSSTAAAVAWEA---GK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG   75 (373)
Q Consensus         1 m~~~~a~~~~~~---~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~   75 (373)
                      |++|||+++.++   ++  .++++++|.|+|+++||+|||.+++||++|++.+.|..+...+|.++|||++|+|+++|++
T Consensus        20 m~~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~   99 (363)
T 4dvj_A           20 FQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAVGPD   99 (363)
T ss_dssp             CCEEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC--CCSBCCCCCEEEEEEEECTT
T ss_pred             hheeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCCCCCCCcccceeEEEEEEeCCC
Confidence            788999999876   33  3899999999999999999999999999999999998776788999999999999999999


Q ss_pred             CCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceE
Q 017336           76 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVA  155 (373)
Q Consensus        76 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~  155 (373)
                      ++.|++||||+....                                              ....|+|+||+.++++.++
T Consensus       100 v~~~~vGdrV~~~~~----------------------------------------------~~~~G~~aey~~v~~~~~~  133 (363)
T 4dvj_A          100 VTLFRPGDEVFYAGS----------------------------------------------IIRPGTNAEFHLVDERIVG  133 (363)
T ss_dssp             CCSCCTTCEEEECCC----------------------------------------------TTSCCSCBSEEEEEGGGCE
T ss_pred             CCCCCCCCEEEEccC----------------------------------------------CCCCccceEEEEeCHHHee
Confidence            999999999985420                                              1123699999999999999


Q ss_pred             eCCCCCCchhhhhcccchhhhhhhhhhccCCC-----CCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEEcCChhHHHH
Q 017336          156 KINPLAPLDKVCILSCGVSTGLGATLNVAKPE-----RGSSVAVFG-LGAVGLAAAEGARIA-GASRIIGVDRSSKRFEE  228 (373)
Q Consensus       156 ~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~-----~~~~vlI~G-~g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~  228 (373)
                      ++|+++++++||+++++++|||+++.+.++++     ++++|||+| +|++|++++|+|+.+ |+ +|++++++++|+++
T Consensus       134 ~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~-~Vi~~~~~~~~~~~  212 (363)
T 4dvj_A          134 RKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDL-TVIATASRPETQEW  212 (363)
T ss_dssp             ECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCS-EEEEECSSHHHHHH
T ss_pred             ECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCC-EEEEEeCCHHHHHH
Confidence            99999999999999999999999988888888     899999998 599999999999985 77 89999999999999


Q ss_pred             HHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cc
Q 017336          229 AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LN  307 (373)
Q Consensus       229 ~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~  307 (373)
                      ++++|++.++++.+ +  +.+.+++..++++|+||||+|++..++.++++|+++ |+++.+|...   .+  +...+ .+
T Consensus       213 ~~~lGad~vi~~~~-~--~~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~---~~--~~~~~~~k  283 (363)
T 4dvj_A          213 VKSLGAHHVIDHSK-P--LAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQ-GRFCLIDDPS---AF--DIMLFKRK  283 (363)
T ss_dssp             HHHTTCSEEECTTS-C--HHHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTT-CEEEECSCCS---SC--CGGGGTTT
T ss_pred             HHHcCCCEEEeCCC-C--HHHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCC-CEEEEECCCC---cc--chHHHhhc
Confidence            99999999998865 3  888888875559999999999977899999999997 9999996532   22  22333 37


Q ss_pred             cceEEEEeccCC-----CC----CCCHHHHHHHHHcCCCCCCCceeeee---ccccHHHHHHHHHcCCc-eeEEEecC
Q 017336          308 ERTLKGTFFGNY-----KP----RTDLPSVVDMYMNKQLELEKFITHRI---PFSEINKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       308 ~~~i~g~~~~~~-----~~----~~~~~~~~~~l~~~~l~~~~~~~~~~---~l~~~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                      ++++.++.....     .+    .+.++++++++++|++.+  .++++|   +++++++|++.+.+++. +|++|++.
T Consensus       284 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~~  359 (363)
T 4dvj_A          284 AVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRT--TLTNRLSPINAANLKQAHALVESGTARGKVVIEGF  359 (363)
T ss_dssp             TCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSCC--CEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEECS
T ss_pred             cceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCeec--cccceecCCCHHHHHHHHHHHHhCCCceEEEEeCc
Confidence            888888654321     11    134778999999998764  466665   99999999999999885 59999874

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=2.2e-50  Score=380.38  Aligned_cols=321  Identities=18%  Similarity=0.201  Sum_probs=263.6

Q ss_pred             ccchhhhccCCCCeEEE-EeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 017336            3 STAAAVAWEAGKPLIIQ-DVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   81 (373)
Q Consensus         3 ~~~a~~~~~~~~~~~~~-~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   81 (373)
                      +|||+++.+++. ++++ +++.|+|+++||+|||.+++||++|++.+.+.   ..+|.++|||++|+|+++|++++.|++
T Consensus        11 ~mkA~v~~~~~~-l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~---~~~p~v~G~e~~G~V~~vG~~v~~~~~   86 (371)
T 3gqv_A           11 QQTALTVNDHDE-VTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF---ATPWAFLGTDYAGTVVAVGSDVTHIQV   86 (371)
T ss_dssp             CEEEEEECTTSC-EEEEEEECCCCCCTTSEEEEEEEEECCGGGGC--------CCTTSCCCSEEEEEEEEECTTCCSCCT
T ss_pred             hceeEEEcCCCc-eEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC---CCCCccCccccEEEEEEeCCCCCCCCC
Confidence            599999998866 9998 99999999999999999999999999988762   346899999999999999999999999


Q ss_pred             CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336           82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  161 (373)
Q Consensus        82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~  161 (373)
                      ||||...       |..|..+.                                  ...|+|+||++++++.++++|+++
T Consensus        87 GdrV~~~-------~~~~~~~~----------------------------------~~~G~~aey~~v~~~~~~~~P~~~  125 (371)
T 3gqv_A           87 GDRVYGA-------QNEMCPRT----------------------------------PDQGAFSQYTVTRGRVWAKIPKGL  125 (371)
T ss_dssp             TCEEEEE-------CCTTCTTC----------------------------------TTCCSSBSEEECCTTCEEECCTTC
T ss_pred             CCEEEEe-------ccCCCCCC----------------------------------CCCCcCcCeEEEchhheEECCCCC
Confidence            9999754       44443221                                  123699999999999999999999


Q ss_pred             Cchhhhhcccchhhhhhhhhhc-cCC-----------CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHH
Q 017336          162 PLDKVCILSCGVSTGLGATLNV-AKP-----------ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE  228 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~-~~~-----------~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~  228 (373)
                      ++++||++++++.|||+++.+. .++           +++++|||+|+ |++|++++|+|+.+|+ +|+++. +++|+++
T Consensus       126 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~  203 (371)
T 3gqv_A          126 SFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDL  203 (371)
T ss_dssp             CHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHH
T ss_pred             CHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHH
Confidence            9999999999999999998776 443           89999999998 8999999999999999 888885 7899999


Q ss_pred             HHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHh-hcCCcEEEEEcCCCCC------ceeecc
Q 017336          229 AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECV-HDGWGVAVLVGVPSKD------AVFMTK  301 (373)
Q Consensus       229 ~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l-~~~~g~~v~~g~~~~~------~~~~~~  301 (373)
                      ++++|+++++++.+.+  +.+.+++.+++++|+||||+|++..++.++++| +++ |+++.+|.....      ......
T Consensus       204 ~~~lGa~~vi~~~~~~--~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~~~~~~~~  280 (371)
T 3gqv_A          204 AKSRGAEEVFDYRAPN--LAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAG-GHYVSLNPFPEHAATRKMVTTDWT  280 (371)
T ss_dssp             HHHTTCSEEEETTSTT--HHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTC-EEEEESSCCCC---CCSCEEEEEC
T ss_pred             HHHcCCcEEEECCCch--HHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCC-CEEEEEecCccccccccccceeee
Confidence            9999999999988776  889999999889999999999988899999999 586 999999965421      112211


Q ss_pred             --chhhcccceEEEEeccCCCCC------CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc--eeEEEec
Q 017336          302 --PINVLNERTLKGTFFGNYKPR------TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG--LRCIISM  371 (373)
Q Consensus       302 --~~~~~~~~~i~g~~~~~~~~~------~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~--~k~v~~~  371 (373)
                        ...+.+++++.|+........      +.++++++++.+|++.+.+++++.|+|+++++|++.+.+++.  .|+++++
T Consensus       281 ~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~  360 (371)
T 3gqv_A          281 LGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRL  360 (371)
T ss_dssp             CGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEE
T ss_pred             eeeeeccccccccccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEe
Confidence              122347888877643222110      123478899999999998888888999999999999998874  3788877


Q ss_pred             CC
Q 017336          372 ED  373 (373)
Q Consensus       372 ~~  373 (373)
                      +|
T Consensus       361 ~~  362 (371)
T 3gqv_A          361 EG  362 (371)
T ss_dssp             CC
T ss_pred             CC
Confidence            53

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=4.9e-50  Score=374.77  Aligned_cols=312  Identities=18%  Similarity=0.145  Sum_probs=264.8

Q ss_pred             cccchhhhccCC-----CCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCC
Q 017336            2 SSTAAAVAWEAG-----KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV   76 (373)
Q Consensus         2 ~~~~a~~~~~~~-----~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v   76 (373)
                      |+|||+++.++|     ..++++++|.|+|+++||+|||.+++||++|++.+.|.  ...+|.++|||++|+|+++|+++
T Consensus         1 m~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~--~~~~p~i~G~e~~G~V~~vG~~v   78 (346)
T 3fbg_A            1 MSLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD--VSKAPRVLGFDAIGVVESVGNEV   78 (346)
T ss_dssp             -CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC--CSSSCBCCCCCEEEEEEEECTTC
T ss_pred             CCcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC--CCCCCcCcCCccEEEEEEeCCCC
Confidence            479999999876     34899999999999999999999999999999988875  45679999999999999999999


Q ss_pred             CCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEe
Q 017336           77 SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK  156 (373)
Q Consensus        77 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~  156 (373)
                      +.|++||||+....                                              ....|+|+||+.++++.+++
T Consensus        79 ~~~~~GdrV~~~~~----------------------------------------------~~~~G~~aey~~v~~~~~~~  112 (346)
T 3fbg_A           79 TMFNQGDIVYYSGS----------------------------------------------PDQNGSNAEYQLINERLVAK  112 (346)
T ss_dssp             CSCCTTCEEEECCC----------------------------------------------TTSCCSSBSEEEEEGGGEEE
T ss_pred             CcCCCCCEEEEcCC----------------------------------------------CCCCcceeEEEEEChHHeEE
Confidence            99999999985411                                              01236999999999999999


Q ss_pred             CCCCCCchhhhhcccchhhhhhhhhhccCCC------CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH
Q 017336          157 INPLAPLDKVCILSCGVSTGLGATLNVAKPE------RGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA  229 (373)
Q Consensus       157 ~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~------~~~~vlI~G-~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~  229 (373)
                      +|+++++++||++++++.|||+++.+.++++      ++++|||+| +|++|++++|+|+.+|+ +|+++++++++++++
T Consensus       113 iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~  191 (346)
T 3fbg_A          113 APKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWT  191 (346)
T ss_dssp             CCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHH
T ss_pred             CCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence            9999999999999999999999988889998      999999995 59999999999999999 899999999999999


Q ss_pred             HhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-ccc
Q 017336          230 KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNE  308 (373)
Q Consensus       230 ~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~  308 (373)
                      +++|++.++++++ +  +.+.+++..++++|+||||+|++..++.++++|+++ |+++.++...  ..++  ...+ .++
T Consensus       192 ~~lGa~~vi~~~~-~--~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~-G~iv~~~~~~--~~~~--~~~~~~~~  263 (346)
T 3fbg_A          192 KKMGADIVLNHKE-S--LLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPR-GHIATIVAFE--NDQD--LNALKPKS  263 (346)
T ss_dssp             HHHTCSEEECTTS-C--HHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEE-EEEEESSCCS--SCBC--GGGGTTTT
T ss_pred             HhcCCcEEEECCc-c--HHHHHHHhCCCCccEEEECCCchHHHHHHHHHhccC-CEEEEECCCC--CCCc--cccccccc
Confidence            9999999998865 3  888888884449999999999977889999999997 9999887532  2222  2233 388


Q ss_pred             ceEEEEeccCCCC---------CCCHHHHHHHHHcCCCCCCCceeeee---ccccHHHHHHHHHcCCc-eeEEEecC
Q 017336          309 RTLKGTFFGNYKP---------RTDLPSVVDMYMNKQLELEKFITHRI---PFSEINKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       309 ~~i~g~~~~~~~~---------~~~~~~~~~~l~~~~l~~~~~~~~~~---~l~~~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                      +++.++.......         .+.++++++++.+|++.  +.++++|   +|+++++|++.+.+++. +|++++++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~  338 (346)
T 3fbg_A          264 LSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQ--PTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLN  338 (346)
T ss_dssp             CEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSC--CCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC-
T ss_pred             eEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCEE--CCccceecCCCHHHHHHHHHHHhcCCcceEEEEecC
Confidence            8888865432111         12477899999999875  4477777   99999999999999885 59999885

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=3.9e-50  Score=376.45  Aligned_cols=318  Identities=22%  Similarity=0.315  Sum_probs=266.8

Q ss_pred             CcccchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCC-
Q 017336            1 MSSTAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGV-   76 (373)
Q Consensus         1 m~~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v-   76 (373)
                      |.+|||+++.+++.+  +++++.+.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++ 
T Consensus        20 ~~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~~v~   99 (354)
T 2j8z_A           20 FQSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQ   99 (354)
T ss_dssp             -CEEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEECSCC-
T ss_pred             hhheeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEECCCcC
Confidence            567999999988864  889999999999999999999999999999998886653 3478999999999999999999 


Q ss_pred             CCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEe
Q 017336           77 SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK  156 (373)
Q Consensus        77 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~  156 (373)
                      +.|++||||++..                                                 ..|+|+||+.++++.+++
T Consensus       100 ~~~~vGdrV~~~~-------------------------------------------------~~G~~aey~~v~~~~~~~  130 (354)
T 2j8z_A          100 GHWKIGDTAMALL-------------------------------------------------PGGGQAQYVTVPEGLLMP  130 (354)
T ss_dssp             -CCCTTCEEEEEC-------------------------------------------------SSCCSBSEEEEEGGGEEE
T ss_pred             CCCCCCCEEEEec-------------------------------------------------CCCcceeEEEeCHHHcEE
Confidence            9999999998541                                                 126999999999999999


Q ss_pred             CCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc
Q 017336          157 INPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT  235 (373)
Q Consensus       157 ~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~  235 (373)
                      +|+++++++||+++++++|||+++.+.++++++++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|++
T Consensus       131 iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g~~  209 (354)
T 2j8z_A          131 IPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGAA  209 (354)
T ss_dssp             CCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCS
T ss_pred             CCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCc
Confidence            99999999999999999999999878899999999999985 9999999999999999 899999999999999999999


Q ss_pred             eeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-hh-hcccceEE
Q 017336          236 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-IN-VLNERTLK  312 (373)
Q Consensus       236 ~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~-~~~~~~i~  312 (373)
                      .++++.+.+  +.+.+.+.+.+ ++|++||++|+ ..+..++++|+++ |+++.+|..... ...++. .. +.+++++.
T Consensus       210 ~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~G~-~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~~i~  284 (354)
T 2j8z_A          210 AGFNYKKED--FSEATLKFTKGAGVNLILDCIGG-SYWEKNVNCLALD-GRWVLYGLMGGG-DINGPLFSKLLFKRGSLI  284 (354)
T ss_dssp             EEEETTTSC--HHHHHHHHTTTSCEEEEEESSCG-GGHHHHHHHEEEE-EEEEECCCTTCS-CCCSCHHHHHHHTTCEEE
T ss_pred             EEEecCChH--HHHHHHHHhcCCCceEEEECCCc-hHHHHHHHhccCC-CEEEEEeccCCC-ccCCChhHHHHhCCCEEE
Confidence            988887655  88888888876 89999999998 5888999999997 999999976532 223333 33 34889999


Q ss_pred             EEeccCCCCCC------C-HHHHHHHHHcC-CCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecCC
Q 017336          313 GTFFGNYKPRT------D-LPSVVDMYMNK-QLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED  373 (373)
Q Consensus       313 g~~~~~~~~~~------~-~~~~~~~l~~~-~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~~  373 (373)
                      |+.........      . ++++++++.+| ++.++++++++|+|+++++|++.+.+++. +|+++++++
T Consensus       285 g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  354 (354)
T 2j8z_A          285 TSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELPQ  354 (354)
T ss_dssp             ECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             EEEcccccccccHHHHHHHHHHHHHHHHcCCCccccCccceEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence            87654321100      1 23467788888 44556779999999999999999988764 699998763

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=3.7e-50  Score=375.05  Aligned_cols=313  Identities=21%  Similarity=0.271  Sum_probs=265.9

Q ss_pred             cccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC--CCCCCccccccceEEEEEeCCCCCCC
Q 017336            2 SSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ--TPLFPRIFGHEAAGVVESVGEGVSDL   79 (373)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~   79 (373)
                      .+|||+++.+++++++++++|.|+|+++||||||.+++||++|++.+.|..+  ...+|.++|||++|+|+++|+++++|
T Consensus         6 ~~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~   85 (343)
T 3gaz_A            6 PTMIAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEVDSF   85 (343)
T ss_dssp             CEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTTCCSC
T ss_pred             hhheEEEEecCCCceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCCCCCC
Confidence            4699999999998899999999999999999999999999999999887643  25689999999999999999999999


Q ss_pred             CCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC
Q 017336           80 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP  159 (373)
Q Consensus        80 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~  159 (373)
                      ++||||+....                          |..                  ...|+|+||+.++++.++++|+
T Consensus        86 ~vGdrV~~~~~--------------------------g~~------------------~~~G~~aey~~v~~~~~~~~P~  121 (343)
T 3gaz_A           86 RVGDAVFGLTG--------------------------GVG------------------GLQGTHAQFAAVDARLLASKPA  121 (343)
T ss_dssp             CTTCEEEEECC--------------------------SST------------------TCCCSSBSEEEEEGGGEEECCT
T ss_pred             CCCCEEEEEeC--------------------------CCC------------------CCCcceeeEEEecHHHeeeCCC
Confidence            99999986421                          100                  0136999999999999999999


Q ss_pred             CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee
Q 017336          160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  238 (373)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi  238 (373)
                      ++++++||++++++.|||+++.+.++++++++|||+|+ |++|++++|+|+..|+ +|+++ ++++++++++++|++. +
T Consensus       122 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa~~-i  198 (343)
T 3gaz_A          122 ALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGATP-I  198 (343)
T ss_dssp             TSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTSEE-E
T ss_pred             CCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCCCE-e
Confidence            99999999999999999999878899999999999995 9999999999999999 89999 8899999999999998 7


Q ss_pred             cCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEecc
Q 017336          239 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFG  317 (373)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~  317 (373)
                      + ...+  +.+.+.+.+++ ++|++|||+|+ +.+..++++|+++ |+++.+|...   .++.. ..+.+++++.++...
T Consensus       199 ~-~~~~--~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~g~~~---~~~~~-~~~~~~~~~~g~~~~  269 (343)
T 3gaz_A          199 D-ASRE--PEDYAAEHTAGQGFDLVYDTLGG-PVLDASFSAVKRF-GHVVSCLGWG---THKLA-PLSFKQATYSGVFTL  269 (343)
T ss_dssp             E-TTSC--HHHHHHHHHTTSCEEEEEESSCT-HHHHHHHHHEEEE-EEEEESCCCS---CCCCH-HHHHTTCEEEECCTT
T ss_pred             c-cCCC--HHHHHHHHhcCCCceEEEECCCc-HHHHHHHHHHhcC-CeEEEEcccC---ccccc-hhhhcCcEEEEEEec
Confidence            6 4444  88888888887 99999999998 7899999999997 9999998764   12211 123488999887542


Q ss_pred             CC--------CCCCCHHHHHHHHHcCCCCCCCcee-eeeccccHHHHHHHHHcCCc-----eeEEEecC
Q 017336          318 NY--------KPRTDLPSVVDMYMNKQLELEKFIT-HRIPFSEINKAFEYMVKGEG-----LRCIISME  372 (373)
Q Consensus       318 ~~--------~~~~~~~~~~~~l~~~~l~~~~~~~-~~~~l~~~~~a~~~l~~~~~-----~k~v~~~~  372 (373)
                      ..        ...++++++++++.+|++.  ++++ ++|+|+++++|++.+.+++.     +|++++..
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~  336 (343)
T 3gaz_A          270 HTLLANEGLAHFGEMLREADALVQTGKLA--PRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVE  336 (343)
T ss_dssp             HHHHHTCSHHHHHHHHHHHHHHHHTTCCC--CCBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC
T ss_pred             cchhcccchHHHHHHHHHHHHHHHCCCcc--cCccCcEecHHHHHHHHHHHHcCCCcccccceEEEEec
Confidence            11        0114588899999999875  4577 79999999999999988774     58888763

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=3e-50  Score=372.52  Aligned_cols=309  Identities=20%  Similarity=0.240  Sum_probs=257.8

Q ss_pred             CcccchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCC-----CCCCCCccccccceEEEEEeC
Q 017336            1 MSSTAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-----QTPLFPRIFGHEAAGVVESVG   73 (373)
Q Consensus         1 m~~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-----~~~~~p~i~G~e~~G~V~~vG   73 (373)
                      |++|||+++.+++++  +++++.+.|+|+++||+|||.++|||++|++.+.|..     ....+|.++|||++|+|+++|
T Consensus         4 m~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG   83 (321)
T 3tqh_A            4 MKEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELG   83 (321)
T ss_dssp             -CEEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEEC
T ss_pred             cccceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeC
Confidence            789999999998887  8999999999999999999999999999999988732     245679999999999999999


Q ss_pred             CCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCc
Q 017336           74 EGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGC  153 (373)
Q Consensus        74 ~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~  153 (373)
                      +++++|++||||++.+..+                                             ...|+|+||+.++++.
T Consensus        84 ~~v~~~~~GdrV~~~~~~~---------------------------------------------~~~G~~aey~~v~~~~  118 (321)
T 3tqh_A           84 SDVNNVNIGDKVMGIAGFP---------------------------------------------DHPCCYAEYVCASPDT  118 (321)
T ss_dssp             TTCCSCCTTCEEEEECSTT---------------------------------------------TCCCCSBSEEEECGGG
T ss_pred             CCCCCCCCCCEEEEccCCC---------------------------------------------CCCCcceEEEEecHHH
Confidence            9999999999999663211                                             1136999999999999


Q ss_pred             eEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc
Q 017336          154 VAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF  232 (373)
Q Consensus       154 ~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G-~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l  232 (373)
                      ++++|+++++++||+++++++|||+++ +.++++++++|||+| +|++|++++|+|+.+|+ +|+++. +++++++++++
T Consensus       119 ~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~~l  195 (321)
T 3tqh_A          119 IIQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLKAL  195 (321)
T ss_dssp             EEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHHHH
T ss_pred             hccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHHHc
Confidence            999999999999999999999999997 789999999999997 59999999999999999 888886 56678999999


Q ss_pred             CCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEE
Q 017336          233 GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLK  312 (373)
Q Consensus       233 g~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~  312 (373)
                      |++.++++.+.+ .+.+.+     .++|+||||+|++ ....++++++++ |+++.+|......   .......+++++.
T Consensus       196 Ga~~~i~~~~~~-~~~~~~-----~g~D~v~d~~g~~-~~~~~~~~l~~~-G~iv~~g~~~~~~---~~~~~~~~~~~~~  264 (321)
T 3tqh_A          196 GAEQCINYHEED-FLLAIS-----TPVDAVIDLVGGD-VGIQSIDCLKET-GCIVSVPTITAGR---VIEVAKQKHRRAF  264 (321)
T ss_dssp             TCSEEEETTTSC-HHHHCC-----SCEEEEEESSCHH-HHHHHGGGEEEE-EEEEECCSTTHHH---HHHHHHHTTCEEE
T ss_pred             CCCEEEeCCCcc-hhhhhc-----cCCCEEEECCCcH-HHHHHHHhccCC-CEEEEeCCCCchh---hhhhhhhcceEEE
Confidence            999999887654 122211     4799999999984 459999999997 9999998654221   1111234778887


Q ss_pred             EEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336          313 GTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       313 g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                      ++..  ....++++++++++.++++++  .++++|+|+++++|++.+.+++. +|+++++.
T Consensus       265 ~~~~--~~~~~~~~~~~~l~~~g~l~~--~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~  321 (321)
T 3tqh_A          265 GLLK--QFNIEELHYLGKLVSEDKLRI--EISRIFQLSEAVTAHELLETGHVRGKLVFKVR  321 (321)
T ss_dssp             CCCC--CCCHHHHHHHHHHHHTTSSCC--CEEEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             EEec--CCCHHHHHHHHHHHHCCCccc--ccccEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence            7432  222356899999999998765  48999999999999999999885 59999864

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=2.5e-50  Score=377.21  Aligned_cols=314  Identities=22%  Similarity=0.296  Sum_probs=258.8

Q ss_pred             cccchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCC
Q 017336            2 SSTAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSD   78 (373)
Q Consensus         2 ~~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~   78 (373)
                      ++|||+++.+++++  +++++.+.|+|+++||+|||.+++||++|++.+.|.++ ...+|.++|||++|+|+++|+++++
T Consensus         2 m~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~   81 (349)
T 4a27_A            2 MEMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKG   81 (349)
T ss_dssp             CCEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCCS
T ss_pred             ceeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCCC
Confidence            58999999998864  89999999999999999999999999999999998765 3578999999999999999999999


Q ss_pred             CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336           79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  158 (373)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p  158 (373)
                      |++||||+..+                                                 ..|+|+||+.++++.++++|
T Consensus        82 ~~~GdrV~~~~-------------------------------------------------~~G~~aey~~v~~~~~~~iP  112 (349)
T 4a27_A           82 YEIGDRVMAFV-------------------------------------------------NYNAWAEVVCTPVEFVYKIP  112 (349)
T ss_dssp             CCTTCEEEEEC-------------------------------------------------SSCCSBSEEEEEGGGEEECC
T ss_pred             CCCCCEEEEec-------------------------------------------------CCCcceEEEEecHHHeEECC
Confidence            99999998542                                                 12699999999999999999


Q ss_pred             CCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee
Q 017336          159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF  237 (373)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v  237 (373)
                      +++++++||+++++++|||+++.+.++++++++|||+|+ |++|++++|+|+.+|..+|+++. ++++++.++ +|++.+
T Consensus       113 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~  190 (349)
T 4a27_A          113 DDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHL  190 (349)
T ss_dssp             TTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEE
Confidence            999999999999999999999888899999999999998 99999999999999654888886 667888888 999999


Q ss_pred             ecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCce---------------eeccc
Q 017336          238 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV---------------FMTKP  302 (373)
Q Consensus       238 i~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~---------------~~~~~  302 (373)
                      ++ .+.+  +.+.+++.+++++|+||||+|+ +.++.++++|+++ |+++.+|.......               .....
T Consensus       191 ~~-~~~~--~~~~~~~~~~~g~Dvv~d~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (349)
T 4a27_A          191 FD-RNAD--YVQEVKRISAEGVDIVLDCLCG-DNTGKGLSLLKPL-GTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNP  265 (349)
T ss_dssp             EE-TTSC--HHHHHHHHCTTCEEEEEEECC--------CTTEEEE-EEEEEEC-------------------------CH
T ss_pred             Ec-CCcc--HHHHHHHhcCCCceEEEECCCc-hhHHHHHHHhhcC-CEEEEECCCcccccccccccccccccccccccCH
Confidence            98 4444  8888998887799999999998 5568999999997 99999997532110               11222


Q ss_pred             hh-hcccceEEEEeccCCCC--------CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336          303 IN-VLNERTLKGTFFGNYKP--------RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       303 ~~-~~~~~~i~g~~~~~~~~--------~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                      .. +.++.++.|+.+..+..        .++++++++++.+|++.  ++++++|+|+++++|++.+.+++. +|++|+++
T Consensus       266 ~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~  343 (349)
T 4a27_A          266 IKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIK--PVVDSLWALEEVKEAMQRIHDRGNIGKLILDVE  343 (349)
T ss_dssp             HHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSCC--CCEEEEECGGGHHHHHHHHHTTCCSSEEEEETT
T ss_pred             HHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCCcc--ccccceECHHHHHHHHHHHHhCCCCceEEEecC
Confidence            22 33788888887532211        24588999999999874  568999999999999999998875 59999986


Q ss_pred             C
Q 017336          373 D  373 (373)
Q Consensus       373 ~  373 (373)
                      +
T Consensus       344 ~  344 (349)
T 4a27_A          344 K  344 (349)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=4.9e-50  Score=377.54  Aligned_cols=319  Identities=19%  Similarity=0.204  Sum_probs=261.3

Q ss_pred             CcccchhhhccCCCC---eEEEEeecCCCC--CCeEEEEEeeeecCcccccccccCCCC-CCCC---------ccccccc
Q 017336            1 MSSTAAAVAWEAGKP---LIIQDVEVAPPQ--AMEVRIKIKYTSLCRTDLYFWESKGQT-PLFP---------RIFGHEA   65 (373)
Q Consensus         1 m~~~~a~~~~~~~~~---~~~~~~~~p~~~--~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p---------~i~G~e~   65 (373)
                      |++|||+++.+++.+   +++++++.|+|+  ++||+|||.++|||++|++.+.|.++. ..+|         .++|||+
T Consensus         1 ~~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~   80 (364)
T 1gu7_A            1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG   80 (364)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred             CceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCcee
Confidence            889999999999875   899999999887  999999999999999999999886553 3456         8999999


Q ss_pred             eEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceee
Q 017336           66 AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSE  145 (373)
Q Consensus        66 ~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~  145 (373)
                      +|+|+++|++++.|++||||++.+.                                                +.|+|+|
T Consensus        81 ~G~V~~vG~~v~~~~vGdrV~~~~~------------------------------------------------~~G~~ae  112 (364)
T 1gu7_A           81 LFEVIKVGSNVSSLEAGDWVIPSHV------------------------------------------------NFGTWRT  112 (364)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEESSS------------------------------------------------CCCCSBS
T ss_pred             EEEEEEeCCCCCcCCCCCEEEecCC------------------------------------------------CCCcchh
Confidence            9999999999999999999986521                                                1369999


Q ss_pred             EEEEecCceEeCCC-----------CCCchhhhhcccchhhhhhhhhhccCCCCC-CEEEEECC-CHHHHHHHHHHHHcC
Q 017336          146 YTVVHSGCVAKINP-----------LAPLDKVCILSCGVSTGLGATLNVAKPERG-SSVAVFGL-GAVGLAAAEGARIAG  212 (373)
Q Consensus       146 ~~~v~~~~~~~~p~-----------~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~-~~vlI~G~-g~~G~~ai~la~~~g  212 (373)
                      |++++++.++++|+           ++++++||+++++++|||+++.+.++++++ ++|||+|+ |++|++++|+|+.+|
T Consensus       113 y~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~G  192 (364)
T 1gu7_A          113 HALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLN  192 (364)
T ss_dssp             EEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHT
T ss_pred             eEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCC
Confidence            99999999999998           899999999999999999998777799999 99999998 999999999999999


Q ss_pred             CcEEEEEcCChhH----HHHHHhcCCceeecCCCC-CccHHHHHHHHc--CC-CccEEEEccCChHhHHHHHHHhhcCCc
Q 017336          213 ASRIIGVDRSSKR----FEEAKKFGVTDFVNTSEH-DRPIQEVIAEMT--NG-GVDRSVECTGNIDNMISAFECVHDGWG  284 (373)
Q Consensus       213 ~~~V~~~~~~~~~----~~~~~~lg~~~vi~~~~~-~~~~~~~~~~~~--~~-~~d~vid~~g~~~~~~~~~~~l~~~~g  284 (373)
                      + +|+++.++.++    ++.++++|++.++++++. ..++.+.+++.+  ++ ++|+||||+|++... .++++++++ |
T Consensus       193 a-~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~~~-~~~~~l~~~-G  269 (364)
T 1gu7_A          193 F-NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSST-GIARKLNNN-G  269 (364)
T ss_dssp             C-EEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHH-HHHHTSCTT-C
T ss_pred             C-EEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchhHH-HHHHHhccC-C
Confidence            9 77777655443    678899999999987541 123777888887  44 899999999985544 889999997 9


Q ss_pred             EEEEEcCCCCCceeeccchhh-cccceEEEEeccCCCC------CCCHHHHHHHHHcCCCCCCCceeeee-ccccHHHHH
Q 017336          285 VAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKP------RTDLPSVVDMYMNKQLELEKFITHRI-PFSEINKAF  356 (373)
Q Consensus       285 ~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~------~~~~~~~~~~l~~~~l~~~~~~~~~~-~l~~~~~a~  356 (373)
                      +++.+|.... ....++...+ .+++++.|+....+..      .+.++++++++.+|++++.+..+..+ +++++++|+
T Consensus       270 ~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~  348 (364)
T 1gu7_A          270 LMLTYGGMSF-QPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELY  348 (364)
T ss_dssp             EEEECCCCSS-CCEEECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHH
T ss_pred             EEEEecCCCC-CCcccCHHHHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHH
Confidence            9999997652 2233333333 4889999876543211      13578899999999998775544444 456999999


Q ss_pred             HHHHcCC-ceeEEEec
Q 017336          357 EYMVKGE-GLRCIISM  371 (373)
Q Consensus       357 ~~l~~~~-~~k~v~~~  371 (373)
                      +.+.+++ .+|++|++
T Consensus       349 ~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          349 QDGVANSKDGKQLITY  364 (364)
T ss_dssp             HHHHHTGGGSCEEEEC
T ss_pred             HHHHhCCCCceEEEeC
Confidence            9998876 46999875

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=2.8e-49  Score=367.88  Aligned_cols=314  Identities=23%  Similarity=0.307  Sum_probs=264.1

Q ss_pred             cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCC-CC--CCCCccccccceEEEEEeCCCCCC
Q 017336            4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-QT--PLFPRIFGHEAAGVVESVGEGVSD   78 (373)
Q Consensus         4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-~~--~~~p~i~G~e~~G~V~~vG~~v~~   78 (373)
                      |||+++.+++.+  +++++.|.|+|+++||+|||.++|||++|++.+.|.+ +.  ..+|.++|||++|+|+++|+++++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD   81 (333)
T ss_dssp             CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCS
T ss_pred             cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCC
Confidence            899999987764  8899999999999999999999999999999988865 22  457999999999999999999999


Q ss_pred             CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336           79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  158 (373)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p  158 (373)
                      |++||||+..+.                                                ..|+|+||+.++++.++++|
T Consensus        82 ~~~GdrV~~~~~------------------------------------------------~~G~~aey~~v~~~~~~~iP  113 (333)
T 1wly_A           82 FTVGERVCTCLP------------------------------------------------PLGAYSQERLYPAEKLIKVP  113 (333)
T ss_dssp             CCTTCEEEECSS------------------------------------------------SCCCSBSEEEEEGGGCEECC
T ss_pred             CCCCCEEEEecC------------------------------------------------CCCcceeEEEecHHHcEeCC
Confidence            999999975420                                                02599999999999999999


Q ss_pred             CCCCchh--hhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc
Q 017336          159 PLAPLDK--VCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT  235 (373)
Q Consensus       159 ~~~~~~~--aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~  235 (373)
                      +++++++  ||+++++++|||+++.+.++++++++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|++
T Consensus       114 ~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~  192 (333)
T 1wly_A          114 KDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCH  192 (333)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCS
T ss_pred             CCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCC
Confidence            9999999  99999999999999877889999999999996 9999999999999999 899999999999999999999


Q ss_pred             eeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccch--hhccc--ce
Q 017336          236 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI--NVLNE--RT  310 (373)
Q Consensus       236 ~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~--~~~~~--~~  310 (373)
                      .++++.+.+  +.+.+.+.+.+ ++|++||++|+ ..++.++++++++ |+++.+|..... ...++..  .+.++  ++
T Consensus       193 ~~~d~~~~~--~~~~i~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~-~~~~~~~~~~~~~~~~~~  267 (333)
T 1wly_A          193 HTINYSTQD--FAEVVREITGGKGVDVVYDSIGK-DTLQKSLDCLRPR-GMCAAYGHASGV-ADPIRVVEDLGVRGSLFI  267 (333)
T ss_dssp             EEEETTTSC--HHHHHHHHHTTCCEEEEEECSCT-TTHHHHHHTEEEE-EEEEECCCTTCC-CCCCCHHHHTTTTTSCEE
T ss_pred             EEEECCCHH--HHHHHHHHhCCCCCeEEEECCcH-HHHHHHHHhhccC-CEEEEEecCCCC-cCCCChhHhhhhcCCcEE
Confidence            888877655  78888888766 89999999998 8899999999997 999999976532 1222222  23477  88


Q ss_pred             EEEEeccCCCC----CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecCC
Q 017336          311 LKGTFFGNYKP----RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED  373 (373)
Q Consensus       311 i~g~~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~~  373 (373)
                      +.|+.......    .+.++++++++.++++.  ++++++|+|+++++|++.+.+++. +|+++++.|
T Consensus       268 i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  333 (333)
T 1wly_A          268 TRPALWHYMSNRSEIDEGSKCLFDAVKAGVLH--SSVAKTFPLREAAAAHKYMGGRQTIGSIVLLPQA  333 (333)
T ss_dssp             ECCCGGGGSCSHHHHHHHHHHHHHHHHTTSCC--CCEEEEEEGGGHHHHHHHHHHCSCCSEEEEETTC
T ss_pred             EEEeehhhccCHHHHHHHHHHHHHHHHCCCcC--CCcceEEeHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence            88875421111    12578899999999875  458999999999999999988764 699998865

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.2e-48  Score=363.89  Aligned_cols=310  Identities=23%  Similarity=0.342  Sum_probs=261.1

Q ss_pred             ccchhhhccCCCC--eEE-EEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCC
Q 017336            3 STAAAVAWEAGKP--LII-QDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSD   78 (373)
Q Consensus         3 ~~~a~~~~~~~~~--~~~-~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~   78 (373)
                      +|||+++.+++.+  +++ ++++.|+|+++||+|||.++|||++|++.+.|.++ ...+|.++|||++|+|+++|++++.
T Consensus        29 ~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v~~  108 (351)
T 1yb5_A           29 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA  108 (351)
T ss_dssp             EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTT
T ss_pred             eEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEECCCCCC
Confidence            4899999887764  788 89999999999999999999999999999888654 3467999999999999999999999


Q ss_pred             CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336           79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  158 (373)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p  158 (373)
                      |++||||++.+.                                                ..|+|+||++++++.++++|
T Consensus       109 ~~vGdrV~~~~~------------------------------------------------~~G~~aey~~v~~~~~~~~P  140 (351)
T 1yb5_A          109 FKKGDRVFTSST------------------------------------------------ISGGYAEYALAADHTVYKLP  140 (351)
T ss_dssp             CCTTCEEEESCC------------------------------------------------SSCSSBSEEEEEGGGEEECC
T ss_pred             CCCCCEEEEeCC------------------------------------------------CCCcceeEEEECHHHeEECC
Confidence            999999985421                                                12699999999999999999


Q ss_pred             CCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee
Q 017336          159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF  237 (373)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v  237 (373)
                      +++++++||+++++++|||+++.+.++++++++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|++.+
T Consensus       141 ~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~  219 (351)
T 1yb5_A          141 EKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEV  219 (351)
T ss_dssp             TTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEE
T ss_pred             CCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcCCCEE
Confidence            999999999999999999999877899999999999997 9999999999999999 89999999999999999999998


Q ss_pred             ecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEe
Q 017336          238 VNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTF  315 (373)
Q Consensus       238 i~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~  315 (373)
                      +++.+.+  +.+.+.+.+++ ++|++||++|+ ..+..++++++++ |+++.+|... .  ..++... +.+++++.|+.
T Consensus       220 ~d~~~~~--~~~~~~~~~~~~~~D~vi~~~G~-~~~~~~~~~l~~~-G~iv~~g~~~-~--~~~~~~~~~~~~~~i~g~~  292 (351)
T 1yb5_A          220 FNHREVN--YIDKIKKYVGEKGIDIIIEMLAN-VNLSKDLSLLSHG-GRVIVVGSRG-T--IEINPRDTMAKESSIIGVT  292 (351)
T ss_dssp             EETTSTT--HHHHHHHHHCTTCEEEEEESCHH-HHHHHHHHHEEEE-EEEEECCCCS-C--EEECTHHHHTTTCEEEECC
T ss_pred             EeCCCch--HHHHHHHHcCCCCcEEEEECCCh-HHHHHHHHhccCC-CEEEEEecCC-C--CccCHHHHHhCCcEEEEEE
Confidence            8887655  88888888876 89999999998 5788999999997 9999999642 2  2233332 34889999986


Q ss_pred             ccCCCCCCCH----HHHHHHHHcCCCCCCCceeeeeccccHHHHHHH-HHcCC-ceeEEEec
Q 017336          316 FGNYKPRTDL----PSVVDMYMNKQLELEKFITHRIPFSEINKAFEY-MVKGE-GLRCIISM  371 (373)
Q Consensus       316 ~~~~~~~~~~----~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~-l~~~~-~~k~v~~~  371 (373)
                      +.... .+++    +.+.+++.++++.  ++++++|+|+++++|++. +.+++ .+|+++++
T Consensus       293 ~~~~~-~~~~~~~~~~l~~~~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          293 LFSST-KEEFQQYAAALQAGMEIGWLK--PVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             GGGCC-HHHHHHHHHHHHHHHHHTCCC--CCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             eecCC-HHHHHHHHHHHHHHHHCCCcc--CccceEEcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            43321 1223    3455667778654  568899999999999998 55444 56999864

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=3e-50  Score=376.77  Aligned_cols=313  Identities=13%  Similarity=0.178  Sum_probs=257.3

Q ss_pred             ccchhhhc--cC---CCCeEEEEe---------ecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceE
Q 017336            3 STAAAVAW--EA---GKPLIIQDV---------EVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAG   67 (373)
Q Consensus         3 ~~~a~~~~--~~---~~~~~~~~~---------~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G   67 (373)
                      +|||+++.  ++   .+.++++++         +.|+|+++||+|||.+++||++|++.+.|.++ ...+|.++|||++|
T Consensus        10 ~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G   89 (349)
T 3pi7_A           10 EMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGFEGVG   89 (349)
T ss_dssp             EEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTTSBCCSEEEE
T ss_pred             hheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCCCCccceEEE
Confidence            39999998  33   334777777         99999999999999999999999999998765 34689999999999


Q ss_pred             EEEEeCCCC-CCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeE
Q 017336           68 VVESVGEGV-SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEY  146 (373)
Q Consensus        68 ~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~  146 (373)
                      +|+++|++| ++|++||||++..                           |                   ....|+|+||
T Consensus        90 ~V~~vG~~v~~~~~vGdrV~~~~---------------------------g-------------------~~~~G~~aey  123 (349)
T 3pi7_A           90 TIVAGGDEPYAKSLVGKRVAFAT---------------------------G-------------------LSNWGSWAEY  123 (349)
T ss_dssp             EEEEECSSHHHHHHTTCEEEEEC---------------------------T-------------------TSSCCSSBSE
T ss_pred             EEEEECCCccCCCCCCCEEEEec---------------------------c-------------------CCCCccceee
Confidence            999999999 9999999999652                           1                   1123699999


Q ss_pred             EEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCC-CEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCChh
Q 017336          147 TVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG-SSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSK  224 (373)
Q Consensus       147 ~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~-~~vlI~G-~g~~G~~ai~la~~~g~~~V~~~~~~~~  224 (373)
                      +.++++.++++|+++++++||++++.++|||++ .+.++ +++ ++|||+| +|++|++++|+|+.+|+ +|++++++++
T Consensus       124 ~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~-~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~  200 (349)
T 3pi7_A          124 AVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAM-FDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDE  200 (349)
T ss_dssp             EEEEGGGEEECCTTCCC--GGGSSHHHHHHHHH-HHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESCGG
T ss_pred             EeechHHeEECCCCCCHHHHhhccccHHHHHHH-HHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            999999999999999999999999999999964 56666 666 7888885 59999999999999999 8999999999


Q ss_pred             HHHHHHhcCCceeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-
Q 017336          225 RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-  302 (373)
Q Consensus       225 ~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-  302 (373)
                      ++++++++|++.++++.+.+  +.+.+++.+++ ++|++|||+|+ ..+..++++|+++ |+++.+|..... ...+.. 
T Consensus       201 ~~~~~~~~Ga~~~~~~~~~~--~~~~v~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~  275 (349)
T 3pi7_A          201 QIALLKDIGAAHVLNEKAPD--FEATLREVMKAEQPRIFLDAVTG-PLASAIFNAMPKR-ARWIIYGRLDPD-ATVIREP  275 (349)
T ss_dssp             GHHHHHHHTCSEEEETTSTT--HHHHHHHHHHHHCCCEEEESSCH-HHHHHHHHHSCTT-CEEEECCCSCCS-CCCCSCT
T ss_pred             HHHHHHHcCCCEEEECCcHH--HHHHHHHHhcCCCCcEEEECCCC-hhHHHHHhhhcCC-CEEEEEeccCCC-CCCCCch
Confidence            99999999999999987765  88999998887 99999999998 5568999999997 999999976532 223333 


Q ss_pred             hh-hcccceEEEEeccCCCC------CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336          303 IN-VLNERTLKGTFFGNYKP------RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  371 (373)
Q Consensus       303 ~~-~~~~~~i~g~~~~~~~~------~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~  371 (373)
                      .. +.+++++.|+..+.+..      .+.++++++++.+|++.  ++++++|+|+++++|++.+.++..+|++|++
T Consensus       276 ~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~gKvvl~p  349 (349)
T 3pi7_A          276 GQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWS--TDVTAVVPLAEAIAWVPAELTKPNGKVFIRP  349 (349)
T ss_dssp             HHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCC--C-CCEEEEHHHHHHHHHHHHTSSSSCEEEEC
T ss_pred             hhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCcc--cccceEEcHHHHHHHHHHHhCCCCceEEEeC
Confidence            32 34999999987643211      23567788888899874  5588999999999999966665567999874

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.6e-48  Score=361.95  Aligned_cols=312  Identities=19%  Similarity=0.250  Sum_probs=263.4

Q ss_pred             cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 017336            4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   81 (373)
Q Consensus         4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   81 (373)
                      |||+++..++.+  +++++.+.|+|+++||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|++++.|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~   81 (327)
T 1qor_A            2 ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKA   81 (327)
T ss_dssp             CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCT
T ss_pred             cEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence            899999987764  889999999999999999999999999999999887655568999999999999999999999999


Q ss_pred             CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336           82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  161 (373)
Q Consensus        82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~  161 (373)
                      ||||. .+                           |                    ...|+|+||+.++++.++++|+++
T Consensus        82 GdrV~-~~---------------------------g--------------------~~~G~~aey~~v~~~~~~~iP~~l  113 (327)
T 1qor_A           82 GDRVV-YA---------------------------Q--------------------SALGAYSSVHNIIADKAAILPAAI  113 (327)
T ss_dssp             TCEEE-ES---------------------------C--------------------CSSCCSBSEEEEEGGGEEECCTTS
T ss_pred             CCEEE-EC---------------------------C--------------------CCCceeeeEEEecHHHcEECCCCC
Confidence            99994 21                           0                    012699999999999999999999


Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      ++++||+++++++|||+++.+.++++++++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|++.++++
T Consensus       114 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~~~  192 (327)
T 1qor_A          114 SFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVINY  192 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEEC
Confidence            999999999999999999877889999999999995 9999999999999999 89999999999999999999988887


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cc-cceEEEEecc
Q 017336          241 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LN-ERTLKGTFFG  317 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~-~~~i~g~~~~  317 (373)
                      .+.+  +.+.+.+.+.+ ++|++||++| ...++.++++|+++ |+++.+|..... ...++...+ .+ ++++.+...+
T Consensus       193 ~~~~--~~~~~~~~~~~~~~D~vi~~~g-~~~~~~~~~~l~~~-G~iv~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  267 (327)
T 1qor_A          193 REED--LVERLKEITGGKKVRVVYDSVG-RDTWERSLDCLQRR-GLMVSFGNSSGA-VTGVNLGILNQKGSLYVTRPSLQ  267 (327)
T ss_dssp             TTSC--HHHHHHHHTTTCCEEEEEECSC-GGGHHHHHHTEEEE-EEEEECCCTTCC-CCCBCTHHHHHTTSCEEECCCHH
T ss_pred             CCcc--HHHHHHHHhCCCCceEEEECCc-hHHHHHHHHHhcCC-CEEEEEecCCCC-CCccCHHHHhhccceEEEccchh
Confidence            7655  88888888766 8999999999 48899999999997 999999986532 122222223 35 6777654332


Q ss_pred             CCC-----CCCCHHHHHHHHHcCCCCCCCcee--eeeccccHHHHHHHHHcCC-ceeEEEec
Q 017336          318 NYK-----PRTDLPSVVDMYMNKQLELEKFIT--HRIPFSEINKAFEYMVKGE-GLRCIISM  371 (373)
Q Consensus       318 ~~~-----~~~~~~~~~~~l~~~~l~~~~~~~--~~~~l~~~~~a~~~l~~~~-~~k~v~~~  371 (373)
                      .+.     ..+.++++++++.++++.+  .++  ++|+|+++++|++.+.+++ .+|+++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          268 GYITTREELTEASNELFSLIASGVIKV--DVAEQQKYPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             HHCCSHHHHHHHHHHHHHHHHTTSSCC--CCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             hhcCCHHHHHHHHHHHHHHHHCCCccc--ccccCcEEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            211     1234788999999998764  478  8999999999999998876 46988864

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=4e-49  Score=370.15  Aligned_cols=312  Identities=21%  Similarity=0.310  Sum_probs=254.3

Q ss_pred             ccchhhhccCCCC---eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCC
Q 017336            3 STAAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSD   78 (373)
Q Consensus         3 ~~~a~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~   78 (373)
                      +|||+++.+++.+   +++++.+.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++++.
T Consensus        26 ~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v~~  105 (357)
T 1zsy_A           26 RVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTG  105 (357)
T ss_dssp             CEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEEEECTTCCS
T ss_pred             hhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEEEeCCCCCC
Confidence            4899999998885   889999999999999999999999999999999886654 357999999999999999999999


Q ss_pred             CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336           79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  158 (373)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p  158 (373)
                      |++||||++.+.                                                +.|+|+||++++++.++++|
T Consensus       106 ~~vGdrV~~~~~------------------------------------------------~~G~~aey~~v~~~~~~~iP  137 (357)
T 1zsy_A          106 LKPGDWVIPANA------------------------------------------------GLGTWRTEAVFSEEALIQVP  137 (357)
T ss_dssp             CCTTCEEEESSS------------------------------------------------CSCCSBSEEEEEGGGEEEEC
T ss_pred             CCCCCEEEEcCC------------------------------------------------CCccceeEEecCHHHcEECC
Confidence            999999986421                                                13699999999999999999


Q ss_pred             CCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCC-h---hHHHHHHhcC
Q 017336          159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS-S---KRFEEAKKFG  233 (373)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~-~---~~~~~~~~lg  233 (373)
                      +++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +++++.++ +   +++++++++|
T Consensus       138 ~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~~~~lG  216 (357)
T 1zsy_A          138 SDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSDRLKSLG  216 (357)
T ss_dssp             SSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEECCCSCHHHHHHHHHHTT
T ss_pred             CCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCC-EEEEEecCccchHHHHHHHHhcC
Confidence            999999999999889999999878889999999999998 9999999999999999 55555433 2   3678899999


Q ss_pred             CceeecCCCCCccHHHHHHHHcCC--CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccce
Q 017336          234 VTDFVNTSEHDRPIQEVIAEMTNG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERT  310 (373)
Q Consensus       234 ~~~vi~~~~~~~~~~~~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~  310 (373)
                      ++.++++++.   ..+.+.+.+.+  ++|+||||+|++ ....++++++++ |+++.+|..... ...++...+ .++++
T Consensus       217 a~~vi~~~~~---~~~~~~~~~~~~~~~Dvvid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~  290 (357)
T 1zsy_A          217 AEHVITEEEL---RRPEMKNFFKDMPQPRLALNCVGGK-SSTELLRQLARG-GTMVTYGGMAKQ-PVVASVSLLIFKDLK  290 (357)
T ss_dssp             CSEEEEHHHH---HSGGGGGTTSSSCCCSEEEESSCHH-HHHHHHTTSCTT-CEEEECCCCTTC-CBCCCHHHHHHSCCE
T ss_pred             CcEEEecCcc---hHHHHHHHHhCCCCceEEEECCCcH-HHHHHHHhhCCC-CEEEEEecCCCC-CCCCCHHHHHhcCce
Confidence            9999876431   11234445544  599999999984 456789999997 999999865422 223333333 38999


Q ss_pred             EEEEeccCCC-------CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          311 LKGTFFGNYK-------PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       311 i~g~~~~~~~-------~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      +.|+....+.       ..+.++++++++.+|++++.  +.++|+|+++++|++.+.+++. +|+++++
T Consensus       291 i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          291 LRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAP--ACSQVPLQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             EEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCC--CEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             EEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCc--cceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence            9998654221       01346789999999988765  5689999999999999988774 5999874

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=3.1e-48  Score=364.53  Aligned_cols=314  Identities=18%  Similarity=0.237  Sum_probs=264.6

Q ss_pred             ccchhhhccCCC----CeEE-EEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCC
Q 017336            3 STAAAVAWEAGK----PLII-QDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGV   76 (373)
Q Consensus         3 ~~~a~~~~~~~~----~~~~-~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v   76 (373)
                      +|||+++.+++.    .+++ +++|.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++|
T Consensus        23 ~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~vG~~V  102 (362)
T 2c0c_A           23 MMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSA  102 (362)
T ss_dssp             EEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEEECTTG
T ss_pred             hceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEEECCCc
Confidence            599999999875    3888 999999999999999999999999999999886643 4689999999999999999999


Q ss_pred             C-CCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceE
Q 017336           77 S-DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVA  155 (373)
Q Consensus        77 ~-~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~  155 (373)
                      + .|++||||++..                                                  .|+|+||+.++++.++
T Consensus       103 ~~~~~vGdrV~~~~--------------------------------------------------~G~~aey~~v~~~~~~  132 (362)
T 2c0c_A          103 SARYTVGQAVAYMA--------------------------------------------------PGSFAEYTVVPASIAT  132 (362)
T ss_dssp             GGTCCTTCEEEEEC--------------------------------------------------SCCSBSEEEEEGGGCE
T ss_pred             cCCCCCCCEEEEcc--------------------------------------------------CCcceeEEEEcHHHeE
Confidence            9 999999998541                                                  2599999999999999


Q ss_pred             eCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC
Q 017336          156 KINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  234 (373)
Q Consensus       156 ~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~  234 (373)
                      ++|+. + .++|+++++++|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|+
T Consensus       133 ~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga  209 (362)
T 2c0c_A          133 PVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSLGC  209 (362)
T ss_dssp             ECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTC
T ss_pred             ECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHcCC
Confidence            99996 3 4677888899999999888889999999999995 9999999999999999 89999999999999999999


Q ss_pred             ceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCc------ee---eccchhh
Q 017336          235 TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA------VF---MTKPINV  305 (373)
Q Consensus       235 ~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~------~~---~~~~~~~  305 (373)
                      +.++++.+.+  +.+.+++.+++++|++|||+|+ ..++.++++++++ |+++.+|......      .+   .+....+
T Consensus       210 ~~~~~~~~~~--~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~  285 (362)
T 2c0c_A          210 DRPINYKTEP--VGTVLKQEYPEGVDVVYESVGG-AMFDLAVDALATK-GRLIVIGFISGYQTPTGLSPVKAGTLPAKLL  285 (362)
T ss_dssp             SEEEETTTSC--HHHHHHHHCTTCEEEEEECSCT-HHHHHHHHHEEEE-EEEEECCCGGGTTSSSCCCCCCCTTHHHHHH
T ss_pred             cEEEecCChh--HHHHHHHhcCCCCCEEEECCCH-HHHHHHHHHHhcC-CEEEEEeCCCCcCcccccccccccccHHHHH
Confidence            9999887655  7788887775589999999998 7889999999997 9999999754221      00   1112223


Q ss_pred             cccceEEEEeccCCC--CCCCHHHHHHHHHcCCCCCCCc------eeeeeccccHHHHHHHHHcCC-ceeEEEecCC
Q 017336          306 LNERTLKGTFFGNYK--PRTDLPSVVDMYMNKQLELEKF------ITHRIPFSEINKAFEYMVKGE-GLRCIISMED  373 (373)
Q Consensus       306 ~~~~~i~g~~~~~~~--~~~~~~~~~~~l~~~~l~~~~~------~~~~~~l~~~~~a~~~l~~~~-~~k~v~~~~~  373 (373)
                      .+++++.|+....+.  ..+.++++++++.+|++++...      +.+.|+|+++++|++.+.+++ .+|++++++|
T Consensus       286 ~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  362 (362)
T 2c0c_A          286 KKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELPH  362 (362)
T ss_dssp             HHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECCC
T ss_pred             hhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCHHHHHHHHHHHHcCCCCceEEEEcCC
Confidence            488999998754432  1235889999999998876532      236689999999999998876 4699999875

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=4.3e-49  Score=365.37  Aligned_cols=312  Identities=17%  Similarity=0.183  Sum_probs=258.9

Q ss_pred             cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 017336            4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |||+++.+++++  +++++++.|+|+++||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|  ++.|+
T Consensus         1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~~   78 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRFH   78 (324)
T ss_dssp             CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTCC
T ss_pred             CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCCC
Confidence            799999999986  889999999999999999999999999999999987653 5789999999999999998  57899


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||||++.+   |..                     |.                   ...|+|+||+.++++.++++|++
T Consensus        79 vGdrV~~~~---~~~---------------------g~-------------------~~~G~~aey~~v~~~~~~~iP~~  115 (324)
T 3nx4_A           79 AGQEVLLTG---WGV---------------------GE-------------------NHWGGLAERARVKGDWLVALPAG  115 (324)
T ss_dssp             TTCEEEEEC---TTB---------------------TT-------------------TBCCSSBSEEEECGGGCEECCTT
T ss_pred             CCCEEEEcc---ccc---------------------CC-------------------CCCCceeeEEecCHHHcEECCCC
Confidence            999999652   100                     11                   12369999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhh--hccCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce
Q 017336          161 APLDKVCILSCGVSTGLGATL--NVAKPERGS-SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  236 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~--~~~~~~~~~-~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~  236 (373)
                      +++++||++++.+.|||+++.  ...++++++ +|||+|+ |++|++++|+|+.+|+ +|++++++++|+++++++|+++
T Consensus       116 ~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~  194 (324)
T 3nx4_A          116 LSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGANR  194 (324)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCE
Confidence            999999999999999998875  345666633 4999998 9999999999999999 8999999999999999999999


Q ss_pred             eecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEe
Q 017336          237 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTF  315 (373)
Q Consensus       237 vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~  315 (373)
                      ++++++.+  .   +++.+++++|++||++|+ +.++.++++++++ |+++.+|..... ...++... +.+++++.|+.
T Consensus       195 vi~~~~~~--~---~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~~~g~~  266 (324)
T 3nx4_A          195 ILSRDEFA--E---SRPLEKQLWAGAIDTVGD-KVLAKVLAQMNYG-GCVAACGLAGGF-ALPTTVMPFILRNVRLQGVD  266 (324)
T ss_dssp             EEEGGGSS--C---CCSSCCCCEEEEEESSCH-HHHHHHHHTEEEE-EEEEECCCTTCS-EEEEESHHHHHHCCEEEECC
T ss_pred             EEecCCHH--H---HHhhcCCCccEEEECCCc-HHHHHHHHHHhcC-CEEEEEecCCCC-CCCCCHHHHhhcCeEEEEEe
Confidence            99876644  1   444555689999999998 5899999999997 999999987532 23333333 34899999986


Q ss_pred             ccCCCC---CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336          316 FGNYKP---RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       316 ~~~~~~---~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                      ......   .+.++++++++.+|++.  +. +++|+|+++++|++.+.+++. +|++++++
T Consensus       267 ~~~~~~~~~~~~~~~~~~l~~~g~l~--~~-~~~~~l~~~~~A~~~~~~~~~~gkvvv~~~  324 (324)
T 3nx4_A          267 SVMTPPARRAEAWARLVKDLPESFYA--QA-ATEITLADAPKFADAIINNQVQGRTLVKIK  324 (324)
T ss_dssp             STTCCHHHHHHHHHHHHHHSCHHHHH--HH-EEEEEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             ccccChHHHHHHHHHHHHHHHcCCCC--CC-ceeEeHHHHHHHHHHHHhCCCCceEEEecC
Confidence            433211   13467788888888764  34 899999999999999999886 59999874

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=3.7e-47  Score=354.10  Aligned_cols=307  Identities=16%  Similarity=0.211  Sum_probs=258.9

Q ss_pred             ccchhhhcc------CCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCcccccc----ceEEEEEe
Q 017336            3 STAAAVAWE------AGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE----AAGVVESV   72 (373)
Q Consensus         3 ~~~a~~~~~------~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e----~~G~V~~v   72 (373)
                      +|||+++..      ..+.++++++|.|+|+++||||||.+++||++|+..+.+.. ...+|.++|||    ++|+|++ 
T Consensus         7 ~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~-~~~~p~~~G~e~g~~~~G~V~~-   84 (336)
T 4b7c_A            7 INRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDAR-SYIPPVGIGEVMRALGVGKVLV-   84 (336)
T ss_dssp             EEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSC-CSSCCCCTTSBCCCEEEEEEEE-
T ss_pred             cccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhccc-ccCCCCCCCcccCCceEEEEEe-
Confidence            589999986      22349999999999999999999999999999988776633 23457777777    7999999 


Q ss_pred             CCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC
Q 017336           73 GEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG  152 (373)
Q Consensus        73 G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~  152 (373)
                       ++++.|++||||++.                                                    |+|+||+.++++
T Consensus        85 -~~v~~~~vGdrV~~~----------------------------------------------------G~~aey~~v~~~  111 (336)
T 4b7c_A           85 -SKHPGFQAGDYVNGA----------------------------------------------------LGVQDYFIGEPK  111 (336)
T ss_dssp             -ECSTTCCTTCEEEEE----------------------------------------------------CCSBSEEEECCT
T ss_pred             -cCCCCCCCCCEEecc----------------------------------------------------CCceEEEEechH
Confidence             458899999999843                                                    589999999999


Q ss_pred             ceEeCCCCCCchhh--hhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH
Q 017336          153 CVAKINPLAPLDKV--CILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA  229 (373)
Q Consensus       153 ~~~~~p~~~~~~~a--a~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~  229 (373)
                      .++++|+++++.++  ++++++++|||+++.+.++++++++|||+|+ |++|++++|+++..|+ +|+++++++++++.+
T Consensus       112 ~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~  190 (336)
T 4b7c_A          112 GFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFL  190 (336)
T ss_dssp             TCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred             HeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence            99999999977776  7889999999999878899999999999998 9999999999999999 899999999999999


Q ss_pred             -HhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCC-----ceeeccch
Q 017336          230 -KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-----AVFMTKPI  303 (373)
Q Consensus       230 -~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-----~~~~~~~~  303 (373)
                       +++|++.++++.+.+  +.+.+.+.+++++|++||++|+ +.+..++++++++ |+++.+|.....     ....++..
T Consensus       191 ~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~  266 (336)
T 4b7c_A          191 VEELGFDGAIDYKNED--LAAGLKRECPKGIDVFFDNVGG-EILDTVLTRIAFK-ARIVLCGAISQYNNKEAVRGPANYL  266 (336)
T ss_dssp             HHTTCCSEEEETTTSC--HHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEECCCGGGGC------CCTTTT
T ss_pred             HHHcCCCEEEECCCHH--HHHHHHHhcCCCceEEEECCCc-chHHHHHHHHhhC-CEEEEEeecccccCCcccccchhHH
Confidence             899999999887765  8888988886699999999997 7899999999997 999999976521     11222323


Q ss_pred             h-hcccceEEEEeccCCCC--CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          304 N-VLNERTLKGTFFGNYKP--RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       304 ~-~~~~~~i~g~~~~~~~~--~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      . +.+++++.|+..+.+..  .+.++++++++.+|++++.  +..+|+|+++++|++.+.+++. +|++|++
T Consensus       267 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          267 SLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSR--EDIVEGLETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             HHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCC--EEEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccc--eeeecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            2 34899999987654321  1467889999999988776  4556899999999999998875 5999875

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.8e-47  Score=353.69  Aligned_cols=315  Identities=18%  Similarity=0.201  Sum_probs=247.5

Q ss_pred             CcccchhhhccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCC
Q 017336            1 MSSTAAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVS   77 (373)
Q Consensus         1 m~~~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~   77 (373)
                      |++|||+++.+++.  .+++++.|.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++  +++
T Consensus         1 m~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~   78 (328)
T 1xa0_A            1 MSAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHP   78 (328)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSS
T ss_pred             CCcceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCC
Confidence            88999999999874  3789999999999999999999999999999998886542 457999999999999995  568


Q ss_pred             CCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeC
Q 017336           78 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI  157 (373)
Q Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~  157 (373)
                      .|++||||++....                        .|.                   ...|+|+||++++++.++++
T Consensus        79 ~~~vGdrV~~~~~~------------------------~g~-------------------~~~G~~aey~~v~~~~~~~~  115 (328)
T 1xa0_A           79 RFREGDEVIATGYE------------------------IGV-------------------THFGGYSEYARLHGEWLVPL  115 (328)
T ss_dssp             SCCTTCEEEEESTT------------------------BTT-------------------TBCCSSBSEEEECGGGCEEC
T ss_pred             CCCCCCEEEEcccc------------------------CCC-------------------CCCccceeEEEechHHeEEC
Confidence            89999999865210                        010                   11369999999999999999


Q ss_pred             CCCCCchhhhhcccchhhhhhhhh--hccCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC
Q 017336          158 NPLAPLDKVCILSCGVSTGLGATL--NVAKPERGS-SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG  233 (373)
Q Consensus       158 p~~~~~~~aa~~~~~~~ta~~~l~--~~~~~~~~~-~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg  233 (373)
                      |+++++++||++++++.|||.++.  ..+++++++ +|||+|+ |++|++++|+|+.+|+ +|++++++++++++++++|
T Consensus       116 P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lG  194 (328)
T 1xa0_A          116 PKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLG  194 (328)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTT
T ss_pred             CCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcC
Confidence            999999999999999999998764  346788886 9999997 9999999999999999 7999999999999999999


Q ss_pred             CceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEE
Q 017336          234 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLK  312 (373)
Q Consensus       234 ~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~  312 (373)
                      ++.++++.+.+   .+.+++.+++++|++||++|+ +.+..++++++++ |+++.+|.... ....++... +.+++++.
T Consensus       195 a~~~i~~~~~~---~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~-~~~~~~~~~~~~~~~~i~  268 (328)
T 1xa0_A          195 AKEVLAREDVM---AERIRPLDKQRWAAAVDPVGG-RTLATVLSRMRYG-GAVAVSGLTGG-AEVPTTVHPFILRGVSLL  268 (328)
T ss_dssp             CSEEEECC------------CCSCCEEEEEECSTT-TTHHHHHHTEEEE-EEEEECSCCSS-SCCCCCSHHHHHTTCEEE
T ss_pred             CcEEEecCCcH---HHHHHHhcCCcccEEEECCcH-HHHHHHHHhhccC-CEEEEEeecCC-CCCCCchhhhhhcCceEE
Confidence            99999876532   223444454589999999998 6889999999997 99999998653 222333333 34889999


Q ss_pred             EEeccCCCC---CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          313 GTFFGNYKP---RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       313 g~~~~~~~~---~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      |+.......   .+.++.+++++.++ +  ++ ++++|+|+++++|++.+.+++. +|+++++
T Consensus       269 g~~~~~~~~~~~~~~~~~~~~~~~~g-l--~~-~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  327 (328)
T 1xa0_A          269 GIDSVYCPMDLRLRIWERLAGDLKPD-L--ER-IAQEISLAELPQALKRILRGELRGRTVVRL  327 (328)
T ss_dssp             ECCSSSCCHHHHHHHHHHHHTTTCCC-H--HH-HEEEEEGGGHHHHHHHHHHTCCCSEEEEEC
T ss_pred             EEecccCCHHHHHHHHHHHHHHHHcC-C--ce-eeeEeCHHHHHHHHHHHHcCCCCCeEEEEe
Confidence            874322110   01234444444444 3  23 4699999999999999988774 6999876

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=8.9e-46  Score=347.53  Aligned_cols=313  Identities=16%  Similarity=0.199  Sum_probs=260.4

Q ss_pred             Ccccchhhh-ccC---CC----CeEEEEeecCCC-CCCeEEEEEeeeecCccccccccc----CCC-CCCCCccccccce
Q 017336            1 MSSTAAAVA-WEA---GK----PLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWES----KGQ-TPLFPRIFGHEAA   66 (373)
Q Consensus         1 m~~~~a~~~-~~~---~~----~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g----~~~-~~~~p~i~G~e~~   66 (373)
                      |++|||+++ ..+   +.    .+++++++.|+| +++||+|||.++|||++|+..+.+    .+. ...+|.++|||++
T Consensus         6 ~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~E~~   85 (357)
T 2zb4_A            6 AMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGI   85 (357)
T ss_dssp             CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEEEEE
T ss_pred             cccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccccccEE
Confidence            567999999 454   33    389999999999 999999999999999999887665    222 3457889999999


Q ss_pred             EEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeE
Q 017336           67 GVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEY  146 (373)
Q Consensus        67 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~  146 (373)
                      |+|++  ++++.|++||||++.                                                   .|+|+||
T Consensus        86 G~V~~--~~v~~~~vGdrV~~~---------------------------------------------------~G~~aey  112 (357)
T 2zb4_A           86 GIIEE--SKHTNLTKGDFVTSF---------------------------------------------------YWPWQTK  112 (357)
T ss_dssp             EEEEE--ECSTTCCTTCEEEEE---------------------------------------------------EEESBSE
T ss_pred             EEEEe--cCCCCCCCCCEEEec---------------------------------------------------CCCcEEE
Confidence            99999  889999999999854                                                   1589999


Q ss_pred             EEEecCceEeCCCCC-----CchhhhhcccchhhhhhhhhhccCCCCC--CEEEEECC-CHHHHHHHHHHHHcCCcEEEE
Q 017336          147 TVVHSGCVAKINPLA-----PLDKVCILSCGVSTGLGATLNVAKPERG--SSVAVFGL-GAVGLAAAEGARIAGASRIIG  218 (373)
Q Consensus       147 ~~v~~~~~~~~p~~~-----~~~~aa~~~~~~~ta~~~l~~~~~~~~~--~~vlI~G~-g~~G~~ai~la~~~g~~~V~~  218 (373)
                      ++++++.++++|+++     +++ +++++++++|||+++.+.++++++  ++|||+|+ |++|++++|+++..|+.+|++
T Consensus       113 ~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~  191 (357)
T 2zb4_A          113 VILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVG  191 (357)
T ss_dssp             EEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEE
T ss_pred             EEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEE
Confidence            999999999999999     544 778888999999998788999999  99999998 999999999999999878999


Q ss_pred             EcCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCC-c
Q 017336          219 VDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-A  296 (373)
Q Consensus       219 ~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~  296 (373)
                      +++++++++.+++ +|++.++++.+.+  +.+.+.+.+.+++|++||++|+ ..+..++++|+++ |+++.+|..... .
T Consensus       192 ~~~~~~~~~~~~~~~g~~~~~d~~~~~--~~~~~~~~~~~~~d~vi~~~G~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~  267 (357)
T 2zb4_A          192 ICGTHEKCILLTSELGFDAAINYKKDN--VAEQLRESCPAGVDVYFDNVGG-NISDTVISQMNEN-SHIILCGQISQYNK  267 (357)
T ss_dssp             EESCHHHHHHHHHTSCCSEEEETTTSC--HHHHHHHHCTTCEEEEEESCCH-HHHHHHHHTEEEE-EEEEECCCGGGTTS
T ss_pred             EeCCHHHHHHHHHHcCCceEEecCchH--HHHHHHHhcCCCCCEEEECCCH-HHHHHHHHHhccC-cEEEEECCcccccc
Confidence            9999999999887 9999888887654  8888888877689999999997 8889999999997 999999975421 1


Q ss_pred             eeecc--------chhhcccceEEEEeccCCC--CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC-ce
Q 017336          297 VFMTK--------PINVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-GL  365 (373)
Q Consensus       297 ~~~~~--------~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~-~~  365 (373)
                      .+...        ...+.+++++.++....+.  ..+.++++++++.+|++.+.  +..+|+|+++++|++.+.+++ .+
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~g  345 (357)
T 2zb4_A          268 DVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIK--ETVINGLENMGAAFQSMMTGGNIG  345 (357)
T ss_dssp             CCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCC--EEEEECGGGHHHHHHHHHTTCCSB
T ss_pred             CccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCc--cceecCHHHHHHHHHHHHcCCCCc
Confidence            22221        1223488999987653321  12358899999999998776  456799999999999998887 46


Q ss_pred             eEEEecCC
Q 017336          366 RCIISMED  373 (373)
Q Consensus       366 k~v~~~~~  373 (373)
                      |+++++.+
T Consensus       346 Kvvi~~~~  353 (357)
T 2zb4_A          346 KQIVCISE  353 (357)
T ss_dssp             EEEEECCC
T ss_pred             eEEEEEec
Confidence            99998753

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=5.7e-46  Score=350.96  Aligned_cols=312  Identities=21%  Similarity=0.264  Sum_probs=251.3

Q ss_pred             ccchhhhccCCCC--eEE-EEeecCCC-CCCeEEEEEeeeecCcccccccccCCC---------------CCCCCccccc
Q 017336            3 STAAAVAWEAGKP--LII-QDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQ---------------TPLFPRIFGH   63 (373)
Q Consensus         3 ~~~a~~~~~~~~~--~~~-~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~---------------~~~~p~i~G~   63 (373)
                      +|||+++.+++.+  +++ ++++.|.| +++||+|||.++|||++|++.+.|..+               ...+|.++||
T Consensus        21 ~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~v~G~  100 (375)
T 2vn8_A           21 QSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGR  100 (375)
T ss_dssp             CEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSBCCCC
T ss_pred             cceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCcccce
Confidence            5899999988764  788 99999985 999999999999999999999887531               1237999999


Q ss_pred             cceEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcce
Q 017336           64 EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTF  143 (373)
Q Consensus        64 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~  143 (373)
                      |++|+|+++|++++.|++||||++.+..                                              ...|+|
T Consensus       101 E~~G~V~~vG~~V~~~~vGDrV~~~~~~----------------------------------------------~~~G~~  134 (375)
T 2vn8_A          101 DVSGVVMECGLDVKYFKPGDEVWAAVPP----------------------------------------------WKQGTL  134 (375)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEEECCT----------------------------------------------TSCCSS
T ss_pred             eeeEEEEEeCCCCCCCCCCCEEEEecCC----------------------------------------------CCCccc
Confidence            9999999999999999999999865310                                              013699


Q ss_pred             eeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhccC----CCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEE
Q 017336          144 SEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK----PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIG  218 (373)
Q Consensus       144 a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~----~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~  218 (373)
                      +||+.++++.++++|+++++++||+++++++|||+++.+.++    ++++++|||+|+ |++|++++|+|+.+|+ +|++
T Consensus       135 aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~  213 (375)
T 2vn8_A          135 SEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA-HVTA  213 (375)
T ss_dssp             BSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEE
T ss_pred             eeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEE
Confidence            999999999999999999999999999999999999877788    999999999995 9999999999999999 8888


Q ss_pred             EcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh-HhHHHHHHHhhcCCcEEEEEcCCCCCce
Q 017336          219 VDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGVPSKDAV  297 (373)
Q Consensus       219 ~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~~g~~v~~g~~~~~~~  297 (373)
                      ++ +++++++++++|++.++++.+.+  +.+.+.+.  +++|++||++|++ ..+..++++++++ |+++.+|.......
T Consensus       214 ~~-~~~~~~~~~~lGa~~v~~~~~~~--~~~~~~~~--~g~D~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~~~~~~~  287 (375)
T 2vn8_A          214 VC-SQDASELVRKLGADDVIDYKSGS--VEEQLKSL--KPFDFILDNVGGSTETWAPDFLKKWSG-ATYVTLVTPFLLNM  287 (375)
T ss_dssp             EE-CGGGHHHHHHTTCSEEEETTSSC--HHHHHHTS--CCBSEEEESSCTTHHHHGGGGBCSSSC-CEEEESCCSHHHHH
T ss_pred             Ee-ChHHHHHHHHcCCCEEEECCchH--HHHHHhhc--CCCCEEEECCCChhhhhHHHHHhhcCC-cEEEEeCCCccccc
Confidence            87 67889999999999999887655  76666543  4899999999985 4568889999997 99999986532100


Q ss_pred             ----eeccc----hhh-c-------ccceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHc
Q 017336          298 ----FMTKP----INV-L-------NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVK  361 (373)
Q Consensus       298 ----~~~~~----~~~-~-------~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~  361 (373)
                          +....    ..+ .       ++..+.....  ....+.++++++++++|++.  ++++++|||+++++|++.+.+
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~  363 (375)
T 2vn8_A          288 DRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFF--MASGPCLDDIAELVDAGKIR--PVIEQTFPFSKVPEAFLKVER  363 (375)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCC--CCCHHHHHHHHHHHHTTSCC--CCEEEEEEGGGHHHHHHHHHH
T ss_pred             ccccccchhheeehhhccccccccccCcceEEEEe--CCCHHHHHHHHHHHHCCCcc--cCcCeEECHHHHHHHHHHHHc
Confidence                00000    011 1       2223322211  11123578999999999875  568899999999999999988


Q ss_pred             CC-ceeEEEec
Q 017336          362 GE-GLRCIISM  371 (373)
Q Consensus       362 ~~-~~k~v~~~  371 (373)
                      ++ .+|+++++
T Consensus       364 ~~~~gKvvi~~  374 (375)
T 2vn8_A          364 GHARGKTVINV  374 (375)
T ss_dssp             CCCSSEEEEEC
T ss_pred             CCCCCeEEEEe
Confidence            76 46999876

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=1.7e-47  Score=355.51  Aligned_cols=317  Identities=17%  Similarity=0.186  Sum_probs=250.2

Q ss_pred             CcccchhhhccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCC
Q 017336            1 MSSTAAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVS   77 (373)
Q Consensus         1 m~~~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~   77 (373)
                      |++|||+++.+++.  .++++++|.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++  +++
T Consensus         2 ~~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~--~v~   79 (330)
T 1tt7_A            2 STLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSS--NDP   79 (330)
T ss_dssp             CCEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEEC--SST
T ss_pred             CCcceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEc--CCC
Confidence            55699999998773  4899999999999999999999999999999998886543 357999999999999996  467


Q ss_pred             CCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeC
Q 017336           78 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI  157 (373)
Q Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~  157 (373)
                      .|++||||++.+..                        .|.                   ...|+|+||+.++++.++++
T Consensus        80 ~~~vGdrV~~~~~~------------------------~g~-------------------~~~G~~aey~~v~~~~~~~i  116 (330)
T 1tt7_A           80 RFAEGDEVIATSYE------------------------LGV-------------------SRDGGLSEYASVPGDWLVPL  116 (330)
T ss_dssp             TCCTTCEEEEESTT------------------------BTT-------------------TBCCSSBSSEEECGGGEEEC
T ss_pred             CCCCCCEEEEcccc------------------------cCC-------------------CCCccceeEEEecHHHeEEC
Confidence            89999999865210                        010                   12369999999999999999


Q ss_pred             CCCCCchhhhhcccchhhhhhhhh--hccCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC
Q 017336          158 NPLAPLDKVCILSCGVSTGLGATL--NVAKPERGS-SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG  233 (373)
Q Consensus       158 p~~~~~~~aa~~~~~~~ta~~~l~--~~~~~~~~~-~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg  233 (373)
                      |+++++++||++++++.|||.++.  ..+++++++ +|||+|+ |++|++++|+|+.+|+ +|++++++++++++++++|
T Consensus       117 P~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lG  195 (330)
T 1tt7_A          117 PQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLG  195 (330)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHT
T ss_pred             CCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcC
Confidence            999999999999999999998764  346788886 9999998 9999999999999999 7999999999999999999


Q ss_pred             CceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEE
Q 017336          234 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLK  312 (373)
Q Consensus       234 ~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~  312 (373)
                      ++.++++++.+   .+.+++.+++++|++|||+|+ +.+..++++++++ |+++.+|..... ...++... +.+++++.
T Consensus       196 a~~v~~~~~~~---~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~  269 (330)
T 1tt7_A          196 ASEVISREDVY---DGTLKALSKQQWQGAVDPVGG-KQLASLLSKIQYG-GSVAVSGLTGGG-EVPATVYPFILRGVSLL  269 (330)
T ss_dssp             CSEEEEHHHHC---SSCCCSSCCCCEEEEEESCCT-HHHHHHHTTEEEE-EEEEECCCSSCS-CEEECSHHHHTSCCEEE
T ss_pred             CcEEEECCCch---HHHHHHhhcCCccEEEECCcH-HHHHHHHHhhcCC-CEEEEEecCCCC-ccCcchHHHHhcCeEEE
Confidence            99988754211   011223334489999999999 7889999999997 999999986532 23333333 34899999


Q ss_pred             EEeccCCCC---CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          313 GTFFGNYKP---RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       313 g~~~~~~~~---~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      |+.......   .+.++++++++.++++  +++++++|+|+++++|++.+.+++. +|+++++
T Consensus       270 g~~~~~~~~~~~~~~~~~~~~~~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          270 GIDSVYCPMDVRAAVWERMSSDLKPDQL--LTIVDREVSLEETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             ECCSSSCCHHHHHHHHHHTTTTSCCSCS--TTSEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred             EEeccccCHHHHHHHHHHHHHHHhcCCc--ccccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            874322110   1124445555556655  4568899999999999999988774 6998864

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=9.3e-47  Score=356.50  Aligned_cols=310  Identities=16%  Similarity=0.161  Sum_probs=252.8

Q ss_pred             ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-----------------------------
Q 017336            3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-----------------------------   53 (373)
Q Consensus         3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-----------------------------   53 (373)
                      +|||++.......+++++++.|+|+++||||||.+++||++|++.+.|.++                             
T Consensus         7 ~mka~v~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~~~   86 (379)
T 3iup_A            7 QLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSMAG   86 (379)
T ss_dssp             EEEEEECTTSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHHGG
T ss_pred             hHHHHHhcCCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCcccccccccc
Confidence            489988766555699999999999999999999999999999998887521                             


Q ss_pred             CCCCCccccccceEEEEEeCCCC-CCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCC
Q 017336           54 TPLFPRIFGHEAAGVVESVGEGV-SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGE  132 (373)
Q Consensus        54 ~~~~p~i~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~  132 (373)
                      ...+|.++|||++|+|+++|++| +.|++||||++.+                                           
T Consensus        87 ~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~-------------------------------------------  123 (379)
T 3iup_A           87 RLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIG-------------------------------------------  123 (379)
T ss_dssp             GTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECC-------------------------------------------
T ss_pred             ccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecC-------------------------------------------
Confidence            23578999999999999999999 8899999999542                                           


Q ss_pred             ccccccCCcceeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEE--CCCHHHHHHHHHHHH
Q 017336          133 PVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF--GLGAVGLAAAEGARI  210 (373)
Q Consensus       133 ~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~--G~g~~G~~ai~la~~  210 (373)
                             .|+|+||++++++.++++|+++++++||++++..+|||+++ +.+. +++++|||+  |+|++|++++|+|+.
T Consensus       124 -------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~-~~~~-~~g~~vlV~gag~G~vG~~a~q~a~~  194 (379)
T 3iup_A          124 -------GAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMV-ETMR-LEGHSALVHTAAASNLGQMLNQICLK  194 (379)
T ss_dssp             -------SCCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHH-HHHH-HTTCSCEEESSTTSHHHHHHHHHHHH
T ss_pred             -------CCcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHH-HHhc-cCCCEEEEECCCCCHHHHHHHHHHHH
Confidence                   25999999999999999999999999999999999999764 4455 899999999  459999999999999


Q ss_pred             cCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhh-----cC--
Q 017336          211 AGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVH-----DG--  282 (373)
Q Consensus       211 ~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~-----~~--  282 (373)
                      +|+ +|++++++++|+++++++|+++++++++.+  +.+.+++.+++ ++|+||||+|++...+.++++++     ++  
T Consensus       195 ~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~--~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~  271 (379)
T 3iup_A          195 DGI-KLVNIVRKQEQADLLKAQGAVHVCNAASPT--FMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSARE  271 (379)
T ss_dssp             HTC-CEEEEESSHHHHHHHHHTTCSCEEETTSTT--HHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCS
T ss_pred             CCC-EEEEEECCHHHHHHHHhCCCcEEEeCCChH--HHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccc
Confidence            999 799999999999999999999999988766  88999999887 99999999998777888888886     32  


Q ss_pred             --------CcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCC---CCCH----HHHHHHHHcCCCCCCCceeeee
Q 017336          283 --------WGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP---RTDL----PSVVDMYMNKQLELEKFITHRI  347 (373)
Q Consensus       283 --------~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~---~~~~----~~~~~~l~~~~l~~~~~~~~~~  347 (373)
                              +|+++.+|... ...+.+. ..+.+++++.|+.+..+..   .+.+    +++++++.+   .+.++++++|
T Consensus       272 ~~~~G~~~~g~iv~~G~~~-~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~i~~~~  346 (379)
T 3iup_A          272 YSRYGSTTHKQVYLYGGLD-TSPTEFN-RNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT---TFASHYSKEI  346 (379)
T ss_dssp             CCTTCCCSCEEEEECCCSE-EEEEEEC-CCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT---TTCCCCSEEE
T ss_pred             eeecccccCceEEEecCCC-CCccccc-cccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc---cCCCcceEEe
Confidence                    15555555533 1222222 2245889999987654311   1123    444455444   2556788999


Q ss_pred             ccccH--HHHHHHHHcCCc-eeEEEecC
Q 017336          348 PFSEI--NKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       348 ~l~~~--~~a~~~l~~~~~-~k~v~~~~  372 (373)
                      +|+++  ++|++.+.+++. +|+||+++
T Consensus       347 ~l~~~~~~~A~~~l~~~~~~gKvVv~~~  374 (379)
T 3iup_A          347 SLAEVLDLDMIAVYNKRATGEKYLINPN  374 (379)
T ss_dssp             EHHHHTCHHHHHHHTTCCTTCCEEEETT
T ss_pred             cHHHhhhHHHHHHHhcCCCCceEEEeCC
Confidence            99999  999999998864 69999875

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=6.2e-45  Score=334.03  Aligned_cols=293  Identities=19%  Similarity=0.252  Sum_probs=242.0

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      |||+++.+++++..+++.|.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+           |
T Consensus         1 Mka~~~~~~g~~~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~-----------G   69 (302)
T 1iz0_A            1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE-----------G   69 (302)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET-----------T
T ss_pred             CeEEEEcCCCCchheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE-----------C
Confidence            789999998886667799999999999999999999999999999886553 3679999999999997           9


Q ss_pred             CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336           83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  162 (373)
Q Consensus        83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~  162 (373)
                      |||++.+                                                 ..|+|+||++++++.++++|++++
T Consensus        70 drV~~~~-------------------------------------------------~~G~~aey~~v~~~~~~~iP~~~~  100 (302)
T 1iz0_A           70 RRYAALV-------------------------------------------------PQGGLAERVAVPKGALLPLPEGLS  100 (302)
T ss_dssp             EEEEEEC-------------------------------------------------SSCCSBSEEEEEGGGCEECCTTCC
T ss_pred             cEEEEec-------------------------------------------------CCcceeeEEEEcHHHcEeCCCCCC
Confidence            9998542                                                 126999999999999999999999


Q ss_pred             chhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336          163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  241 (373)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~  241 (373)
                      +++||+++++++|||+++.+.+ ++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++.++++.
T Consensus       101 ~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~  178 (302)
T 1iz0_A          101 PEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATYA  178 (302)
T ss_dssp             HHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEGG
T ss_pred             HHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEECC
Confidence            9999999999999999987677 999999999998 9999999999999999 899999999999999999999988765


Q ss_pred             C-CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccch-hhcccceEEEEeccCC
Q 017336          242 E-HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNY  319 (373)
Q Consensus       242 ~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~  319 (373)
                      + .+  +.+.+     +++|++|| +|+ ..+..++++++++ |+++.+|...... ..++.. .+.+++++.|+....+
T Consensus       179 ~~~~--~~~~~-----~~~d~vid-~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~  247 (302)
T 1iz0_A          179 EVPE--RAKAW-----GGLDLVLE-VRG-KEVEESLGLLAHG-GRLVYIGAAEGEV-APIPPLRLMRRNLAVLGFWLTPL  247 (302)
T ss_dssp             GHHH--HHHHT-----TSEEEEEE-CSC-TTHHHHHTTEEEE-EEEEEC--------CCCCTTHHHHTTCEEEECCHHHH
T ss_pred             cchh--HHHHh-----cCceEEEE-CCH-HHHHHHHHhhccC-CEEEEEeCCCCCC-CCcCHHHHHhCCCeEEEEeccch
Confidence            4 22  43333     57999999 998 7899999999997 9999998765321 122222 2448899999875432


Q ss_pred             C-CCCCHHHHHH---HHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336          320 K-PRTDLPSVVD---MYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  371 (373)
Q Consensus       320 ~-~~~~~~~~~~---~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~  371 (373)
                      . ..+.++++++   ++.++++.  ++++++|+|+++++|++.+.+++. +|+++++
T Consensus       248 ~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          248 LREGALVEEALGFLLPRLGRELR--PVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             TTCHHHHHHHHHHHGGGBTTTBC--CCEEEEEEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             hhhHHHHHHHHhhhHHHHcCCcc--cccceEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            1 1235788888   88899774  568899999999999999988764 6998864

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=1.8e-43  Score=328.86  Aligned_cols=306  Identities=16%  Similarity=0.206  Sum_probs=250.0

Q ss_pred             CcccchhhhccC--C----CCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCC
Q 017336            1 MSSTAAAVAWEA--G----KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGE   74 (373)
Q Consensus         1 m~~~~a~~~~~~--~----~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~   74 (373)
                      |++|||+++.+.  +    +.+++++.+.|+|+++||+|||.++|||+.|... .   ....+|.++|||++|+|++.  
T Consensus         5 ~~~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~---~~~~~p~~~g~e~~G~Vv~~--   78 (333)
T 1v3u_A            5 MVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-S---KRLKEGAVMMGQQVARVVES--   78 (333)
T ss_dssp             CCEEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-T---TTCCTTSBCCCCEEEEEEEE--
T ss_pred             cccccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-c---CcCCCCcccccceEEEEEec--
Confidence            578999999875  3    2389999999999999999999999999988732 1   22456889999999999995  


Q ss_pred             CCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCce
Q 017336           75 GVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCV  154 (373)
Q Consensus        75 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~  154 (373)
                      +++.|++||||++.                                                    |+|+||+.++++.+
T Consensus        79 ~v~~~~vGdrV~~~----------------------------------------------------g~~aey~~v~~~~~  106 (333)
T 1v3u_A           79 KNSAFPAGSIVLAQ----------------------------------------------------SGWTTHFISDGKGL  106 (333)
T ss_dssp             SCTTSCTTCEEEEC----------------------------------------------------CCSBSEEEESSTTE
T ss_pred             CCCCCCCCCEEEec----------------------------------------------------CceEEEEEechHHe
Confidence            67889999999843                                                    48999999999999


Q ss_pred             EeCCCC----CCchh-hhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHH
Q 017336          155 AKINPL----APLDK-VCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE  228 (373)
Q Consensus       155 ~~~p~~----~~~~~-aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~  228 (373)
                      +++|++    +++++ +|+++++++|||+++.+.++++++++|||+|+ |++|++++|+++..|+ +|+++++++++++.
T Consensus       107 ~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~  185 (333)
T 1v3u_A          107 EKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAY  185 (333)
T ss_dssp             EECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHH
T ss_pred             EEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHH
Confidence            999997    88887 58899999999999878889999999999998 9999999999999999 89999999999999


Q ss_pred             HHhcCCceeecCCC-CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCc----ee-eccc
Q 017336          229 AKKFGVTDFVNTSE-HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA----VF-MTKP  302 (373)
Q Consensus       229 ~~~lg~~~vi~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~----~~-~~~~  302 (373)
                      ++++|++.++|+.+ .+  +.+.+.+.+.+++|++||++|+ ..+..++++++++ |+++.+|......    .. ..+.
T Consensus       186 ~~~~g~~~~~d~~~~~~--~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~  261 (333)
T 1v3u_A          186 LKQIGFDAAFNYKTVNS--LEEALKKASPDGYDCYFDNVGG-EFLNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSP  261 (333)
T ss_dssp             HHHTTCSEEEETTSCSC--HHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEECCCCC-------CCBCCCH
T ss_pred             HHhcCCcEEEecCCHHH--HHHHHHHHhCCCCeEEEECCCh-HHHHHHHHHHhcC-CEEEEEeccccccCCCCCCCCcCH
Confidence            99999988888765 44  7788888776689999999998 6789999999997 9999999765311    11 1122


Q ss_pred             hh-hcccceEEEEeccCCC---CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC-ceeEEEec
Q 017336          303 IN-VLNERTLKGTFFGNYK---PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-GLRCIISM  371 (373)
Q Consensus       303 ~~-~~~~~~i~g~~~~~~~---~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~-~~k~v~~~  371 (373)
                      .. +.+++++.|+..+.+.   ..+.++++++++.+|++++.  +..+++|+++++|++.+.+++ .+|+++++
T Consensus       262 ~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          262 ESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYH--EHVTKGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             HHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCC--EEEEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             HHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCc--cccccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            22 3488999998654432   12356789999999988776  345679999999999998877 46998864

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=1.1e-43  Score=362.38  Aligned_cols=293  Identities=19%  Similarity=0.233  Sum_probs=247.4

Q ss_pred             eEEEEeec--CCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEeecCcCCC
Q 017336           16 LIIQDVEV--APPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGEC   93 (373)
Q Consensus        16 ~~~~~~~~--p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~   93 (373)
                      +++.+.+.  |+|+++||+|||.++|||++|+++..|.++   .|.++|||++|+|+++|++|++|++||||+...    
T Consensus       224 L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~---~~~~lG~E~aG~V~~vG~~V~~~~vGDrV~~~~----  296 (795)
T 3slk_A          224 LALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP---GVASLGSEGAGVVVETGPGVTGLAPGDRVMGMI----  296 (795)
T ss_dssp             EEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS---SCCCSCCCEEEEEEEECSSCCSSCTTCEEEECC----
T ss_pred             eEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC---CCccccceeEEEEEEeCCCCCcCCCCCEEEEEe----
Confidence            77777764  578999999999999999999999888654   356799999999999999999999999998541    


Q ss_pred             CCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchhhhhcccch
Q 017336           94 GDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV  173 (373)
Q Consensus        94 ~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~  173 (373)
                                                                    .|+|+||++++++.++++|+++++++||++++++
T Consensus       297 ----------------------------------------------~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~  330 (795)
T 3slk_A          297 ----------------------------------------------PKAFGPLAVADHRMVTRIPAGWSFARAASVPIVF  330 (795)
T ss_dssp             ----------------------------------------------SSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHH
T ss_pred             ----------------------------------------------cCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHH
Confidence                                                          2599999999999999999999999999999999


Q ss_pred             hhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHH
Q 017336          174 STGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA  252 (373)
Q Consensus       174 ~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~  252 (373)
                      +|||+++.+.+++++|++|||+|+ |++|++++|+||.+|+ +|+++.+++ |++.++ +|+++++++.+.+  +.+.++
T Consensus       331 ~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga-~V~~t~~~~-k~~~l~-lga~~v~~~~~~~--~~~~i~  405 (795)
T 3slk_A          331 LTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGA-EVYATASED-KWQAVE-LSREHLASSRTCD--FEQQFL  405 (795)
T ss_dssp             HHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTC-CEEEECCGG-GGGGSC-SCGGGEECSSSST--HHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeChH-Hhhhhh-cChhheeecCChh--HHHHHH
Confidence            999999989999999999999997 9999999999999999 799987655 656665 9999999887766  999999


Q ss_pred             HHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCC---CCCCHHHH
Q 017336          253 EMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK---PRTDLPSV  328 (373)
Q Consensus       253 ~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~---~~~~~~~~  328 (373)
                      +.+++ |+|+|||++|+ +.+..++++|+++ |+++.+|..........  ....+++++.+..+....   ..+.++++
T Consensus       406 ~~t~g~GvDvVld~~gg-~~~~~~l~~l~~~-Gr~v~iG~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~l~~~  481 (795)
T 3slk_A          406 GATGGRGVDVVLNSLAG-EFADASLRMLPRG-GRFLELGKTDVRDPVEV--ADAHPGVSYQAFDTVEAGPQRIGEMLHEL  481 (795)
T ss_dssp             HHSCSSCCSEEEECCCT-TTTHHHHTSCTTC-EEEEECCSTTCCCHHHH--HHHSSSEEEEECCGGGGHHHHHHHHHHHH
T ss_pred             HHcCCCCeEEEEECCCc-HHHHHHHHHhcCC-CEEEEeccccccCcccc--cccCCCCEEEEeeccccCHHHHHHHHHHH
Confidence            99988 99999999998 7889999999997 99999997653322211  112356666665432111   12357889


Q ss_pred             HHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336          329 VDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       329 ~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                      ++++.+|++.+  +++++|+++++++||+.+.+++. +|+||+++
T Consensus       482 ~~l~~~g~l~p--~~~~~~~l~~~~eA~~~l~~g~~~GKvVl~~~  524 (795)
T 3slk_A          482 VELFEGRVLEP--LPVTAWDVRQAPEALRHLSQARHVGKLVLTMP  524 (795)
T ss_dssp             HHHHHTTSCCC--CCEEEEEGGGHHHHHHHHHHTCCCBEEEEECC
T ss_pred             HHHHHcCCcCC--CcceeEcHHHHHHHHHHHhcCCccceEEEecC
Confidence            99999998754  58899999999999999998885 59999875

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=7.9e-42  Score=319.30  Aligned_cols=311  Identities=17%  Similarity=0.195  Sum_probs=246.7

Q ss_pred             ccchhhhcc-----CCC-CeEEE--EeecCC-CCCCeEEEEEeeeecCcccccccccCCCC----CCCCccccccceEEE
Q 017336            3 STAAAVAWE-----AGK-PLIIQ--DVEVAP-PQAMEVRIKIKYTSLCRTDLYFWESKGQT----PLFPRIFGHEAAGVV   69 (373)
Q Consensus         3 ~~~a~~~~~-----~~~-~~~~~--~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~~~~----~~~p~i~G~e~~G~V   69 (373)
                      +||+++...     ++. .++++  +++.|. |+++||||||.++|+|+.|. ...|.+..    ..+|.++|||++|++
T Consensus         4 ~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G~~   82 (345)
T 2j3h_A            4 TNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQGYG   82 (345)
T ss_dssp             EEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEEEE
T ss_pred             cceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeecce
Confidence            456655443     442 38887  888897 89999999999999998875 34454322    246899999999999


Q ss_pred             EE--eCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEE
Q 017336           70 ES--VGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYT  147 (373)
Q Consensus        70 ~~--vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~  147 (373)
                      ++  +|+++++|++||||+..                                                    |+|+||+
T Consensus        83 ~~GvV~~~v~~~~vGdrV~~~----------------------------------------------------g~~aey~  110 (345)
T 2j3h_A           83 VSRIIESGHPDYKKGDLLWGI----------------------------------------------------VAWEEYS  110 (345)
T ss_dssp             EEEEEEECSTTCCTTCEEEEE----------------------------------------------------EESBSEE
T ss_pred             EEEEEecCCCCCCCCCEEEee----------------------------------------------------cCceeEE
Confidence            99  99999999999999843                                                    4899999


Q ss_pred             EEecCc--eEeCCC---CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC
Q 017336          148 VVHSGC--VAKINP---LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR  221 (373)
Q Consensus       148 ~v~~~~--~~~~p~---~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~  221 (373)
                      .++++.  ++++|+   +++++ +|+++++++|||+++.+.++++++++|||+|+ |++|++++|+++..|+ +|+++++
T Consensus       111 ~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~  188 (345)
T 2j3h_A          111 VITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAG  188 (345)
T ss_dssp             EECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred             EecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence            999876  999996   34544 67888899999999878899999999999997 9999999999999999 8999999


Q ss_pred             ChhHHHHHH-hcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCC----c
Q 017336          222 SSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD----A  296 (373)
Q Consensus       222 ~~~~~~~~~-~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~----~  296 (373)
                      ++++++.++ ++|++.++|+.+.+ ++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|.....    .
T Consensus       189 ~~~~~~~~~~~~g~~~~~d~~~~~-~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~  265 (345)
T 2j3h_A          189 SKEKVDLLKTKFGFDDAFNYKEES-DLTAALKRCFPNGIDIYFENVGG-KMLDAVLVNMNMH-GRIAVCGMISQYNLENQ  265 (345)
T ss_dssp             SHHHHHHHHHTSCCSEEEETTSCS-CSHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEECCCGGGTTCSSC
T ss_pred             CHHHHHHHHHHcCCceEEecCCHH-HHHHHHHHHhCCCCcEEEECCCH-HHHHHHHHHHhcC-CEEEEEccccccccCCc
Confidence            999999998 79999888876531 26677777765689999999998 7889999999997 999999875421    1


Q ss_pred             eeeccchh-hcccceEEEEeccCCCC--CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336          297 VFMTKPIN-VLNERTLKGTFFGNYKP--RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       297 ~~~~~~~~-~~~~~~i~g~~~~~~~~--~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                      ...++... +.+++++.|+....+..  .+.+.++++++.+|++.+  ++.+.|+|+++++|++.+.+++. +|++++++
T Consensus       266 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~~--~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  343 (345)
T 2j3h_A          266 EGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITY--VEDVADGLEKAPEALVGLFHGKNVGKQVVVVA  343 (345)
T ss_dssp             CCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCC--CEEEEESGGGSHHHHHHHHTTCCSSEEEEESS
T ss_pred             cccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCCcC--cccccCCHHHHHHHHHHHHcCCCceEEEEEeC
Confidence            12222222 34888998876543211  123788999999998763  46678999999999999998774 59999875


Q ss_pred             C
Q 017336          373 D  373 (373)
Q Consensus       373 ~  373 (373)
                      +
T Consensus       344 ~  344 (345)
T 2j3h_A          344 R  344 (345)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=8.8e-33  Score=309.09  Aligned_cols=291  Identities=16%  Similarity=0.203  Sum_probs=233.9

Q ss_pred             eEEEEeecCC-CC--CCeEEEEEeeeecCcccccccccCCCCC-------CCCccccccceEEEEEeCCCCCCCCCCCEE
Q 017336           16 LIIQDVEVAP-PQ--AMEVRIKIKYTSLCRTDLYFWESKGQTP-------LFPRIFGHEAAGVVESVGEGVSDLEVGDHV   85 (373)
Q Consensus        16 ~~~~~~~~p~-~~--~~evlV~v~~~~i~~~D~~~~~g~~~~~-------~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V   85 (373)
                      +.+.+.+... +.  ++||+|+|.++|+|+.|+++..|.++..       ..|.++|+|++|+|.          +||+|
T Consensus      1544 l~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~----------vGdrV 1613 (2512)
T 2vz8_A         1544 IRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA----------SGRRV 1613 (2512)
T ss_dssp             EEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEET----------TSCCE
T ss_pred             eEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEc----------cCCEE
Confidence            5565555433 33  7899999999999999999988865422       245689999999882          79999


Q ss_pred             eecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchh
Q 017336           86 LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK  165 (373)
Q Consensus        86 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~  165 (373)
                      +...                                                 ..|+|+||++++++.++++|+++++++
T Consensus      1614 ~g~~-------------------------------------------------~~G~~Aeyv~vp~~~v~~iPd~ls~~e 1644 (2512)
T 2vz8_A         1614 MGMV-------------------------------------------------PAEGLATSVLLLQHATWEVPSTWTLEE 1644 (2512)
T ss_dssp             EEEC-------------------------------------------------SSCCSBSEEECCGGGEEECCTTSCHHH
T ss_pred             EEee-------------------------------------------------cCCceeeEEEcccceEEEeCCCCCHHH
Confidence            8441                                                 125999999999999999999999999


Q ss_pred             hhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecC
Q 017336          166 VCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNT  240 (373)
Q Consensus       166 aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~  240 (373)
                      ||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|++.+++    +|+++++++
T Consensus      1645 AA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~~s~~k~~~l~~~~~~lga~~v~~~ 1723 (2512)
T 2vz8_A         1645 AASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTVGSAEKRAYLQARFPQLDETCFANS 1723 (2512)
T ss_dssp             HTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTCCSTTEEES
T ss_pred             HHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEeCChhhhHHHHhhcCCCCceEEecC
Confidence            99999999999999888899999999999986 9999999999999999 89999999999999986    788889888


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCC
Q 017336          241 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY  319 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  319 (373)
                      .+.+  +.+.+++.+++ |+|+|||++++ +.+..++++++++ |+++.+|..............+.+++++.++.+...
T Consensus      1724 ~~~~--~~~~i~~~t~g~GvDvVld~~g~-~~l~~~l~~L~~~-Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 1799 (2512)
T 2vz8_A         1724 RDTS--FEQHVLRHTAGKGVDLVLNSLAE-EKLQASVRCLAQH-GRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSL 1799 (2512)
T ss_dssp             SSSH--HHHHHHHTTTSCCEEEEEECCCH-HHHHHHHTTEEEE-EEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGT
T ss_pred             CCHH--HHHHHHHhcCCCCceEEEECCCc-hHHHHHHHhcCCC-cEEEEeecccccccCcccccccccCCcEEEeeHHHH
Confidence            7654  88889888887 89999999985 8899999999997 999999864311111222333558899988765432


Q ss_pred             CC--CCCHHHHHHHHH----cCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336          320 KP--RTDLPSVVDMYM----NKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  372 (373)
Q Consensus       320 ~~--~~~~~~~~~~l~----~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~  372 (373)
                      ..  .+.+.++++++.    ++++  .++++++||++++++|++.+.+++. +|+|++++
T Consensus      1800 ~~~~~~~~~~~l~~l~~~~~~g~l--~p~i~~~f~l~ei~eA~~~l~~g~~~GKvVi~~~ 1857 (2512)
T 2vz8_A         1800 FEEGGATWQEVSELLKAGIQEGVV--QPLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQVR 1857 (2512)
T ss_dssp             TSSCCHHHHHHHHHHHHHHTTTCS--CCCCEEEEESSTHHHHHHHHHTTCCSSEEEEECS
T ss_pred             hhhCHHHHHHHHHHHHHHHHcCCc--CCCcceEecHHHHHHHHHhhhccCccceEEEECC
Confidence            11  123555555554    4544  4568899999999999999998875 59999874

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.88  E-value=1.4e-22  Score=173.72  Aligned_cols=182  Identities=20%  Similarity=0.262  Sum_probs=137.5

Q ss_pred             CceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH
Q 017336          152 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  230 (373)
Q Consensus       152 ~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~  230 (373)
                      +.++++|+++++++||++++++.|||+++.+.++++++++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLS   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            4688999999999999999999999999877789999999999996 9999999999999999 8999999999999999


Q ss_pred             hcCCceeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCC--Cceeeccchhhcc
Q 017336          231 KFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK--DAVFMTKPINVLN  307 (373)
Q Consensus       231 ~lg~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~--~~~~~~~~~~~~~  307 (373)
                      ++|++.+++..+.+  +.+.+.+.+.+ ++|++||++|. ..+..++++|+++ |+++.+|....  ...+..  ..+.+
T Consensus        81 ~~g~~~~~d~~~~~--~~~~~~~~~~~~~~D~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~--~~~~~  154 (198)
T 1pqw_A           81 RLGVEYVGDSRSVD--FADEILELTDGYGVDVVLNSLAG-EAIQRGVQILAPG-GRFIELGKKDVYADASLGL--AALAK  154 (198)
T ss_dssp             TTCCSEEEETTCST--HHHHHHHHTTTCCEEEEEECCCT-HHHHHHHHTEEEE-EEEEECSCGGGTTTCEEEG--GGGTT
T ss_pred             HcCCCEEeeCCcHH--HHHHHHHHhCCCCCeEEEECCch-HHHHHHHHHhccC-CEEEEEcCCCCcCcCcCCh--hHhcC
Confidence            99998888776654  77778777765 89999999986 7889999999997 99999997642  222322  22347


Q ss_pred             cceEEEEec------cCCCCCCCHHHHHHHHHcCCCCCC
Q 017336          308 ERTLKGTFF------GNYKPRTDLPSVVDMYMNKQLELE  340 (373)
Q Consensus       308 ~~~i~g~~~------~~~~~~~~~~~~~~~l~~~~l~~~  340 (373)
                      ++++.+..+      ......+.++++++++++|++++.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  193 (198)
T 1pqw_A          155 SASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVL  193 (198)
T ss_dssp             TCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             CcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCC
Confidence            788876432      111112457889999999988765

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=99.16  E-value=4.7e-11  Score=105.21  Aligned_cols=168  Identities=11%  Similarity=0.070  Sum_probs=109.7

Q ss_pred             CCCCCEEeecC-------cCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEec
Q 017336           79 LEVGDHVLPVF-------TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS  151 (373)
Q Consensus        79 ~~~Gd~V~~~~-------~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~  151 (373)
                      +++||+|++.+       ...|+.|..|+.|.++.|+.....                          .|+..      +
T Consensus         4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~~--------------------------~G~~~------~   51 (248)
T 2yvl_A            4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGKP--------------------------EGVKI------N   51 (248)
T ss_dssp             CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTCC--------------------------TTEEE------T
T ss_pred             CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCCC--------------------------CCCEE------E
Confidence            89999999987       678888999999999888743211                          02222      2


Q ss_pred             CceEeCCCCCCchhhhh-----cccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHH
Q 017336          152 GCVAKINPLAPLDKVCI-----LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF  226 (373)
Q Consensus       152 ~~~~~~p~~~~~~~aa~-----~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~  226 (373)
                      ..+.+-|+...+.+.+.     +..+. .+. .+.....+.++++||.+|+| .|..++.+++. +. +|++++.+++..
T Consensus        52 ~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~-~v~~vD~~~~~~  126 (248)
T 2yvl_A           52 GFEVYRPTLEEIILLGFERKTQIIYPK-DSF-YIALKLNLNKEKRVLEFGTG-SGALLAVLSEV-AG-EVWTFEAVEEFY  126 (248)
T ss_dssp             TEEEECCCHHHHHHHTSCCSSCCCCHH-HHH-HHHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEECSCHHHH
T ss_pred             EEEEeCCCHHHHHHhcCcCCCCcccch-hHH-HHHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh-CC-EEEEEecCHHHH
Confidence            33333343222221111     11111 122 23456778899999999998 59999999988 66 999999999988


Q ss_pred             HHHHhc----CC-ceeecCCCCCccHHHHHHHHc-C-CCccEEEEccCCh-HhHHHHHHHhhcCCcEEEEEcC
Q 017336          227 EEAKKF----GV-TDFVNTSEHDRPIQEVIAEMT-N-GGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       227 ~~~~~l----g~-~~vi~~~~~~~~~~~~~~~~~-~-~~~d~vid~~g~~-~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      +.+++.    +. +.+-.... +  +    .+.. . +++|+|+...+.+ ..+..+.+.|+++ |++++...
T Consensus       127 ~~a~~~~~~~~~~~~~~~~~~-d--~----~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  191 (248)
T 2yvl_A          127 KTAQKNLKKFNLGKNVKFFNV-D--F----KDAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEG-APVGFLLP  191 (248)
T ss_dssp             HHHHHHHHHTTCCTTEEEECS-C--T----TTSCCCTTCBSEEEECSSCGGGGHHHHHHHBCTT-CEEEEEES
T ss_pred             HHHHHHHHHcCCCCcEEEEEc-C--h----hhcccCCCcccEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            887653    43 11111111 1  1    0111 2 3799999988776 7899999999997 99988754

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.91  E-value=2.2e-11  Score=115.19  Aligned_cols=183  Identities=17%  Similarity=0.148  Sum_probs=128.1

Q ss_pred             ccccccceEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCcccccc
Q 017336           59 RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFL  138 (373)
Q Consensus        59 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~  138 (373)
                      ...|++.++.|.++|++++++.+|+.++..+...                        ++..                ..
T Consensus        75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~------------------------~~~~----------------~~  114 (404)
T 1gpj_A           75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQVKK------------------------AYDR----------------AA  114 (404)
T ss_dssp             EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHH------------------------HHHH----------------HH
T ss_pred             eecCchHhhhheeeccCCCCCcCCcchhHHHHHH------------------------HHHH----------------HH
Confidence            3578999999999999999999999874311000                        0000                00


Q ss_pred             CCcceeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhcc---CCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Q 017336          139 GTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA---KPERGSSVAVFGLGAVGLAAAEGARIAGASR  215 (373)
Q Consensus       139 ~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~---~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~  215 (373)
                      ..|++++|+..+...++.+|+.++.+.++. ..++.++|.++....   .-.++++|+|+|+|.+|.++++.++..|+.+
T Consensus       115 ~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~  193 (404)
T 1gpj_A          115 RLGTLDEALKIVFRRAINLGKRAREETRIS-EGAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRA  193 (404)
T ss_dssp             HHTCCCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSE
T ss_pred             HcCCchHHHHHHHHHHhhhhccCcchhhhc-CCCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCE
Confidence            114678888888888899999887776654 346777777643211   1257999999999999999999999999878


Q ss_pred             EEEEcCChhHH-HHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHH--HHHHH--h--hcCCcEEEE
Q 017336          216 IIGVDRSSKRF-EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMI--SAFEC--V--HDGWGVAVL  288 (373)
Q Consensus       216 V~~~~~~~~~~-~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~--~~~~~--l--~~~~g~~v~  288 (373)
                      |++++++.++. ++++++|++ ++++.    ++.+.+     .++|+|++|++.+..+.  ..++.  +  +++ +.+++
T Consensus       194 V~v~~r~~~ra~~la~~~g~~-~~~~~----~l~~~l-----~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~-~~~v~  262 (404)
T 1gpj_A          194 VLVANRTYERAVELARDLGGE-AVRFD----ELVDHL-----ARSDVVVSATAAPHPVIHVDDVREALRKRDRR-SPILI  262 (404)
T ss_dssp             EEEECSSHHHHHHHHHHHTCE-ECCGG----GHHHHH-----HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSC-CCEEE
T ss_pred             EEEEeCCHHHHHHHHHHcCCc-eecHH----hHHHHh-----cCCCEEEEccCCCCceecHHHHHHHHHhccCC-CCEEE
Confidence            99999998886 677888886 33322    133222     26899999998754432  45555  4  454 67777


Q ss_pred             EcCCC
Q 017336          289 VGVPS  293 (373)
Q Consensus       289 ~g~~~  293 (373)
                      ++...
T Consensus       263 vdia~  267 (404)
T 1gpj_A          263 IDIAN  267 (404)
T ss_dssp             EECCS
T ss_pred             EEccC
Confidence            77643

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.69  E-value=2.8e-08  Score=93.25  Aligned_cols=166  Identities=14%  Similarity=0.145  Sum_probs=104.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCC---------------C--ccHHH
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEH---------------D--RPIQE  249 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~---------------~--~~~~~  249 (373)
                      ++++|+|+|+|.+|++++++++.+|+ +|+++++++++++.++++|++.+ ++..+.               +  ....+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            68999999999999999999999999 79999999999999989998755 232110               0  00112


Q ss_pred             HHHHHcCCCccEEEEcc---CChH--h-HHHHHHHhhcCCcEEEEEcCCCCCc-eeeccchhh-cccceEEEEeccCCCC
Q 017336          250 VIAEMTNGGVDRSVECT---GNID--N-MISAFECVHDGWGVAVLVGVPSKDA-VFMTKPINV-LNERTLKGTFFGNYKP  321 (373)
Q Consensus       250 ~~~~~~~~~~d~vid~~---g~~~--~-~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~~-~~~~~i~g~~~~~~~~  321 (373)
                      .+.+... ++|+||+++   |.+.  . ....++.|+++ +.++.++...+.. ........+ .+++++.++...  . 
T Consensus       250 ~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g-~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~--p-  324 (384)
T 1l7d_A          250 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNV--P-  324 (384)
T ss_dssp             HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSG--G-
T ss_pred             HHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-CEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCC--c-
Confidence            2444443 699999999   5322  2 36788999997 9999998643221 111111123 377888876432  1 


Q ss_pred             CCCHHHHHHHHHcCCCCCCCce-ee---eeccccHHHHHHHH
Q 017336          322 RTDLPSVVDMYMNKQLELEKFI-TH---RIPFSEINKAFEYM  359 (373)
Q Consensus       322 ~~~~~~~~~~l~~~~l~~~~~~-~~---~~~l~~~~~a~~~l  359 (373)
                      .+...+..+++.++.+++...+ .+   .+.++.-.+.++..
T Consensus       325 ~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  366 (384)
T 1l7d_A          325 SRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGT  366 (384)
T ss_dssp             GGGHHHHHHHHHHHHHHHHGGGEETTTTEECCCTTCHHHHHH
T ss_pred             chhHHHHHHHHHHhHHHHHHHHHhCCcchhhccccCHHHhcC
Confidence            1224557777777755432222 22   34444445555543

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.67  E-value=4.9e-08  Score=90.75  Aligned_cols=118  Identities=19%  Similarity=0.116  Sum_probs=84.0

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce--eecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~--vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      +++|+|+|+|++|++++++++.+|+ +|+++++++++++.+++++...  +++.+..  ++.+.+    . ++|+||+|+
T Consensus       167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~----~-~~DvVI~~~  238 (361)
T 1pjc_A          167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNSA--EIETAV----A-EADLLIGAV  238 (361)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCHH--HHHHHH----H-TCSEEEECC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCCHH--HHHHHH----c-CCCEEEECC
Confidence            4899999999999999999999999 8999999999999998876644  2322211  122222    2 699999999


Q ss_pred             CChHh------HHHHHHHhhcCCcEEEEEcCCCCCc-----eeeccchhh-cccceEEEEe
Q 017336          267 GNIDN------MISAFECVHDGWGVAVLVGVPSKDA-----VFMTKPINV-LNERTLKGTF  315 (373)
Q Consensus       267 g~~~~------~~~~~~~l~~~~g~~v~~g~~~~~~-----~~~~~~~~~-~~~~~i~g~~  315 (373)
                      +.+..      ....++.|+++ ++++.++...++.     ...++...+ .+++++.+..
T Consensus       239 ~~~~~~~~~li~~~~~~~~~~g-~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~  298 (361)
T 1pjc_A          239 LVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVP  298 (361)
T ss_dssp             CCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCS
T ss_pred             CcCCCCCCeecCHHHHhhCCCC-CEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeC
Confidence            87542      56788999997 9999998764321     112222222 3677776643

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.46  E-value=7.7e-07  Score=83.69  Aligned_cols=124  Identities=20%  Similarity=0.163  Sum_probs=85.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee-cCCC----C-------CccH----HHHH
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV-NTSE----H-------DRPI----QEVI  251 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi-~~~~----~-------~~~~----~~~~  251 (373)
                      ++++|+|+|+|.+|++++++|+.+|+ +|++++++.++++.++++|++.+. +..+    .       +.++    .+.+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            58899999999999999999999999 899999999999999999987542 2110    0       0001    1123


Q ss_pred             HHHcCCCccEEEEccCCh-----Hh-HHHHHHHhhcCCcEEEEEcCCCCCceeecc--ch--hhcccceEEEEe
Q 017336          252 AEMTNGGVDRSVECTGNI-----DN-MISAFECVHDGWGVAVLVGVPSKDAVFMTK--PI--NVLNERTLKGTF  315 (373)
Q Consensus       252 ~~~~~~~~d~vid~~g~~-----~~-~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~--~~--~~~~~~~i~g~~  315 (373)
                      .+... ++|+||++++.+     .. ....++.|+++ +.++.++...++ .++..  ..  ...+++++.|..
T Consensus       250 ~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g-~vIVdva~~~Gg-~v~~~~~~~p~~~~~gv~i~g~~  320 (401)
T 1x13_A          250 AAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAG-SVIVDLAAQNGG-NCEYTVPGEIFTTENGVKVIGYT  320 (401)
T ss_dssp             HHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGTC-SBTTCCTTSEEECTTSCEEECCS
T ss_pred             HHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-cEEEEEcCCCCC-CcCcccCCCceEEECCEEEEeeC
Confidence            33333 689999995332     22 36789999997 999999864322 12221  11  234788888764

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.45  E-value=4.3e-07  Score=84.82  Aligned_cols=98  Identities=18%  Similarity=0.152  Sum_probs=75.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      ++++|+|+|+|.+|+++++.++.+|+ +|+++++++++++.+++ +|.....+...    . ..+.+... ++|+|++|+
T Consensus       167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~~----~-~~l~~~l~-~aDvVi~~~  239 (377)
T 2vhw_A          167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYSS----A-YELEGAVK-RADLVIGAV  239 (377)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEECC----H-HHHHHHHH-HCSEEEECC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccCC----H-HHHHHHHc-CCCEEEECC
Confidence            57999999999999999999999999 89999999999888877 77753222211    1 11222222 589999999


Q ss_pred             CChHh------HHHHHHHhhcCCcEEEEEcCCC
Q 017336          267 GNIDN------MISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       267 g~~~~------~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +.+..      ....++.|+++ +.++.++...
T Consensus       240 ~~p~~~t~~li~~~~l~~mk~g-~~iV~va~~~  271 (377)
T 2vhw_A          240 LVPGAKAPKLVSNSLVAHMKPG-AVLVDIAIDQ  271 (377)
T ss_dssp             CCTTSCCCCCBCHHHHTTSCTT-CEEEEGGGGT
T ss_pred             CcCCCCCcceecHHHHhcCCCC-cEEEEEecCC
Confidence            86543      57888999997 9999998543

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.40  E-value=8.9e-07  Score=84.85  Aligned_cols=106  Identities=23%  Similarity=0.261  Sum_probs=83.5

Q ss_pred             hhhhhhhhhhcc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHH
Q 017336          173 VSTGLGATLNVA-KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI  251 (373)
Q Consensus       173 ~~ta~~~l~~~~-~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~  251 (373)
                      ..++|.++.+.. ...+|++|+|+|.|.+|..+++.++.+|+ +|+++++++++.+.++++|++ +++       +.+. 
T Consensus       257 ~~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~-~~~-------l~e~-  326 (494)
T 3ce6_A          257 RHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMMEGFD-VVT-------VEEA-  326 (494)
T ss_dssp             HHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECC-------HHHH-
T ss_pred             hhhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCE-Eec-------HHHH-
Confidence            344555532222 26789999999999999999999999999 899999999998889999986 321       3221 


Q ss_pred             HHHcCCCccEEEEccCChHhHH-HHHHHhhcCCcEEEEEcCCC
Q 017336          252 AEMTNGGVDRSVECTGNIDNMI-SAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       252 ~~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~~g~~v~~g~~~  293 (373)
                         . .++|+|+++++....+. ..++.|+++ ++++.+|...
T Consensus       327 ---l-~~aDvVi~atgt~~~i~~~~l~~mk~g-gilvnvG~~~  364 (494)
T 3ce6_A          327 ---I-GDADIVVTATGNKDIIMLEHIKAMKDH-AILGNIGHFD  364 (494)
T ss_dssp             ---G-GGCSEEEECSSSSCSBCHHHHHHSCTT-CEEEECSSSG
T ss_pred             ---H-hCCCEEEECCCCHHHHHHHHHHhcCCC-cEEEEeCCCC
Confidence               2 26899999999877666 889999997 9999998754

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.36  E-value=1.3e-06  Score=81.37  Aligned_cols=98  Identities=24%  Similarity=0.227  Sum_probs=71.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      ++++|+|+|+|.+|+++++.++.+|+ +|+++++++++.+.+++ +|.....+..+.     +.+.+... ++|+||+++
T Consensus       165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~-----~~l~~~~~-~~DvVi~~~  237 (369)
T 2eez_A          165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTATE-----ANIKKSVQ-HADLLIGAV  237 (369)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEECCH-----HHHHHHHH-HCSEEEECC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecCCH-----HHHHHHHh-CCCEEEECC
Confidence            45899999999999999999999999 89999999999888766 776532322221     12222222 589999999


Q ss_pred             CChH------hHHHHHHHhhcCCcEEEEEcCCC
Q 017336          267 GNID------NMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       267 g~~~------~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +.+.      ....+++.|+++ |+++.++...
T Consensus       238 g~~~~~~~~li~~~~l~~mk~g-g~iV~v~~~~  269 (369)
T 2eez_A          238 LVPGAKAPKLVTRDMLSLMKEG-AVIVDVAVDQ  269 (369)
T ss_dssp             C-------CCSCHHHHTTSCTT-CEEEECC---
T ss_pred             CCCccccchhHHHHHHHhhcCC-CEEEEEecCC
Confidence            8753      256788999997 9999998764

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=98.14  E-value=3.9e-06  Score=74.89  Aligned_cols=104  Identities=18%  Similarity=0.251  Sum_probs=73.4

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh----cCC-ceeecCCCCCccHHHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGV-TDFVNTSEHDRPIQEVIAE  253 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~----lg~-~~vi~~~~~~~~~~~~~~~  253 (373)
                      +.....+.++++||-+|+|. |..++.+++..+ ..+|++++.+++..+.+++    .+. +.+- ....+  +.+.   
T Consensus       104 i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~-~~~~d--~~~~---  176 (277)
T 1o54_A          104 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVT-IKVRD--ISEG---  176 (277)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEE-EECCC--GGGC---
T ss_pred             HHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEE-EEECC--HHHc---
Confidence            34556788999999999987 888889998864 3389999999988887765    354 2221 11111  1111   


Q ss_pred             HcCCCccEEEEccCCh-HhHHHHHHHhhcCCcEEEEEcC
Q 017336          254 MTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       254 ~~~~~~d~vid~~g~~-~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      +..+.+|+|+.....+ ..+..+.+.|+++ |++++...
T Consensus       177 ~~~~~~D~V~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  214 (277)
T 1o54_A          177 FDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVCP  214 (277)
T ss_dssp             CSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEES
T ss_pred             ccCCccCEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            1223799999877665 6788999999997 99888754

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.10  E-value=1.1e-05  Score=74.34  Aligned_cols=124  Identities=17%  Similarity=0.196  Sum_probs=84.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee-cCCC--C-C------c----cHHHHHHH
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV-NTSE--H-D------R----PIQEVIAE  253 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi-~~~~--~-~------~----~~~~~~~~  253 (373)
                      ++++|+|+|+|.+|+.++++++.+|+ +|++++++.++++.++++|++.+. +.+.  . .      .    .-.+.+.+
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            67899999999999999999999999 899999999999999999986432 1000  0 0      0    01122333


Q ss_pred             HcCCCccEEEEccCChH------hHHHHHHHhhcCCcEEEEEcCCCCCceeeccch--hhc-ccceEEEEe
Q 017336          254 MTNGGVDRSVECTGNID------NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI--NVL-NERTLKGTF  315 (373)
Q Consensus       254 ~~~~~~d~vid~~g~~~------~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~--~~~-~~~~i~g~~  315 (373)
                      ... ++|+||.++..+.      ..+..++.|+++ +.++.++...++ .+.....  .+. +++++.+..
T Consensus       262 ~l~-~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpG-sVIVDvA~d~GG-~~e~t~~~~~~~~~gV~~~~v~  329 (381)
T 3p2y_A          262 AIT-KFDIVITTALVPGRPAPRLVTAAAATGMQPG-SVVVDLAGETGG-NCELTEPGRTIVHHGVTITSPL  329 (381)
T ss_dssp             HHT-TCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGTC-SBTTCCTTCEEEETTEEEECCS
T ss_pred             HHh-cCCEEEECCCCCCcccceeecHHHHhcCCCC-cEEEEEeCCCCC-ccccccCCCeEEECCEEEEeeC
Confidence            333 7999999864321      347899999997 999999875533 2332211  122 566666543

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.09  E-value=1.1e-05  Score=75.15  Aligned_cols=124  Identities=17%  Similarity=0.158  Sum_probs=84.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC-C---C------C----CccH----HH
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT-S---E------H----DRPI----QE  249 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~-~---~------~----~~~~----~~  249 (373)
                      ++.+|+|+|+|.+|+.++++++.+|+ +|++++++.++++.++++|++.+... .   +      .    ...+    .+
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            67899999999999999999999999 89999999999999999998643211 0   0      0    0001    12


Q ss_pred             HHHHHcCCCccEEEEccCChH------hHHHHHHHhhcCCcEEEEEcCCCCCceeecc--chhh-cccceEEEEe
Q 017336          250 VIAEMTNGGVDRSVECTGNID------NMISAFECVHDGWGVAVLVGVPSKDAVFMTK--PINV-LNERTLKGTF  315 (373)
Q Consensus       250 ~~~~~~~~~~d~vid~~g~~~------~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~--~~~~-~~~~~i~g~~  315 (373)
                      .+.+... ++|+||.++..+.      ..+..++.|+++ +.++.++...++ .+...  ...+ .+++++.+..
T Consensus       268 ~l~e~l~-~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~G-sVIVDvA~d~GG-~~e~t~~~~~~~~~GV~~~gv~  339 (405)
T 4dio_A          268 LVAEHIA-KQDIVITTALIPGRPAPRLVTREMLDSMKPG-SVVVDLAVERGG-NIEGAEAGKVTEVGGVRIVGHL  339 (405)
T ss_dssp             HHHHHHH-TCSEEEECCCCSSSCCCCCBCHHHHTTSCTT-CEEEETTGGGTC-SBTTCCTTEEEEETTEEEEECS
T ss_pred             HHHHHhc-CCCEEEECCcCCCCCCCEEecHHHHhcCCCC-CEEEEEeCCCCC-CccccCCCCeEEECCEEEEEeC
Confidence            2333333 6999999964321      456899999997 999998864322 22221  1112 3677777754

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.04  E-value=1.7e-05  Score=64.08  Aligned_cols=93  Identities=18%  Similarity=0.217  Sum_probs=65.2

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCceeecCCCCCccHHHHHHHHcCCCccEE
Q 017336          184 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  262 (373)
Q Consensus       184 ~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~v  262 (373)
                      ....++++|+|+|+|.+|..+++.++..|. +|+++++++++.+.++ +.|...+. .+..+   .+.+.+....++|+|
T Consensus        14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~~~-~d~~~---~~~l~~~~~~~ad~V   88 (155)
T 2g1u_A           14 SKKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFTVV-GDAAE---FETLKECGMEKADMV   88 (155)
T ss_dssp             ---CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEEEE-SCTTS---HHHHHTTTGGGCSEE
T ss_pred             hcccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcEEE-ecCCC---HHHHHHcCcccCCEE
Confidence            345577899999999999999999999998 8999999998888777 67765432 22222   122333212279999


Q ss_pred             EEccCChHhHHHHHHHhhc
Q 017336          263 VECTGNIDNMISAFECVHD  281 (373)
Q Consensus       263 id~~g~~~~~~~~~~~l~~  281 (373)
                      |.+++.......+...++.
T Consensus        89 i~~~~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           89 FAFTNDDSTNFFISMNARY  107 (155)
T ss_dssp             EECSSCHHHHHHHHHHHHH
T ss_pred             EEEeCCcHHHHHHHHHHHH
Confidence            9999986655555555554

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.04  E-value=4e-05  Score=58.40  Aligned_cols=93  Identities=16%  Similarity=0.182  Sum_probs=65.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      .+++|+|+|+|.+|..+++.+...|..+|+++++++++.+.+...+...+ .+..+     .+.+.+... ++|+||+++
T Consensus         4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~~~-~~d~vi~~~   77 (118)
T 3ic5_A            4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKD-----EAGLAKALG-GFDAVISAA   77 (118)
T ss_dssp             TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTC-----HHHHHHHTT-TCSEEEECS
T ss_pred             CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCC-----HHHHHHHHc-CCCEEEECC
Confidence            35689999999999999999999993389999999999888887776543 22222     133444433 799999999


Q ss_pred             CChHhHHHHHHHhhcCCcEEE
Q 017336          267 GNIDNMISAFECVHDGWGVAV  287 (373)
Q Consensus       267 g~~~~~~~~~~~l~~~~g~~v  287 (373)
                      +..........++..+ -.++
T Consensus        78 ~~~~~~~~~~~~~~~g-~~~~   97 (118)
T 3ic5_A           78 PFFLTPIIAKAAKAAG-AHYF   97 (118)
T ss_dssp             CGGGHHHHHHHHHHTT-CEEE
T ss_pred             CchhhHHHHHHHHHhC-CCEE
Confidence            8744444445555554 4443

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=98.03  E-value=1.2e-05  Score=71.82  Aligned_cols=101  Identities=16%  Similarity=0.122  Sum_probs=74.9

Q ss_pred             hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCceeecCCCCCccHHHHHHHHcCC
Q 017336          182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNG  257 (373)
Q Consensus       182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l----g~~~vi~~~~~~~~~~~~~~~~~~~  257 (373)
                      ..++++++++||.+|+|..++.++.+++..|+ +|++++.+++..+.+++.    |.+.+ .....+  .    .++..+
T Consensus       116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v-~~v~gD--a----~~l~d~  187 (298)
T 3fpf_A          116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGV-NVITGD--E----TVIDGL  187 (298)
T ss_dssp             HHTTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSE-EEEESC--G----GGGGGC
T ss_pred             HHcCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCe-EEEECc--h----hhCCCC
Confidence            34788999999999999877888888888898 899999999998888763    54322 111111  1    112234


Q ss_pred             CccEEEEccCCh---HhHHHHHHHhhcCCcEEEEEcC
Q 017336          258 GVDRSVECTGNI---DNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       258 ~~d~vid~~g~~---~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      .||+|+.....+   ..+..+.+.|+|+ |+++....
T Consensus       188 ~FDvV~~~a~~~d~~~~l~el~r~LkPG-G~Lvv~~~  223 (298)
T 3fpf_A          188 EFDVLMVAALAEPKRRVFRNIHRYVDTE-TRIIYRTY  223 (298)
T ss_dssp             CCSEEEECTTCSCHHHHHHHHHHHCCTT-CEEEEEEC
T ss_pred             CcCEEEECCCccCHHHHHHHHHHHcCCC-cEEEEEcC
Confidence            899999765543   5788999999997 99987754

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=97.99  E-value=8.5e-06  Score=72.19  Aligned_cols=95  Identities=18%  Similarity=0.175  Sum_probs=70.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHhcCCce-eecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~~~~lg~~~-vi~~~~~~~~~~~~~~~~~~~~~d~vid  264 (373)
                      .++.+||.+|+|. |..+..+++.. +. +|++++.+++..+.+++.+... ++..+..+  +     ....+.||+|+.
T Consensus        84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~--~-----~~~~~~fD~v~~  154 (269)
T 1p91_A           84 DKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASSHR--L-----PFSDTSMDAIIR  154 (269)
T ss_dssp             TTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCTTS--C-----SBCTTCEEEEEE
T ss_pred             CCCCEEEEECCCC-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHhCCCcEEEEcchhh--C-----CCCCCceeEEEE
Confidence            5788999999988 99999999986 66 8999999999999998865432 22221111  0     012237999996


Q ss_pred             ccCChHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          265 CTGNIDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       265 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      .. .+..+..+.+.|+++ |++++....
T Consensus       155 ~~-~~~~l~~~~~~L~pg-G~l~~~~~~  180 (269)
T 1p91_A          155 IY-APCKAEELARVVKPG-GWVITATPG  180 (269)
T ss_dssp             ES-CCCCHHHHHHHEEEE-EEEEEEEEC
T ss_pred             eC-ChhhHHHHHHhcCCC-cEEEEEEcC
Confidence            54 447899999999997 999887543

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.91  E-value=6.9e-05  Score=69.93  Aligned_cols=93  Identities=20%  Similarity=0.277  Sum_probs=74.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      .-.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|... .+       +    .+... ..|+|+.|
T Consensus       217 ~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~v-~~-------L----eeal~-~ADIVi~a  282 (435)
T 3gvp_A          217 MFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQACMDGFRL-VK-------L----NEVIR-QVDIVITC  282 (435)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-CC-------H----HHHTT-TCSEEEEC
T ss_pred             eecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHHHcCCEe-cc-------H----HHHHh-cCCEEEEC
Confidence            4589999999999999999999999999 8999999888777776777532 11       2    22222 68999999


Q ss_pred             cCChHhHH-HHHHHhhcCCcEEEEEcCCC
Q 017336          266 TGNIDNMI-SAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       266 ~g~~~~~~-~~~~~l~~~~g~~v~~g~~~  293 (373)
                      .|....+. ..++.|+++ +.++.+|...
T Consensus       283 tgt~~lI~~e~l~~MK~g-ailINvgrg~  310 (435)
T 3gvp_A          283 TGNKNVVTREHLDRMKNS-CIVCNMGHSN  310 (435)
T ss_dssp             SSCSCSBCHHHHHHSCTT-EEEEECSSTT
T ss_pred             CCCcccCCHHHHHhcCCC-cEEEEecCCC
Confidence            88766665 889999997 9998888764

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.83  E-value=7.7e-05  Score=67.03  Aligned_cols=95  Identities=21%  Similarity=0.273  Sum_probs=72.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      -.+++|+|+|.|.+|..+++.++.+|+ +|++++++.++.+.++++|+..+ +..        .+.+.. ...|+|+.++
T Consensus       153 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-~~~--------~l~~~l-~~aDvVi~~~  221 (293)
T 3d4o_A          153 IHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGMEPF-HIS--------KAAQEL-RDVDVCINTI  221 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTSEEE-EGG--------GHHHHT-TTCSEEEECC
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCeec-Chh--------hHHHHh-cCCCEEEECC
Confidence            468999999999999999999999999 89999999888777778887532 211        122222 2689999999


Q ss_pred             CChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          267 GNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       267 g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +....-...++.++++ +.++.++...
T Consensus       222 p~~~i~~~~l~~mk~~-~~lin~ar~~  247 (293)
T 3d4o_A          222 PALVVTANVLAEMPSH-TFVIDLASKP  247 (293)
T ss_dssp             SSCCBCHHHHHHSCTT-CEEEECSSTT
T ss_pred             ChHHhCHHHHHhcCCC-CEEEEecCCC
Confidence            7633335678889997 9999887643

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.82  E-value=7.5e-06  Score=65.39  Aligned_cols=106  Identities=15%  Similarity=0.198  Sum_probs=71.6

Q ss_pred             hhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHH-HHhcCCceeecCCCCCccHHHHH
Q 017336          173 VSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVI  251 (373)
Q Consensus       173 ~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~-~~~lg~~~vi~~~~~~~~~~~~~  251 (373)
                      ++.++.++ +......+++|+|+|+|.+|.+.++.++..|+ +|+++++++++.+. +++++.+.. ..++    +.+.+
T Consensus         6 ~sv~~~a~-~~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~~~~~~-~~~~----~~~~~   78 (144)
T 3oj0_A            6 VSIPSIVY-DIVRKNGGNKILLVGNGMLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKYEYEYV-LIND----IDSLI   78 (144)
T ss_dssp             CSHHHHHH-HHHHHHCCCEEEEECCSHHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHHTCEEE-ECSC----HHHHH
T ss_pred             ccHHHHHH-HHHHhccCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHhCCceE-eecC----HHHHh
Confidence            44555553 33333458999999999999999999988999 49999999888655 566775432 2222    33322


Q ss_pred             HHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          252 AEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       252 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                           .++|+|+.+++.+.... ....++++ ..++.++.+
T Consensus        79 -----~~~Divi~at~~~~~~~-~~~~l~~g-~~vid~~~p  112 (144)
T 3oj0_A           79 -----KNNDVIITATSSKTPIV-EERSLMPG-KLFIDLGNP  112 (144)
T ss_dssp             -----HTCSEEEECSCCSSCSB-CGGGCCTT-CEEEECCSS
T ss_pred             -----cCCCEEEEeCCCCCcEe-eHHHcCCC-CEEEEccCC
Confidence                 15899999998753222 22567775 777777653

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.82  E-value=7.3e-05  Score=65.50  Aligned_cols=105  Identities=21%  Similarity=0.187  Sum_probs=73.5

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHhc----CCceeecCCCCCccHHHHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEM  254 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~l----g~~~vi~~~~~~~~~~~~~~~~  254 (373)
                      +.....+.++++||-+|+|. |..++.+++..+ ..+|++++.+++..+.+++.    |...-+.....+  +.+   ..
T Consensus        85 i~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~---~~  158 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKD--IYE---GI  158 (255)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSC--GGG---CC
T ss_pred             HHHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECc--hhh---cc
Confidence            34567788999999999986 888889998853 34999999999888877653    543211111111  111   11


Q ss_pred             cCCCccEEEEccCCh-HhHHHHHHHhhcCCcEEEEEcC
Q 017336          255 TNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       255 ~~~~~d~vid~~g~~-~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..+.+|+|+.....+ ..+..+.+.|+++ |+++.+..
T Consensus       159 ~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  195 (255)
T 3mb5_A          159 EEENVDHVILDLPQPERVVEHAAKALKPG-GFFVAYTP  195 (255)
T ss_dssp             CCCSEEEEEECSSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             CCCCcCEEEECCCCHHHHHHHHHHHcCCC-CEEEEEEC
Confidence            223799999877664 4789999999997 99988743

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.73  E-value=0.00049  Score=54.34  Aligned_cols=94  Identities=13%  Similarity=0.146  Sum_probs=66.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      .++|+|+|.|.+|...++.++..|. .|+++++++++.+.+++.|...+.- +..+   .+.+.+..-.++|+++.+++.
T Consensus         7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~g-d~~~---~~~l~~a~i~~ad~vi~~~~~   81 (140)
T 3fwz_A            7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVLG-NAAN---EEIMQLAHLECAKWLILTIPN   81 (140)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEES-CTTS---HHHHHHTTGGGCSEEEECCSC
T ss_pred             CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEEC-CCCC---HHHHHhcCcccCCEEEEECCC
Confidence            4689999999999999999999999 8999999999999999888865432 2222   122333322279999999997


Q ss_pred             hHhH---HHHHHHhhcCCcEEEE
Q 017336          269 IDNM---ISAFECVHDGWGVAVL  288 (373)
Q Consensus       269 ~~~~---~~~~~~l~~~~g~~v~  288 (373)
                      ...-   ....+.+.+. .+++.
T Consensus        82 ~~~n~~~~~~a~~~~~~-~~iia  103 (140)
T 3fwz_A           82 GYEAGEIVASARAKNPD-IEIIA  103 (140)
T ss_dssp             HHHHHHHHHHHHHHCSS-SEEEE
T ss_pred             hHHHHHHHHHHHHHCCC-CeEEE
Confidence            5422   2344555554 55544

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.71  E-value=0.00036  Score=57.84  Aligned_cols=87  Identities=15%  Similarity=0.282  Sum_probs=63.3

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHhcCCceee-cCCCCCccHHHHHHHHcC-CCccEEEEc
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFV-NTSEHDRPIQEVIAEMTN-GGVDRSVEC  265 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~~~~lg~~~vi-~~~~~~~~~~~~~~~~~~-~~~d~vid~  265 (373)
                      +++|+|+|.|.+|..+++.++.. |. .|+++++++++.+.+++.|...+. +..+     .+.+.+.++ .++|+|+.+
T Consensus        39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~gd~~~-----~~~l~~~~~~~~ad~vi~~  112 (183)
T 3c85_A           39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISGDATD-----PDFWERILDTGHVKLVLLA  112 (183)
T ss_dssp             TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEECCTTC-----HHHHHTBCSCCCCCEEEEC
T ss_pred             CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEcCCCC-----HHHHHhccCCCCCCEEEEe
Confidence            56899999999999999999998 98 799999999999999888876543 2222     122333312 379999999


Q ss_pred             cCChHhHHHHHHHhhc
Q 017336          266 TGNIDNMISAFECVHD  281 (373)
Q Consensus       266 ~g~~~~~~~~~~~l~~  281 (373)
                      +++......+...++.
T Consensus       113 ~~~~~~~~~~~~~~~~  128 (183)
T 3c85_A          113 MPHHQGNQTALEQLQR  128 (183)
T ss_dssp             CSSHHHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHH
Confidence            9985544444444443

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.69  E-value=8e-05  Score=70.76  Aligned_cols=91  Identities=23%  Similarity=0.292  Sum_probs=71.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      -.|++++|+|+|.+|.++++.++..|+ +|+++++++.+.+.+...+++ +.+.++           . ...+|+++++.
T Consensus       263 L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~g~d-v~~lee-----------~-~~~aDvVi~at  328 (488)
T 3ond_A          263 IAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQATMEGLQ-VLTLED-----------V-VSEADIFVTTT  328 (488)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECCGGG-----------T-TTTCSEEEECS
T ss_pred             ccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhCCc-cCCHHH-----------H-HHhcCEEEeCC
Confidence            478999999999999999999999999 899999998888777777763 221111           1 12689999999


Q ss_pred             CChHhHH-HHHHHhhcCCcEEEEEcCC
Q 017336          267 GNIDNMI-SAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       267 g~~~~~~-~~~~~l~~~~g~~v~~g~~  292 (373)
                      |....+. ..++.++++ +.++..|..
T Consensus       329 G~~~vl~~e~l~~mk~g-aiVvNaG~~  354 (488)
T 3ond_A          329 GNKDIIMLDHMKKMKNN-AIVCNIGHF  354 (488)
T ss_dssp             SCSCSBCHHHHTTSCTT-EEEEESSST
T ss_pred             CChhhhhHHHHHhcCCC-eEEEEcCCC
Confidence            9766554 488889997 888888865

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.68  E-value=0.00012  Score=65.89  Aligned_cols=95  Identities=20%  Similarity=0.257  Sum_probs=72.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      -.+++|+|+|+|.+|..+++.++.+|+ +|++.+++.++.+.+.++|... ++..        .+.+.. ...|+|+.++
T Consensus       155 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~-~~~~--------~l~~~l-~~aDvVi~~~  223 (300)
T 2rir_A          155 IHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLVP-FHTD--------ELKEHV-KDIDICINTI  223 (300)
T ss_dssp             STTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCEE-EEGG--------GHHHHS-TTCSEEEECC
T ss_pred             CCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCeE-Echh--------hHHHHh-hCCCEEEECC
Confidence            468999999999999999999999999 8999999988877777777642 2211        122332 2689999999


Q ss_pred             CChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          267 GNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       267 g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +....-...++.++++ +.++.++...
T Consensus       224 p~~~i~~~~~~~mk~g-~~lin~a~g~  249 (300)
T 2rir_A          224 PSMILNQTVLSSMTPK-TLILDLASRP  249 (300)
T ss_dssp             SSCCBCHHHHTTSCTT-CEEEECSSTT
T ss_pred             ChhhhCHHHHHhCCCC-CEEEEEeCCC
Confidence            8633334677888997 8998888654

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.66  E-value=0.00025  Score=66.33  Aligned_cols=93  Identities=25%  Similarity=0.243  Sum_probs=72.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      .-.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|... .+       +.+    ... ..|+|+.+
T Consensus       244 ~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~v-v~-------LeE----lL~-~ADIVv~a  309 (464)
T 3n58_A          244 MMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFEV-VT-------LDD----AAS-TADIVVTT  309 (464)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEE-CC-------HHH----HGG-GCSEEEEC
T ss_pred             cccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCcee-cc-------HHH----HHh-hCCEEEEC
Confidence            4578999999999999999999999999 8999998887766666667642 21       322    222 58999999


Q ss_pred             cCChHhH-HHHHHHhhcCCcEEEEEcCCC
Q 017336          266 TGNIDNM-ISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       266 ~g~~~~~-~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      .+....+ ...+..|+++ +.++.+|...
T Consensus       310 tgt~~lI~~e~l~~MK~G-AILINvGRgd  337 (464)
T 3n58_A          310 TGNKDVITIDHMRKMKDM-CIVGNIGHFD  337 (464)
T ss_dssp             CSSSSSBCHHHHHHSCTT-EEEEECSSST
T ss_pred             CCCccccCHHHHhcCCCC-eEEEEcCCCC
Confidence            9875554 5889999997 9998888654

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.65  E-value=3e-05  Score=71.14  Aligned_cols=104  Identities=18%  Similarity=0.214  Sum_probs=68.2

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHhc----C-----------Cce--eecCCC
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKF----G-----------VTD--FVNTSE  242 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~l----g-----------~~~--vi~~~~  242 (373)
                      .....+.++++||-+|+|. |..++.+++..|. .+|++++.+++..+.+++.    +           ...  ++..+-
T Consensus        98 l~~l~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~  176 (336)
T 2b25_A           98 LSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDI  176 (336)
T ss_dssp             HHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCT
T ss_pred             HHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECCh
Confidence            4455788999999999977 8888888888763 4899999999888777652    1           011  121111


Q ss_pred             CCccHHHHHHHHcCCCccEEEEccCCh-HhHHHHHHHhhcCCcEEEEEcC
Q 017336          243 HDRPIQEVIAEMTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       243 ~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      .+  .   ...+..+.||+|+-....+ ..+..+.+.|+++ |+++.+..
T Consensus       177 ~~--~---~~~~~~~~fD~V~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  220 (336)
T 2b25_A          177 SG--A---TEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYVV  220 (336)
T ss_dssp             TC--C---C-------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEES
T ss_pred             HH--c---ccccCCCCeeEEEECCCCHHHHHHHHHHhcCCC-cEEEEEeC
Confidence            11  0   1112223699988765544 4588999999997 99987654

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.64  E-value=0.00014  Score=64.58  Aligned_cols=105  Identities=21%  Similarity=0.274  Sum_probs=72.5

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHhc-----C--CceeecCCCCCccHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKF-----G--VTDFVNTSEHDRPIQEVI  251 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~l-----g--~~~vi~~~~~~~~~~~~~  251 (373)
                      +.....+.++++||-+|+| .|..++.+++..+ ..+|++++.+++..+.+++.     |  .+.+- ....+  +.+. 
T Consensus        91 i~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~-~~~~d--~~~~-  165 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWR-LVVSD--LADS-  165 (280)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEE-EECSC--GGGC-
T ss_pred             HHHHcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEE-EEECc--hHhc-
Confidence            3455678899999999998 6888889998763 33899999999888877653     4  22221 11111  1000 


Q ss_pred             HHHcCCCccEEEEccCCh-HhHHHHHHHhhcCCcEEEEEcC
Q 017336          252 AEMTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       252 ~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                       ....+.+|+|+.....+ ..+..+.+.|+++ |+++++..
T Consensus       166 -~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  204 (280)
T 1i9g_A          166 -ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYVA  204 (280)
T ss_dssp             -CCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             -CCCCCceeEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeC
Confidence             01123799999876655 6788999999997 99888754

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=97.63  E-value=0.00014  Score=63.68  Aligned_cols=105  Identities=14%  Similarity=0.071  Sum_probs=73.6

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHhc-----CCceeecCCCCCccHHHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKF-----GVTDFVNTSEHDRPIQEVIAE  253 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~l-----g~~~vi~~~~~~~~~~~~~~~  253 (373)
                      +.....+.++++||-+|+|. |..++.+++..+ ..+|++++.+++..+.+++.     |.+.+- ....+  +.+.  .
T Consensus        88 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~-~~~~d--~~~~--~  161 (258)
T 2pwy_A           88 MVTLLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVR-FHLGK--LEEA--E  161 (258)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEE-EEESC--GGGC--C
T ss_pred             HHHHcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEE-EEECc--hhhc--C
Confidence            34556788999999999985 888899998864 23999999999988887663     533221 11111  1100  0


Q ss_pred             HcCCCccEEEEccCCh-HhHHHHHHHhhcCCcEEEEEcC
Q 017336          254 MTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       254 ~~~~~~d~vid~~g~~-~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      +..+.+|+|+.....+ ..+..+.+.|+++ |+++++..
T Consensus       162 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  199 (258)
T 2pwy_A          162 LEEAAYDGVALDLMEPWKVLEKAALALKPD-RFLVAYLP  199 (258)
T ss_dssp             CCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             CCCCCcCEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeC
Confidence            1123799999876665 6789999999997 99988754

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.52  E-value=0.00095  Score=52.58  Aligned_cols=77  Identities=18%  Similarity=0.290  Sum_probs=57.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      .++|+|+|+|.+|...++.+...|. .|+++++++++.+.+++.+...+. -+..+   .+.+.+..-.++|++|.++++
T Consensus         6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~~~~-gd~~~---~~~l~~~~~~~~d~vi~~~~~   80 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFDAVI-ADPTD---ESFYRSLDLEGVSAVLITGSD   80 (141)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEE-CCTTC---HHHHHHSCCTTCSEEEECCSC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCcEEE-CCCCC---HHHHHhCCcccCCEEEEecCC
Confidence            4679999999999999999999999 899999999999988887765432 22222   123333322379999999997


Q ss_pred             hH
Q 017336          269 ID  270 (373)
Q Consensus       269 ~~  270 (373)
                      .+
T Consensus        81 ~~   82 (141)
T 3llv_A           81 DE   82 (141)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.51  E-value=0.0018  Score=56.35  Aligned_cols=103  Identities=16%  Similarity=0.055  Sum_probs=68.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee---ecCCCCC--ccHHHHHHHHcCCCccEE
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF---VNTSEHD--RPIQEVIAEMTNGGVDRS  262 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v---i~~~~~~--~~~~~~~~~~~~~~~d~v  262 (373)
                      +++|||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+-+....   .|..+.+  ..+.+.+.+.. +++|++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~-g~iDiL   79 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKL-QRIDVL   79 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCCEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHc-CCCCEE
Confidence            478999987 8999999999999999 89999999988877766554332   2222211  11222333333 379999


Q ss_pred             EEccCCh----------H---------------hHHHHHHHhhcCCcEEEEEcCCC
Q 017336          263 VECTGNI----------D---------------NMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       263 id~~g~~----------~---------------~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +++.|..          +               ....+.+.|..++|+++.+++..
T Consensus        80 VNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~  135 (247)
T 3ged_A           80 VNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTR  135 (247)
T ss_dssp             EECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGG
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecc
Confidence            9988731          1               22344455544349999988753

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.38  E-value=0.00042  Score=60.06  Aligned_cols=102  Identities=15%  Similarity=0.090  Sum_probs=66.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-eecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~-vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      .|+++||+|+ +++|.++++.+...|+ +|+++++++++.+....-.+.. ..|..+.  +-.+.+-+.. +++|+++++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~--~~v~~~~~~~-g~iDiLVNN   85 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPRHPRIRREELDITDS--QRLQRLFEAL-PRLDVLVNN   85 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCCCTTEEEEECCTTCH--HHHHHHHHHC-SCCSEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhhcCCeEEEEecCCCH--HHHHHHHHhc-CCCCEEEEC
Confidence            5899999987 8999999999999999 8999999877654322211111 1232222  1233333333 479999999


Q ss_pred             cCCh-----------------------HhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          266 TGNI-----------------------DNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       266 ~g~~-----------------------~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      .|..                       -..+.+...|+.++|++|.+++..
T Consensus        86 AGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~  136 (242)
T 4b79_A           86 AGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMY  136 (242)
T ss_dssp             CCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGG
T ss_pred             CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeecc
Confidence            8742                       122345566654349999998753

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.33  E-value=0.00067  Score=53.34  Aligned_cols=76  Identities=13%  Similarity=0.278  Sum_probs=54.8

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      +++|+|+|+|.+|...++.+...|. +|+++++++++.+.+++.+...+. .+..+   .+.+.+..-+++|+|+.+++.
T Consensus         6 ~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~-~d~~~---~~~l~~~~~~~~d~vi~~~~~   80 (144)
T 2hmt_A            6 NKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVI-ANATE---ENELLSLGIRNFEYVIVAIGA   80 (144)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTTCSEEEE-CCTTC---HHHHHTTTGGGCSEEEECCCS
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCEEEE-eCCCC---HHHHHhcCCCCCCEEEECCCC
Confidence            4679999999999999999999998 788999988887777666654332 12111   123333212379999999997


Q ss_pred             h
Q 017336          269 I  269 (373)
Q Consensus       269 ~  269 (373)
                      +
T Consensus        81 ~   81 (144)
T 2hmt_A           81 N   81 (144)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.29  E-value=0.0016  Score=56.13  Aligned_cols=97  Identities=19%  Similarity=0.200  Sum_probs=66.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC-cee-ecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-TDF-VNTSEHDRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~-~~v-i~~~~~~~~~~~~~~~~~~~~~d~vid  264 (373)
                      .+++|||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+.++ ..+ .|..       +.+.+... ++|+||+
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-------~~~~~~~~-~~D~vi~   90 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANLE-------EDFSHAFA-SIDAVVF   90 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCTT-------SCCGGGGT-TCSEEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEcccH-------HHHHHHHc-CCCEEEE
Confidence            4689999998 9999999999999998 89999999998888777776 443 2332       11223333 7999999


Q ss_pred             ccCChH-------------hHHHHHHHhhc-CCcEEEEEcCCC
Q 017336          265 CTGNID-------------NMISAFECVHD-GWGVAVLVGVPS  293 (373)
Q Consensus       265 ~~g~~~-------------~~~~~~~~l~~-~~g~~v~~g~~~  293 (373)
                      +.|...             .....++.+.. +.++++.++...
T Consensus        91 ~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  133 (236)
T 3e8x_A           91 AAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVG  133 (236)
T ss_dssp             CCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence            988521             11223333332 227899888754

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.22  E-value=0.00068  Score=63.44  Aligned_cols=91  Identities=23%  Similarity=0.271  Sum_probs=70.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      -.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|...+      +  +    .+... ..|+|+.+.
T Consensus       209 L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p~~a~~A~~~G~~~~------s--L----~eal~-~ADVVilt~  274 (436)
T 3h9u_A          209 IAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDPINALQAAMEGYQVL------L--V----EDVVE-EAHIFVTTT  274 (436)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC------C--H----HHHTT-TCSEEEECS
T ss_pred             ccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCChhhhHHHHHhCCeec------C--H----HHHHh-hCCEEEECC
Confidence            468999999999999999999999999 89999999888777777776422      1  2    22222 589999988


Q ss_pred             CChHhHH-HHHHHhhcCCcEEEEEcCC
Q 017336          267 GNIDNMI-SAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       267 g~~~~~~-~~~~~l~~~~g~~v~~g~~  292 (373)
                      +....+. ..++.|+++ ..++.+|..
T Consensus       275 gt~~iI~~e~l~~MK~g-AIVINvgRg  300 (436)
T 3h9u_A          275 GNDDIITSEHFPRMRDD-AIVCNIGHF  300 (436)
T ss_dssp             SCSCSBCTTTGGGCCTT-EEEEECSSS
T ss_pred             CCcCccCHHHHhhcCCC-cEEEEeCCC
Confidence            8655544 678889997 888887743

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.20  E-value=0.0022  Score=56.36  Aligned_cols=79  Identities=16%  Similarity=0.293  Sum_probs=49.6

Q ss_pred             CCCEEEEECC-CH--HHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc--ee--ecCCCCCccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL-GA--VGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT--DF--VNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~--~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~--~v--i~~~~~~~~~~~~~~~~~~  256 (373)
                      .++++||+|+ |.  +|.+.++.+...|+ +|++++++++..+.+++    ++..  .+  .|..+.+ .+.+.+.+...
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~   83 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDA-EIETCFASIKE   83 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSH-HHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHH-HHHHHHHHHHH
Confidence            4689999986 55  99999998888999 89988887655444433    3331  12  2333221 22222222211


Q ss_pred             --CCccEEEEccCC
Q 017336          257 --GGVDRSVECTGN  268 (373)
Q Consensus       257 --~~~d~vid~~g~  268 (373)
                        +++|+++++.|.
T Consensus        84 ~~g~id~li~~Ag~   97 (266)
T 3oig_A           84 QVGVIHGIAHCIAF   97 (266)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HhCCeeEEEEcccc
Confidence              379999999873

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.19  E-value=0.0013  Score=55.54  Aligned_cols=100  Identities=22%  Similarity=0.263  Sum_probs=70.3

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc-e--eecCCCCCccHHHHHHH
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-D--FVNTSEHDRPIQEVIAE  253 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~-~--vi~~~~~~~~~~~~~~~  253 (373)
                      .....+.++++||-+|+|. |..++.+++. +. +|++++.+++..+.+++    +|.+ .  ++..+..     +.+. 
T Consensus        48 l~~l~~~~~~~vLDlGcG~-G~~~~~la~~-~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~-----~~~~-  118 (204)
T 3njr_A           48 LAALAPRRGELLWDIGGGS-GSVSVEWCLA-GG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAP-----AALA-  118 (204)
T ss_dssp             HHHHCCCTTCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTT-----GGGT-
T ss_pred             HHhcCCCCCCEEEEecCCC-CHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchh-----hhcc-
Confidence            4456778899999999986 8888888888 76 89999999998887754    4554 2  2221111     1011 


Q ss_pred             HcCCCccEEEEccCCh-HhHHHHHHHhhcCCcEEEEEcC
Q 017336          254 MTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       254 ~~~~~~d~vid~~g~~-~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                       ..+.+|+|+...+.. ..+..+.+.|+++ |++++...
T Consensus       119 -~~~~~D~v~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  155 (204)
T 3njr_A          119 -DLPLPEAVFIGGGGSQALYDRLWEWLAPG-TRIVANAV  155 (204)
T ss_dssp             -TSCCCSEEEECSCCCHHHHHHHHHHSCTT-CEEEEEEC
T ss_pred             -cCCCCCEEEECCcccHHHHHHHHHhcCCC-cEEEEEec
Confidence             112699999765432 3788999999997 99987654

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=97.16  E-value=0.0019  Score=53.68  Aligned_cols=100  Identities=19%  Similarity=0.148  Sum_probs=65.5

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC---------cEEEEEcCChhHHHHHHhcCCceee-cCCCCCccHHHHHHHH
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAGA---------SRIIGVDRSSKRFEEAKKFGVTDFV-NTSEHDRPIQEVIAEM  254 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~---------~~V~~~~~~~~~~~~~~~lg~~~vi-~~~~~~~~~~~~~~~~  254 (373)
                      .++++++||-+|+|. |..++.+++..+.         .+|++++.++.+.    .-++ .++ ..+-....+.+.+.+.
T Consensus        19 ~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~----~~~~-~~~~~~d~~~~~~~~~~~~~   92 (196)
T 2nyu_A           19 ILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP----LEGA-TFLCPADVTDPRTSQRILEV   92 (196)
T ss_dssp             CCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC----CTTC-EEECSCCTTSHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc----CCCC-eEEEeccCCCHHHHHHHHHh
Confidence            367899999999988 8999999999874         4899999887431    0112 222 2221121233344444


Q ss_pred             cCC-CccEEEE-----ccCCh------------HhHHHHHHHhhcCCcEEEEEcC
Q 017336          255 TNG-GVDRSVE-----CTGNI------------DNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       255 ~~~-~~d~vid-----~~g~~------------~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      .++ .||+|+.     +++..            ..+..+.+.|+++ |++++.-.
T Consensus        93 ~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  146 (196)
T 2nyu_A           93 LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG-GTFLCKTW  146 (196)
T ss_dssp             SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCC-CEEEEEec
Confidence            444 7999994     33332            4577889999997 99987633

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.15  E-value=0.0012  Score=54.04  Aligned_cols=104  Identities=18%  Similarity=0.196  Sum_probs=71.5

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc-eeecCCCCCccHHHHHHHHc
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~-~vi~~~~~~~~~~~~~~~~~  255 (373)
                      .....+.++++||-+|+|. |..++.+++..+..+|++++.+++..+.+++    .+.. .++ ...+   ..+.+.. .
T Consensus        18 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~-~~~d---~~~~~~~-~   91 (178)
T 3hm2_A           18 ISALAPKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIA-VQQG---APRAFDD-V   91 (178)
T ss_dssp             HHHHCCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEE-EECC---TTGGGGG-C
T ss_pred             HHHhcccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEE-Eecc---hHhhhhc-c
Confidence            3445678899999999986 8889999988744499999999988887764    4554 231 1111   1111111 1


Q ss_pred             CCCccEEEEccCCh--HhHHHHHHHhhcCCcEEEEEcC
Q 017336          256 NGGVDRSVECTGNI--DNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       256 ~~~~d~vid~~g~~--~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      .+.+|+|+......  ..+..+.+.|+++ |++++...
T Consensus        92 ~~~~D~i~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  128 (178)
T 3hm2_A           92 PDNPDVIFIGGGLTAPGVFAAAWKRLPVG-GRLVANAV  128 (178)
T ss_dssp             CSCCSEEEECC-TTCTTHHHHHHHTCCTT-CEEEEEEC
T ss_pred             CCCCCEEEECCcccHHHHHHHHHHhcCCC-CEEEEEee
Confidence            14799999765432  4789999999997 99987654

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=97.10  E-value=0.0015  Score=59.14  Aligned_cols=103  Identities=16%  Similarity=0.187  Sum_probs=72.2

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCceeecCCCCCccHHHHHHHHc
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l----g~~~vi~~~~~~~~~~~~~~~~~  255 (373)
                      +.+...+.++++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++.    |...-+.....+  +    .+. 
T Consensus        82 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~----~~~-  152 (318)
T 2fk8_A           82 NLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQG--W----EDF-  152 (318)
T ss_dssp             HHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC--G----GGC-
T ss_pred             HHHhcCCCCcCEEEEEcccc-hHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC--h----HHC-
Confidence            44556788999999999977 8888899988888 999999999988887653    432111111111  1    111 


Q ss_pred             CCCccEEEEc-----cCC---hHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          256 NGGVDRSVEC-----TGN---IDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       256 ~~~~d~vid~-----~g~---~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ++.+|+|+..     .+.   ...+..+.+.|+|+ |++++....
T Consensus       153 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~  196 (318)
T 2fk8_A          153 AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQSSV  196 (318)
T ss_dssp             CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEEEE
T ss_pred             CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCC-cEEEEEEec
Confidence            2479999976     322   35678889999997 999876544

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.08  E-value=0.0032  Score=55.20  Aligned_cols=103  Identities=16%  Similarity=0.037  Sum_probs=66.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH---HhcCCcee---ecCCCCC--ccHHHHHHHHcCCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA---KKFGVTDF---VNTSEHD--RPIQEVIAEMTNGG  258 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~---~~lg~~~v---i~~~~~~--~~~~~~~~~~~~~~  258 (373)
                      .|+++||+|+ +++|.++++.+...|+ +|+++++++++.+.+   ++.+....   .|..+.+  ..+.+.+.+.. |+
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~-G~   83 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF-GR   83 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh-CC
Confidence            5789999987 8999999998889999 888888876654433   33444321   2332221  11223333333 37


Q ss_pred             ccEEEEccCCh---------H---------------hHHHHHHHhhcCCcEEEEEcCC
Q 017336          259 VDRSVECTGNI---------D---------------NMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       259 ~d~vid~~g~~---------~---------------~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      +|+++++.|..         +               ....++..|+.++|++|.+++.
T Consensus        84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~  141 (258)
T 4gkb_A           84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSK  141 (258)
T ss_dssp             CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCT
T ss_pred             CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeeh
Confidence            99999998741         1               2334555665444999999875

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.06  E-value=0.0037  Score=54.53  Aligned_cols=103  Identities=19%  Similarity=0.220  Sum_probs=64.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCce-ee--cCCCCCccHHHHHH---HHcCCCc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-FV--NTSEHDRPIQEVIA---EMTNGGV  259 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~-vi--~~~~~~~~~~~~~~---~~~~~~~  259 (373)
                      .++++||+|+ |.+|.+.+..+...|+ +|+++++++++.+.+ ++++... .+  |..+. ..+.+.+.   +.. +++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~-g~i   81 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSE-ADWTLVMAAVQRRL-GTL   81 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCH-HHHHHHHHHHHHHH-CSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEEEccCCCH-HHHHHHHHHHHHHc-CCC
Confidence            4688999987 8999999999988999 899999988776554 3444332 22  22221 11222222   222 368


Q ss_pred             cEEEEccCCh----------H---------------hHHHHHHHhhcCCcEEEEEcCCC
Q 017336          260 DRSVECTGNI----------D---------------NMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       260 d~vid~~g~~----------~---------------~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      |++|++.|..          +               ....+++.+....|+++.+++..
T Consensus        82 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~  140 (253)
T 1hxh_A           82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVS  140 (253)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchh
Confidence            9999998741          1               12244455544228999888653

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=97.06  E-value=0.00096  Score=57.74  Aligned_cols=103  Identities=14%  Similarity=0.098  Sum_probs=70.4

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHc---
Q 017336          184 AKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT---  255 (373)
Q Consensus       184 ~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~---  255 (373)
                      ....++++||-+|+| .|..++.+++..+ ..+|++++.+++..+.+++    .|...-+.....+  ..+.+....   
T Consensus        56 ~~~~~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d--~~~~~~~~~~~~  132 (239)
T 2hnk_A           56 TKISGAKRIIEIGTF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGS--ALETLQVLIDSK  132 (239)
T ss_dssp             HHHHTCSEEEEECCT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHCS
T ss_pred             HHhhCcCEEEEEeCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECC--HHHHHHHHHhhc
Confidence            345578899999988 4888889999874 2389999999988877765    3543211111122  333333331   


Q ss_pred             -----------C-CCccEEEEccCCh---HhHHHHHHHhhcCCcEEEEEc
Q 017336          256 -----------N-GGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       256 -----------~-~~~d~vid~~g~~---~~~~~~~~~l~~~~g~~v~~g  290 (373)
                                 . +.||+|+......   ..+..+.+.|+++ |+++...
T Consensus       133 ~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  181 (239)
T 2hnk_A          133 SAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPG-GLLIADN  181 (239)
T ss_dssp             SCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             ccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCC-eEEEEEc
Confidence                       2 5799999876544   5668889999997 9988754

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.05  E-value=0.0087  Score=46.54  Aligned_cols=77  Identities=18%  Similarity=0.256  Sum_probs=53.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      +.+|+|+|+|.+|...++.+...|. +|+++++++++.+.+++ ++...+. .+..+  . +.+.+..-.++|+||.+++
T Consensus         4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~~-~d~~~--~-~~l~~~~~~~~d~vi~~~~   78 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVIN-GDCTK--I-KTLEDAGIEDADMYIAVTG   78 (140)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEEE-SCTTS--H-HHHHHTTTTTCSEEEECCS
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcCcEEEE-cCCCC--H-HHHHHcCcccCCEEEEeeC
Confidence            3579999999999999999988998 89999999888777664 5654332 11111  1 2233221237999999998


Q ss_pred             ChH
Q 017336          268 NID  270 (373)
Q Consensus       268 ~~~  270 (373)
                      ...
T Consensus        79 ~~~   81 (140)
T 1lss_A           79 KEE   81 (140)
T ss_dssp             CHH
T ss_pred             Cch
Confidence            753

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.05  E-value=0.0041  Score=55.04  Aligned_cols=77  Identities=25%  Similarity=0.377  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCC-ce--ee--cCCCCCccHHHHHH---HH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGV-TD--FV--NTSEHDRPIQEVIA---EM  254 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~-~~--vi--~~~~~~~~~~~~~~---~~  254 (373)
                      .++++||+|+ |.+|.++++.+...|+ +|++++++.++.+.+.    +.+. ..  ++  |..+.+ .+.+.+.   +.
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~  108 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEE-DILSMFSAIRSQ  108 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHH-HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHH-HHHHHHHHHHHh
Confidence            4689999987 8999999999989999 8999999877655432    2332 11  22  322211 1222222   22


Q ss_pred             cCCCccEEEEccC
Q 017336          255 TNGGVDRSVECTG  267 (373)
Q Consensus       255 ~~~~~d~vid~~g  267 (373)
                      . +++|++|++.|
T Consensus       109 ~-g~iD~vi~~Ag  120 (279)
T 1xg5_A          109 H-SGVDICINNAG  120 (279)
T ss_dssp             H-CCCSEEEECCC
T ss_pred             C-CCCCEEEECCC
Confidence            2 37999999987

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.03  E-value=0.005  Score=52.28  Aligned_cols=99  Identities=10%  Similarity=0.073  Sum_probs=63.1

Q ss_pred             CEEEEECC-CHHHHHHHHHHH-HcCCcEEEEEcCChh-HHHHHHhcCCc-eeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          190 SSVAVFGL-GAVGLAAAEGAR-IAGASRIIGVDRSSK-RFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~-~~g~~~V~~~~~~~~-~~~~~~~lg~~-~vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      ++|||+|+ |.+|...++.+. ..|+ +|++++++++ +.+.+.+.+.. .++..+-.+   .+.+.+... ++|++|++
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d---~~~~~~~~~-~~d~vv~~   80 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDHERVTVIEGSFQN---PGXLEQAVT-NAEVVFVG   80 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTSTTEEEEECCTTC---HHHHHHHHT-TCSEEEES
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCCCceEEEECCCCC---HHHHHHHHc-CCCEEEEc
Confidence            56999997 999999988887 8999 8999999887 66555322222 122111112   123444333 68999999


Q ss_pred             cCChHh-HHHHHHHhhcC-CcEEEEEcCCC
Q 017336          266 TGNIDN-MISAFECVHDG-WGVAVLVGVPS  293 (373)
Q Consensus       266 ~g~~~~-~~~~~~~l~~~-~g~~v~~g~~~  293 (373)
                      .|..+. ....++.+... .++++.++...
T Consensus        81 ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~  110 (221)
T 3r6d_A           81 AMESGSDMASIVKALSRXNIRRVIGVSMAG  110 (221)
T ss_dssp             CCCCHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred             CCCCChhHHHHHHHHHhcCCCeEEEEeece
Confidence            986321 34455555442 26888887654

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.02  E-value=0.006  Score=51.10  Aligned_cols=102  Identities=16%  Similarity=0.164  Sum_probs=71.8

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce--eecCCCCCccHHHHHHHH
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD--FVNTSEHDRPIQEVIAEM  254 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~--vi~~~~~~~~~~~~~~~~  254 (373)
                      .....++++++||-+|+|. |..++.+++.....+|++++.+++..+.+++    .+.+.  ++..+..+  .   +.  
T Consensus        33 l~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~--~---~~--  104 (204)
T 3e05_A           33 LSKLRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPE--G---LD--  104 (204)
T ss_dssp             HHHTTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTT--T---CT--
T ss_pred             HHHcCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhh--h---hh--
Confidence            4456788999999999985 8888899988644499999999998888765    34432  22211111  0   00  


Q ss_pred             cCCCccEEEEccC---ChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          255 TNGGVDRSVECTG---NIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       255 ~~~~~d~vid~~g---~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..+.+|+|+....   -...+..+.+.|+++ |+++....
T Consensus       105 ~~~~~D~i~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  143 (204)
T 3e05_A          105 DLPDPDRVFIGGSGGMLEEIIDAVDRRLKSE-GVIVLNAV  143 (204)
T ss_dssp             TSCCCSEEEESCCTTCHHHHHHHHHHHCCTT-CEEEEEEC
T ss_pred             cCCCCCEEEECCCCcCHHHHHHHHHHhcCCC-eEEEEEec
Confidence            1136999998755   236788999999997 99988644

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.02  E-value=0.0067  Score=53.37  Aligned_cols=78  Identities=26%  Similarity=0.331  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCcee-e--cCCCCCccHHH---HHHHHcCCCc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF-V--NTSEHDRPIQE---VIAEMTNGGV  259 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~v-i--~~~~~~~~~~~---~~~~~~~~~~  259 (373)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++++.... +  |..+.+ .+.+   .+.+.. +++
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~-g~i  102 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANLSDRK-SIKQLAEVAEREM-EGI  102 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHH-HHHHHHHHHHHHH-TSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHH-HHHHHHHHHHHHc-CCC
Confidence            4689999987 8999999999999999 899999988776654 44555432 2  222211 1222   222222 379


Q ss_pred             cEEEEccCC
Q 017336          260 DRSVECTGN  268 (373)
Q Consensus       260 d~vid~~g~  268 (373)
                      |++|++.|.
T Consensus       103 D~lvnnAg~  111 (266)
T 3grp_A          103 DILVNNAGI  111 (266)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.01  E-value=0.0065  Score=51.56  Aligned_cols=92  Identities=20%  Similarity=0.182  Sum_probs=63.7

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          191 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       191 ~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      +|||+|+ |.+|...+..+...|. +|++++++.++.+.+...++..+ .|..+.+  .     +.. +++|+||++.|.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~--~-----~~~-~~~d~vi~~ag~   72 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVATLVKEPLVLT--E-----ADL-DSVDAVVDALSV   72 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSEEEECCGGGCC--H-----HHH-TTCSEEEECCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCceEEeccccccc--H-----hhc-ccCCEEEECCcc
Confidence            5899998 9999999999999998 89999999888776655455433 2333332  2     122 379999999976


Q ss_pred             h----------HhHHHHHHHhhcCCcEEEEEcC
Q 017336          269 I----------DNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       269 ~----------~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      .          ......++.+...+++++.++.
T Consensus        73 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  105 (224)
T 3h2s_A           73 PWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG  105 (224)
T ss_dssp             CTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence            2          2234455555553378888864

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.01  E-value=0.0038  Score=55.10  Aligned_cols=103  Identities=20%  Similarity=0.275  Sum_probs=70.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCcee---ecCCCCC--ccHHHHHHHHcCCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF---VNTSEHD--RPIQEVIAEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~v---i~~~~~~--~~~~~~~~~~~~~~~d  260 (373)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++++.+ +++|....   .|..+.+  ..+.+.+.+.. |++|
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~iD  105 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEA-GRID  105 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH-SCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            5899999987 7999999999999999 899999998887654 55665432   2322211  11223333333 3799


Q ss_pred             EEEEccCCh-------------------------HhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          261 RSVECTGNI-------------------------DNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       261 ~vid~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +++++.|..                         .....+++.|+.+ |+++.+++..
T Consensus       106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~-G~IInisS~~  162 (273)
T 4fgs_A          106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG-SSVVLTGSTA  162 (273)
T ss_dssp             EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE-EEEEEECCGG
T ss_pred             EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CeEEEEeehh
Confidence            999998752                         1234556667775 9999887653

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.00  E-value=0.0049  Score=54.68  Aligned_cols=102  Identities=23%  Similarity=0.280  Sum_probs=63.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH-HH----HHHhcCCce-ee--cCCCCCccHHHHH---HHHc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FE----EAKKFGVTD-FV--NTSEHDRPIQEVI---AEMT  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~-~~----~~~~lg~~~-vi--~~~~~~~~~~~~~---~~~~  255 (373)
                      .++++||+|+ |++|.++++.+...|+ +|++++++.++ .+    .+++.+... .+  |..+. ..+.+.+   .+..
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~  105 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVV-EDIVRMFEEAVKIF  105 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            4688999987 8999999999999999 78888777543 22    233445432 22  22221 1122222   2222


Q ss_pred             CCCccEEEEccCCh----------H---------------hHHHHHHHhhcCCcEEEEEcCCC
Q 017336          256 NGGVDRSVECTGNI----------D---------------NMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       256 ~~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                       +++|++|++.|..          +               ..+.+.+.|... |+++.+++..
T Consensus       106 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~~  166 (283)
T 1g0o_A          106 -GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSIT  166 (283)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCGG
T ss_pred             -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CeEEEEechh
Confidence             3799999998742          1               123445555554 8999998743

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=97.00  E-value=0.003  Score=57.79  Aligned_cols=49  Identities=39%  Similarity=0.447  Sum_probs=42.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  236 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~  236 (373)
                      -.|++|.|.|.|.+|+.+++.++.+|+ +|++.+.+..+.+..++++++.
T Consensus       173 L~GktV~I~G~GnVG~~~A~~l~~~Ga-kVvvsD~~~~~~~~a~~~ga~~  221 (355)
T 1c1d_A          173 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTA  221 (355)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHhcCCEE
Confidence            478999999999999999999999999 8999988877766777777643

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.00  E-value=0.0041  Score=56.32  Aligned_cols=78  Identities=17%  Similarity=0.183  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCC--ce-e--ecCCCCCccHHHHHHHHc--
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV--TD-F--VNTSEHDRPIQEVIAEMT--  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~--~~-v--i~~~~~~~~~~~~~~~~~--  255 (373)
                      .+++|||+|+ |++|...+..+...|+ +|++++++.++.+.+.+    .+.  .. +  .|..+.+ .+.+.+.+..  
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~   84 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASRE-GFKMAADEVEAR   84 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHH-HHHHHHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHH-HHHHHHHHHHHh
Confidence            4689999997 8999999999989999 89999999877655432    232  11 2  2332211 1222222221  


Q ss_pred             CCCccEEEEccC
Q 017336          256 NGGVDRSVECTG  267 (373)
Q Consensus       256 ~~~~d~vid~~g  267 (373)
                      -+++|++|++.|
T Consensus        85 ~g~id~lv~nAg   96 (319)
T 3ioy_A           85 FGPVSILCNNAG   96 (319)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence            137999999988

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=97.00  E-value=0.00057  Score=58.87  Aligned_cols=104  Identities=18%  Similarity=0.187  Sum_probs=69.4

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCceeecCCCCCccHHHHHHHHc-CCC
Q 017336          184 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMT-NGG  258 (373)
Q Consensus       184 ~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l----g~~~vi~~~~~~~~~~~~~~~~~-~~~  258 (373)
                      ....++++||-+|+| .|..++.+++.....+|++++.+++..+.+++.    |...-+.....+  ..+.+.... .+.
T Consensus        50 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~~~~~~~~~~  126 (233)
T 2gpy_A           50 LKMAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGD--ALQLGEKLELYPL  126 (233)
T ss_dssp             HHHHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC--GGGSHHHHTTSCC
T ss_pred             HhccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECC--HHHHHHhcccCCC
Confidence            344578899999998 588888999987433999999999888877653    542111111111  212122222 347


Q ss_pred             ccEEEEccCC---hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          259 VDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       259 ~d~vid~~g~---~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ||+|+.....   ...+..+.+.|+++ |++++...
T Consensus       127 fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  161 (233)
T 2gpy_A          127 FDVLFIDAAKGQYRRFFDMYSPMVRPG-GLILSDNV  161 (233)
T ss_dssp             EEEEEEEGGGSCHHHHHHHHGGGEEEE-EEEEEETT
T ss_pred             ccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEEcC
Confidence            9999876553   36678889999997 99987643

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=96.98  E-value=0.0005  Score=59.39  Aligned_cols=101  Identities=21%  Similarity=0.206  Sum_probs=70.6

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcC
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~  256 (373)
                      .+...+.++++||.+|+| .|..++.+++..+ .+|++++.+++..+.+++    .|...+ .....+  .   ......
T Consensus        84 ~~~l~~~~~~~vLdiG~G-~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~d--~---~~~~~~  155 (235)
T 1jg1_A           84 LEIANLKPGMNILEVGTG-SGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNV-HVILGD--G---SKGFPP  155 (235)
T ss_dssp             HHHHTCCTTCCEEEECCT-TSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSE-EEEESC--G---GGCCGG
T ss_pred             HHhcCCCCCCEEEEEeCC-cCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCc-EEEECC--c---ccCCCC
Confidence            445578899999999998 6889999999887 489999999988777765    444322 111111  1   001111


Q ss_pred             C-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEc
Q 017336          257 G-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       257 ~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      + +||+|+....-......+.+.|+++ |++++.-
T Consensus       156 ~~~fD~Ii~~~~~~~~~~~~~~~L~pg-G~lvi~~  189 (235)
T 1jg1_A          156 KAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIPV  189 (235)
T ss_dssp             GCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             CCCccEEEECCcHHHHHHHHHHhcCCC-cEEEEEE
Confidence            2 5999998877656667889999997 8887653

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=96.95  E-value=0.0063  Score=52.72  Aligned_cols=78  Identities=24%  Similarity=0.295  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCC--c-eee--cCCCCCccHHHHHH---HHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGV--T-DFV--NTSEHDRPIQEVIA---EMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~--~-~vi--~~~~~~~~~~~~~~---~~~~~  257 (373)
                      .++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. ++..  . .++  |..+. ..+.+.+.   +.. +
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~-~   81 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDE-DGWTKLFDATEKAF-G   81 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCH-HHHHHHHHHHHHHH-S
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCH-HHHHHHHHHHHHHh-C
Confidence            4688999987 8999999999989999 8999999877665442 3321  1 122  22221 11222222   222 3


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus        82 ~id~li~~Ag~   92 (251)
T 1zk4_A           82 PVSTLVNNAGI   92 (251)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999873

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.94  E-value=0.0012  Score=56.04  Aligned_cols=104  Identities=19%  Similarity=0.204  Sum_probs=71.1

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHc
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~  255 (373)
                      .....+.++++||.+|+| .|..+..+++..|. .+|++++.+++..+.+++    .+...+- ....+  .....  ..
T Consensus        70 ~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~-~~~~d--~~~~~--~~  143 (215)
T 2yxe_A           70 CELLDLKPGMKVLEIGTG-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVI-VIVGD--GTLGY--EP  143 (215)
T ss_dssp             HHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEE-EEESC--GGGCC--GG
T ss_pred             HHhhCCCCCCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeE-EEECC--cccCC--CC
Confidence            445678899999999998 48889999998862 289999999988877765    3433211 11111  10000  01


Q ss_pred             CCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          256 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       256 ~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      .+.+|+|+...........+.+.|+++ |++++.-.
T Consensus       144 ~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~lv~~~~  178 (215)
T 2yxe_A          144 LAPYDRIYTTAAGPKIPEPLIRQLKDG-GKLLMPVG  178 (215)
T ss_dssp             GCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEES
T ss_pred             CCCeeEEEECCchHHHHHHHHHHcCCC-cEEEEEEC
Confidence            237999998876655667889999997 98876643

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.93  E-value=0.005  Score=55.15  Aligned_cols=77  Identities=30%  Similarity=0.370  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCC---ce-e--ecCCCCCccHHHHH---HH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGV---TD-F--VNTSEHDRPIQEVI---AE  253 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~---~~-v--i~~~~~~~~~~~~~---~~  253 (373)
                      .++++||+|+ |++|.+++..+...|+ +|+++++++++.+.+.    +.+.   .. .  .|..+.+ .+.+.+   .+
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~  102 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEAS-GQDDIINTTLA  102 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHH-HHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHH-HHHHHHHHHHH
Confidence            4688999987 8999999999999999 8999999887665432    2232   21 2  2322211 122222   22


Q ss_pred             HcCCCccEEEEccC
Q 017336          254 MTNGGVDRSVECTG  267 (373)
Q Consensus       254 ~~~~~~d~vid~~g  267 (373)
                      .. +++|++|++.|
T Consensus       103 ~~-g~iD~lvnnAG  115 (297)
T 1xhl_A          103 KF-GKIDILVNNAG  115 (297)
T ss_dssp             HH-SCCCEEEECCC
T ss_pred             hc-CCCCEEEECCC
Confidence            22 37999999987

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.92  E-value=0.0066  Score=52.98  Aligned_cols=104  Identities=16%  Similarity=0.211  Sum_probs=67.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCcee---ecCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~v---i~~~~~~--~~~~~~~~~~~~~  257 (373)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|.+..   .|..+.+  ..+.+.+.+.. |
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~-G   83 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY-S   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            5799999987 7999999999889999 899999998876544    34565432   2322221  11223333333 3


Q ss_pred             CccEEEEccCCh--------------------------HhHHHHHHHhh-cCCcEEEEEcCCC
Q 017336          258 GVDRSVECTGNI--------------------------DNMISAFECVH-DGWGVAVLVGVPS  293 (373)
Q Consensus       258 ~~d~vid~~g~~--------------------------~~~~~~~~~l~-~~~g~~v~~g~~~  293 (373)
                      +.|+++++.|..                          ...+.+++.|. .++|++|.+++..
T Consensus        84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~  146 (254)
T 4fn4_A           84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIA  146 (254)
T ss_dssp             CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechh
Confidence            799999988721                          02234455543 2349999998754

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.91  E-value=0.0042  Score=53.88  Aligned_cols=78  Identities=22%  Similarity=0.328  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCcee-ecCCCCCccHHHHHH---HHcCCCccE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDF-VNTSEHDRPIQEVIA---EMTNGGVDR  261 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~~v-i~~~~~~~~~~~~~~---~~~~~~~d~  261 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++++..+ .|..+.+ .+.+.+.   +.. +++|+
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~-g~id~   80 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVADPA-SVERGFAEALAHL-GRLDG   80 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTCHH-HHHHHHHHHHHHH-SSCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCEEEEecCCCHH-HHHHHHHHHHHHc-CCCCE
Confidence            3688999987 8999999999999999 8999999887766543 4554322 2332211 1222222   222 37999


Q ss_pred             EEEccCC
Q 017336          262 SVECTGN  268 (373)
Q Consensus       262 vid~~g~  268 (373)
                      +|++.|.
T Consensus        81 lvn~Ag~   87 (245)
T 1uls_A           81 VVHYAGI   87 (245)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999883

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.91  E-value=0.012  Score=49.54  Aligned_cols=92  Identities=12%  Similarity=0.189  Sum_probs=63.4

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          191 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       191 ~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      +|||+|+ |.+|...++.+...|. +|+++++++++.+.+. -++..+ .|..+.+  .     +.. +++|+||++.|.
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~--~-----~~~-~~~d~vi~~ag~   71 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-KDINILQKDIFDLT--L-----SDL-SDQNVVVDAYGI   71 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-SSSEEEECCGGGCC--H-----HHH-TTCSEEEECCCS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-CCCeEEeccccChh--h-----hhh-cCCCEEEECCcC
Confidence            6999997 9999999999999998 8999999988776654 344332 2333332  2     112 369999999986


Q ss_pred             h--------HhHHHHHHHhhcC-CcEEEEEcCC
Q 017336          269 I--------DNMISAFECVHDG-WGVAVLVGVP  292 (373)
Q Consensus       269 ~--------~~~~~~~~~l~~~-~g~~v~~g~~  292 (373)
                      .        ......++.++.. .++++.++..
T Consensus        72 ~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           72 SPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             STTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             CccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence            3        2334566666653 3688888764

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=96.91  E-value=0.0078  Score=52.25  Aligned_cols=79  Identities=24%  Similarity=0.323  Sum_probs=53.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCcee-e--cCCCCC--ccHHHHHHHHcCCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF-V--NTSEHD--RPIQEVIAEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~v-i--~~~~~~--~~~~~~~~~~~~~~~d  260 (373)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++++.... +  |..+.+  ..+.+.+.+.. +++|
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   82 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALT-GGID   82 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHH-SCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHC-CCCC
Confidence            4789999987 8999999999999999 899999988776654 44554332 1  222211  11222333333 3799


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      +++++.|.
T Consensus        83 ~lv~nAg~   90 (247)
T 3rwb_A           83 ILVNNASI   90 (247)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999883

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=96.90  E-value=0.0099  Score=52.33  Aligned_cols=78  Identities=17%  Similarity=0.290  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCC--c-eee--cCCCCCccHHHHHH---HHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV--T-DFV--NTSEHDRPIQEVIA---EMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~--~-~vi--~~~~~~~~~~~~~~---~~~~~  257 (373)
                      .++++||+|+ |.+|...++.+...|+ +|++++++.++.+.+ ++++.  . .++  |..+. ..+.+.+.   +.. +
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~-~   91 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKD-EDVRNLVDTTIAKH-G   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCH-HHHHHHHHHHHHHH-S
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCH-HHHHHHHHHHHHHc-C
Confidence            4688999987 8999999999988999 899998887665443 33432  1 122  22221 11222222   222 3


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus        92 ~id~li~~Ag~  102 (278)
T 2bgk_A           92 KLDIMFGNVGV  102 (278)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999998873

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=96.90  E-value=0.0066  Score=51.82  Aligned_cols=103  Identities=16%  Similarity=0.128  Sum_probs=68.4

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHc--CCcEEEEEcCChhHHHHHHh----cCCc-eeecCCCCCccHHHHHHHHcC
Q 017336          184 AKPERGSSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       184 ~~~~~~~~vlI~G~g~~G~~ai~la~~~--g~~~V~~~~~~~~~~~~~~~----lg~~-~vi~~~~~~~~~~~~~~~~~~  256 (373)
                      .+.+++.+||=+|+|. |..++.+++.+  +. +|++++.+++..+.+++    .|.. .-+.....+  ..+.+.....
T Consensus        52 ~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gd--a~~~l~~~~~  127 (221)
T 3dr5_A           52 TNGNGSTGAIAITPAA-GLVGLYILNGLADNT-TLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSR--PLDVMSRLAN  127 (221)
T ss_dssp             SCCTTCCEEEEESTTH-HHHHHHHHHHSCTTS-EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSC--HHHHGGGSCT
T ss_pred             hCCCCCCCEEEEcCCc-hHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcC--HHHHHHHhcC
Confidence            3444556999889876 88888899876  45 89999999988777754    4543 111111222  3333333324


Q ss_pred             CCccEEEEccCC---hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          257 GGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       257 ~~~d~vid~~g~---~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      +.||+||-....   ...++.+.+.|+++ |.++.-+.
T Consensus       128 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~dn~  164 (221)
T 3dr5_A          128 DSYQLVFGQVSPMDLKALVDAAWPLLRRG-GALVLADA  164 (221)
T ss_dssp             TCEEEEEECCCTTTHHHHHHHHHHHEEEE-EEEEETTT
T ss_pred             CCcCeEEEcCcHHHHHHHHHHHHHHcCCC-cEEEEeCC
Confidence            589999875443   24678899999997 98887433

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=96.90  E-value=0.0061  Score=53.84  Aligned_cols=79  Identities=24%  Similarity=0.260  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCce-ee--cCCCCC--ccHHHHHHHHcCCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-FV--NTSEHD--RPIQEVIAEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~-vi--~~~~~~--~~~~~~~~~~~~~~~d  260 (373)
                      .++++||+|+ |++|.+++..+...|+ +|++++++.++.+.+ ++++... .+  |..+.+  ..+.+.+.+.. +++|
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD  104 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKF-GRVD  104 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            5688999987 8999999999999999 899999988776554 3454322 22  322211  01222222222 3799


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      +++++.|.
T Consensus       105 ~lVnnAg~  112 (272)
T 4dyv_A          105 VLFNNAGT  112 (272)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=96.89  E-value=0.0089  Score=53.38  Aligned_cols=103  Identities=18%  Similarity=0.203  Sum_probs=64.4

Q ss_pred             CCCEEEEECC-CH--HHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceee--cCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL-GA--VGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFV--NTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~--~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi--~~~~~~--~~~~~~~~~~~~  256 (373)
                      .++++||+|+ |.  +|.++++.+...|+ +|++++++++..+.+++    .+....+  |..+.+  ..+.+.+.+.. 
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  107 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW-  107 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc-
Confidence            5789999987 55  99999999999999 79999888654444332    3422222  322211  11222232322 


Q ss_pred             CCccEEEEccCChH-----------------------------hHHHHHHHhhcCCcEEEEEcCCC
Q 017336          257 GGVDRSVECTGNID-----------------------------NMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       257 ~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +++|++|++.|...                             ....++..+..+ |+++.+++..
T Consensus       108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~Iv~isS~~  172 (293)
T 3grk_A          108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADG-GSILTLTYYG  172 (293)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTC-EEEEEEECGG
T ss_pred             CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CEEEEEeehh
Confidence            37999999987421                             233455566675 9999988643

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=96.89  E-value=0.0078  Score=51.89  Aligned_cols=77  Identities=22%  Similarity=0.273  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCceeecCCCCCccHHHHHHHHcC--CCccEEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTN--GGVDRSV  263 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~~vi~~~~~~~~~~~~~~~~~~--~~~d~vi  263 (373)
                      +++++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+. ++....++..+-.+  . +.+.+...  +++|++|
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~-~~~~~~~~~~~~id~vi   81 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGD--W-EATERALGSVGPVDLLV   81 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC--H-HHHHHHHTTCCCCCEEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCCEEEEeCCC--H-HHHHHHHHHcCCCCEEE
Confidence            4689999998 8999999999999999 8999999887766543 33222222222122  1 12333222  3699999


Q ss_pred             EccCC
Q 017336          264 ECTGN  268 (373)
Q Consensus       264 d~~g~  268 (373)
                      ++.|.
T Consensus        82 ~~Ag~   86 (244)
T 3d3w_A           82 NNAAV   86 (244)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            99873

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.87  E-value=0.0073  Score=55.22  Aligned_cols=131  Identities=15%  Similarity=0.167  Sum_probs=80.4

Q ss_pred             CEEEEECCCHHHHHHHHHHH-Hc-CCcEEEEEcCChhHHHH-HHhcCCceeecCCCCCccHHHHHHHHcCC-CccEEEEc
Q 017336          190 SSVAVFGLGAVGLAAAEGAR-IA-GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC  265 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~-~~-g~~~V~~~~~~~~~~~~-~~~lg~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~  265 (373)
                      -+|.|+|+|.+|...++.++ .. +++.+.++++++++.+. ++++|...+++  +    +.    ++... .+|+|+.|
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~--~----~~----~~l~~~~~D~V~i~   78 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT--N----YK----DMIDTENIDAIFIV   78 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES--C----HH----HHHTTSCCSEEEEC
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC--C----HH----HHhcCCCCCEEEEe
Confidence            47899999999998877776 43 66335566888877654 45678754432  1    32    22332 79999999


Q ss_pred             cCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc----hhh--cc-cceEEEEeccCCCCCCCHHHHHHHHHcCCC
Q 017336          266 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP----INV--LN-ERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  337 (373)
Q Consensus       266 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~----~~~--~~-~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l  337 (373)
                      ++...+.+.+..+|+.  |+-+++..+.   ......    ...  .+ ++.+.-..  ..+....++.+.+++.+|.+
T Consensus        79 tp~~~h~~~~~~al~~--G~~v~~eKp~---~~~~~~~~~l~~~a~~~~~~~~~~~~--~~r~~p~~~~~~~~i~~g~i  150 (346)
T 3cea_A           79 APTPFHPEMTIYAMNA--GLNVFCEKPL---GLDFNEVDEMAKVIKSHPNQIFQSGF--MRRYDDSYRYAKKIVDNGDI  150 (346)
T ss_dssp             SCGGGHHHHHHHHHHT--TCEEEECSCC---CSCHHHHHHHHHHHHTCTTSCEECCC--GGGTCHHHHHHHHHHHTTTT
T ss_pred             CChHhHHHHHHHHHHC--CCEEEEcCCC---CCCHHHHHHHHHHHHhCCCCeEEEec--ccccCHHHHHHHHHHHcCCC
Confidence            9987888899999987  4555554322   111111    111  13 44443222  22223347788888888865

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.87  E-value=0.0034  Score=56.24  Aligned_cols=104  Identities=17%  Similarity=0.189  Sum_probs=73.3

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCceeecCCCCCccHHHHHHHHc
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l----g~~~vi~~~~~~~~~~~~~~~~~  255 (373)
                      +.....++++++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++.    |...-+.....+  +    .++ 
T Consensus        64 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~----~~~-  134 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQG--W----EEF-  134 (302)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECC--G----GGC-
T ss_pred             HHHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC--H----HHc-
Confidence            45566788999999999986 8888999998887 899999999888877653    433111111111  1    112 


Q ss_pred             CCCccEEEEccCC---------------hHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          256 NGGVDRSVECTGN---------------IDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       256 ~~~~d~vid~~g~---------------~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      .+.+|+|+....-               ...+..+.+.|+|+ |++++.....
T Consensus       135 ~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~~~  186 (302)
T 3hem_A          135 DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTITI  186 (302)
T ss_dssp             CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTT-CEEEEEEEEC
T ss_pred             CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCC-cEEEEEEEec
Confidence            4589999974321               25678899999997 9998876543

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.87  E-value=0.00095  Score=56.37  Aligned_cols=102  Identities=17%  Similarity=0.146  Sum_probs=69.4

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcC
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~  256 (373)
                      .....++++++||-+|+|. |..+..+++. +. +|++++.+++..+.+++    .+...+- ....+  ..+..  ...
T Consensus        70 ~~~l~~~~~~~vLdiG~G~-G~~~~~la~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~-~~~~d--~~~~~--~~~  141 (210)
T 3lbf_A           70 TELLELTPQSRVLEIGTGS-GYQTAILAHL-VQ-HVCSVERIKGLQWQARRRLKNLDLHNVS-TRHGD--GWQGW--QAR  141 (210)
T ss_dssp             HHHTTCCTTCEEEEECCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEE-EEESC--GGGCC--GGG
T ss_pred             HHhcCCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCceE-EEECC--cccCC--ccC
Confidence            4556778999999999984 8888888887 65 89999999988887765    3443221 11111  10100  112


Q ss_pred             CCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          257 GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       257 ~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      +.||+|+....-....+.+.+.|+++ |++++.-.
T Consensus       142 ~~~D~i~~~~~~~~~~~~~~~~L~pg-G~lv~~~~  175 (210)
T 3lbf_A          142 APFDAIIVTAAPPEIPTALMTQLDEG-GILVLPVG  175 (210)
T ss_dssp             CCEEEEEESSBCSSCCTHHHHTEEEE-EEEEEEEC
T ss_pred             CCccEEEEccchhhhhHHHHHhcccC-cEEEEEEc
Confidence            47999999766555566889999997 98876533

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=96.84  E-value=0.0056  Score=53.37  Aligned_cols=76  Identities=22%  Similarity=0.106  Sum_probs=49.7

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH---hcCCceeecCCCCC-ccHHHHHHHHcCCCccEEEE
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK---KFGVTDFVNTSEHD-RPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~---~lg~~~vi~~~~~~-~~~~~~~~~~~~~~~d~vid  264 (373)
                      +++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.   +.+.+.... +..+ ..+.+.+.+.. +++|++|+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~-d~~~v~~~~~~~~~~~-g~iD~lv~   78 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPM-SEQEPAELIEAVTSAY-GQVDVLVS   78 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEEC-CCCSHHHHHHHHHHHH-SCCCEEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCcEEEE-CHHHHHHHHHHHHHHh-CCCCEEEE
Confidence            47899987 8999999999999999 8999988876655443   234432221 2222 11223333333 37999999


Q ss_pred             ccCC
Q 017336          265 CTGN  268 (373)
Q Consensus       265 ~~g~  268 (373)
                      +.|.
T Consensus        79 nAg~   82 (254)
T 1zmt_A           79 NDIF   82 (254)
T ss_dssp             ECCC
T ss_pred             CCCc
Confidence            9874

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.84  E-value=0.0044  Score=53.72  Aligned_cols=79  Identities=18%  Similarity=0.208  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      .++++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+.++.--..+..+-.+.+-.+.+.+.. +++|++|++.
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~id~lv~~A   82 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEV-ERLDVLFNVA   82 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHC-SCCSEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHh-CCCCEEEECC
Confidence            4688999987 8999999999999999 89999998877655443321112211111211222332322 3799999998


Q ss_pred             CC
Q 017336          267 GN  268 (373)
Q Consensus       267 g~  268 (373)
                      |.
T Consensus        83 g~   84 (246)
T 2ag5_A           83 GF   84 (246)
T ss_dssp             CC
T ss_pred             cc
Confidence            73

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=96.83  E-value=0.013  Score=51.11  Aligned_cols=41  Identities=22%  Similarity=0.241  Sum_probs=35.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA  229 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~  229 (373)
                      .++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~   47 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQET   47 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Confidence            4688999987 8999999999888999 899999988776554

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=96.83  E-value=0.012  Score=51.43  Aligned_cols=78  Identities=22%  Similarity=0.331  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH-HHHH-Hhc----CCce-ee--cCCCCCccHHHHHH---HH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FEEA-KKF----GVTD-FV--NTSEHDRPIQEVIA---EM  254 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~-~~~~-~~l----g~~~-vi--~~~~~~~~~~~~~~---~~  254 (373)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++ .+.+ +++    +... .+  |..+. ..+.+.+.   +.
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~   80 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKG-EAVRGLVDNAVRQ   80 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCH-HHHHHHHHHHHHh
Confidence            4688999987 8999999999999999 89999888766 4433 222    4332 22  22221 11222222   22


Q ss_pred             cCCCccEEEEccCC
Q 017336          255 TNGGVDRSVECTGN  268 (373)
Q Consensus       255 ~~~~~d~vid~~g~  268 (373)
                      . +++|++|++.|.
T Consensus        81 ~-g~iD~lv~~Ag~   93 (260)
T 1x1t_A           81 M-GRIDILVNNAGI   93 (260)
T ss_dssp             H-SCCSEEEECCCC
T ss_pred             c-CCCCEEEECCCC
Confidence            2 379999999873

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.83  E-value=0.0052  Score=53.63  Aligned_cols=102  Identities=16%  Similarity=0.099  Sum_probs=72.0

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc----eeecCCCCCccHHHHHHHHc
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT----DFVNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~----~vi~~~~~~~~~~~~~~~~~  255 (373)
                      +.....+.++.+||-+|+| .|..+..+++..++ +|++++.+++..+.+++....    .++..+-.+  +     ...
T Consensus        47 ~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~--~-----~~~  117 (266)
T 3ujc_A           47 ILSDIELNENSKVLDIGSG-LGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEANDILT--K-----EFP  117 (266)
T ss_dssp             HTTTCCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTT--C-----CCC
T ss_pred             HHHhcCCCCCCEEEEECCC-CCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECcccc--C-----CCC
Confidence            4455678899999999998 58888888887787 899999999999999875432    112111111  0     111


Q ss_pred             CCCccEEEEccCC--------hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          256 NGGVDRSVECTGN--------IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       256 ~~~~d~vid~~g~--------~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      .+.+|+|+....-        ...+..+.+.|+|+ |++++...
T Consensus       118 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  160 (266)
T 3ujc_A          118 ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPT-GTLLITDY  160 (266)
T ss_dssp             TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCC-CEEEEEEe
Confidence            2479999986321        23578889999997 99988754

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=96.82  E-value=0.0054  Score=53.66  Aligned_cols=79  Identities=25%  Similarity=0.354  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hc-----CCc-ee--ecCCCCCccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF-----GVT-DF--VNTSEHDRPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~l-----g~~-~v--i~~~~~~~~~~~~~~~~~~~  257 (373)
                      .++++||+|+ |.+|.+++..+...|+ +|+++++++++.+.+. ++     +.. ..  .|..+. ..+.+.+.+....
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~   83 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREP-GDIDRLFEKARDL   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCH-HHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCH-HHHHHHHHHHHHh
Confidence            4689999987 8999999999988999 8999999887655432 22     212 12  233221 1122233332222


Q ss_pred             -CccEEEEccCC
Q 017336          258 -GVDRSVECTGN  268 (373)
Q Consensus       258 -~~d~vid~~g~  268 (373)
                       ++|++|++.|.
T Consensus        84 ~gid~lv~~Ag~   95 (260)
T 2z1n_A           84 GGADILVYSTGG   95 (260)
T ss_dssp             TCCSEEEECCCC
T ss_pred             cCCCEEEECCCC
Confidence             49999999873

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=96.82  E-value=0.005  Score=53.64  Aligned_cols=79  Identities=18%  Similarity=0.158  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c------CCce-eecCCCCCcc-HH---HHHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F------GVTD-FVNTSEHDRP-IQ---EVIAEM  254 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-l------g~~~-vi~~~~~~~~-~~---~~~~~~  254 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ +      .+.. ..|....+.+ +.   +.+.+.
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            5789999987 8999999999989999 89999999877655432 1      1221 2233112211 22   222222


Q ss_pred             cCCCccEEEEccCC
Q 017336          255 TNGGVDRSVECTGN  268 (373)
Q Consensus       255 ~~~~~d~vid~~g~  268 (373)
                      . +++|+++++.|.
T Consensus        90 ~-g~id~lv~nAg~  102 (252)
T 3f1l_A           90 Y-PRLDGVLHNAGL  102 (252)
T ss_dssp             C-SCCSEEEECCCC
T ss_pred             C-CCCCEEEECCcc
Confidence            2 379999999874

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=96.82  E-value=0.01  Score=52.07  Aligned_cols=103  Identities=17%  Similarity=0.255  Sum_probs=63.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-Hhc-----CCce-ee--cCCCCCccHHHHHH---HH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF-----GVTD-FV--NTSEHDRPIQEVIA---EM  254 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~l-----g~~~-vi--~~~~~~~~~~~~~~---~~  254 (373)
                      .++++||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+ +++     +... .+  |..+. ..+.+.+.   +.
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~   83 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQ-QQLRDTFRKVVDH   83 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCH-HHHHHHHHHHHHH
Confidence            4688999987 8999999999999999 899998987765433 222     1111 12  32221 11222222   22


Q ss_pred             cCCCccEEEEccCCh--H---------------hHHHHHHHhhcC----CcEEEEEcCCC
Q 017336          255 TNGGVDRSVECTGNI--D---------------NMISAFECVHDG----WGVAVLVGVPS  293 (373)
Q Consensus       255 ~~~~~d~vid~~g~~--~---------------~~~~~~~~l~~~----~g~~v~~g~~~  293 (373)
                      . +++|++|++.|..  +               ....+++.+...    .|+++.+++..
T Consensus        84 ~-g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  142 (267)
T 2gdz_A           84 F-GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLA  142 (267)
T ss_dssp             H-SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred             c-CCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCcc
Confidence            2 3799999998742  1               122344555431    28899887643

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=96.82  E-value=0.0098  Score=51.78  Aligned_cols=77  Identities=29%  Similarity=0.376  Sum_probs=48.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH--HHHHHhcCCce-ee--cCCCCCccHHHHHH---HHcCCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEEAKKFGVTD-FV--NTSEHDRPIQEVIA---EMTNGG  258 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~--~~~~~~lg~~~-vi--~~~~~~~~~~~~~~---~~~~~~  258 (373)
                      .++++||+|+ |.+|.+.++.+...|+ +|+++++++++  .+.+++.+... .+  |..+. ..+.+.+.   +.. ++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~-g~   79 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDPAPALAEIARHGVKAVHHPADLSDV-AQIEALFALAEREF-GG   79 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSH-HHHHHHHHHHHHHH-SS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCH-HHHHHHHHHHHHHc-CC
Confidence            3688999987 8999999999999999 89988887651  22333334332 22  22221 11222222   222 37


Q ss_pred             ccEEEEccC
Q 017336          259 VDRSVECTG  267 (373)
Q Consensus       259 ~d~vid~~g  267 (373)
                      +|++|++.|
T Consensus        80 id~lv~~Ag   88 (255)
T 2q2v_A           80 VDILVNNAG   88 (255)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=96.81  E-value=0.0036  Score=53.94  Aligned_cols=77  Identities=18%  Similarity=0.289  Sum_probs=51.4

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCce-e--ecCCCCCccHH---HHHHHHcCCCcc
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-F--VNTSEHDRPIQ---EVIAEMTNGGVD  260 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~-v--i~~~~~~~~~~---~~~~~~~~~~~d  260 (373)
                      ++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+ ++... .  .|..+.+ .+.   +.+.+.. +++|
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~-g~id   79 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHE-DVDVAFAAAVEWG-GLPE   79 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHH-HHHHHHHHHHHHH-CSCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCceEEECCCCCHH-HHHHHHHHHHHhc-CCCc
Confidence            578999987 8999999998889999 89999999887665543 33221 1  2322211 122   2222222 3799


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      +++++.|.
T Consensus        80 ~lvnnAg~   87 (235)
T 3l6e_A           80 LVLHCAGT   87 (235)
T ss_dssp             EEEEECCC
T ss_pred             EEEECCCC
Confidence            99999874

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=96.81  E-value=0.0043  Score=53.84  Aligned_cols=81  Identities=14%  Similarity=0.112  Sum_probs=53.3

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCce-eecCCCCCccHHHHHHHHcCCCccEE
Q 017336          186 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRS  262 (373)
Q Consensus       186 ~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~~-vi~~~~~~~~~~~~~~~~~~~~~d~v  262 (373)
                      ..++++|||+|+ |++|.+.+..+...|+ +|++++++.++.+.+. ++.... ++..+-.+.+-.+.+.+.. +++|++
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~id~l   88 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT-SNLDIL   88 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC-SCCSEE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc-CCCCEE
Confidence            457899999987 8999999999989999 8999999988776654 344322 2212212211222222222 379999


Q ss_pred             EEccCC
Q 017336          263 VECTGN  268 (373)
Q Consensus       263 id~~g~  268 (373)
                      |++.|.
T Consensus        89 i~~Ag~   94 (249)
T 3f9i_A           89 VCNAGI   94 (249)
T ss_dssp             EECCC-
T ss_pred             EECCCC
Confidence            999883

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.81  E-value=0.0056  Score=52.82  Aligned_cols=75  Identities=19%  Similarity=0.266  Sum_probs=51.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHcC--CCccEEEE
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVDRSVE  264 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~--~~~d~vid  264 (373)
                      ++++||+|+ |.+|.+.++.+...|+ +|+++++++++  ..+++++..+ .|..+.  ++.+.+.+...  +++|++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~g~id~lv~   76 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSLGAVPLPTDLEKD--DPKGLVKRALEALGGLHVLVH   76 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHHTCEEEECCTTTS--CHHHHHHHHHHHHTSCCEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhhCcEEEecCCchH--HHHHHHHHHHHHcCCCCEEEE
Confidence            578999987 8999999999999999 89999888766  3344554322 333332  23333332211  37999999


Q ss_pred             ccCC
Q 017336          265 CTGN  268 (373)
Q Consensus       265 ~~g~  268 (373)
                      +.|.
T Consensus        77 ~Ag~   80 (239)
T 2ekp_A           77 AAAV   80 (239)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9873

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.81  E-value=0.0051  Score=53.55  Aligned_cols=79  Identities=18%  Similarity=0.233  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----c--C-Cc-ee--ecCCCCC--ccHHHHHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F--G-VT-DF--VNTSEHD--RPIQEVIAEM  254 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----l--g-~~-~v--i~~~~~~--~~~~~~~~~~  254 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+    .  + .. .+  .|..+.+  ..+.+.+.+.
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            4689999987 8999999999888999 89999999877655432    1  2 11 12  2322211  0122222222


Q ss_pred             cCCCccEEEEccCC
Q 017336          255 TNGGVDRSVECTGN  268 (373)
Q Consensus       255 ~~~~~d~vid~~g~  268 (373)
                      . +++|+++++.|.
T Consensus        85 ~-g~iD~lvnnAg~   97 (250)
T 3nyw_A           85 Y-GAVDILVNAAAM   97 (250)
T ss_dssp             H-CCEEEEEECCCC
T ss_pred             c-CCCCEEEECCCc
Confidence            2 379999999884

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.81  E-value=0.0021  Score=56.59  Aligned_cols=78  Identities=17%  Similarity=0.190  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHH---HHHHcCCCccEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEV---IAEMTNGGVDRS  262 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~---~~~~~~~~~d~v  262 (373)
                      .++++||+|+ |++|.+++..+...|+ +|++++++.++.+.+..-....+ .|..+.+ .+.+.   +.+.. +++|++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~-g~iD~l   91 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVERLKALNLPNTLCAQVDVTDKY-TFDTAITRAEKIY-GPADAI   91 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHTTCCTTEEEEECCTTCHH-HHHHHHHHHHHHH-CSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHhhcCCceEEEecCCCHH-HHHHHHHHHHHHC-CCCCEE
Confidence            4689999987 8999999999999999 79999898777654432222111 2322211 12222   22222 379999


Q ss_pred             EEccCC
Q 017336          263 VECTGN  268 (373)
Q Consensus       263 id~~g~  268 (373)
                      |++.|.
T Consensus        92 vnnAg~   97 (266)
T 3p19_A           92 VNNAGM   97 (266)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999884

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.80  E-value=0.0056  Score=53.61  Aligned_cols=77  Identities=19%  Similarity=0.239  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcC--Ccee-ecCCCCCccHHHHHH---HHcCCCc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFG--VTDF-VNTSEHDRPIQEVIA---EMTNGGV  259 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg--~~~v-i~~~~~~~~~~~~~~---~~~~~~~  259 (373)
                      .++++||+|+ |.+|.+.+..+...|+ +|+++++++++.+.+. ++.  +..+ .|..+.+ .+.+.+.   +.. +++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~-~v~~~~~~~~~~~-g~i   87 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRA-SVDAAMQKAIDAL-GGF   87 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHH-HHHHHHHHHHHHH-TCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHH-HHHHHHHHHHHHc-CCC
Confidence            4689999987 8999999999999999 8999999887766543 332  2211 2322211 1222222   222 379


Q ss_pred             cEEEEccC
Q 017336          260 DRSVECTG  267 (373)
Q Consensus       260 d~vid~~g  267 (373)
                      |++|++.|
T Consensus        88 D~lv~~Ag   95 (263)
T 3ak4_A           88 DLLCANAG   95 (263)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.80  E-value=0.0026  Score=54.44  Aligned_cols=104  Identities=14%  Similarity=0.148  Sum_probs=69.8

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcC--
Q 017336          184 AKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN--  256 (373)
Q Consensus       184 ~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~--  256 (373)
                      ....++++||-+|+| .|..++.+++.++ ..+|++++.+++..+.+++    .|...-+.....+  ..+.+..+..  
T Consensus        65 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d--~~~~~~~~~~~~  141 (229)
T 2avd_A           65 ARLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKP--ALETLDELLAAG  141 (229)
T ss_dssp             HHHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESC--HHHHHHHHHHTT
T ss_pred             HHhcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcC--HHHHHHHHHhcC
Confidence            345678899999988 6888889998763 3399999999988877765    3442111111122  4344433322  


Q ss_pred             --CCccEEEEccCC---hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          257 --GGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       257 --~~~d~vid~~g~---~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                        +.+|+|+.....   ...+..+.+.|+++ |.++....
T Consensus       142 ~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  180 (229)
T 2avd_A          142 EAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLRV  180 (229)
T ss_dssp             CTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             CCCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEECC
Confidence              479998865443   25688999999997 99887653

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.80  E-value=0.0023  Score=56.20  Aligned_cols=78  Identities=19%  Similarity=0.227  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH-HHHHHhcCCcee-ecCCCCCccHH---HHHHHHcCCCccE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTDF-VNTSEHDRPIQ---EVIAEMTNGGVDR  261 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~-~~~~~~lg~~~v-i~~~~~~~~~~---~~~~~~~~~~~d~  261 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++ .+.+++.++..+ .|..+.+ .+.   +.+.+.. +++|+
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~-g~iD~  102 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGH-RVIISYRTEHASVTELRQAGAVALYGDFSCET-GIMAFIDLLKTQT-SSLRA  102 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESSCCHHHHHHHHHTCEEEECCTTSHH-HHHHHHHHHHHHC-SCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhcCCeEEECCCCCHH-HHHHHHHHHHHhc-CCCCE
Confidence            4678999987 8999999999988999 78888887655 444555665432 2332211 122   2222222 37999


Q ss_pred             EEEccCC
Q 017336          262 SVECTGN  268 (373)
Q Consensus       262 vid~~g~  268 (373)
                      ++++.|.
T Consensus       103 lv~nAg~  109 (260)
T 3gem_A          103 VVHNASE  109 (260)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999883

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=96.79  E-value=0.0056  Score=55.20  Aligned_cols=91  Identities=15%  Similarity=0.066  Sum_probs=63.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHH--cCCcEEEEEcCChhH--HHHHHhcCCceeecCCCCCccHHHHHHHHcCC-CccEEEE
Q 017336          190 SSVAVFGLGAVGLAAAEGARI--AGASRIIGVDRSSKR--FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE  264 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~--~g~~~V~~~~~~~~~--~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid  264 (373)
                      -+|.|+|+|.+|...+..+..  -+.+.+.++++++++  ++.++++|.....    .   ..+.+.+.+.+ ++|+||+
T Consensus         5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~----~---~~e~ll~~~~~~~iDvV~~   77 (312)
T 1nvm_B            5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY----A---GVEGLIKLPEFADIDFVFD   77 (312)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES----S---HHHHHHHSGGGGGEEEEEE
T ss_pred             CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCccc----C---CHHHHHhccCCCCCcEEEE
Confidence            478999999999988888743  466455666777555  5677788875221    1   22334333323 7999999


Q ss_pred             ccCChHhHHHHHHHhhc--CCcEEEE
Q 017336          265 CTGNIDNMISAFECVHD--GWGVAVL  288 (373)
Q Consensus       265 ~~g~~~~~~~~~~~l~~--~~g~~v~  288 (373)
                      +++...+.+.+..++..  + .+++.
T Consensus        78 atp~~~h~~~a~~al~a~~G-k~Vi~  102 (312)
T 1nvm_B           78 ATSASAHVQNEALLRQAKPG-IRLID  102 (312)
T ss_dssp             CSCHHHHHHHHHHHHHHCTT-CEEEE
T ss_pred             CCChHHHHHHHHHHHHhCCC-CEEEE
Confidence            99987778888899987  6 66655

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.79  E-value=0.0042  Score=55.14  Aligned_cols=102  Identities=16%  Similarity=0.146  Sum_probs=70.3

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCceeecCCCCCccHHHHHHHHc
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l----g~~~vi~~~~~~~~~~~~~~~~~  255 (373)
                      +.+...+.++.+||-+|+|. |..+..+++..|. +|++++.+++..+.+++.    |...-+.....+  +    .+..
T Consensus        56 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d--~----~~~~  127 (287)
T 1kpg_A           56 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAG--W----EQFD  127 (287)
T ss_dssp             HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESC--G----GGCC
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECC--h----hhCC
Confidence            34556788999999999876 7788888888898 999999999888877653    322111111111  1    1122


Q ss_pred             CCCccEEEEc-----cC---ChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          256 NGGVDRSVEC-----TG---NIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       256 ~~~~d~vid~-----~g---~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                       +.+|+|+..     .+   -...+..+.+.|+|+ |++++...
T Consensus       128 -~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  169 (287)
T 1kpg_A          128 -EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHTI  169 (287)
T ss_dssp             -CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred             -CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCC-CEEEEEEe
Confidence             579999875     22   135688899999997 99987654

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.78  E-value=0.0068  Score=52.79  Aligned_cols=88  Identities=22%  Similarity=0.248  Sum_probs=56.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh-------------------hHHHHH----HhcCCce-eecCC-CC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KRFEEA----KKFGVTD-FVNTS-EH  243 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~-------------------~~~~~~----~~lg~~~-vi~~~-~~  243 (373)
                      +++|+|+|+|++|..+++.+...|..+++.++.+.                   .|.+.+    ++++... +.... ..
T Consensus        31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  110 (249)
T 1jw9_B           31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL  110 (249)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            47899999999999999999999998999998876                   555444    2333221 21111 11


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhh
Q 017336          244 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH  280 (373)
Q Consensus       244 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~  280 (373)
                      +  - +.+.+... ++|+||+|+++.+.-....+...
T Consensus       111 ~--~-~~~~~~~~-~~DvVi~~~d~~~~~~~l~~~~~  143 (249)
T 1jw9_B          111 D--D-AELAALIA-EHDLVLDCTDNVAVRNQLNAGCF  143 (249)
T ss_dssp             C--H-HHHHHHHH-TSSEEEECCSSHHHHHHHHHHHH
T ss_pred             C--H-hHHHHHHh-CCCEEEEeCCCHHHHHHHHHHHH
Confidence            1  1 12333322 69999999988654333333333

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.78  E-value=0.00043  Score=58.34  Aligned_cols=133  Identities=17%  Similarity=0.218  Sum_probs=76.1

Q ss_pred             ceeeEEE-EecCceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEc
Q 017336          142 TFSEYTV-VHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD  220 (373)
Q Consensus       142 ~~a~~~~-v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~  220 (373)
                      .|.+|.. .+....+.+++.+++.........  .....+.  ..+.++++||-+|+|. |..+..+++ .+..+|++++
T Consensus        17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~--~~~~~l~--~~~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~v~~vD   90 (205)
T 3grz_A           17 EWEDYQPVFKDQEIIRLDPGLAFGTGNHQTTQ--LAMLGIE--RAMVKPLTVADVGTGS-GILAIAAHK-LGAKSVLATD   90 (205)
T ss_dssp             TTCCCCCSSTTCEEEEESCC-----CCHHHHH--HHHHHHH--HHCSSCCEEEEETCTT-SHHHHHHHH-TTCSEEEEEE
T ss_pred             cccccccCCCCceeEEecCCcccCCCCCccHH--HHHHHHH--HhccCCCEEEEECCCC-CHHHHHHHH-CCCCEEEEEE
Confidence            5666655 566677777777655443211100  0011111  1256889999999876 677777776 4555999999


Q ss_pred             CChhHHHHHHh----cCCce--eecCCCCCccHHHHHHHHcCCCccEEEEccCCh---HhHHHHHHHhhcCCcEEEEEc
Q 017336          221 RSSKRFEEAKK----FGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       221 ~~~~~~~~~~~----lg~~~--vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      .+++..+.+++    .+...  ++..+-.         +...+.+|+|+......   ..+..+.+.|+++ |++++..
T Consensus        91 ~s~~~~~~a~~~~~~~~~~~v~~~~~d~~---------~~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~  159 (205)
T 3grz_A           91 ISDESMTAAEENAALNGIYDIALQKTSLL---------ADVDGKFDLIVANILAEILLDLIPQLDSHLNED-GQVIFSG  159 (205)
T ss_dssp             SCHHHHHHHHHHHHHTTCCCCEEEESSTT---------TTCCSCEEEEEEESCHHHHHHHGGGSGGGEEEE-EEEEEEE
T ss_pred             CCHHHHHHHHHHHHHcCCCceEEEecccc---------ccCCCCceEEEECCcHHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence            99988877765    34332  2211111         11234799999765432   2355666788886 8888753

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.78  E-value=0.0087  Score=53.30  Aligned_cols=79  Identities=19%  Similarity=0.203  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCce-eecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~-vi~~~~~~~~~~~~~~~~~~~~~d~vid  264 (373)
                      .++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+.+ ++... .+..+-.+.+-.+.+.+.. +++|++|+
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~-~~iD~lv~   92 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV-SGADVLIN   92 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC-CCEEEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc-CCCCEEEE
Confidence            5789999987 8999999999999999 89999999887766543 44322 2212211211222222222 47999999


Q ss_pred             ccCC
Q 017336          265 CTGN  268 (373)
Q Consensus       265 ~~g~  268 (373)
                      +.|.
T Consensus        93 nAg~   96 (291)
T 3rd5_A           93 NAGI   96 (291)
T ss_dssp             CCCC
T ss_pred             CCcC
Confidence            9883

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=96.77  E-value=0.013  Score=52.16  Aligned_cols=78  Identities=21%  Similarity=0.235  Sum_probs=49.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH-HHH----HHhcCCcee-e--cCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FEE----AKKFGVTDF-V--NTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~-~~~----~~~lg~~~v-i--~~~~~~--~~~~~~~~~~~~  256 (373)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++ .+.    +++.+.... +  |..+.+  ..+.+.+.+.. 
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  123 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL-  123 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            5789999987 8999999999999999 78888877543 222    233454332 2  322211  01222222222 


Q ss_pred             CCccEEEEccC
Q 017336          257 GGVDRSVECTG  267 (373)
Q Consensus       257 ~~~d~vid~~g  267 (373)
                      +++|++|++.|
T Consensus       124 g~iD~lvnnAg  134 (291)
T 3ijr_A          124 GSLNILVNNVA  134 (291)
T ss_dssp             SSCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999876

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.77  E-value=0.0018  Score=56.43  Aligned_cols=103  Identities=13%  Similarity=0.112  Sum_probs=69.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcC-CC
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN-GG  258 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~-~~  258 (373)
                      ...++++||-+|+|. |..++.+++.++ ..+|++++.+++..+.+++    .|...-+.....+  ..+.+..... +.
T Consensus        60 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d--~~~~l~~~~~~~~  136 (248)
T 3tfw_A           60 RLTQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGP--ALQSLESLGECPA  136 (248)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESC--HHHHHHTCCSCCC
T ss_pred             hhcCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHhcCCCCC
Confidence            455788999999875 788888888874 3499999999988887765    3543211111222  4343443332 27


Q ss_pred             ccEEEEccCC---hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          259 VDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       259 ~d~vid~~g~---~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ||+|+-....   +..++.+.+.|+++ |.++.-..
T Consensus       137 fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~~~~  171 (248)
T 3tfw_A          137 FDLIFIDADKPNNPHYLRWALRYSRPG-TLIIGDNV  171 (248)
T ss_dssp             CSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEECC
T ss_pred             eEEEEECCchHHHHHHHHHHHHhcCCC-eEEEEeCC
Confidence            9999943332   25688889999997 98887654

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.77  E-value=0.0056  Score=54.86  Aligned_cols=73  Identities=15%  Similarity=0.118  Sum_probs=53.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHH-HHhcCCc--eeecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~-~~~lg~~--~vi~~~~~~~~~~~~~~~~~~~~~d~vid  264 (373)
                      .+++++|+|+|++|.+++..+...|+.+|++++++.++.+. +++++..  .+++       + +.+.+.. ..+|+||+
T Consensus       140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~-------~-~~~~~~~-~~aDivIn  210 (297)
T 2egg_A          140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS-------L-AEAETRL-AEYDIIIN  210 (297)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC-------H-HHHHHTG-GGCSEEEE
T ss_pred             CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee-------H-HHHHhhh-ccCCEEEE
Confidence            57899999999999999999999998789999999887654 4556552  1221       2 2233322 26999999


Q ss_pred             ccCCh
Q 017336          265 CTGNI  269 (373)
Q Consensus       265 ~~g~~  269 (373)
                      |++..
T Consensus       211 ~t~~~  215 (297)
T 2egg_A          211 TTSVG  215 (297)
T ss_dssp             CSCTT
T ss_pred             CCCCC
Confidence            99864

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.76  E-value=0.0068  Score=52.79  Aligned_cols=78  Identities=15%  Similarity=0.219  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-e--ecCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-v--i~~~~~~--~~~~~~~~~~~~~  257 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.    +.+... .  .|..+.+  ..+.+.+.+.  +
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--g   82 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH--A   82 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH--S
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh--C
Confidence            4689999987 8999999999999999 8999999887655443    334432 2  2322211  1123333333  5


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus        83 ~id~lv~nAg~   93 (252)
T 3h7a_A           83 PLEVTIFNVGA   93 (252)
T ss_dssp             CEEEEEECCCC
T ss_pred             CceEEEECCCc
Confidence            89999999884

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=96.76  E-value=0.0098  Score=52.73  Aligned_cols=79  Identities=16%  Similarity=0.194  Sum_probs=50.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c---CCc--ee--ecCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F---GVT--DF--VNTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-l---g~~--~v--i~~~~~~--~~~~~~~~~~~~  256 (373)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.+ +   +..  ..  .|..+.+  ..+.+.+.+.. 
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  109 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF-  109 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            5789999987 8999999999999999 89999999877654432 2   221  22  2332221  11222233332 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|++.|.
T Consensus       110 g~iD~lvnnAG~  121 (281)
T 4dry_A          110 ARLDLLVNNAGS  121 (281)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999874

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=96.75  E-value=0.0089  Score=53.45  Aligned_cols=79  Identities=20%  Similarity=0.241  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCceee--cCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFV--NTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g--~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~vi--~~~~~~--~~~~~~~~~~~~  256 (373)
                      .++++||+|+ |  ++|.++++.+...|+ +|++++++++..+.++    +.+....+  |..+.+  ..+.+.+.+.. 
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  106 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEW-  106 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            5789999987 5  999999998889999 7999988875544443    33432332  322211  11222222222 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|++.|.
T Consensus       107 g~iD~lVnnAG~  118 (296)
T 3k31_A          107 GSLDFVVHAVAF  118 (296)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999874

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.74  E-value=0.0077  Score=57.52  Aligned_cols=92  Identities=21%  Similarity=0.204  Sum_probs=70.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      -.+++|+|+|.|.+|..+++.++.+|+ +|++++++..+...+...|... .     +  +    .+... ..|+|+.++
T Consensus       275 L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~~~~~~a~~~G~~~-~-----~--l----~ell~-~aDiVi~~~  340 (494)
T 3d64_A          275 IAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDPICALQAAMEGYRV-V-----T--M----EYAAD-KADIFVTAT  340 (494)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCHHHHHHHHTTTCEE-C-----C--H----HHHTT-TCSEEEECS
T ss_pred             cCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCChHhHHHHHHcCCEe-C-----C--H----HHHHh-cCCEEEECC
Confidence            478999999999999999999999999 8999999887754444556532 1     1  2    22222 589999998


Q ss_pred             CChHhH-HHHHHHhhcCCcEEEEEcCCC
Q 017336          267 GNIDNM-ISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       267 g~~~~~-~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +....+ ...++.|+++ ..++.+|...
T Consensus       341 ~t~~lI~~~~l~~MK~g-AilINvgrg~  367 (494)
T 3d64_A          341 GNYHVINHDHMKAMRHN-AIVCNIGHFD  367 (494)
T ss_dssp             SSSCSBCHHHHHHCCTT-EEEEECSSSS
T ss_pred             CcccccCHHHHhhCCCC-cEEEEcCCCc
Confidence            765544 4778899997 8888888754

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.73  E-value=0.0069  Score=53.47  Aligned_cols=78  Identities=21%  Similarity=0.280  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hc---C---Cce-e--ecCCCCCccHHHHHH---H
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF---G---VTD-F--VNTSEHDRPIQEVIA---E  253 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~l---g---~~~-v--i~~~~~~~~~~~~~~---~  253 (373)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+. ++   .   ... .  .|..+.+ .+.+.+.   +
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~   82 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDA-GQDEILSTTLG   82 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHH-HHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHH-HHHHHHHHHHH
Confidence            4688999987 8999999998888999 8999999887765442 22   2   111 1  2322211 1222222   2


Q ss_pred             HcCCCccEEEEccCC
Q 017336          254 MTNGGVDRSVECTGN  268 (373)
Q Consensus       254 ~~~~~~d~vid~~g~  268 (373)
                      .. +++|++|++.|.
T Consensus        83 ~~-g~id~lv~~Ag~   96 (278)
T 1spx_A           83 KF-GKLDILVNNAGA   96 (278)
T ss_dssp             HH-SCCCEEEECCC-
T ss_pred             Hc-CCCCEEEECCCC
Confidence            22 379999999874

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.72  E-value=0.0051  Score=54.46  Aligned_cols=79  Identities=22%  Similarity=0.297  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-ee--cCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FV--NTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-vi--~~~~~~--~~~~~~~~~~~~~  257 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.+... .+  |..+.+  ..+.+.+.+.. +
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-g  108 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL-G  108 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            4689999987 8999999999999999 8999989877655432    334322 22  322211  11222222222 3


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus       109 ~iD~lvnnAg~  119 (276)
T 3r1i_A          109 GIDIAVCNAGI  119 (276)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=96.72  E-value=0.0097  Score=51.13  Aligned_cols=101  Identities=17%  Similarity=0.194  Sum_probs=68.8

Q ss_pred             hccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHhcC-----CceeecCCCCCccHHHHHHHHc
Q 017336          182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFG-----VTDFVNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~lg-----~~~vi~~~~~~~~~~~~~~~~~  255 (373)
                      +...++||++||=+|+|. |..+..+|+..|. .+|++++.+++..+.+++.-     ...+.. +..+..   .. ...
T Consensus        71 ~~l~ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~-d~~~p~---~~-~~~  144 (233)
T 4df3_A           71 IELPVKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILG-DARFPE---KY-RHL  144 (233)
T ss_dssp             SCCCCCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEES-CTTCGG---GG-TTT
T ss_pred             hhcCCCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEE-eccCcc---cc-ccc
Confidence            457899999999999876 7888889988764 38999999999888776532     222321 111100   00 111


Q ss_pred             CCCccEEEEccCCh----HhHHHHHHHhhcCCcEEEEE
Q 017336          256 NGGVDRSVECTGNI----DNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       256 ~~~~d~vid~~g~~----~~~~~~~~~l~~~~g~~v~~  289 (373)
                      .+.+|+||.....+    ..+..+.+.|+|+ |++++.
T Consensus       145 ~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpG-G~lvI~  181 (233)
T 4df3_A          145 VEGVDGLYADVAQPEQAAIVVRNARFFLRDG-GYMLMA  181 (233)
T ss_dssp             CCCEEEEEECCCCTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cceEEEEEEeccCChhHHHHHHHHHHhccCC-CEEEEE
Confidence            23689988765544    2566788899997 998764

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.72  E-value=0.006  Score=53.60  Aligned_cols=86  Identities=15%  Similarity=0.153  Sum_probs=60.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      +++++|+|+|++|.+++..+...|. +|+++.|+.+|.+.+.++++. +...++.             ..+|+||+|++.
T Consensus       118 ~k~vlvlGaGGaaraia~~L~~~G~-~v~V~nRt~~ka~~la~~~~~-~~~~~~l-------------~~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGAGGSAKALACELKKQGL-QVSVLNRSSRGLDFFQRLGCD-CFMEPPK-------------SAFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCTTHHHHHHHTCE-EESSCCS-------------SCCSEEEECCTT
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCe-EecHHHh-------------ccCCEEEEcccC
Confidence            8999999999999999999999995 999999998887666577753 3332221             168999999764


Q ss_pred             hH-----hHHH-HHHHhhcCCcEEEEEc
Q 017336          269 ID-----NMIS-AFECVHDGWGVAVLVG  290 (373)
Q Consensus       269 ~~-----~~~~-~~~~l~~~~g~~v~~g  290 (373)
                      ..     .-.. ....++++ ..++.+.
T Consensus       183 Gm~~~~~l~~~~l~~~l~~~-~~v~D~v  209 (269)
T 3phh_A          183 SLHNELPLNKEVLKGYFKEG-KLAYDLA  209 (269)
T ss_dssp             CCCCSCSSCHHHHHHHHHHC-SEEEESC
T ss_pred             CCCCCCCCChHHHHhhCCCC-CEEEEeC
Confidence            21     1112 22257775 6665553

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.70  E-value=0.011  Score=52.06  Aligned_cols=80  Identities=21%  Similarity=0.326  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~--~~~~~~~~~~~~~  257 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+    ++.+... .  .|..+.+  ..+.+.+.+...+
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   98 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   98 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999987 8999999999999999 899999988765543    2234332 1  2322211  0122233333335


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus        99 ~id~lv~nAg~  109 (273)
T 1ae1_A           99 KLNILVNNAGV  109 (273)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            79999999874

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=96.68  E-value=0.011  Score=51.21  Aligned_cols=78  Identities=23%  Similarity=0.342  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHHHHH----HhcCCce-ee--cCCCCCccHHHHHH---HHc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIA---EMT  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~-~~~~~~~~----~~lg~~~-vi--~~~~~~~~~~~~~~---~~~  255 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++ ++++.+.+    ++.+... .+  |..+.+ .+.+.+.   +..
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~   80 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAE-DVTNMVKQTVDVF   80 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            3688999987 8999999999999999 7888877 66655433    2334332 22  322211 1222222   222


Q ss_pred             CCCccEEEEccCC
Q 017336          256 NGGVDRSVECTGN  268 (373)
Q Consensus       256 ~~~~d~vid~~g~  268 (373)
                       +++|++|++.|.
T Consensus        81 -g~id~lv~nAg~   92 (246)
T 2uvd_A           81 -GQVDILVNNAGV   92 (246)
T ss_dssp             -SCCCEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             379999999873

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.68  E-value=0.0059  Score=54.76  Aligned_cols=78  Identities=26%  Similarity=0.325  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-e--ecCCCCCccHHHHHH---HHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIA---EMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-v--i~~~~~~~~~~~~~~---~~~~  256 (373)
                      .++++||+|+ |++|.+.+..+...|+ +|++++++.++.+.+.    +.+... +  .|..+.+ .+.+.+.   +.. 
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~-  106 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLD-EMVRLADEAFRLL-  106 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHHhC-
Confidence            5789999987 8999999999999999 8999999987765543    234332 2  2332211 1222222   222 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|++.|.
T Consensus       107 g~id~lvnnAg~  118 (301)
T 3tjr_A          107 GGVDVVFSNAGI  118 (301)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999883

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.68  E-value=0.0081  Score=52.40  Aligned_cols=77  Identities=25%  Similarity=0.236  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee--cCCCCCccHHHHHH---HHcCCCccE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV--NTSEHDRPIQEVIA---EMTNGGVDR  261 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi--~~~~~~~~~~~~~~---~~~~~~~d~  261 (373)
                      .++++||+|+ |.+|.+.++.+...|+ +|+++++++++.+..++++. ..+  |..+. ..+.+.+.   +.. +++|+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~-~~~~~~~~~~~~~~-g~iD~   80 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGG-AFFQVDLEDE-RERVRFVEEAAYAL-GRVDV   80 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTC-EEEECCTTCH-HHHHHHHHHHHHHH-SCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhhC-CEEEeeCCCH-HHHHHHHHHHHHHc-CCCCE
Confidence            4688999987 8999999999999999 89999888776444455532 332  32221 11222222   222 37999


Q ss_pred             EEEccCC
Q 017336          262 SVECTGN  268 (373)
Q Consensus       262 vid~~g~  268 (373)
                      +|++.|.
T Consensus        81 lv~~Ag~   87 (256)
T 2d1y_A           81 LVNNAAI   87 (256)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999873

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.68  E-value=0.019  Score=51.48  Aligned_cols=73  Identities=25%  Similarity=0.282  Sum_probs=54.5

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-eecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~-vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      .+|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|... .-+..+.           . ...|+||.|+..
T Consensus         8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~-----------~-~~aDvvi~~vp~   74 (303)
T 3g0o_A            8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACGAAASAREF-----------A-GVVDALVILVVN   74 (303)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEESSSTTT-----------T-TTCSEEEECCSS
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCccccCCHHHH-----------H-hcCCEEEEECCC
Confidence            579999999999999998888998 8999999999999998888754 2222111           0 146888888776


Q ss_pred             hHhHHHH
Q 017336          269 IDNMISA  275 (373)
Q Consensus       269 ~~~~~~~  275 (373)
                      +......
T Consensus        75 ~~~~~~v   81 (303)
T 3g0o_A           75 AAQVRQV   81 (303)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            5444444

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.68  E-value=0.0045  Score=54.11  Aligned_cols=78  Identities=24%  Similarity=0.312  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-e--ecCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~-v--i~~~~~~--~~~~~~~~~~~~~  257 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+    .+... .  .|..+.+  ..+.+.+.+.. +
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   82 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF-G   82 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            4689999987 8999999999999999 89999999887665543    23322 1  2322211  01222232322 3


Q ss_pred             CccEEEEccC
Q 017336          258 GVDRSVECTG  267 (373)
Q Consensus       258 ~~d~vid~~g  267 (373)
                      ++|+++++.|
T Consensus        83 ~id~lv~nAg   92 (257)
T 3imf_A           83 RIDILINNAA   92 (257)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999988

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=96.68  E-value=0.014  Score=50.17  Aligned_cols=75  Identities=21%  Similarity=0.308  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c-CCceeecCCCCCccHHHHHHHHcC--CCccEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F-GVTDFVNTSEHDRPIQEVIAEMTN--GGVDRS  262 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-l-g~~~vi~~~~~~~~~~~~~~~~~~--~~~d~v  262 (373)
                      .++++||+|+ |.+|...++.+...|+ +|++++++.++.+.+.+ + +.. ++..+-.+  . +.+.+...  +++|++
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~D~~~--~-~~~~~~~~~~~~id~v   80 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIE-PVCVDLGD--W-DATEKALGGIGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCE-EEECCTTC--H-HHHHHHHTTCCCCSEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCC-cEEecCCC--H-HHHHHHHHHcCCCCEE
Confidence            4688999987 8999999999999999 89999998877655433 3 332 22222112  1 22333322  268999


Q ss_pred             EEccC
Q 017336          263 VECTG  267 (373)
Q Consensus       263 id~~g  267 (373)
                      |++.|
T Consensus        81 i~~Ag   85 (244)
T 1cyd_A           81 VNNAA   85 (244)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99988

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.67  E-value=0.0099  Score=54.90  Aligned_cols=93  Identities=17%  Similarity=0.160  Sum_probs=66.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      -+|+|+|+|.+|..+++.+.. .. .|.+++++.++.+.+++......+|..+.     +.+.++.. +.|+|++|++..
T Consensus        17 mkilvlGaG~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~~~~~~~~d~~d~-----~~l~~~~~-~~DvVi~~~p~~   88 (365)
T 3abi_A           17 MKVLILGAGNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKEFATPLKVDASNF-----DKLVEVMK-EFELVIGALPGF   88 (365)
T ss_dssp             CEEEEECCSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTTTSEEEECCTTCH-----HHHHHHHT-TCSEEEECCCGG
T ss_pred             cEEEEECCCHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhccCCcEEEecCCH-----HHHHHHHh-CCCEEEEecCCc
Confidence            469999999999998888754 34 78888999999888877543333443321     23444433 689999999876


Q ss_pred             HhHHHHHHHhhcCCcEEEEEcC
Q 017336          270 DNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       270 ~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      -....+-.|+..+ -.++.+..
T Consensus        89 ~~~~v~~~~~~~g-~~yvD~s~  109 (365)
T 3abi_A           89 LGFKSIKAAIKSK-VDMVDVSF  109 (365)
T ss_dssp             GHHHHHHHHHHHT-CEEEECCC
T ss_pred             ccchHHHHHHhcC-cceEeeec
Confidence            5667778888886 67776543

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.67  E-value=0.0064  Score=53.03  Aligned_cols=79  Identities=27%  Similarity=0.342  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCce-e--ecCCCCCccHHHHHHHHc--CCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~~d  260 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++... .  .|..+. ..+.+.+++..  -+++|
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~iD   81 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIE-EDWQRVVAYAREEFGSVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecCCCH-HHHHHHHHHHHHHcCCCC
Confidence            4688999987 8999999999999999 899999988776554 3444322 1  232221 11222222221  13799


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      ++|++.|.
T Consensus        82 ~lv~nAg~   89 (254)
T 1hdc_A           82 GLVNNAGI   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.66  E-value=0.012  Score=55.20  Aligned_cols=96  Identities=13%  Similarity=0.214  Sum_probs=68.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .+.+|+|+|.|-+|..+++.++..|. .|++++.++++.+.+++.|...++- +..+   .+.+++.--..+|+|+-+++
T Consensus         3 ~~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~G-Dat~---~~~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A            3 HGMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFYG-DATR---MDLLESAGAAKAEVLINAID   77 (413)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEES-CTTC---HHHHHHTTTTTCSEEEECCS
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEEc-CCCC---HHHHHhcCCCccCEEEECCC
Confidence            34679999999999999999999998 8999999999999999998764432 2222   12344432237999999999


Q ss_pred             ChHhH---HHHHHHhhcCCcEEEEE
Q 017336          268 NIDNM---ISAFECVHDGWGVAVLV  289 (373)
Q Consensus       268 ~~~~~---~~~~~~l~~~~g~~v~~  289 (373)
                      ..+.-   ....+.+.++ -+++.-
T Consensus        78 ~~~~n~~i~~~ar~~~p~-~~Iiar  101 (413)
T 3l9w_A           78 DPQTNLQLTEMVKEHFPH-LQIIAR  101 (413)
T ss_dssp             SHHHHHHHHHHHHHHCTT-CEEEEE
T ss_pred             ChHHHHHHHHHHHHhCCC-CeEEEE
Confidence            85432   2444555564 555544

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.64  E-value=0.012  Score=50.46  Aligned_cols=77  Identities=26%  Similarity=0.295  Sum_probs=50.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-----hcCCcee-e--cCCCCCccHHH---HHHHHcC
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-----KFGVTDF-V--NTSEHDRPIQE---VIAEMTN  256 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-----~lg~~~v-i--~~~~~~~~~~~---~~~~~~~  256 (373)
                      ++++||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+.     +.+.... +  |..+.+ .+.+   .+.+.. 
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~-   78 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAE-SVEEFSKKVLERF-   78 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHH-HHHHHCC-HHHHH-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHH-HHHHHHHHHHHhc-
Confidence            678999987 8999999999999999 7999999887765442     2343322 2  222211 1111   122222 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|++.|.
T Consensus        79 g~id~li~~Ag~   90 (235)
T 3l77_A           79 GDVDVVVANAGL   90 (235)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            379999999874

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.64  E-value=0.0071  Score=53.09  Aligned_cols=77  Identities=23%  Similarity=0.282  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hc-----CCce-e--ecCCCCCccHHHHHH---HH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF-----GVTD-F--VNTSEHDRPIQEVIA---EM  254 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~l-----g~~~-v--i~~~~~~~~~~~~~~---~~  254 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++     +... .  .|..+.+ .+.+.+.   +.
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~   89 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEA-QVEAYVTATTER   89 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHH-HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHH-HHHHHHHHHHHH
Confidence            4689999987 8999999999988999 8999999887655432 22     4322 2  2322211 1222222   22


Q ss_pred             cCCCccEEEEccC
Q 017336          255 TNGGVDRSVECTG  267 (373)
Q Consensus       255 ~~~~~d~vid~~g  267 (373)
                      . +++|++|++.|
T Consensus        90 ~-g~id~lv~nAg  101 (267)
T 1iy8_A           90 F-GRIDGFFNNAG  101 (267)
T ss_dssp             H-SCCSEEEECCC
T ss_pred             c-CCCCEEEECCC
Confidence            2 37999999987

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=96.64  E-value=0.006  Score=53.27  Aligned_cols=79  Identities=18%  Similarity=0.281  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCce-ee--cCCCCC--ccHHHHHHHHcCCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FV--NTSEHD--RPIQEVIAEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~~-vi--~~~~~~--~~~~~~~~~~~~~~~d  260 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. +++... .+  |..+.+  ..+.+.+.+.. +++|
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   84 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTL-GAID   84 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHH-SSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence            5789999987 8999999999999999 8999999988766654 344332 22  222211  01222222222 3799


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      +++++.|.
T Consensus        85 ~lv~nAg~   92 (255)
T 4eso_A           85 LLHINAGV   92 (255)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.64  E-value=0.012  Score=51.23  Aligned_cols=79  Identities=23%  Similarity=0.263  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCce-e--ecCCCCC--ccHHHHHHHHcCCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-F--VNTSEHD--RPIQEVIAEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~~-v--i~~~~~~--~~~~~~~~~~~~~~~d  260 (373)
                      .++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+. +++... .  .|..+.+  ..+.+.+.+.. +++|
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id   85 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKF-GKVD   85 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhc-CCCC
Confidence            4689999987 8999999999999999 8999999988776654 455432 2  2222211  01222222222 3799


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      ++|++.|.
T Consensus        86 ~li~~Ag~   93 (261)
T 3n74_A           86 ILVNNAGI   93 (261)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999873

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=96.63  E-value=0.0079  Score=52.52  Aligned_cols=104  Identities=23%  Similarity=0.254  Sum_probs=67.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCceee---cCCCCCccHHHHHHHHcC--C
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFV---NTSEHDRPIQEVIAEMTN--G  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~vi---~~~~~~~~~~~~~~~~~~--~  257 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|.+...   |..+. .++.+.+.+...  |
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~-~~v~~~~~~~~~~~G   85 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDE-LAIEAAFSKLDAEGI   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCH-HHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCH-HHHHHHHHHHHHHCC
Confidence            5789999987 8999999999999999 899999988765543    344544321   22221 112222333222  3


Q ss_pred             CccEEEEccCCh-------------------------HhHHHHHHHhh--cCCcEEEEEcCCC
Q 017336          258 GVDRSVECTGNI-------------------------DNMISAFECVH--DGWGVAVLVGVPS  293 (373)
Q Consensus       258 ~~d~vid~~g~~-------------------------~~~~~~~~~l~--~~~g~~v~~g~~~  293 (373)
                      +.|+++++.|..                         .....+++.|.  .++|+++.+++..
T Consensus        86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~  148 (255)
T 4g81_D           86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLT  148 (255)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehh
Confidence            799999998842                         12335566662  2348999998754

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=96.63  E-value=0.023  Score=49.90  Aligned_cols=102  Identities=23%  Similarity=0.274  Sum_probs=63.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHHHH----HHhcCCcee-e--cCCCCCccHHH---HHHHHc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEE----AKKFGVTDF-V--NTSEHDRPIQE---VIAEMT  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~-~~~~~~~----~~~lg~~~v-i--~~~~~~~~~~~---~~~~~~  255 (373)
                      .++++||+|+ +++|.++++.+...|+ +|+++.+ +.++.+.    +++.+.... +  |..+. ..+.+   .+.+..
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~   94 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQV-PEIVKLFDQAVAHF   94 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            5789999987 8999999999999999 7777654 4444333    334454332 2  22221 11222   222222


Q ss_pred             CCCccEEEEccCCh-------------------------HhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          256 NGGVDRSVECTGNI-------------------------DNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       256 ~~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                       +++|+++++.|..                         .....+++.+.++ |+++.++...
T Consensus        95 -g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~~  155 (270)
T 3is3_A           95 -GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEG-GRIVLTSSNT  155 (270)
T ss_dssp             -SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCTT
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CeEEEEeCch
Confidence             3799999998741                         1234556667775 9999998754

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=96.62  E-value=0.019  Score=50.56  Aligned_cols=101  Identities=24%  Similarity=0.332  Sum_probs=62.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHHHHH----HhcCCcee-e--cCCCCCccHHHHHH---HHc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTDF-V--NTSEHDRPIQEVIA---EMT  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~-~~~~~~~~----~~lg~~~v-i--~~~~~~~~~~~~~~---~~~  255 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++ +.++.+.+    ++.+.... +  |..+. ..+.+.+.   +..
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~  107 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDA-EAIEQAIRETVEAL  107 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCH-HHHHHHHHHHHHHc
Confidence            5789999987 8999999999999999 7777744 44443332    33454332 2  22221 11222222   222


Q ss_pred             CCCccEEEEccCCh-------------------------HhHHHHHHHhhcCCcEEEEEcCC
Q 017336          256 NGGVDRSVECTGNI-------------------------DNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       256 ~~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                       +++|++|++.|..                         ...+.+.+.|+.+ |+++.++..
T Consensus       108 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-g~iv~isS~  167 (271)
T 3v2g_A          108 -GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG-GRIITIGSN  167 (271)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCG
T ss_pred             -CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CEEEEEeCh
Confidence             3799999998741                         1233455566665 999998764

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.62  E-value=0.0072  Score=52.81  Aligned_cols=78  Identities=27%  Similarity=0.335  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCce-ee--cCCCCCccHHH---HHHHHcCCCc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-FV--NTSEHDRPIQE---VIAEMTNGGV  259 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~-vi--~~~~~~~~~~~---~~~~~~~~~~  259 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+ ++++... .+  |..+.+ .+.+   .+.+.. +++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~-g~i   83 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTRQD-SIDAAIAATVEHA-GGL   83 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHH-HHHHHHHHHHHHS-SSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHH-HHHHHHHHHHHHc-CCC
Confidence            4689999987 8999999999989999 899999988776554 3454432 22  322211 1222   222222 379


Q ss_pred             cEEEEccCC
Q 017336          260 DRSVECTGN  268 (373)
Q Consensus       260 d~vid~~g~  268 (373)
                      |++|++.|.
T Consensus        84 d~lv~~Ag~   92 (259)
T 4e6p_A           84 DILVNNAAL   92 (259)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999884

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.61  E-value=0.0089  Score=53.06  Aligned_cols=75  Identities=25%  Similarity=0.286  Sum_probs=51.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCc----eeecCCCCCccHHHHHHHHcCCCccE
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVT----DFVNTSEHDRPIQEVIAEMTNGGVDR  261 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~----~vi~~~~~~~~~~~~~~~~~~~~~d~  261 (373)
                      -.++++||+|+|++|.+++..+...|+++|++++++.++.+.+ ++++..    .+......+  +.+.+.     .+|+
T Consensus       125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~--l~~~l~-----~~Di  197 (283)
T 3jyo_A          125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG--IEDVIA-----AADG  197 (283)
T ss_dssp             CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT--HHHHHH-----HSSE
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH--HHHHHh-----cCCE
Confidence            3578999999999999999999999997899999998887654 333311    111111111  333332     4799


Q ss_pred             EEEccCC
Q 017336          262 SVECTGN  268 (373)
Q Consensus       262 vid~~g~  268 (373)
                      ||++++.
T Consensus       198 VInaTp~  204 (283)
T 3jyo_A          198 VVNATPM  204 (283)
T ss_dssp             EEECSST
T ss_pred             EEECCCC
Confidence            9999864

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.61  E-value=0.0067  Score=53.04  Aligned_cols=78  Identities=13%  Similarity=0.259  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce--e--ecCCCCC--ccHHHHHHHH
Q 017336          188 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD--F--VNTSEHD--RPIQEVIAEM  254 (373)
Q Consensus       188 ~~~~vlI~G~-g--~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~--v--i~~~~~~--~~~~~~~~~~  254 (373)
                      .|+++||+|+ |  ++|.+.++.+...|+ +|+.++++++.++.+.    +++...  .  .|..+.+  ..+.+.+.+.
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD   83 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5799999996 4  899999999999999 8999999877655543    344322  2  2322221  1122223333


Q ss_pred             cCCCccEEEEccC
Q 017336          255 TNGGVDRSVECTG  267 (373)
Q Consensus       255 ~~~~~d~vid~~g  267 (373)
                      . |++|+++++.|
T Consensus        84 ~-G~iD~lvnnAg   95 (256)
T 4fs3_A           84 V-GNIDGVYHSIA   95 (256)
T ss_dssp             H-CCCSEEEECCC
T ss_pred             h-CCCCEEEeccc
Confidence            3 37999999877

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.60  E-value=0.01  Score=51.88  Aligned_cols=78  Identities=32%  Similarity=0.471  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hc----CCce-e--ecCCCCCccHHHHHH---HHc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF----GVTD-F--VNTSEHDRPIQEVIA---EMT  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~l----g~~~-v--i~~~~~~~~~~~~~~---~~~  255 (373)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+. ++    +... .  .|..+.+ .+.+.+.   +..
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~   83 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPE-GVDAVVESVRSSF   83 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            4688999987 8999999999999999 8999999887655432 22    4332 1  2322211 1222222   222


Q ss_pred             CCCccEEEEccCC
Q 017336          256 NGGVDRSVECTGN  268 (373)
Q Consensus       256 ~~~~d~vid~~g~  268 (373)
                       +++|++|++.|.
T Consensus        84 -g~id~lv~~Ag~   95 (263)
T 3ai3_A           84 -GGADILVNNAGT   95 (263)
T ss_dssp             -SSCSEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             379999999873

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.59  E-value=0.0074  Score=53.15  Aligned_cols=78  Identities=19%  Similarity=0.315  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCceee--cCCCCCccHHHHH---HHHcCCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFV--NTSEHDRPIQEVI---AEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~~vi--~~~~~~~~~~~~~---~~~~~~~~d  260 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++..-..+  |..+.+ .+.+.+   .+.. +++|
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~-g~iD   84 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQED-DVKTLVSETIRRF-GRLD   84 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHH-HHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHH-HHHHHHHHHHHHc-CCCC
Confidence            4689999987 8999999999999999 8999999887766553 33221222  322211 122222   2222 3799


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      ++|++.|.
T Consensus        85 ~lv~nAg~   92 (270)
T 1yde_A           85 CVVNNAGH   92 (270)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.59  E-value=0.0063  Score=53.83  Aligned_cols=77  Identities=21%  Similarity=0.304  Sum_probs=50.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCC--ce-ee--cCCCCCccHHH---HHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV--TD-FV--NTSEHDRPIQE---VIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~--~~-vi--~~~~~~~~~~~---~~~~~~~~  257 (373)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ +++..  .. .+  |..+. ..+.+   .+.+.. +
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~-g  104 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYGDCQAIPADLSSE-AGARRLAQALGELS-A  104 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSH-HHHHHHHHHHHHHC-S
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCH-HHHHHHHHHHHHhc-C
Confidence            4688999987 8999999999999999 899999988765543 22311  11 11  22221 11222   222222 3


Q ss_pred             CccEEEEccC
Q 017336          258 GVDRSVECTG  267 (373)
Q Consensus       258 ~~d~vid~~g  267 (373)
                      ++|++|++.|
T Consensus       105 ~iD~lvnnAg  114 (276)
T 2b4q_A          105 RLDILVNNAG  114 (276)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.58  E-value=0.0079  Score=52.79  Aligned_cols=79  Identities=24%  Similarity=0.349  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCce-e--ecCCCCCccHHHHHHHHc--CCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~~d  260 (373)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. +++... .  .|..+.+ .+.+.+.+..  -+++|
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~g~iD   82 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDPK-AVEAVFAEALEEFGRLH   82 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHH-HHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHH-HHHHHHHHHHHHcCCCc
Confidence            4688999987 8999999999999999 8999999987766543 344221 1  2322211 1222222211  13799


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      ++|++.|.
T Consensus        83 ~lvnnAg~   90 (263)
T 2a4k_A           83 GVAHFAGV   90 (263)
T ss_dssp             EEEEGGGG
T ss_pred             EEEECCCC
Confidence            99999873

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=96.58  E-value=0.011  Score=51.41  Aligned_cols=78  Identities=21%  Similarity=0.208  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh-hHHH-HHHhcCCce-e--ecCCCCCccHHHHHH---HHcCCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFE-EAKKFGVTD-F--VNTSEHDRPIQEVIA---EMTNGG  258 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~-~~~~-~~~~lg~~~-v--i~~~~~~~~~~~~~~---~~~~~~  258 (373)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++ ++.+ .+++.+... .  .|..+.+ .+.+.+.   +.. ++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~-g~   82 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPG-DVEAFGKQVISTF-GR   82 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHH-SC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHH-HHHHHHHHHHHHc-CC
Confidence            4688999987 8999999999999999 899888876 5544 345555432 1  2322211 1222222   222 37


Q ss_pred             ccEEEEccCC
Q 017336          259 VDRSVECTGN  268 (373)
Q Consensus       259 ~d~vid~~g~  268 (373)
                      +|++|++.|.
T Consensus        83 id~lv~nAg~   92 (249)
T 2ew8_A           83 CDILVNNAGI   92 (249)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.58  E-value=0.009  Score=56.82  Aligned_cols=93  Identities=24%  Similarity=0.292  Sum_probs=70.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      --.|++|+|+|.|.+|..+++.++.+|+ +|++++++..+...+...|+.. .     +  +    .+... ..|+|+.+
T Consensus       254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~~~~~~a~~~g~~~-~-----~--l----~ell~-~aDiVi~~  319 (479)
T 1v8b_A          254 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFNV-V-----T--L----DEIVD-KGDFFITC  319 (479)
T ss_dssp             CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCEE-C-----C--H----HHHTT-TCSEEEEC
T ss_pred             ccCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCChhhHHHHHHcCCEe-c-----C--H----HHHHh-cCCEEEEC
Confidence            3478999999999999999999999999 8999999887754555666532 1     1  2    22222 58999999


Q ss_pred             cCChHhH-HHHHHHhhcCCcEEEEEcCCC
Q 017336          266 TGNIDNM-ISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       266 ~g~~~~~-~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      .+....+ ...++.|+++ ..++.+|...
T Consensus       320 ~~t~~lI~~~~l~~MK~g-ailiNvgrg~  347 (479)
T 1v8b_A          320 TGNVDVIKLEHLLKMKNN-AVVGNIGHFD  347 (479)
T ss_dssp             CSSSSSBCHHHHTTCCTT-CEEEECSSTT
T ss_pred             CChhhhcCHHHHhhcCCC-cEEEEeCCCC
Confidence            8765544 3677889997 8998888754

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.58  E-value=0.027  Score=50.18  Aligned_cols=103  Identities=17%  Similarity=0.190  Sum_probs=62.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh--hHHHH----HHhcCCceee---cCCCCC--ccHHHHHHHHc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRFEE----AKKFGVTDFV---NTSEHD--RPIQEVIAEMT  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~--~~~~~----~~~lg~~~vi---~~~~~~--~~~~~~~~~~~  255 (373)
                      .++++||+|+ |++|.+.+..+...|+ +|++++++.  ++.+.    +++.+....+   |..+.+  ..+.+.+.+..
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            5789999987 8999999999999999 788887762  22322    2344543322   222111  01222222222


Q ss_pred             CCCccEEEEccCCh-----------H---------------hHHHHHHHhhcCCcEEEEEcCCC
Q 017336          256 NGGVDRSVECTGNI-----------D---------------NMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       256 ~~~~d~vid~~g~~-----------~---------------~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                       +++|+++++.|..           +               ..+.++..+..+ |+++.++...
T Consensus       127 -g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-g~Iv~isS~~  188 (294)
T 3r3s_A          127 -GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKG-ASIITTSSIQ  188 (294)
T ss_dssp             -TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTT-CEEEEECCGG
T ss_pred             -CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC-CEEEEECChh
Confidence             3799999998741           0               122334455565 8999988753

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.58  E-value=0.0083  Score=52.03  Aligned_cols=78  Identities=21%  Similarity=0.342  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-e--ecCCCCCccHHHHHH---HHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIA---EMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-v--i~~~~~~~~~~~~~~---~~~~  256 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.    +.+... .  .|..+.+ .+.+.+.   +.. 
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~-   82 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQ-GVDAAVASTVEAL-   82 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHH-HHHHHHHHHHHHc-
Confidence            4689999987 8999999999999999 8999999887765442    234332 2  2322211 1222222   222 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|++.|.
T Consensus        83 g~id~lv~nAg~   94 (247)
T 2jah_A           83 GGLDILVNNAGI   94 (247)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998873

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.58  E-value=0.025  Score=50.20  Aligned_cols=87  Identities=21%  Similarity=0.225  Sum_probs=61.5

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      .+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+...   .+    ..+.+.     ..|+||.|+..+
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~---~~----~~~~~~-----~aDvvi~~vp~~   68 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGAERA---AT----PCEVVE-----SCPVTFAMLADP   68 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC---SS----HHHHHH-----HCSEEEECCSSH
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec---CC----HHHHHh-----cCCEEEEEcCCH
Confidence            479999999999999999989998 89999999999888888776421   11    333232     368888888865


Q ss_pred             HhHHHHH-------HHhhcCCcEEEEEc
Q 017336          270 DNMISAF-------ECVHDGWGVAVLVG  290 (373)
Q Consensus       270 ~~~~~~~-------~~l~~~~g~~v~~g  290 (373)
                      ......+       ..++++ ..++..+
T Consensus        69 ~~~~~v~~~~~~l~~~l~~~-~~vi~~s   95 (287)
T 3pef_A           69 AAAEEVCFGKHGVLEGIGEG-RGYVDMS   95 (287)
T ss_dssp             HHHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred             HHHHHHHcCcchHhhcCCCC-CEEEeCC
Confidence            4444444       455564 5555553

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.58  E-value=0.008  Score=51.98  Aligned_cols=79  Identities=19%  Similarity=0.261  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCc--eee--cCCCCCcc-H---HHHHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVT--DFV--NTSEHDRP-I---QEVIAEM  254 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~--~vi--~~~~~~~~-~---~~~~~~~  254 (373)
                      .++++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+.    +.+..  .++  +.+..+.+ +   .+.+.+.
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            5789999987 8999999999999999 8999999987765543    23321  122  22212211 2   2222222


Q ss_pred             cCCCccEEEEccCC
Q 017336          255 TNGGVDRSVECTGN  268 (373)
Q Consensus       255 ~~~~~d~vid~~g~  268 (373)
                      . +++|++|++.|.
T Consensus        92 ~-g~id~lv~nAg~  104 (247)
T 3i1j_A           92 F-GRLDGLLHNASI  104 (247)
T ss_dssp             H-SCCSEEEECCCC
T ss_pred             C-CCCCEEEECCcc
Confidence            2 379999999874

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=96.57  E-value=0.0076  Score=51.66  Aligned_cols=76  Identities=20%  Similarity=0.251  Sum_probs=50.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcC-Ccee-ecCCCCCccHHHHH---HHHcCCCccE
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFG-VTDF-VNTSEHDRPIQEVI---AEMTNGGVDR  261 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg-~~~v-i~~~~~~~~~~~~~---~~~~~~~~d~  261 (373)
                      +++|||+|+ |.+|...+..+...|+ +|++++++.++.+.+. +++ +..+ .|..+.+ .+.+.+   .+.. +++|+
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~-~~id~   81 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELEGALPLPGDVREEG-DWARAVAAMEEAF-GELSA   81 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHH-HHHHHHHHHHHHH-SCCCE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhhceEEEecCCCHH-HHHHHHHHHHHHc-CCCCE
Confidence            578999987 8999999999999999 8999999887766543 343 2221 2322211 122222   2222 37999


Q ss_pred             EEEccC
Q 017336          262 SVECTG  267 (373)
Q Consensus       262 vid~~g  267 (373)
                      +|++.|
T Consensus        82 li~~Ag   87 (234)
T 2ehd_A           82 LVNNAG   87 (234)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=96.57  E-value=0.0065  Score=53.56  Aligned_cols=78  Identities=21%  Similarity=0.225  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-e--ecCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-v--i~~~~~~--~~~~~~~~~~~~~  257 (373)
                      .++++||+|+ |++|.+++..+...|+ +|+++++++++.+.+.    +.+... .  .|..+.+  ..+.+.+.+.. +
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g  104 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF-G  104 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc-C
Confidence            4688999987 8999999999989999 8999999887665442    234322 1  2332211  01222222222 3


Q ss_pred             CccEEEEccC
Q 017336          258 GVDRSVECTG  267 (373)
Q Consensus       258 ~~d~vid~~g  267 (373)
                      ++|++|++.|
T Consensus       105 ~iD~lvnnAg  114 (270)
T 3ftp_A          105 ALNVLVNNAG  114 (270)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.57  E-value=0.01  Score=51.77  Aligned_cols=79  Identities=19%  Similarity=0.285  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-e--ecCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-v--i~~~~~~--~~~~~~~~~~~~~  257 (373)
                      .++++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+.    +.+... .  .|..+.+  ..+.+.+.+...+
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999987 8999999999989999 8999999887655432    234322 1  2322211  0122223333325


Q ss_pred             CccEEEEccC
Q 017336          258 GVDRSVECTG  267 (373)
Q Consensus       258 ~~d~vid~~g  267 (373)
                      ++|++|++.|
T Consensus        87 ~id~lv~~Ag   96 (260)
T 2ae2_A           87 KLNILVNNAG   96 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.56  E-value=0.0082  Score=51.94  Aligned_cols=79  Identities=25%  Similarity=0.314  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIAEMT--NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~  257 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    +.+... .  .|..+. ..+.+.+.+..  .+
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISDI-ESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCH-HHHHHHHHHHHHHcC
Confidence            4688999987 8999999999989999 8999999887665543    334432 2  232221 11222233222  23


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus        82 ~id~li~~Ag~   92 (247)
T 3lyl_A           82 AIDILVNNAGI   92 (247)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.56  E-value=0.0065  Score=53.28  Aligned_cols=79  Identities=25%  Similarity=0.297  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcC-Cce-ee--cCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFG-VTD-FV--NTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg-~~~-vi--~~~~~~--~~~~~~~~~~~~  256 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+    ++.+ ... .+  |..+.+  ..+.+.+.+.. 
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   86 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF-   86 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh-
Confidence            4689999987 8999999999999999 899999998776543    2333 221 22  222211  01222222222 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|+++++.|.
T Consensus        87 g~id~lvnnAg~   98 (262)
T 3pk0_A           87 GGIDVVCANAGV   98 (262)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999883

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.56  E-value=0.0088  Score=50.98  Aligned_cols=102  Identities=14%  Similarity=0.068  Sum_probs=69.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-----CcEEEEEcCChhHHHHHHhc----C-----Cce--eecCCCCCccHH
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAG-----ASRIIGVDRSSKRFEEAKKF----G-----VTD--FVNTSEHDRPIQ  248 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g-----~~~V~~~~~~~~~~~~~~~l----g-----~~~--vi~~~~~~~~~~  248 (373)
                      .++++++||-+|+|. |..++.+++..+     ..+|++++.+++..+.+++.    +     ...  ++..+... .+.
T Consensus        77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~  154 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQ-VNE  154 (227)
T ss_dssp             TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGG-CCH
T ss_pred             hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHh-ccc
Confidence            578899999999976 888888998876     12899999999888777652    3     221  22111110 010


Q ss_pred             HHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          249 EVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       249 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      +..  ...+.||+|+........+..+.+.|+++ |++++.-.
T Consensus       155 ~~~--~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lv~~~~  194 (227)
T 2pbf_A          155 EEK--KELGLFDAIHVGASASELPEILVDLLAEN-GKLIIPIE  194 (227)
T ss_dssp             HHH--HHHCCEEEEEECSBBSSCCHHHHHHEEEE-EEEEEEEE
T ss_pred             ccC--ccCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEEc
Confidence            000  11247999998877667788999999997 98877643

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.56  E-value=0.00098  Score=57.68  Aligned_cols=100  Identities=16%  Similarity=0.167  Sum_probs=66.6

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce--eecCCCCCccHHHHHHHHcCCCccEE-
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRS-  262 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~--vi~~~~~~~~~~~~~~~~~~~~~d~v-  262 (373)
                      ..+|.+||-+|+|. |..+..+++..+. +|++++.+++-.+.+++.....  -+.....+  +.+....+..+.||.| 
T Consensus        58 ~~~G~rVLdiG~G~-G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~--a~~~~~~~~~~~FD~i~  133 (236)
T 3orh_A           58 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGL--WEDVAPTLPDGHFDGIL  133 (236)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESC--HHHHGGGSCTTCEEEEE
T ss_pred             ccCCCeEEEECCCc-cHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEeeh--HHhhcccccccCCceEE
Confidence            46889999999974 7777788877665 8999999999888887643221  01111111  3333333444479887 


Q ss_pred             EEccCC----------hHhHHHHHHHhhcCCcEEEEEc
Q 017336          263 VECTGN----------IDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       263 id~~g~----------~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      +|++..          ..++..+.+.|+|+ |+++.+.
T Consensus       134 ~D~~~~~~~~~~~~~~~~~~~e~~rvLkPG-G~l~f~~  170 (236)
T 3orh_A          134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCN  170 (236)
T ss_dssp             ECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECC
T ss_pred             EeeeecccchhhhcchhhhhhhhhheeCCC-CEEEEEe
Confidence            454332          13567889999997 9998764

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.56  E-value=0.0083  Score=52.85  Aligned_cols=79  Identities=22%  Similarity=0.232  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~  257 (373)
                      .++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+    ++.+... +  .|..+. ..+.+.+.+..  -+
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g  107 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNR-EDIYSSAKKVKAEIG  107 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCH-HHHHHHHHHHHHHCC
Confidence            4689999987 8999999999999999 899999988765543    2234332 2  232221 11222222221  13


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus       108 ~iD~li~~Ag~  118 (272)
T 1yb1_A          108 DVSILVNNAGV  118 (272)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCcEEEECCCc
Confidence            79999999873

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.56  E-value=0.0067  Score=53.72  Aligned_cols=79  Identities=22%  Similarity=0.412  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCC---ce-e--ecCCCCC--ccHHHHHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGV---TD-F--VNTSEHD--RPIQEVIAEM  254 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~---~~-v--i~~~~~~--~~~~~~~~~~  254 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+    ++.+.   .. .  .|..+.+  ..+.+.+.+.
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            4689999987 8999999999989999 899999988765443    33333   11 1  2222211  0122222222


Q ss_pred             cCCCccEEEEccCC
Q 017336          255 TNGGVDRSVECTGN  268 (373)
Q Consensus       255 ~~~~~d~vid~~g~  268 (373)
                      . +++|+++++.|.
T Consensus        89 ~-g~id~lv~nAg~  101 (281)
T 3svt_A           89 H-GRLHGVVHCAGG  101 (281)
T ss_dssp             H-SCCCEEEECCCC
T ss_pred             c-CCCCEEEECCCc
Confidence            2 379999999884

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.55  E-value=0.0081  Score=53.16  Aligned_cols=79  Identities=23%  Similarity=0.185  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCce-e--ecCCCCC--ccHHHHHHHHcCCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-F--VNTSEHD--RPIQEVIAEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~~-v--i~~~~~~--~~~~~~~~~~~~~~~d  260 (373)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. +++... .  .|..+.+  ..+.+.+.+.. +++|
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD  103 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKW-GRVD  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            4689999987 8999999999999999 8999999887766543 455432 1  2322211  01222222222 3799


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      ++|++.|.
T Consensus       104 ~lv~nAg~  111 (277)
T 4dqx_A          104 VLVNNAGF  111 (277)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999883

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.55  E-value=0.011  Score=51.93  Aligned_cols=78  Identities=27%  Similarity=0.440  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-H----hcCCce-e--ecCCCCCccHHHHH---HHHc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-K----KFGVTD-F--VNTSEHDRPIQEVI---AEMT  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~----~lg~~~-v--i~~~~~~~~~~~~~---~~~~  255 (373)
                      .++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+ +    +.+... .  .|..+.+ .+.+.+   .+..
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~   97 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYE-EVKKLLEAVKEKF   97 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            4689999987 8999999999999999 899998987765443 2    225432 1  2332211 122222   2222


Q ss_pred             CCCccEEEEccCC
Q 017336          256 NGGVDRSVECTGN  268 (373)
Q Consensus       256 ~~~~d~vid~~g~  268 (373)
                       +++|++|++.|.
T Consensus        98 -g~iD~lvnnAg~  109 (267)
T 1vl8_A           98 -GKLDTVVNAAGI  109 (267)
T ss_dssp             -SCCCEEEECCCC
T ss_pred             -CCCCEEEECCCc
Confidence             379999999873

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.53  E-value=0.0021  Score=58.16  Aligned_cols=104  Identities=21%  Similarity=0.199  Sum_probs=70.5

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM  254 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~  254 (373)
                      +.....++++++||-+|+|. |..++.+++..+. .+|++++.+++..+.+++    .|...+ .....+  ..+..  .
T Consensus        67 l~~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v-~~~~~d--~~~~~--~  140 (317)
T 1dl5_A           67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENV-IFVCGD--GYYGV--P  140 (317)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSE-EEEESC--GGGCC--G
T ss_pred             HHHhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCe-EEEECC--hhhcc--c
Confidence            34556788999999999976 8888888887642 379999999988887765    354332 111111  10000  0


Q ss_pred             cCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEc
Q 017336          255 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       255 ~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      ..+.+|+|+....-......+.+.|+++ |++++.-
T Consensus       141 ~~~~fD~Iv~~~~~~~~~~~~~~~Lkpg-G~lvi~~  175 (317)
T 1dl5_A          141 EFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVPI  175 (317)
T ss_dssp             GGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEEB
T ss_pred             cCCCeEEEEEcCCHHHHHHHHHHhcCCC-cEEEEEE
Confidence            1247999998866545557888999997 9887763

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.53  E-value=0.0082  Score=52.63  Aligned_cols=79  Identities=19%  Similarity=0.262  Sum_probs=52.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-ee--cCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FV--NTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-vi--~~~~~~--~~~~~~~~~~~~~  257 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|++++++.++.+.+.    +.+... .+  |..+.+  ..+.+.+.+.. +
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   87 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY-G   87 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-S
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            5789999987 8999999999999999 8999999887765543    234332 22  322211  01222233332 3


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus        88 ~id~lv~nAg~   98 (264)
T 3ucx_A           88 RVDVVINNAFR   98 (264)
T ss_dssp             CCSEEEECCCS
T ss_pred             CCcEEEECCCC
Confidence            79999999864

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.53  E-value=0.0043  Score=53.38  Aligned_cols=97  Identities=9%  Similarity=0.028  Sum_probs=62.6

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      ++|||+|+ |.+|...++.+...| + +|+++++++++.+.+...++..+ .|..+     .+.+.+... ++|+||++.
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d-----~~~~~~~~~-~~D~vv~~a   96 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYPTNSQIIMGDVLN-----HAALKQAMQ-GQDIVYANL   96 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCCTTEEEEECCTTC-----HHHHHHHHT-TCSEEEEEC
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhcccccCCcEEEEecCCC-----HHHHHHHhc-CCCEEEEcC
Confidence            68999997 999999999999999 7 89999898776543322233222 22222     123444333 689999998


Q ss_pred             CChHh---HHHHHHHhhcC-CcEEEEEcCCC
Q 017336          267 GNIDN---MISAFECVHDG-WGVAVLVGVPS  293 (373)
Q Consensus       267 g~~~~---~~~~~~~l~~~-~g~~v~~g~~~  293 (373)
                      +....   .+.+++.+... .+++|.++...
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~  127 (236)
T 3qvo_A           97 TGEDLDIQANSVIAAMKACDVKRLIFVLSLG  127 (236)
T ss_dssp             CSTTHHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred             CCCchhHHHHHHHHHHHHcCCCEEEEEecce
Confidence            86432   23445555442 26899887743

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.53  E-value=0.017  Score=50.15  Aligned_cols=73  Identities=21%  Similarity=0.233  Sum_probs=49.8

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336          187 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       187 ~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vid  264 (373)
                      -.++++||+|+ |.+|.++++.+...|+ +|++++++++.   +++++...+ .|. ..  ++.+.+.+. . ++|++|+
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~---~~~~~~~~~~~D~-~~--~~~~~~~~~-~-~iD~lv~   87 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEEL---LKRSGHRYVVCDL-RK--DLDLLFEKV-K-EVDILVL   87 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHH---HHHTCSEEEECCT-TT--CHHHHHHHS-C-CCSEEEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHH---HHhhCCeEEEeeH-HH--HHHHHHHHh-c-CCCEEEE
Confidence            35789999987 8999999999989999 89999888744   334442222 232 11  233333332 2 7999999


Q ss_pred             ccCC
Q 017336          265 CTGN  268 (373)
Q Consensus       265 ~~g~  268 (373)
                      +.|.
T Consensus        88 ~Ag~   91 (249)
T 1o5i_A           88 NAGG   91 (249)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9873

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.52  E-value=0.015  Score=52.24  Aligned_cols=89  Identities=16%  Similarity=0.243  Sum_probs=66.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .+++|.|+|.|.+|...++.++.+|+ +|++.+++.++ +.+.++|+..+      +  +.+.+.     ..|+|+.++.
T Consensus       141 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~------~--l~ell~-----~aDvV~l~~p  205 (307)
T 1wwk_A          141 EGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNE-ERAKEVNGKFV------D--LETLLK-----ESDVVTIHVP  205 (307)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHTTCEEC------C--HHHHHH-----HCSEEEECCC
T ss_pred             CCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCCh-hhHhhcCcccc------C--HHHHHh-----hCCEEEEecC
Confidence            57899999999999999999999999 89999988776 56677786431      1  333222     4799999877


Q ss_pred             ChH----hH-HHHHHHhhcCCcEEEEEcCC
Q 017336          268 NID----NM-ISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       268 ~~~----~~-~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ..+    .+ ...+..|+++ +.++.++..
T Consensus       206 ~~~~t~~li~~~~l~~mk~g-a~lin~arg  234 (307)
T 1wwk_A          206 LVESTYHLINEERLKLMKKT-AILINTSRG  234 (307)
T ss_dssp             CSTTTTTCBCHHHHHHSCTT-CEEEECSCG
T ss_pred             CChHHhhhcCHHHHhcCCCC-eEEEECCCC
Confidence            422    22 4567889996 888887663

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.52  E-value=0.0091  Score=53.02  Aligned_cols=79  Identities=19%  Similarity=0.217  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c---CCce-ee--cCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F---GVTD-FV--NTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-l---g~~~-vi--~~~~~~--~~~~~~~~~~~~~  257 (373)
                      +++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+.+ +   +... .+  |..+.+  ..+.+.+.+.. +
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g  104 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF-G  104 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence            4689999987 8999999999999999 89999998877655432 2   3322 22  222211  01222232322 3


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|+++++.|.
T Consensus       105 ~iD~lVnnAg~  115 (283)
T 3v8b_A          105 HLDIVVANAGI  115 (283)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.52  E-value=0.0052  Score=51.10  Aligned_cols=102  Identities=21%  Similarity=0.245  Sum_probs=68.1

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh----cCC-ceeecCCCCCccHHHHHHHHcCC
Q 017336          184 AKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGV-TDFVNTSEHDRPIQEVIAEMTNG  257 (373)
Q Consensus       184 ~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~----lg~-~~vi~~~~~~~~~~~~~~~~~~~  257 (373)
                      ..++++++||-+|+|. |..++.+++..+ ..+|++++.+++..+.+++    .|. ..+ .....+  +. .+.....+
T Consensus        18 ~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v-~~~~~d--~~-~~~~~~~~   92 (197)
T 3eey_A           18 MFVKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRV-TLIKDG--HQ-NMDKYIDC   92 (197)
T ss_dssp             HHCCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGE-EEECSC--GG-GGGGTCCS
T ss_pred             hcCCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCe-EEEECC--HH-HHhhhccC
Confidence            4577889999999876 788888888864 2389999999988877755    343 221 111111  10 11112234


Q ss_pred             CccEEEEccCC---------------hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          258 GVDRSVECTGN---------------IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       258 ~~d~vid~~g~---------------~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      .+|+|+...+-               ...+..+.+.|+++ |++++...
T Consensus        93 ~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~  140 (197)
T 3eey_A           93 PVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG-GIITVVIY  140 (197)
T ss_dssp             CEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             CceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCC-CEEEEEEc
Confidence            79999866532               25788999999997 99987753

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=96.51  E-value=0.0094  Score=52.18  Aligned_cols=78  Identities=23%  Similarity=0.329  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-e--ecCCCCCccHH---HHHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQ---EVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-v--i~~~~~~~~~~---~~~~~~~~  256 (373)
                      .++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+.    +.+... +  .|..+.+ .+.   +.+.+.. 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~-   82 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEE-AVIGTVDSVVRDF-   82 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHH-HHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHH-HHHHHHHHHHHHh-
Confidence            4689999987 8999999999999999 8999989877655432    234332 1  2322211 122   2222222 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|++.|.
T Consensus        83 g~id~lv~nAg~   94 (262)
T 1zem_A           83 GKIDFLFNNAGY   94 (262)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998873

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=96.51  E-value=0.0037  Score=54.14  Aligned_cols=74  Identities=14%  Similarity=0.237  Sum_probs=46.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHH-----HHHcC--CCc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI-----AEMTN--GGV  259 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~-----~~~~~--~~~  259 (373)
                      .++++||+|+ |++|.+.++.+.. |+ +|+++++++++.+.+.+..-...+..   +  +.+..     .+...  +++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~---D--~~~~~~~~~~~~~~~~~~~i   76 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEHLAALAEIEGVEPIES---D--IVKEVLEEGGVDKLKNLDHV   76 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHHTSTTEEEEEC---C--HHHHHHTSSSCGGGTTCSCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHhhcCCcceec---c--cchHHHHHHHHHHHHhcCCC
Confidence            3688999987 8999988877765 87 89999999888877766432122211   1  21111     11111  379


Q ss_pred             cEEEEccCC
Q 017336          260 DRSVECTGN  268 (373)
Q Consensus       260 d~vid~~g~  268 (373)
                      |++|++.|.
T Consensus        77 d~lv~~Ag~   85 (245)
T 3e9n_A           77 DTLVHAAAV   85 (245)
T ss_dssp             SEEEECC--
T ss_pred             CEEEECCCc
Confidence            999999874

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.50  E-value=0.011  Score=52.68  Aligned_cols=36  Identities=31%  Similarity=0.445  Sum_probs=32.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      ...+|+|+|+|++|..+++.+.+.|..++..++.+.
T Consensus        35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            357899999999999999999999999999998765

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.50  E-value=0.0079  Score=53.31  Aligned_cols=79  Identities=20%  Similarity=0.267  Sum_probs=53.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCcee---ecCCCCC--ccHHHHHHHHcCCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDF---VNTSEHD--RPIQEVIAEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~v---i~~~~~~--~~~~~~~~~~~~~~~d  260 (373)
                      .++++||+|+ +++|.+++..+...|+ +|++++++.++.+.+.+ ++....   .|..+.+  ..+.+.+.+.. +++|
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   81 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAF-GKID   81 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhc-CCCC
Confidence            4689999987 8999999999999999 89999999887766543 443321   2222211  11222233333 3799


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      +++++.|.
T Consensus        82 ~lvnnAg~   89 (281)
T 3zv4_A           82 TLIPNAGI   89 (281)
T ss_dssp             EEECCCCC
T ss_pred             EEEECCCc
Confidence            99999874

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.50  E-value=0.0058  Score=54.12  Aligned_cols=77  Identities=25%  Similarity=0.288  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-h---cCC---ce-e--ecCCCCCccHHH---HHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K---FGV---TD-F--VNTSEHDRPIQE---VIAE  253 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~---lg~---~~-v--i~~~~~~~~~~~---~~~~  253 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +   .+.   .. .  .|..+.+ .+.+   .+.+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~   82 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTED-GQDQIINSTLK   82 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHH-HHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHH-HHHHHHHHHHH
Confidence            4688999987 8999999999989999 8999999887665442 2   232   21 2  2322211 1222   2222


Q ss_pred             HcCCCccEEEEccC
Q 017336          254 MTNGGVDRSVECTG  267 (373)
Q Consensus       254 ~~~~~~d~vid~~g  267 (373)
                      .. +++|++|++.|
T Consensus        83 ~~-g~iD~lv~nAg   95 (280)
T 1xkq_A           83 QF-GKIDVLVNNAG   95 (280)
T ss_dssp             HH-SCCCEEEECCC
T ss_pred             hc-CCCCEEEECCC
Confidence            22 37999999987

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.50  E-value=0.0073  Score=52.74  Aligned_cols=79  Identities=20%  Similarity=0.236  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-ee--cCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FV--NTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-vi--~~~~~~--~~~~~~~~~~~~~  257 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.    +.+... .+  |..+.+  ..+.+.+.+.. +
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g   88 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF-G   88 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-C
Confidence            4789999987 8999999998888999 8999999887665443    334432 12  222211  01222222322 3


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|+++++.|.
T Consensus        89 ~id~lv~nAg~   99 (256)
T 3gaf_A           89 KITVLVNNAGG   99 (256)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=96.50  E-value=0.015  Score=51.07  Aligned_cols=102  Identities=21%  Similarity=0.239  Sum_probs=62.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE-cCChhHHHHH----HhcCCcee---ecCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEA----KKFGVTDF---VNTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~-~~~~~~~~~~----~~lg~~~v---i~~~~~~--~~~~~~~~~~~~  256 (373)
                      .++++||+|+ |++|.++++.+...|+ +|+++ .+++++.+.+    ++.+....   .|..+.+  ..+.+.+.+.. 
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-  103 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF-  103 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            5789999987 8999999998888899 67666 4555444433    33444322   2332211  11222232332 


Q ss_pred             CCccEEEEccCCh----------H---------------hHHHHHHHhhcCCcEEEEEcCC
Q 017336          257 GGVDRSVECTGNI----------D---------------NMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       257 ~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      +++|++|++.|..          +               ....+.+.++.+ |+++.++..
T Consensus       104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-g~iv~isS~  163 (267)
T 3u5t_A          104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG-GRIINMSTS  163 (267)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CeEEEEeCh
Confidence            3799999998741          1               233455566665 899998764

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.50  E-value=0.0088  Score=52.94  Aligned_cols=78  Identities=23%  Similarity=0.314  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-e--ecCCCCCccHHH---HHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQE---VIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-v--i~~~~~~~~~~~---~~~~~~~  256 (373)
                      .++++||+|+ |++|.+++..+...|+ +|+++++++++.+.+.    +.+... .  .|..+.+ .+.+   .+.+.. 
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~-   99 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTD-EVHAAVAAAVERF-   99 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHH-HHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHH-HHHHHHHHHHHHc-
Confidence            5789999987 8999999998888999 8999999887765442    334432 1  2322211 1222   222222 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|++.|.
T Consensus       100 g~id~lv~nAg~  111 (279)
T 3sju_A          100 GPIGILVNSAGR  111 (279)
T ss_dssp             CSCCEEEECCCC
T ss_pred             CCCcEEEECCCC
Confidence            379999999874

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=96.49  E-value=0.0062  Score=53.36  Aligned_cols=78  Identities=23%  Similarity=0.285  Sum_probs=52.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-e--ecCCCCCccHHH---HHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQE---VIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-v--i~~~~~~~~~~~---~~~~~~~  256 (373)
                      .++++||+|+ |++|.+.+..+...|+ +|++++++.++.+.+.    +.+... +  .|..+.+ .+.+   .+.+.. 
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~-  104 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSD-AIAAFATGVLAAH-  104 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHH-HHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHH-HHHHHHHHHHHhc-
Confidence            5689999987 8999999999888999 7999999987765543    234332 2  2322211 1222   222222 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|++.|.
T Consensus       105 g~id~lv~~Ag~  116 (262)
T 3rkr_A          105 GRCDVLVNNAGV  116 (262)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999885

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=96.49  E-value=0.0067  Score=52.71  Aligned_cols=79  Identities=27%  Similarity=0.353  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCce-e--ecCCCCC--ccHHHHHHHHcCCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-F--VNTSEHD--RPIQEVIAEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~-v--i~~~~~~--~~~~~~~~~~~~~~~d  260 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+ ++... .  .|..+.+  ..+.+.+.+.. +++|
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD   85 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEF-GGVD   85 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHH-CCCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHc-CCCC
Confidence            4789999987 8999999999999999 89999998877665533 33221 1  2332221  11222232322 3799


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      +++++.|.
T Consensus        86 ~lv~nAg~   93 (248)
T 3op4_A           86 ILVNNAGI   93 (248)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999883

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.49  E-value=0.0099  Score=52.01  Aligned_cols=77  Identities=14%  Similarity=0.220  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCc-ee--ecCCCCCccHHHHHH---HHcCCCc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT-DF--VNTSEHDRPIQEVIA---EMTNGGV  259 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~-~v--i~~~~~~~~~~~~~~---~~~~~~~  259 (373)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+. ++... ..  .|..+.+ .+.+.+.   +.. +++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~-g~i   82 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQPA-QWKAAVDTAVTAF-GGL   82 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHH-HHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHH-HHHHHHHHHHHHc-CCC
Confidence            4688999987 8999999999988999 8999989887765543 34321 11  2322211 1222222   222 379


Q ss_pred             cEEEEccC
Q 017336          260 DRSVECTG  267 (373)
Q Consensus       260 d~vid~~g  267 (373)
                      |++|++.|
T Consensus        83 D~lv~~Ag   90 (260)
T 1nff_A           83 HVLVNNAG   90 (260)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.47  E-value=0.012  Score=51.94  Aligned_cols=80  Identities=28%  Similarity=0.262  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc---CCce-eecCCCCCccHHHHHHHHc--CCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF---GVTD-FVNTSEHDRPIQEVIAEMT--NGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l---g~~~-vi~~~~~~~~~~~~~~~~~--~~~~d  260 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++++..+.++++   +... .+..+-.+.+-.+.+.+..  .+++|
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD  108 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVD  108 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCc
Confidence            4789999987 8999999999999999 788888766544444433   3322 2211211211222222211  14799


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      ++|++.|.
T Consensus       109 ~lv~nAg~  116 (273)
T 3uf0_A          109 VLVNNAGI  116 (273)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=96.47  E-value=0.0093  Score=52.38  Aligned_cols=79  Identities=27%  Similarity=0.411  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-----cCCce-e--ecCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTD-F--VNTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-----lg~~~-v--i~~~~~~--~~~~~~~~~~~~  256 (373)
                      .++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+.+     .+... .  .|..+.+  ..+.+.+.+.. 
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   96 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF-   96 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc-
Confidence            4689999987 8999999999999999 89999998877654422     34332 1  2333332  11222333332 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|++.|.
T Consensus        97 g~id~lv~nAg~  108 (266)
T 4egf_A           97 GGLDVLVNNAGI  108 (266)
T ss_dssp             TSCSEEEEECCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999873

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=96.47  E-value=0.014  Score=51.18  Aligned_cols=79  Identities=19%  Similarity=0.109  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcC--Cce-eecCCCCCccHHHHHHHHcCCCc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFG--VTD-FVNTSEHDRPIQEVIAEMTNGGV  259 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg--~~~-vi~~~~~~~~~~~~~~~~~~~~~  259 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.+  ... .+..+-.+.+..+.+.+.. +++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-g~i   86 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKY-PKV   86 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHC-CCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhc-CCC
Confidence            4689999987 8999999999989999 8999999887654432    222  211 1211212212233333332 379


Q ss_pred             cEEEEccCC
Q 017336          260 DRSVECTGN  268 (373)
Q Consensus       260 d~vid~~g~  268 (373)
                      |+++++.|.
T Consensus        87 d~lv~nAg~   95 (267)
T 3t4x_A           87 DILINNLGI   95 (267)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=96.47  E-value=0.014  Score=50.89  Aligned_cols=79  Identities=16%  Similarity=0.244  Sum_probs=48.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE-cCChhHHHH----HHhcCCce-ee--cCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEE----AKKFGVTD-FV--NTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~-~~~~~~~~~----~~~lg~~~-vi--~~~~~~--~~~~~~~~~~~~  256 (373)
                      .++++||+|+ |++|.++++.+...|+ +|+++ .+++++.+.    +++.+... .+  |..+.+  ..+.+.+.+.. 
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   84 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF-   84 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh-
Confidence            4789999987 8999999999989999 77777 555544333    23344432 22  222211  11222222222 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|+++++.|.
T Consensus        85 g~id~lv~nAg~   96 (259)
T 3edm_A           85 GEIHGLVHVAGG   96 (259)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999998873

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=96.47  E-value=0.0085  Score=52.78  Aligned_cols=79  Identities=19%  Similarity=0.284  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCce-e--ecCCCCC--ccHHHHHHHHcCCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-F--VNTSEHD--RPIQEVIAEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~-v--i~~~~~~--~~~~~~~~~~~~~~~d  260 (373)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++++... .  .|..+.+  ..+.+.+.+.. +++|
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   87 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTF-GRLD   87 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            4689999987 8999999999999999 899999987765544 4455432 1  2332211  01222222222 3799


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      +++++.|.
T Consensus        88 ~lv~nAg~   95 (271)
T 3tzq_B           88 IVDNNAAH   95 (271)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.47  E-value=0.019  Score=52.81  Aligned_cols=96  Identities=17%  Similarity=0.148  Sum_probs=66.2

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC----hhH---------HHHHHhcCCceeecCCCCCccHHHHHH
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS----SKR---------FEEAKKFGVTDFVNTSEHDRPIQEVIA  252 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~----~~~---------~~~~~~lg~~~vi~~~~~~~~~~~~~~  252 (373)
                      --++.+|+|+|+|..|..+++++..+|+++|++++++    .+|         .+++++.+..    ....  ++.+.+ 
T Consensus       189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~----~~~~--~L~eav-  261 (388)
T 1vl6_A          189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPE----RLSG--DLETAL-  261 (388)
T ss_dssp             CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTT----CCCS--CHHHHH-
T ss_pred             CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhcc----Cchh--hHHHHH-
Confidence            3467899999999999999999999999899999987    544         4444443321    0111  244444 


Q ss_pred             HHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          253 EMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       253 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                         . ++|++|-+++..-+-++.++.|+++ ..++.+..+.
T Consensus       262 ---~-~ADVlIG~Sap~l~t~emVk~Ma~~-pIIfalSNPt  297 (388)
T 1vl6_A          262 ---E-GADFFIGVSRGNILKPEWIKKMSRK-PVIFALANPV  297 (388)
T ss_dssp             ---T-TCSEEEECSCSSCSCHHHHTTSCSS-CEEEECCSSS
T ss_pred             ---c-cCCEEEEeCCCCccCHHHHHhcCCC-CEEEEcCCCC
Confidence               2 4799999988434456788888885 6665555443

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.47  E-value=0.036  Score=47.14  Aligned_cols=115  Identities=17%  Similarity=0.057  Sum_probs=66.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh-hHHHHH-HhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~-~~~~~~-~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      .+++|||+|+|.+|...+..+...|+ .|++++... +..+.+ ++.++. .+. .....+      .+  .++|+||-+
T Consensus        30 ~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~~l~~l~~~~~i~-~i~-~~~~~~------dL--~~adLVIaA   98 (223)
T 3dfz_A           30 KGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSAEINEWEAKGQLR-VKR-KKVGEE------DL--LNVFFIVVA   98 (223)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCHHHHHHHHTTSCE-EEC-SCCCGG------GS--SSCSEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCHHHHHHHHcCCcE-EEE-CCCCHh------Hh--CCCCEEEEC
Confidence            46899999999999999999999999 788886543 223333 332332 222 111100      01  279999999


Q ss_pred             cCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEe
Q 017336          266 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTF  315 (373)
Q Consensus       266 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~  315 (373)
                      ++.+ ..+..+...+.. |..+...+.....++.++...-...+.|--+.
T Consensus        99 T~d~-~~N~~I~~~ak~-gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST  146 (223)
T 3dfz_A           99 TNDQ-AVNKFVKQHIKN-DQLVNMASSFSDGNIQIPAQFSRGRLSLAIST  146 (223)
T ss_dssp             CCCT-HHHHHHHHHSCT-TCEEEC-----CCSEECCEEEEETTEEEEEEC
T ss_pred             CCCH-HHHHHHHHHHhC-CCEEEEeCCcccCeEEEeeEEEeCCEEEEEEC
Confidence            9984 555555555664 88877665543344444333222455554443

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.46  E-value=0.0098  Score=51.32  Aligned_cols=79  Identities=28%  Similarity=0.348  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-----cCCce-ee--cCCCCCccHHHHHHHHc--C
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTD-FV--NTSEHDRPIQEVIAEMT--N  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-----lg~~~-vi--~~~~~~~~~~~~~~~~~--~  256 (373)
                      .++++||+|+ |.+|...++.+...|+ +|++++++.++.+.+.+     .+... .+  |..+. ..+.+.+.+..  -
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   83 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSE-ESINKAFEEIYNLV   83 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCH-HHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCH-HHHHHHHHHHHHhc
Confidence            4678999987 8999999999988999 89999998876654432     34332 22  22221 11222222211  1


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|++.|.
T Consensus        84 ~~~d~vi~~Ag~   95 (248)
T 2pnf_A           84 DGIDILVNNAGI   95 (248)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999873

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=96.46  E-value=0.014  Score=49.80  Aligned_cols=76  Identities=16%  Similarity=0.184  Sum_probs=50.1

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCce-e--ecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-F--VNTSEHDRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~-v--i~~~~~~~~~~~~~~~~~~~~~d~vid  264 (373)
                      +++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+ ++... .  .|..+.  +-.+.+.+.....+|++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~--~~v~~~~~~~~~~~d~lv~   78 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLSNNVGYRARDLASH--QEVEQLFEQLDSIPSTVVH   78 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCSSCCCEEECCTTCH--HHHHHHHHSCSSCCSEEEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhccCeEeecCCCH--HHHHHHHHHHhhcCCEEEE
Confidence            46899987 8999999999999999 79999999888776644 43321 1  222221  1222232323334699999


Q ss_pred             ccCC
Q 017336          265 CTGN  268 (373)
Q Consensus       265 ~~g~  268 (373)
                      +.|.
T Consensus        79 ~Ag~   82 (230)
T 3guy_A           79 SAGS   82 (230)
T ss_dssp             CCCC
T ss_pred             eCCc
Confidence            9873

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=96.45  E-value=0.0074  Score=53.42  Aligned_cols=79  Identities=25%  Similarity=0.370  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCce-e--ecCCCCC--ccHHHHHHHHcCCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-F--VNTSEHD--RPIQEVIAEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~-v--i~~~~~~--~~~~~~~~~~~~~~~d  260 (373)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++++... .  .|..+.+  ..+.+.+.+.. +++|
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD  105 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAF-GGVD  105 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHH-SSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            4689999987 8999999999989999 899999988776654 3455432 2  2322211  01222232322 3799


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      +++++.|.
T Consensus       106 ~lvnnAg~  113 (277)
T 3gvc_A          106 KLVANAGV  113 (277)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.45  E-value=0.0089  Score=51.34  Aligned_cols=103  Identities=18%  Similarity=0.151  Sum_probs=69.1

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcC---
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN---  256 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~---  256 (373)
                      ...++++||-+|+| .|..++.+++.++ ..+|++++.+++..+.+++    .|...-+.....+  ..+.+..+..   
T Consensus        69 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d--~~~~l~~l~~~~~  145 (232)
T 3cbg_A           69 SLTGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGP--ALATLEQLTQGKP  145 (232)
T ss_dssp             HHHTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESC--HHHHHHHHHTSSS
T ss_pred             HhcCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHhcCC
Confidence            34567899999988 6888889998773 2389999999988877765    3543211111222  4444444432   


Q ss_pred             -CCccEEEEccCC---hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          257 -GGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       257 -~~~d~vid~~g~---~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                       +.||+||.....   ...++.+.+.|+++ |.++.-..
T Consensus       146 ~~~fD~V~~d~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  183 (232)
T 3cbg_A          146 LPEFDLIFIDADKRNYPRYYEIGLNLLRRG-GLMVIDNV  183 (232)
T ss_dssp             CCCEEEEEECSCGGGHHHHHHHHHHTEEEE-EEEEEECT
T ss_pred             CCCcCEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEeCC
Confidence             479999854332   25688899999997 99887544

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=96.44  E-value=0.011  Score=51.85  Aligned_cols=79  Identities=23%  Similarity=0.217  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-----cCCc-e-e--ecCCCCC--ccHHHHHHHHc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVT-D-F--VNTSEHD--RPIQEVIAEMT  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-----lg~~-~-v--i~~~~~~--~~~~~~~~~~~  255 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|++++++.++.+.+.+     .+.. . .  .|..+.+  ..+.+.+.+..
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL   85 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4689999987 8999999999999999 89999998877654422     3322 1 1  2322211  01222232322


Q ss_pred             CCCccEEEEccCC
Q 017336          256 NGGVDRSVECTGN  268 (373)
Q Consensus       256 ~~~~d~vid~~g~  268 (373)
                       +++|+++++.|.
T Consensus        86 -g~id~lvnnAg~   97 (265)
T 3lf2_A           86 -GCASILVNNAGQ   97 (265)
T ss_dssp             -CSCSEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             379999999884

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.44  E-value=0.011  Score=52.11  Aligned_cols=78  Identities=22%  Similarity=0.300  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHH---HHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVI---AEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~---~~~~~  256 (373)
                      .++++||+|+ |.+|.+++..+...|+ +|+++++++++.+.+    ++.+... .  .|..+.+ .+.+.+   .+.. 
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~-   97 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP-EIEALVAAVVERY-   97 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHT-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHH-HHHHHHHHHHHHh-
Confidence            4689999987 8999999999999999 899999988765443    2234332 1  2322211 122222   2222 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|++.|.
T Consensus        98 g~iD~lv~~Ag~  109 (277)
T 2rhc_B           98 GPVDVLVNNAGR  109 (277)
T ss_dssp             CSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999873

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=96.43  E-value=0.011  Score=51.39  Aligned_cols=78  Identities=26%  Similarity=0.343  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~  257 (373)
                      .+++|||+|+ |.+|...+..+...|+ +|+++++++++.+.+    ++.+... .  .|..+. ..+.+.+.+..  .+
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   89 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNT-ESVQNAVRSVHEQEG   89 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCH-HHHHHHHHHHHHHcC
Confidence            4689999987 8999999999988999 899999987665433    2334322 2  232221 11222222211  13


Q ss_pred             CccEEEEccC
Q 017336          258 GVDRSVECTG  267 (373)
Q Consensus       258 ~~d~vid~~g  267 (373)
                      ++|++|++.|
T Consensus        90 ~id~vi~~Ag   99 (260)
T 3awd_A           90 RVDILVACAG   99 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=96.43  E-value=0.0073  Score=55.64  Aligned_cols=134  Identities=18%  Similarity=0.138  Sum_probs=81.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          190 SSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      -+|.|+|+|.+|...+..++.. +++-+.++++++++.+.++++|+..   +.+    +.+.+.+   ..+|+|+.|+..
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~---~~~----~~~ll~~---~~~D~V~i~tp~   75 (359)
T 3e18_A            6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKI---YES----YEAVLAD---EKVDAVLIATPN   75 (359)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCB---CSC----HHHHHHC---TTCCEEEECSCG
T ss_pred             CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCce---eCC----HHHHhcC---CCCCEEEEcCCc
Confidence            4689999999998877777766 6633345588888888777787742   221    3333321   379999999998


Q ss_pred             hHhHHHHHHHhhcCCcEEEEEcCCCCCceeecc-chhhc--ccceEEEEeccCCCCCCCHHHHHHHHHcCCC
Q 017336          269 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  337 (373)
Q Consensus       269 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~--~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l  337 (373)
                      ..+.+.+..+|..  |+-+++..+.....-... .....  +++.+.-..  ..+....++.+.+++++|.+
T Consensus        76 ~~h~~~~~~al~a--GkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~k~~i~~g~i  143 (359)
T 3e18_A           76 DSHKELAISALEA--GKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQ--NRRWDEDFLIIKEMFEQKTI  143 (359)
T ss_dssp             GGHHHHHHHHHHT--TCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEEC--GGGGCHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHC--CCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEe--eeccCHHHHHHHHHHHcCCC
Confidence            8888899999997  455556443211100000 01111  333332222  22333357778888888865

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.42  E-value=0.0086  Score=52.32  Aligned_cols=78  Identities=29%  Similarity=0.410  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCce-e--ecCCCCCccHHHHHH---HHcCCCc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-F--VNTSEHDRPIQEVIA---EMTNGGV  259 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~-v--i~~~~~~~~~~~~~~---~~~~~~~  259 (373)
                      .++++||+|+ |.+|...++.+...|+ +|++++++.++.+.+ ++++... +  .|..+. ..+.+.+.   +.. +++
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~-g~i   87 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSE-KDVQTALALAKGKF-GRV   87 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTTEEEEECCTTCH-HHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCH-HHHHHHHHHHHHHC-CCC
Confidence            4689999987 8999999999999999 899998887655443 4455432 2  232221 11222222   222 379


Q ss_pred             cEEEEccCC
Q 017336          260 DRSVECTGN  268 (373)
Q Consensus       260 d~vid~~g~  268 (373)
                      |++|++.|.
T Consensus        88 d~li~~Ag~   96 (265)
T 2o23_A           88 DVAVNCAGI   96 (265)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999999873

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.42  E-value=0.0075  Score=52.62  Aligned_cols=79  Identities=22%  Similarity=0.347  Sum_probs=46.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCce-e--ecCCCCC--ccHHHHHHHHcCCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-F--VNTSEHD--RPIQEVIAEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~-v--i~~~~~~--~~~~~~~~~~~~~~~d  260 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++... .  .|..+.+  ..+.+.+.+.. +++|
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   83 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEF-GHVH   83 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            4689999987 8999999999999999 899998887665443 3444322 2  2222211  01222222222 3799


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      ++|++.|.
T Consensus        84 ~lv~nAg~   91 (257)
T 3tpc_A           84 GLVNCAGT   91 (257)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=96.41  E-value=0.016  Score=48.25  Aligned_cols=97  Identities=19%  Similarity=0.204  Sum_probs=59.5

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      ++|||+|+ |.+|...++.+...|. +|+++++++++.+.....++.. +..+-.+  . +.+.+... ++|+||++.+.
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~D~~~--~-~~~~~~~~-~~d~vi~~a~~   77 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHV-VVGDVLQ--A-ADVDKTVA-GQDAVIVLLGT   77 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSEE-EESCTTS--H-HHHHHHHT-TCSEEEECCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhcccccCCceEE-EEecCCC--H-HHHHHHHc-CCCEEEECccC
Confidence            68999998 9999999999988898 8999989876643221122222 2111111  1 23434333 58999999885


Q ss_pred             hH----------hHHHHHHHhhc-CCcEEEEEcCC
Q 017336          269 ID----------NMISAFECVHD-GWGVAVLVGVP  292 (373)
Q Consensus       269 ~~----------~~~~~~~~l~~-~~g~~v~~g~~  292 (373)
                      ..          .....++.+.. +.++++.++..
T Consensus        78 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~  112 (206)
T 1hdo_A           78 RNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (206)
T ss_dssp             TTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             CCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence            32          12333344433 22588888764

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.41  E-value=0.016  Score=50.28  Aligned_cols=79  Identities=25%  Similarity=0.288  Sum_probs=52.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-ee--cCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~-vi--~~~~~~--~~~~~~~~~~~~~  257 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+    .+... .+  |..+.+  ..+.+.+.+.. +
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   85 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF-G   85 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            4789999987 8999999999999999 89999998877655432    24322 22  222211  01222232332 3


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus        86 ~id~li~~Ag~   96 (253)
T 3qiv_A           86 GIDYLVNNAAI   96 (253)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.41  E-value=0.0047  Score=53.58  Aligned_cols=75  Identities=24%  Similarity=0.301  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh--hHHHHHHhcCCcee---ecCCCCCccHHHHHHHH-cCCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRFEEAKKFGVTDF---VNTSEHDRPIQEVIAEM-TNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~--~~~~~~~~lg~~~v---i~~~~~~~~~~~~~~~~-~~~~~d  260 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|++++++.  +..+.+++.|....   .|..+..  -   +++. ..+++|
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~--~---v~~~~~~g~iD   81 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKDGGNASALLIDFADPL--A---AKDSFTDAGFD   81 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTT--T---TTTSSTTTCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHH--H---HHHHHHhCCCC
Confidence            4789999987 8999999999999999 888888864  45566677776442   2332221  1   1111 124899


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      +++++.|.
T Consensus        82 iLVNNAGi   89 (247)
T 4hp8_A           82 ILVNNAGI   89 (247)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.40  E-value=0.013  Score=51.56  Aligned_cols=70  Identities=17%  Similarity=0.166  Sum_probs=51.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCC--ceeecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV--TDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~--~~vi~~~~~~~~~~~~~~~~~~~~~d~vid  264 (373)
                      .+++++|+|+|++|.+++..+...|+.+|+++.|+.++.+.+ ++++.  -.++..++        +   ....+|+||+
T Consensus       119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~--------l---~~~~~DivIn  187 (272)
T 3pwz_A          119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEA--------L---EGQSFDIVVN  187 (272)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG--------G---TTCCCSEEEE
T ss_pred             cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH--------h---cccCCCEEEE
Confidence            578999999999999999999999977899999998876654 44543  12222211        1   1137999999


Q ss_pred             ccCC
Q 017336          265 CTGN  268 (373)
Q Consensus       265 ~~g~  268 (373)
                      +++.
T Consensus       188 aTp~  191 (272)
T 3pwz_A          188 ATSA  191 (272)
T ss_dssp             CSSG
T ss_pred             CCCC
Confidence            9875

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.40  E-value=0.0068  Score=53.51  Aligned_cols=74  Identities=18%  Similarity=0.172  Sum_probs=51.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHH-HHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~-~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      ++++++|+|+|++|.++++.+...|+ +|++++++.++.+. +++++...-++..+    + +.+.+   +++|++++++
T Consensus       118 ~~k~vlViGaGg~g~a~a~~L~~~G~-~V~v~~R~~~~~~~la~~~~~~~~~~~~~----~-~~~~~---~~~DivVn~t  188 (271)
T 1nyt_A          118 PGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALS----M-DELEG---HEFDLIINAT  188 (271)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECC----S-GGGTT---CCCSEEEECC
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHhhccCCeeEec----H-HHhcc---CCCCEEEECC
Confidence            57899999999999999999999997 89999999887654 44554311011111    1 01111   4799999999


Q ss_pred             CChH
Q 017336          267 GNID  270 (373)
Q Consensus       267 g~~~  270 (373)
                      +...
T Consensus       189 ~~~~  192 (271)
T 1nyt_A          189 SSGI  192 (271)
T ss_dssp             SCGG
T ss_pred             CCCC
Confidence            8743

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=96.39  E-value=0.0092  Score=52.10  Aligned_cols=78  Identities=19%  Similarity=0.268  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHH---HHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIA---EMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~---~~~~  256 (373)
                      .++++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+    ++.+... .  .|..+. .++.+.+.   +.. 
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~-   89 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKA-EDRERLVAMAVNLH-   89 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHHc-
Confidence            4689999987 8999999999999999 899999987765433    2234332 1  222221 11222222   222 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|++.|.
T Consensus        90 g~iD~lv~~Ag~  101 (260)
T 2zat_A           90 GGVDILVSNAAV  101 (260)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999873

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.39  E-value=0.034  Score=50.26  Aligned_cols=89  Identities=17%  Similarity=0.191  Sum_probs=62.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      ..+|.|+|.|.+|...++.+...|. .|++.++++++.+.+.+.|+...-+       ..+.+     ...|+||.|+..
T Consensus        31 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~~~-------~~e~~-----~~aDvVi~~vp~   97 (320)
T 4dll_A           31 ARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAALGATIHEQ-------ARAAA-----RDADIVVSMLEN   97 (320)
T ss_dssp             CSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCEEESS-------HHHHH-----TTCSEEEECCSS
T ss_pred             CCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCCEeeCC-------HHHHH-----hcCCEEEEECCC
Confidence            4589999999999999999989998 8999999999998888877642211       22222     147888888886


Q ss_pred             hHhHHHHH------HHhhcCCcEEEEEcC
Q 017336          269 IDNMISAF------ECVHDGWGVAVLVGV  291 (373)
Q Consensus       269 ~~~~~~~~------~~l~~~~g~~v~~g~  291 (373)
                      +..+...+      ..+.++ ..++.++.
T Consensus        98 ~~~~~~v~~~~~~~~~l~~~-~~vi~~st  125 (320)
T 4dll_A           98 GAVVQDVLFAQGVAAAMKPG-SLFLDMAS  125 (320)
T ss_dssp             HHHHHHHHTTTCHHHHCCTT-CEEEECSC
T ss_pred             HHHHHHHHcchhHHhhCCCC-CEEEecCC
Confidence            54444443      245554 55555544

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=96.36  E-value=0.013  Score=52.30  Aligned_cols=79  Identities=18%  Similarity=0.254  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce--e--ecCCCC-C--ccHHHHHHHHc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD--F--VNTSEH-D--RPIQEVIAEMT  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~--v--i~~~~~-~--~~~~~~~~~~~  255 (373)
                      .++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+    ++.+...  +  .|..+. +  ..+.+.+.+..
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            5789999997 8999999999888999 899999998765443    2223211  1  233332 1  11222233322


Q ss_pred             CCCccEEEEccCC
Q 017336          256 NGGVDRSVECTGN  268 (373)
Q Consensus       256 ~~~~d~vid~~g~  268 (373)
                       +++|++|++.|.
T Consensus        90 -g~iD~lv~nAg~  101 (311)
T 3o26_A           90 -GKLDILVNNAGV  101 (311)
T ss_dssp             -SSCCEEEECCCC
T ss_pred             -CCCCEEEECCcc
Confidence             379999999984

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.36  E-value=0.033  Score=49.59  Aligned_cols=86  Identities=19%  Similarity=0.253  Sum_probs=61.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  270 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  270 (373)
                      +|.|+|+|.+|...+..+...|. +|+++++++++.+.+++.|...   ..  +  ..+.+.     ..|+||.|+..+.
T Consensus         7 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~~--~--~~~~~~-----~~D~vi~~v~~~~   73 (299)
T 1vpd_A            7 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAET---AS--T--AKAIAE-----QCDVIITMLPNSP   73 (299)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---CS--S--HHHHHH-----HCSEEEECCSSHH
T ss_pred             eEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCee---cC--C--HHHHHh-----CCCEEEEECCCHH
Confidence            79999999999998888888898 7999999999888887776532   11  1  323222     4799999998655


Q ss_pred             hHHHHH-------HHhhcCCcEEEEEc
Q 017336          271 NMISAF-------ECVHDGWGVAVLVG  290 (373)
Q Consensus       271 ~~~~~~-------~~l~~~~g~~v~~g  290 (373)
                      .+...+       ..+.++ ..++.++
T Consensus        74 ~~~~~~~~~~~l~~~l~~~-~~vv~~s   99 (299)
T 1vpd_A           74 HVKEVALGENGIIEGAKPG-TVLIDMS   99 (299)
T ss_dssp             HHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred             HHHHHHhCcchHhhcCCCC-CEEEECC
Confidence            555444       456664 5665554

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.36  E-value=0.025  Score=49.95  Aligned_cols=34  Identities=29%  Similarity=0.317  Sum_probs=30.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~   43 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGA-DIAICDRC   43 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCC
Confidence            4789999987 8999999999999999 79998886

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.36  E-value=0.013  Score=49.32  Aligned_cols=97  Identities=19%  Similarity=0.158  Sum_probs=68.7

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee--ecCCCCCccHHHHHHHHcCCCccE
Q 017336          184 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF--VNTSEHDRPIQEVIAEMTNGGVDR  261 (373)
Q Consensus       184 ~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v--i~~~~~~~~~~~~~~~~~~~~~d~  261 (373)
                      ..+.++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++.+...+  +..+-.+      +  ...+.+|+
T Consensus        42 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~------~--~~~~~~D~  110 (218)
T 3ou2_A           42 RAGNIRGDVLELASGT-GYWTRHLSGL-AD-RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFD------W--TPDRQWDA  110 (218)
T ss_dssp             TTTTSCSEEEEESCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHGGGCCTTEEEEECCTTS------C--CCSSCEEE
T ss_pred             hcCCCCCeEEEECCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHhcCCCCeEEEeccccc------C--CCCCceeE
Confidence            3477888999999875 7777777777 77 89999999999999988664332  2111111      1  12348999


Q ss_pred             EEEccCC--------hHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          262 SVECTGN--------IDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       262 vid~~g~--------~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      |+....-        ...+..+.+.|+++ |++++....
T Consensus       111 v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~  148 (218)
T 3ou2_A          111 VFFAHWLAHVPDDRFEAFWESVRSAVAPG-GVVEFVDVT  148 (218)
T ss_dssp             EEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEEC
T ss_pred             EEEechhhcCCHHHHHHHHHHHHHHcCCC-eEEEEEeCC
Confidence            9975431        35678889999997 999887554

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.36  E-value=0.012  Score=51.62  Aligned_cols=79  Identities=22%  Similarity=0.337  Sum_probs=52.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCcee---ecCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDF---VNTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~v---i~~~~~~--~~~~~~~~~~~~~  257 (373)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.    +.+....   .|..+.+  ..+.+.+.+.. +
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g   80 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW-G   80 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            4688999987 8999999999999999 8999999887765543    2344321   2322211  01222222222 3


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|+++++.|.
T Consensus        81 ~iD~lVnnAG~   91 (264)
T 3tfo_A           81 RIDVLVNNAGV   91 (264)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=96.35  E-value=0.013  Score=51.07  Aligned_cols=76  Identities=21%  Similarity=0.226  Sum_probs=50.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-e--ecCCCCCccHHHHHH---HHcCC
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIA---EMTNG  257 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-v--i~~~~~~~~~~~~~~---~~~~~  257 (373)
                      ++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+.    +.+... .  .|..+.+ .+.+.+.   +.. +
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~-g   78 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRD-QVFAAVEQARKTL-G   78 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHH-HHHHHHHHHHHHT-T
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHH-HHHHHHHHHHHHh-C
Confidence            578999987 8999999999999999 8999999887655432    234322 2  2322211 1222222   222 3


Q ss_pred             CccEEEEccC
Q 017336          258 GVDRSVECTG  267 (373)
Q Consensus       258 ~~d~vid~~g  267 (373)
                      ++|++|++.|
T Consensus        79 ~id~lv~nAg   88 (256)
T 1geg_A           79 GFDVIVNNAG   88 (256)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=96.34  E-value=0.014  Score=50.73  Aligned_cols=81  Identities=16%  Similarity=0.227  Sum_probs=49.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh--hHHHHHHhc--CCce-e--ecCCCCCccHHHHHHHHcC--C
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRFEEAKKF--GVTD-F--VNTSEHDRPIQEVIAEMTN--G  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~--~~~~~~~~l--g~~~-v--i~~~~~~~~~~~~~~~~~~--~  257 (373)
                      .++++||+|+ |++|.++++.+...|+++|+++++++  +..+.+++.  +... +  .|..+....+.+.+.+...  +
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            4688999987 89999999999999995488887765  334444433  2221 1  2333220123232322211  3


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus        84 ~id~lv~~Ag~   94 (254)
T 1sby_A           84 TVDILINGAGI   94 (254)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999873

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=96.34  E-value=0.011  Score=51.69  Aligned_cols=78  Identities=29%  Similarity=0.275  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE-cCChhHHHHHH----hcCCce-ee--cCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEAK----KFGVTD-FV--NTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~-~~~~~~~~~~~----~lg~~~-vi--~~~~~~--~~~~~~~~~~~~  256 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++ .+++++.+.+.    +.+... .+  |..+.+  ..+.+.+.+.. 
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   80 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF-   80 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            5789999987 8999999999999999 67775 78776655432    334432 22  222211  01222222322 


Q ss_pred             CCccEEEEccC
Q 017336          257 GGVDRSVECTG  267 (373)
Q Consensus       257 ~~~d~vid~~g  267 (373)
                      +++|++|++.|
T Consensus        81 g~id~lv~nAg   91 (258)
T 3oid_A           81 GRLDVFVNNAA   91 (258)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999987

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=96.33  E-value=0.011  Score=51.59  Aligned_cols=80  Identities=23%  Similarity=0.243  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~--~~~~~~~~~~~~~  257 (373)
                      .+++|||+|+ |.+|...++.+...|+ +|+++++++++.+.+    ++.+... +  .|..+.+  ..+.+.+.+..++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   91 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   91 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4688999987 8999999999999999 899998987765543    2234322 1  2222211  0122222233325


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus        92 ~id~li~~Ag~  102 (266)
T 1xq1_A           92 KLDILINNLGA  102 (266)
T ss_dssp             CCSEEEEECCC
T ss_pred             CCcEEEECCCC
Confidence            79999999874

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.33  E-value=0.033  Score=50.08  Aligned_cols=74  Identities=19%  Similarity=0.240  Sum_probs=55.0

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      .+|.|+|.|.+|...++.+...|. .|++.++++++.+.+.+.|+...   .+    ..+.+.     ..|+||-|+..+
T Consensus        22 ~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~---~~----~~~~~~-----~aDvvi~~vp~~   88 (310)
T 3doj_A           22 MEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEHGASVC---ES----PAEVIK-----KCKYTIAMLSDP   88 (310)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC---SS----HHHHHH-----HCSEEEECCSSH
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCeEc---CC----HHHHHH-----hCCEEEEEcCCH
Confidence            579999999999999999999998 89999999999988888876421   11    323232     368888888765


Q ss_pred             HhHHHHH
Q 017336          270 DNMISAF  276 (373)
Q Consensus       270 ~~~~~~~  276 (373)
                      ..+...+
T Consensus        89 ~~~~~v~   95 (310)
T 3doj_A           89 CAALSVV   95 (310)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            4444444

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=96.32  E-value=0.008  Score=53.16  Aligned_cols=78  Identities=26%  Similarity=0.336  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCce-e--ecCCCCCccHHHHHH---HHcCCCc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-F--VNTSEHDRPIQEVIA---EMTNGGV  259 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~~-v--i~~~~~~~~~~~~~~---~~~~~~~  259 (373)
                      .++++||+|+ |.+|.++++.+...|+ +|++++++.++.+.+. +++... .  .|..+.+ .+.+.+.   +.. +++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~-g~i   80 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTDGE-RIDVVAADVLARY-GRV   80 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHH-HHHHHHHHHHHHH-SCC
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHH-HHHHHHHHHHHhC-CCC
Confidence            4688999987 8999999999999999 8999999887765553 344322 2  2322211 1222222   222 379


Q ss_pred             cEEEEccCC
Q 017336          260 DRSVECTGN  268 (373)
Q Consensus       260 d~vid~~g~  268 (373)
                      |++|++.|.
T Consensus        81 d~lv~~Ag~   89 (281)
T 3m1a_A           81 DVLVNNAGR   89 (281)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999884

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.32  E-value=0.032  Score=50.33  Aligned_cols=91  Identities=15%  Similarity=0.135  Sum_probs=63.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCc-EEEEEcCChhHHHHHHhcCCc-eeecCCCCCccHHHHHHH-HcCCCccEEEEcc
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAE-MTNGGVDRSVECT  266 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~-~V~~~~~~~~~~~~~~~lg~~-~vi~~~~~~~~~~~~~~~-~~~~~~d~vid~~  266 (373)
                      .+|.|+|.|.+|...++.++..|.. +|++.++++++.+.++++|.. ....  +..        + .. ...|+||.|+
T Consensus        34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~--~~~--------~~~~-~~aDvVilav  102 (314)
T 3ggo_A           34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTT--SIA--------KVED-FSPDFVMLSS  102 (314)
T ss_dssp             SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEES--CTT--------GGGG-GCCSEEEECS
T ss_pred             CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcC--CHH--------HHhh-ccCCEEEEeC
Confidence            6899999999999999999988864 799999999999999988873 2221  110        1 11 2589999998


Q ss_pred             CChH---hHHHHHHHhhcCCcEEEEEcCC
Q 017336          267 GNID---NMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       267 g~~~---~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ....   .+......++++ ..++.++..
T Consensus       103 p~~~~~~vl~~l~~~l~~~-~iv~d~~Sv  130 (314)
T 3ggo_A          103 PVRTFREIAKKLSYILSED-ATVTDQGSV  130 (314)
T ss_dssp             CGGGHHHHHHHHHHHSCTT-CEEEECCSC
T ss_pred             CHHHHHHHHHHHhhccCCC-cEEEECCCC
Confidence            7642   233444455664 566655543

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.31  E-value=0.022  Score=51.32  Aligned_cols=89  Identities=18%  Similarity=0.258  Sum_probs=66.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      -.+++|.|+|.|.+|...++.++.+|+ +|++.+++.++. .++++|+...      +  +.+.+.     ..|+|+.++
T Consensus       140 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~~------~--l~ell~-----~aDvVvl~~  204 (313)
T 2ekl_A          140 LAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIRE-KAEKINAKAV------S--LEELLK-----NSDVISLHV  204 (313)
T ss_dssp             CTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHH-HHHHTTCEEC------C--HHHHHH-----HCSEEEECC
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchh-HHHhcCceec------C--HHHHHh-----hCCEEEEec
Confidence            367899999999999999999999999 899999887664 4667776521      1  333232     479999998


Q ss_pred             CChH----hH-HHHHHHhhcCCcEEEEEcC
Q 017336          267 GNID----NM-ISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       267 g~~~----~~-~~~~~~l~~~~g~~v~~g~  291 (373)
                      ....    .+ ...+..|+++ +.++.++.
T Consensus       205 P~~~~t~~li~~~~l~~mk~g-a~lIn~ar  233 (313)
T 2ekl_A          205 TVSKDAKPIIDYPQFELMKDN-VIIVNTSR  233 (313)
T ss_dssp             CCCTTSCCSBCHHHHHHSCTT-EEEEESSC
T ss_pred             cCChHHHHhhCHHHHhcCCCC-CEEEECCC
Confidence            7432    22 4667889986 88887765

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=96.31  E-value=0.02  Score=54.60  Aligned_cols=94  Identities=11%  Similarity=0.056  Sum_probs=60.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHh-cCCce-eecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKK-FGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~~~~-lg~~~-vi~~~~~~~~~~~~~~~~~~~~~d~vid  264 (373)
                      .+++|+|+|+|.+|.+++..+... +. +|++++++.++.+.+.+ .+... .++..+    . +.+.+... ++|+||+
T Consensus        22 ~~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~~~~~D~~d----~-~~l~~~l~-~~DvVIn   94 (467)
T 2axq_A           22 MGKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSKAISLDVTD----D-SALDKVLA-DNDVVIS   94 (467)
T ss_dssp             -CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCEEEECCTTC----H-HHHHHHHH-TSSEEEE
T ss_pred             CCCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCcEEEEecCC----H-HHHHHHHc-CCCEEEE
Confidence            356899999999999998888877 66 79999999888766544 34332 223222    2 12323222 6899999


Q ss_pred             ccCChHhHHHHHHHhhcCCcEEEEE
Q 017336          265 CTGNIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       265 ~~g~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      |++..........++..+ -.++..
T Consensus        95 ~tp~~~~~~v~~a~l~~g-~~vvd~  118 (467)
T 2axq_A           95 LIPYTFHPNVVKSAIRTK-TDVVTS  118 (467)
T ss_dssp             CSCGGGHHHHHHHHHHHT-CEEEEC
T ss_pred             CCchhhhHHHHHHHHhcC-CEEEEe
Confidence            998643334455667764 555443

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.31  E-value=0.017  Score=52.06  Aligned_cols=75  Identities=17%  Similarity=0.190  Sum_probs=51.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC---hhHHHHHH-h----cCCc-eeecCCCCCccHHHHHHHHcCCC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS---SKRFEEAK-K----FGVT-DFVNTSEHDRPIQEVIAEMTNGG  258 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~---~~~~~~~~-~----lg~~-~vi~~~~~~~~~~~~~~~~~~~~  258 (373)
                      .++++||+|+|++|.+++..+...|+++|+++.|+   .++.+.+. +    ++.. .+++.++    + +.+.+... .
T Consensus       153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~----~-~~l~~~l~-~  226 (315)
T 3tnl_A          153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIED----H-EQLRKEIA-E  226 (315)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC----H-HHHHHHHH-T
T ss_pred             cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccch----H-HHHHhhhc-C
Confidence            67899999999999999999999999889999998   66655442 2    2322 2333332    1 12222221 5


Q ss_pred             ccEEEEccCC
Q 017336          259 VDRSVECTGN  268 (373)
Q Consensus       259 ~d~vid~~g~  268 (373)
                      +|+||++++.
T Consensus       227 aDiIINaTp~  236 (315)
T 3tnl_A          227 SVIFTNATGV  236 (315)
T ss_dssp             CSEEEECSST
T ss_pred             CCEEEECccC
Confidence            8999999864

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.31  E-value=0.0036  Score=51.56  Aligned_cols=100  Identities=12%  Similarity=0.160  Sum_probs=66.0

Q ss_pred             ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce--eecCCCCCccHHHHHHHHcC
Q 017336          183 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD--FVNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       183 ~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~--vi~~~~~~~~~~~~~~~~~~  256 (373)
                      ...++++++||=+|+|. |..++.+++. +. +|++++.+++..+.+++    .+.+.  ++. ..    . +.+.....
T Consensus        17 ~~~~~~~~~vLDiGcG~-G~~~~~la~~-~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~~----~-~~l~~~~~   87 (185)
T 3mti_A           17 AEVLDDESIVVDATMGN-GNDTAFLAGL-SK-KVYAFDVQEQALGKTSQRLSDLGIENTELIL-DG----H-ENLDHYVR   87 (185)
T ss_dssp             HTTCCTTCEEEESCCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-SC----G-GGGGGTCC
T ss_pred             HHhCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-Cc----H-HHHHhhcc
Confidence            35678899999999875 7778888877 66 89999999988777754    34432  222 11    1 11112233


Q ss_pred             CCccEEEEccCC-----------h----HhHHHHHHHhhcCCcEEEEEcCC
Q 017336          257 GGVDRSVECTGN-----------I----DNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       257 ~~~d~vid~~g~-----------~----~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      +.||+|+...+.           +    ..+..+.+.|+|+ |+++++...
T Consensus        88 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~~  137 (185)
T 3mti_A           88 EPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVG-GRLAIMIYY  137 (185)
T ss_dssp             SCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEE-EEEEEEEC-
T ss_pred             CCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCC-cEEEEEEeC
Confidence            479999865321           1    3457888999997 999877543

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=96.30  E-value=0.0081  Score=51.96  Aligned_cols=75  Identities=12%  Similarity=0.047  Sum_probs=50.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE-c--CChhHHHHHH-hc-CCceeecCCCCCccHHHHHHHHcCCCccEE
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-D--RSSKRFEEAK-KF-GVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  262 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~-~--~~~~~~~~~~-~l-g~~~vi~~~~~~~~~~~~~~~~~~~~~d~v  262 (373)
                      ++++||+|+ |++|.+.++.+...|+ +|+++ +  +++++.+.+. ++ +.+ +.+.++- ..+.+.+.+.. +++|++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~v-~~~~~~~~~~~-g~iD~l   76 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENPGTI-ALAEQKP-ERLVDATLQHG-EAIDTI   76 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHSTTEE-ECCCCCG-GGHHHHHGGGS-SCEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhCCCc-ccCHHHH-HHHHHHHHHHc-CCCCEE
Confidence            468999987 8999999999999999 89998 6  8877766543 34 332 3332221 12333333332 379999


Q ss_pred             EEccC
Q 017336          263 VECTG  267 (373)
Q Consensus       263 id~~g  267 (373)
                      |++.|
T Consensus        77 v~~Ag   81 (244)
T 1zmo_A           77 VSNDY   81 (244)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.29  E-value=0.016  Score=53.14  Aligned_cols=79  Identities=24%  Similarity=0.314  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH-----------HHHHHhcCCcee---ecCCCCC--ccHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-----------FEEAKKFGVTDF---VNTSEHD--RPIQEV  250 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~-----------~~~~~~lg~~~v---i~~~~~~--~~~~~~  250 (373)
                      .++++||+|+ +++|.+++..+...|+ +|+.+++++++           .+.+++.|....   .|..+.+  ..+.+.
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            5789999987 8999999999989999 88888887653           333444554332   2332221  112222


Q ss_pred             HHHHcCCCccEEEEccCC
Q 017336          251 IAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       251 ~~~~~~~~~d~vid~~g~  268 (373)
                      +.+.. +++|++|++.|.
T Consensus       123 ~~~~~-g~iDilVnnAG~  139 (346)
T 3kvo_A          123 AIKKF-GGIDILVNNASA  139 (346)
T ss_dssp             HHHHH-SCCCEEEECCCC
T ss_pred             HHHHc-CCCCEEEECCCC
Confidence            32322 379999999884

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.29  E-value=0.013  Score=51.87  Aligned_cols=78  Identities=22%  Similarity=0.338  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c---CCcee-e--cCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F---GVTDF-V--NTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-l---g~~~v-i--~~~~~~--~~~~~~~~~~~~~  257 (373)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.+ +   +.... +  |..+.+  ..+.+.+.+.. +
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   84 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF-G   84 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-C
Confidence            4789999987 8999999999999999 89999999877655432 2   33222 1  222211  01222222222 3


Q ss_pred             CccEEEEccC
Q 017336          258 GVDRSVECTG  267 (373)
Q Consensus       258 ~~d~vid~~g  267 (373)
                      ++|++|++.|
T Consensus        85 ~iD~lvnnAg   94 (280)
T 3tox_A           85 GLDTAFNNAG   94 (280)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.29  E-value=0.016  Score=51.15  Aligned_cols=76  Identities=20%  Similarity=0.307  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCce-e--ecCCCCCccHHHHHHHHcC-CCccE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-F--VNTSEHDRPIQEVIAEMTN-GGVDR  261 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~~-v--i~~~~~~~~~~~~~~~~~~-~~~d~  261 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. +++... +  .|..+. ..+.+.+.+... ++.|+
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~~id~  106 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTSE-DSVLAAIEAANQLGRLRY  106 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCH-HHHHHHHHHHTTSSEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCCH-HHHHHHHHHHHHhCCCCe
Confidence            4688999987 8999999999989999 8999999988766553 455432 2  232221 123333333311 27899


Q ss_pred             EEEc
Q 017336          262 SVEC  265 (373)
Q Consensus       262 vid~  265 (373)
                      ++.+
T Consensus       107 lv~~  110 (281)
T 3ppi_A          107 AVVA  110 (281)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            9988

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=96.29  E-value=0.058  Score=42.79  Aligned_cols=95  Identities=8%  Similarity=0.078  Sum_probs=59.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC-hhHHHHHHh---cCCceeecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS-SKRFEEAKK---FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~-~~~~~~~~~---lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid  264 (373)
                      .++|+|+|+|.+|...++.+...|. .|++++++ +++.+.+++   .|...+. -+..+   .+.+.+..-.++|+|+-
T Consensus         3 ~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~~~i~-gd~~~---~~~l~~a~i~~ad~vi~   77 (153)
T 1id1_A            3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVIP-GDSND---SSVLKKAGIDRCRAILA   77 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEEE-SCTTS---HHHHHHHTTTTCSEEEE
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCCeEEE-cCCCC---HHHHHHcChhhCCEEEE
Confidence            4679999999999999999999998 79999886 465555442   2443332 22222   12344432237999999


Q ss_pred             ccCChHh---HHHHHHHhhcCCcEEEEE
Q 017336          265 CTGNIDN---MISAFECVHDGWGVAVLV  289 (373)
Q Consensus       265 ~~g~~~~---~~~~~~~l~~~~g~~v~~  289 (373)
                      +++..+.   .....+.+.+. .+++..
T Consensus        78 ~~~~d~~n~~~~~~a~~~~~~-~~ii~~  104 (153)
T 1id1_A           78 LSDNDADNAFVVLSAKDMSSD-VKTVLA  104 (153)
T ss_dssp             CSSCHHHHHHHHHHHHHHTSS-SCEEEE
T ss_pred             ecCChHHHHHHHHHHHHHCCC-CEEEEE
Confidence            9987432   22334444443 455543

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.29  E-value=0.0052  Score=56.32  Aligned_cols=91  Identities=19%  Similarity=0.143  Sum_probs=67.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .|++|.|+|.|.+|...++.++.+|+ +|++.+++..+.+.++++|+..+     .+  +.    ++.. ..|+|+.++.
T Consensus       163 ~gktvGIIG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-----~~--l~----ell~-~aDvV~l~~P  229 (351)
T 3jtm_A          163 EGKTIGTVGAGRIGKLLLQRLKPFGC-NLLYHDRLQMAPELEKETGAKFV-----ED--LN----EMLP-KCDVIVINMP  229 (351)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCC-EEEEECSSCCCHHHHHHHCCEEC-----SC--HH----HHGG-GCSEEEECSC
T ss_pred             cCCEEeEEEeCHHHHHHHHHHHHCCC-EEEEeCCCccCHHHHHhCCCeEc-----CC--HH----HHHh-cCCEEEECCC
Confidence            57899999999999999999999999 89999988766677777776532     11  22    2222 4799998876


Q ss_pred             Ch----Hh-HHHHHHHhhcCCcEEEEEcCC
Q 017336          268 NI----DN-MISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       268 ~~----~~-~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ..    .. -...+..|+++ ..++.++..
T Consensus       230 lt~~t~~li~~~~l~~mk~g-ailIN~aRG  258 (351)
T 3jtm_A          230 LTEKTRGMFNKELIGKLKKG-VLIVNNARG  258 (351)
T ss_dssp             CCTTTTTCBSHHHHHHSCTT-EEEEECSCG
T ss_pred             CCHHHHHhhcHHHHhcCCCC-CEEEECcCc
Confidence            32    12 25677888886 888877653

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.28  E-value=0.0095  Score=52.86  Aligned_cols=41  Identities=24%  Similarity=0.348  Sum_probs=35.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA  229 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~  229 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~   68 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKV   68 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            3688999998 8999999999989999 899999998776554

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.28  E-value=0.012  Score=52.58  Aligned_cols=79  Identities=22%  Similarity=0.260  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-h---cCCce--ee--cCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K---FGVTD--FV--NTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~---lg~~~--vi--~~~~~~--~~~~~~~~~~~~  256 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +   .+...  .+  |..+.+  ..+.+.+.+.. 
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  117 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF-  117 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc-
Confidence            4689999987 8999999999999999 8999999877655432 2   33111  22  222211  01222233322 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|++.|.
T Consensus       118 g~iD~lvnnAg~  129 (293)
T 3rih_A          118 GALDVVCANAGI  129 (293)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999873

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=96.28  E-value=0.015  Score=51.27  Aligned_cols=77  Identities=32%  Similarity=0.415  Sum_probs=48.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-ee--cCCCCCccHHHHHHH---HcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAE---MTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-vi--~~~~~~~~~~~~~~~---~~~  256 (373)
                      .++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+    ++.+... .+  |..+. ..+.+.+.+   .. 
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~-  109 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDP-KSVEETISQQEKDF-  109 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCH-HHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCH-HHHHHHHHHHHHHh-
Confidence            4688999987 8999999988888899 798888876544333    2234332 22  32221 112222222   22 


Q ss_pred             CCccEEEEccC
Q 017336          257 GGVDRSVECTG  267 (373)
Q Consensus       257 ~~~d~vid~~g  267 (373)
                      +++|++|++.|
T Consensus       110 g~id~li~~Ag  120 (279)
T 3ctm_A          110 GTIDVFVANAG  120 (279)
T ss_dssp             SCCSEEEECGG
T ss_pred             CCCCEEEECCc
Confidence            36999999877

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.28  E-value=0.029  Score=50.09  Aligned_cols=78  Identities=19%  Similarity=0.242  Sum_probs=49.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCC------------hhHHHH----HHhcCCcee---ecCCCCC--c
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS------------SKRFEE----AKKFGVTDF---VNTSEHD--R  245 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~------------~~~~~~----~~~lg~~~v---i~~~~~~--~  245 (373)
                      .++++||+|+ +++|.++++.+...|+ +|++++++            .++.+.    +++.+....   .|..+.+  .
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            4789999987 8999999999999999 88888776            333332    334454332   2322211  0


Q ss_pred             cHHHHHHHHcCCCccEEEEccC
Q 017336          246 PIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       246 ~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .+.+.+.+.. +++|++|++.|
T Consensus       106 ~~~~~~~~~~-g~iD~lv~nAg  126 (299)
T 3t7c_A          106 AAVDDGVTQL-GRLDIVLANAA  126 (299)
T ss_dssp             HHHHHHHHHH-SCCCEEEECCC
T ss_pred             HHHHHHHHHh-CCCCEEEECCC
Confidence            1222222222 37999999887

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=96.28  E-value=0.021  Score=50.39  Aligned_cols=34  Identities=32%  Similarity=0.329  Sum_probs=30.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      .++++||+|+ |++|.+++..+...|+ +|++++++
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~   46 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLC   46 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecc
Confidence            5789999987 8999999999999999 89988876

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=96.27  E-value=0.014  Score=50.65  Aligned_cols=102  Identities=19%  Similarity=0.204  Sum_probs=67.7

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHc--CCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHc---
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT---  255 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~--g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~---  255 (373)
                      ...++++||-+|+|. |..++.+++.+  +. +|++++.+++..+.+++    .|...-+.....+  ..+.+....   
T Consensus        76 ~~~~~~~VLeiG~G~-G~~~~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gd--a~~~l~~l~~~~  151 (247)
T 1sui_A           76 KLINAKNTMEIGVYT-GYSLLATALAIPEDG-KILAMDINKENYELGLPVIKKAGVDHKIDFREGP--ALPVLDEMIKDE  151 (247)
T ss_dssp             HHTTCCEEEEECCGG-GHHHHHHHHHSCTTC-EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHSG
T ss_pred             HhhCcCEEEEeCCCc-CHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECC--HHHHHHHHHhcc
Confidence            345678999998864 77788888876  45 89999999988877764    4543211111122  333333331   


Q ss_pred             --CCCccEEEEccCC---hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          256 --NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       256 --~~~~d~vid~~g~---~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                        .+.||+||-....   ...++.+.+.|+++ |.++.-..
T Consensus       152 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~d~~  191 (247)
T 1sui_A          152 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDNT  191 (247)
T ss_dssp             GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEECT
T ss_pred             CCCCCEEEEEEcCchHHHHHHHHHHHHhCCCC-eEEEEecC
Confidence              3479999864432   35678899999997 99887543

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=96.27  E-value=0.0076  Score=52.75  Aligned_cols=79  Identities=14%  Similarity=0.199  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcC---CcEEEEEcCChhHHHHHHhc---CCce-e--ecCCCCCccHHH---HHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAG---ASRIIGVDRSSKRFEEAKKF---GVTD-F--VNTSEHDRPIQE---VIAEM  254 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g---~~~V~~~~~~~~~~~~~~~l---g~~~-v--i~~~~~~~~~~~---~~~~~  254 (373)
                      .++++||+|+ |.+|.+.++.+...|   + +|++++++.++.+.++++   +... +  .|..+.+ .+.+   .+.+.
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~   97 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFD-AYDKLVADIEGV   97 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGG-GHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEecCCChH-HHHHHHHHHHHh
Confidence            4678999987 899999999998889   7 899998887654444332   3221 2  2332221 2333   33333


Q ss_pred             cCC-CccEEEEccCC
Q 017336          255 TNG-GVDRSVECTGN  268 (373)
Q Consensus       255 ~~~-~~d~vid~~g~  268 (373)
                      .+. ++|++|++.|.
T Consensus        98 ~g~~~id~li~~Ag~  112 (267)
T 1sny_A           98 TKDQGLNVLFNNAGI  112 (267)
T ss_dssp             HGGGCCSEEEECCCC
T ss_pred             cCCCCccEEEECCCc
Confidence            332 69999999873

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=96.27  E-value=0.008  Score=53.00  Aligned_cols=78  Identities=29%  Similarity=0.351  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCcee-e--cCCCCCccHHH---HHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF-V--NTSEHDRPIQE---VIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~v-i--~~~~~~~~~~~---~~~~~~~  256 (373)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+    ++.+.... +  |..+. ..+.+   .+.+.. 
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~-  101 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSE-SEIIEAFARLDEQG-  101 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCH-HHHHHHHHHHHHHT-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHHC-
Confidence            4689999987 8999999999999999 899999988765544    23344322 1  22221 11222   222222 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|+++++.|.
T Consensus       102 g~iD~lv~nAg~  113 (271)
T 4ibo_A          102 IDVDILVNNAGI  113 (271)
T ss_dssp             CCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999883

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=96.27  E-value=0.013  Score=51.24  Aligned_cols=78  Identities=21%  Similarity=0.246  Sum_probs=49.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHH-cCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHH---HHc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARI-AGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIA---EMT  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~-~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~---~~~  255 (373)
                      ++++|||+|+ |.+|..++..+.. .|+ +|++++++.++.+.+    ++.+... +  .|..+. ..+.+.+.   +..
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~   80 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL-QSIRALRDFLRKEY   80 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCH-HHHHHHHHHHHHhc
Confidence            5689999987 8999998888887 899 899998887655433    2223321 2  232221 11222222   222


Q ss_pred             CCCccEEEEccCC
Q 017336          256 NGGVDRSVECTGN  268 (373)
Q Consensus       256 ~~~~d~vid~~g~  268 (373)
                       +++|++|++.|.
T Consensus        81 -g~id~li~~Ag~   92 (276)
T 1wma_A           81 -GGLDVLVNNAGI   92 (276)
T ss_dssp             -SSEEEEEECCCC
T ss_pred             -CCCCEEEECCcc
Confidence             379999999873

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.26  E-value=0.033  Score=47.58  Aligned_cols=102  Identities=19%  Similarity=0.189  Sum_probs=68.2

Q ss_pred             hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC--cee--ecCCCCCccHHHHHHHHcCC
Q 017336          182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--TDF--VNTSEHDRPIQEVIAEMTNG  257 (373)
Q Consensus       182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~--~~v--i~~~~~~~~~~~~~~~~~~~  257 (373)
                      +...++++++||-+|+|. |..+..+++..|..+|++++.+++..+.+++.-.  +.+  +..+...  ... .... .+
T Consensus        68 ~~~~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~--~~~-~~~~-~~  142 (230)
T 1fbn_A           68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANK--PQE-YANI-VE  142 (230)
T ss_dssp             CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTC--GGG-GTTT-SC
T ss_pred             cccCCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCC--ccc-cccc-Cc
Confidence            445677899999999987 8888899998874499999999988877755311  111  1111111  000 0011 14


Q ss_pred             CccEEEEccCCh----HhHHHHHHHhhcCCcEEEEE
Q 017336          258 GVDRSVECTGNI----DNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       258 ~~d~vid~~g~~----~~~~~~~~~l~~~~g~~v~~  289 (373)
                      .+|+|+.....+    ..+..+.+.|+++ |++++.
T Consensus       143 ~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  177 (230)
T 1fbn_A          143 KVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA  177 (230)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cEEEEEEecCChhHHHHHHHHHHHhCCCC-cEEEEE
Confidence            799999765554    3478889999997 998875

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.26  E-value=0.006  Score=51.99  Aligned_cols=64  Identities=14%  Similarity=0.247  Sum_probs=43.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++.+             .|..+.+ .+.+.+.++  +++|+++++.
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~-------------~D~~~~~-~v~~~~~~~--g~id~lv~nA   67 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG-------------LDISDEK-SVYHYFETI--GAFDHLIVTA   67 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT-------------CCTTCHH-HHHHHHHHH--CSEEEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc-------------cCCCCHH-HHHHHHHHh--CCCCEEEECC
Confidence            4678999987 8999999998888898 8998877654             1222211 122233333  4789999887


Q ss_pred             CC
Q 017336          267 GN  268 (373)
Q Consensus       267 g~  268 (373)
                      |.
T Consensus        68 g~   69 (223)
T 3uce_A           68 GS   69 (223)
T ss_dssp             CC
T ss_pred             CC
Confidence            73

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.26  E-value=0.0084  Score=51.72  Aligned_cols=79  Identities=18%  Similarity=0.239  Sum_probs=52.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC--CcEEEEEcCChhHHHHHHhc-CCce-e--ecCCCCC--ccHHHHHHHHcCC-C
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAG--ASRIIGVDRSSKRFEEAKKF-GVTD-F--VNTSEHD--RPIQEVIAEMTNG-G  258 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g--~~~V~~~~~~~~~~~~~~~l-g~~~-v--i~~~~~~--~~~~~~~~~~~~~-~  258 (373)
                      +++|||+|+ |.+|..+++.+...|  + +|++++++.++.+.++++ +... +  .|..+.+  ..+.+.+.+..+. +
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            578999987 899999999998899  7 899999998877777665 2221 2  2222211  0122223333322 6


Q ss_pred             ccEEEEccCC
Q 017336          259 VDRSVECTGN  268 (373)
Q Consensus       259 ~d~vid~~g~  268 (373)
                      +|++|++.|.
T Consensus        82 id~li~~Ag~   91 (250)
T 1yo6_A           82 LSLLINNAGV   91 (250)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCcc
Confidence            9999998863

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=96.25  E-value=0.034  Score=52.03  Aligned_cols=95  Identities=16%  Similarity=0.177  Sum_probs=61.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCC--cEEEEEcCChhHHHHHH-hcC------Cce-eecCCCCCccHHHHHHHHcCCCc
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGA--SRIIGVDRSSKRFEEAK-KFG------VTD-FVNTSEHDRPIQEVIAEMTNGGV  259 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~--~~V~~~~~~~~~~~~~~-~lg------~~~-vi~~~~~~~~~~~~~~~~~~~~~  259 (373)
                      ++|+|+|+|.+|..+++.+...|.  ..|++++++.++.+.+. +++      +.. .+|..+. .++.+.+++.   ++
T Consensus         2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~-~~l~~~l~~~---~~   77 (405)
T 4ina_A            2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSI-EELVALINEV---KP   77 (405)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCH-HHHHHHHHHH---CC
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCH-HHHHHHHHhh---CC
Confidence            479999999999999998888773  38999999988876553 332      222 1222221 1122223222   68


Q ss_pred             cEEEEccCChHhHHHHHHHhhcCCcEEEEE
Q 017336          260 DRSVECTGNIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       260 d~vid~~g~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      |+||++++.......+..++..+ -.++.+
T Consensus        78 DvVin~ag~~~~~~v~~a~l~~g-~~vvD~  106 (405)
T 4ina_A           78 QIVLNIALPYQDLTIMEACLRTG-VPYLDT  106 (405)
T ss_dssp             SEEEECSCGGGHHHHHHHHHHHT-CCEEES
T ss_pred             CEEEECCCcccChHHHHHHHHhC-CCEEEe
Confidence            99999998655556677777775 555544

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=96.25  E-value=0.023  Score=48.82  Aligned_cols=78  Identities=24%  Similarity=0.310  Sum_probs=48.4

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEE-EcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIG-VDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG  257 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~-~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~  257 (373)
                      ++++||+|+ |.+|...++.+...|+ +|++ ..+++++.+.+    ++.+... .  .|..+. ..+.+.+.+..  -+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE-ADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSH-HHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCH-HHHHHHHHHHHHHcC
Confidence            478999987 8999999999999999 7777 47777665443    2234322 1  232221 11222222211  13


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus        79 ~id~li~~Ag~   89 (244)
T 1edo_A           79 TIDVVVNNAGI   89 (244)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.25  E-value=0.016  Score=49.08  Aligned_cols=95  Identities=14%  Similarity=0.190  Sum_probs=60.9

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          191 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       191 ~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      +|||+|+ |.+|...++.+...|+ +|+++++++++.+.+  .++..+ .|..+    ..+.+.+... ++|+||++.|.
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--~~~~~~~~D~~d----~~~~~~~~~~-~~d~vi~~ag~   73 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY--NNVKAVHFDVDW----TPEEMAKQLH-GMDAIINVSGS   73 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC--TTEEEEECCTTS----CHHHHHTTTT-TCSEEEECCCC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc--CCceEEEecccC----CHHHHHHHHc-CCCEEEECCcC
Confidence            6999997 9999999999999998 899999987764322  122221 12222    1234544444 69999999885


Q ss_pred             hH---------hHHHHHHHhhcC-CcEEEEEcCCC
Q 017336          269 ID---------NMISAFECVHDG-WGVAVLVGVPS  293 (373)
Q Consensus       269 ~~---------~~~~~~~~l~~~-~g~~v~~g~~~  293 (373)
                      ..         .....++.+... .++++.++...
T Consensus        74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  108 (219)
T 3dqp_A           74 GGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF  108 (219)
T ss_dssp             TTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence            32         123344444432 25888888754

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=96.24  E-value=0.011  Score=52.41  Aligned_cols=95  Identities=19%  Similarity=0.216  Sum_probs=64.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc-----CC---------ceeecCCCCCccHHHHHH
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-----GV---------TDFVNTSEHDRPIQEVIA  252 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l-----g~---------~~vi~~~~~~~~~~~~~~  252 (373)
                      ..+++||++|+|. |..+..+++. +..+|++++.+++..+.+++.     +.         ..+ .....+  ..+.+.
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v-~~~~~D--~~~~l~  148 (281)
T 1mjf_A           74 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKA-KLTIGD--GFEFIK  148 (281)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSE-EEEESC--HHHHHH
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcE-EEEECc--hHHHhc
Confidence            4568999998865 5666677777 766999999999988888763     21         111 111112  333344


Q ss_pred             HHcCCCccEEEEccC----------ChHhHHHHHHHhhcCCcEEEEE
Q 017336          253 EMTNGGVDRSVECTG----------NIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       253 ~~~~~~~d~vid~~g----------~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      .  .+.||+|+--..          ..+++..+.+.|+++ |.++..
T Consensus       149 ~--~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~  192 (281)
T 1mjf_A          149 N--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQ  192 (281)
T ss_dssp             H--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEE
T ss_pred             c--cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEE
Confidence            3  458999885433          246788999999997 988875

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.23  E-value=0.017  Score=51.18  Aligned_cols=79  Identities=24%  Similarity=0.347  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH-----------HHHHHhcCCcee-e--cCCCCC--ccHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-----------FEEAKKFGVTDF-V--NTSEHD--RPIQEV  250 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~-----------~~~~~~lg~~~v-i--~~~~~~--~~~~~~  250 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|+++++++++           .+.+++.+.... +  |..+.+  ..+.+.
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            4689999987 8999999999988999 89999887652           233344454332 2  332211  112223


Q ss_pred             HHHHcCCCccEEEEccCC
Q 017336          251 IAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       251 ~~~~~~~~~d~vid~~g~  268 (373)
                      +.+.. +++|++|++.|.
T Consensus        87 ~~~~~-g~id~lvnnAg~  103 (285)
T 3sc4_A           87 TVEQF-GGIDICVNNASA  103 (285)
T ss_dssp             HHHHH-SCCSEEEECCCC
T ss_pred             HHHHc-CCCCEEEECCCC
Confidence            33332 379999999884

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=96.23  E-value=0.0096  Score=51.62  Aligned_cols=74  Identities=26%  Similarity=0.289  Sum_probs=48.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHH---HHHHHcCCCccEEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQE---VIAEMTNGGVDRSV  263 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~---~~~~~~~~~~d~vi  263 (373)
                      .++++||+|+ |.+|.++++.+...|+ +|++++++.++.+.+.  +  ...|..+.+ .+.+   .+.+.. +++|++|
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~--~--~~~D~~~~~-~~~~~~~~~~~~~-g~id~lv   86 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF--G--VEVDVTDSD-AVDRAFTAVEEHQ-GPVEVLV   86 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE--E--EECCTTCHH-HHHHHHHHHHHHH-SSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHhc--C--eeccCCCHH-HHHHHHHHHHHHc-CCCCEEE
Confidence            4688999987 8999999999989999 8999888765433221  1  223333221 1222   222222 3799999


Q ss_pred             EccCC
Q 017336          264 ECTGN  268 (373)
Q Consensus       264 d~~g~  268 (373)
                      ++.|.
T Consensus        87 ~~Ag~   91 (247)
T 1uzm_A           87 SNAGL   91 (247)
T ss_dssp             EECSC
T ss_pred             ECCCC
Confidence            99874

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=96.22  E-value=0.011  Score=52.16  Aligned_cols=103  Identities=13%  Similarity=0.135  Sum_probs=68.6

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHc--CCcEEEEEcCChhHHHHHHhc-----CCceeecCCCCCccHHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKKF-----GVTDFVNTSEHDRPIQEVIA  252 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~--g~~~V~~~~~~~~~~~~~~~l-----g~~~vi~~~~~~~~~~~~~~  252 (373)
                      +.....+.++++||-+|+| .|..++.+++..  +. +|++++.+++..+.+++.     |.+.+-... .+  +.+   
T Consensus       102 ~~~~~~~~~~~~VLD~G~G-~G~~~~~la~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~-~d--~~~---  173 (275)
T 1yb2_A          102 IIMRCGLRPGMDILEVGVG-SGNMSSYILYALNGKG-TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSR-SD--IAD---  173 (275)
T ss_dssp             ----CCCCTTCEEEEECCT-TSHHHHHHHHHHTTSS-EEEEECSCHHHHHHHHHHHHTTSCCTTEEEEC-SC--TTT---
T ss_pred             HHHHcCCCCcCEEEEecCC-CCHHHHHHHHHcCCCC-EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEE-Cc--hhc---
Confidence            3455678899999999987 477788888874  44 899999999888877653     533221111 11  100   


Q ss_pred             HHcCCCccEEEEccCCh-HhHHHHHHHhhcCCcEEEEEcC
Q 017336          253 EMTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       253 ~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ....+.+|+|+.....+ ..+..+.+.|+++ |++++...
T Consensus       174 ~~~~~~fD~Vi~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~  212 (275)
T 1yb2_A          174 FISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYLP  212 (275)
T ss_dssp             CCCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEES
T ss_pred             cCcCCCccEEEEcCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            11123799999866544 5788999999997 99887754

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.22  E-value=0.015  Score=51.34  Aligned_cols=78  Identities=19%  Similarity=0.198  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-Hh----cCCce-e--ecCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KK----FGVTD-F--VNTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~----lg~~~-v--i~~~~~~--~~~~~~~~~~~~  256 (373)
                      .++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+ ++    .+... .  .|..+.+  ..+.+.+.+.. 
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-  103 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF-  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            5789999987 8999999999999999 899999987765433 22    24332 1  2332211  01222222222 


Q ss_pred             CCccEEEEccC
Q 017336          257 GGVDRSVECTG  267 (373)
Q Consensus       257 ~~~d~vid~~g  267 (373)
                      +++|+++++.|
T Consensus       104 g~id~lv~nAg  114 (277)
T 4fc7_A          104 GRIDILINCAA  114 (277)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            37999999988

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=96.22  E-value=0.038  Score=50.09  Aligned_cols=132  Identities=14%  Similarity=0.155  Sum_probs=75.5

Q ss_pred             EEEEECCCHHHHHH-HHHHHHcCCcEEEEEcCChhHHHH-HHhcCCceeecCCCCCccHHHHHHHHcC-CCccEEEEccC
Q 017336          191 SVAVFGLGAVGLAA-AEGARIAGASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTN-GGVDRSVECTG  267 (373)
Q Consensus       191 ~vlI~G~g~~G~~a-i~la~~~g~~~V~~~~~~~~~~~~-~~~lg~~~vi~~~~~~~~~~~~~~~~~~-~~~d~vid~~g  267 (373)
                      +|.|+|+|.+|... +..++..+++.+.++++++++.+. ++++|...++  .  +  +.+    +.. ..+|+|+.++.
T Consensus         2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~--~--~--~~~----~l~~~~~D~V~i~tp   71 (332)
T 2glx_A            2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSV--T--S--VEE----LVGDPDVDAVYVSTT   71 (332)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCB--S--C--HHH----HHTCTTCCEEEECSC
T ss_pred             eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCccc--C--C--HHH----HhcCCCCCEEEEeCC
Confidence            58899999999875 544333777434466788777654 4557764222  1  1  322    222 26999999999


Q ss_pred             ChHhHHHHHHHhhcCCcEEEEEcCCCCCceeec--cchhhc--ccceEEEEeccCCCCCCCHHHHHHHHHcCCC
Q 017336          268 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT--KPINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  337 (373)
Q Consensus       268 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~--~~~~~~--~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l  337 (373)
                      ...+.+.+..+|..  |+-+++..+... +..-  ......  +++.+.-..  ..+....++.+.+++++|.+
T Consensus        72 ~~~h~~~~~~al~~--Gk~v~~ekP~~~-~~~~~~~l~~~a~~~g~~~~~~~--~~r~~p~~~~~~~~i~~g~i  140 (332)
T 2glx_A           72 NELHREQTLAAIRA--GKHVLCEKPLAM-TLEDAREMVVAAREAGVVLGTNH--HLRNAAAHRAMRDAIAEGRI  140 (332)
T ss_dssp             GGGHHHHHHHHHHT--TCEEEECSSSCS-SHHHHHHHHHHHHHHTCCEEECC--CGGGSHHHHHHHHHHHTTTT
T ss_pred             hhHhHHHHHHHHHC--CCeEEEeCCCcC-CHHHHHHHHHHHHHcCCEEEEee--hhhcCHHHHHHHHHHHcCCC
Confidence            87788888888887  455555432211 1110  011111  333332211  22223347778888888865

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=96.22  E-value=0.012  Score=51.71  Aligned_cols=80  Identities=19%  Similarity=0.268  Sum_probs=49.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCC-hhHHHHH----HhcCCce-eecCCCCCc-cHHHHHHHHc--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS-SKRFEEA----KKFGVTD-FVNTSEHDR-PIQEVIAEMT--NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~-~~~~~~~----~~lg~~~-vi~~~~~~~-~~~~~~~~~~--~~  257 (373)
                      .++++||+|+ |++|.++++.+...|+ +|++++++ ++..+.+    ++.+... ++..+-.+. .+.+.+.+..  .+
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG  106 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4789999987 8999999999989999 78888884 4443333    3344432 222221121 1222222221  13


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus       107 ~id~li~nAg~  117 (271)
T 4iin_A          107 GLSYLVNNAGV  117 (271)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999884

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=96.21  E-value=0.011  Score=51.36  Aligned_cols=77  Identities=22%  Similarity=0.324  Sum_probs=50.3

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCce-ee--cCCCCCccHHHHHHHHcC--CCccEE
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FV--NTSEHDRPIQEVIAEMTN--GGVDRS  262 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~~-vi--~~~~~~~~~~~~~~~~~~--~~~d~v  262 (373)
                      +++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +++... .+  |..+. ..+.+.+.+...  +++|++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~iD~l   78 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNR-AAIEEMLASLPAEWCNIDIL   78 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCH-HHHHHHHHTSCTTTCCCCEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCH-HHHHHHHHHHHHhCCCCCEE
Confidence            46899987 8999999999989999 8999999887766543 344322 22  32221 113233333222  379999


Q ss_pred             EEccCC
Q 017336          263 VECTGN  268 (373)
Q Consensus       263 id~~g~  268 (373)
                      |++.|.
T Consensus        79 vnnAg~   84 (248)
T 3asu_A           79 VNNAGL   84 (248)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            998873

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=96.21  E-value=0.011  Score=51.13  Aligned_cols=78  Identities=18%  Similarity=0.265  Sum_probs=50.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-ee--cCCCCCccHHHHHH---HHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIA---EMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-vi--~~~~~~~~~~~~~~---~~~~  256 (373)
                      .++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+    ++.+... .+  |..+.+ .+.+.+.   +.. 
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~-   86 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQ-ELSALADFAISKL-   86 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHH-HHHHHHHHHHHhc-
Confidence            4688999987 8999999999988999 899999987765433    2234322 22  222211 1222222   222 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|++.|.
T Consensus        87 ~~~d~vi~~Ag~   98 (255)
T 1fmc_A           87 GKVDILVNNAGG   98 (255)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999873

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.21  E-value=0.011  Score=54.28  Aligned_cols=48  Identities=25%  Similarity=0.338  Sum_probs=41.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHH-HHHhcCCc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVT  235 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~-~~~~lg~~  235 (373)
                      -.+++|+|.|.|.+|..+++.+...|+ +|++.+++.++.+ ++++++++
T Consensus       171 L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~~~~~l~~~a~~~ga~  219 (364)
T 1leh_A          171 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD  219 (364)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE
Confidence            478999999999999999999999999 7999999888766 44556764

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=96.21  E-value=0.017  Score=51.64  Aligned_cols=41  Identities=22%  Similarity=0.298  Sum_probs=34.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA  229 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~  229 (373)
                      .+++|||+|+ |.+|.+.+..+...|+ +|++++++.++.+.+
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~   58 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSA   58 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence            4689999987 8999999999989999 899999987765543

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=96.20  E-value=0.022  Score=51.23  Aligned_cols=100  Identities=17%  Similarity=0.142  Sum_probs=69.3

Q ss_pred             hccC-CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc---eeecCCCCCccHHHHHHH
Q 017336          182 NVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT---DFVNTSEHDRPIQEVIAE  253 (373)
Q Consensus       182 ~~~~-~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~---~vi~~~~~~~~~~~~~~~  253 (373)
                      +... +.++++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++    .|..   .++..+-.+  +     .
T Consensus       110 ~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~-----~  180 (312)
T 3vc1_A          110 DHLGQAGPDDTLVDAGCGR-GGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLD--T-----P  180 (312)
T ss_dssp             TTSCCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS--C-----C
T ss_pred             HHhccCCCCCEEEEecCCC-CHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhc--C-----C
Confidence            4444 78899999999875 7778888888787 89999999988877765    3432   122111111  0     0


Q ss_pred             HcCCCccEEEEc-----cCChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          254 MTNGGVDRSVEC-----TGNIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       254 ~~~~~~d~vid~-----~g~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      +..+.||+|+..     .+....+..+.+.|+++ |++++...
T Consensus       181 ~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  222 (312)
T 3vc1_A          181 FDKGAVTASWNNESTMYVDLHDLFSEHSRFLKVG-GRYVTITG  222 (312)
T ss_dssp             CCTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCCCEeEEEECCchhhCCHHHHHHHHHHHcCCC-cEEEEEEc
Confidence            122479999874     22346788999999997 99987754

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.19  E-value=0.014  Score=47.87  Aligned_cols=100  Identities=18%  Similarity=0.280  Sum_probs=68.1

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCC-ceeecCCCCCccHHHHHHHHc
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV-TDFVNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~-~~vi~~~~~~~~~~~~~~~~~  255 (373)
                      .....+.++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++    .+. +.+ .....+  +.+.   ..
T Consensus        26 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~-~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~-~~~~~d--~~~~---~~   96 (192)
T 1l3i_A           26 MCLAEPGKNDVAVDVGCGT-GGVTLELAGRV-R-RVYAIDRNPEAISTTEMNLQRHGLGDNV-TLMEGD--APEA---LC   96 (192)
T ss_dssp             HHHHCCCTTCEEEEESCTT-SHHHHHHHTTS-S-EEEEEESCHHHHHHHHHHHHHTTCCTTE-EEEESC--HHHH---HT
T ss_pred             HHhcCCCCCCEEEEECCCC-CHHHHHHHHhc-C-EEEEEECCHHHHHHHHHHHHHcCCCcce-EEEecC--HHHh---cc
Confidence            3445678899999999877 88888888766 4 89999999988887765    344 221 111112  3321   22


Q ss_pred             C-CCccEEEEccCC---hHhHHHHHHHhhcCCcEEEEEc
Q 017336          256 N-GGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       256 ~-~~~d~vid~~g~---~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      . +.+|+|+.....   ...+..+.+.|+++ |++++..
T Consensus        97 ~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~g-G~l~~~~  134 (192)
T 1l3i_A           97 KIPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTA  134 (192)
T ss_dssp             TSCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             cCCCCCEEEECCchHHHHHHHHHHHHhcCCC-cEEEEEe
Confidence            2 379999976431   35677888999997 9888754

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.19  E-value=0.012  Score=52.05  Aligned_cols=69  Identities=12%  Similarity=0.165  Sum_probs=50.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCC---ceeecCCCCCccHHHHHHHHcCCCccEEE
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV---TDFVNTSEHDRPIQEVIAEMTNGGVDRSV  263 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~---~~vi~~~~~~~~~~~~~~~~~~~~~d~vi  263 (373)
                      .+++++|+|+|++|.+++..+...|+.+|++++++.++.+.+ ++++.   -.+...++           .. ..+|+||
T Consensus       125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~-----------l~-~~aDiII  192 (281)
T 3o8q_A          125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ-----------LK-QSYDVII  192 (281)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG-----------CC-SCEEEEE
T ss_pred             cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH-----------hc-CCCCEEE
Confidence            678999999999999999988899977899999998876554 44442   12222211           11 3699999


Q ss_pred             EccCC
Q 017336          264 ECTGN  268 (373)
Q Consensus       264 d~~g~  268 (373)
                      ++++.
T Consensus       193 naTp~  197 (281)
T 3o8q_A          193 NSTSA  197 (281)
T ss_dssp             ECSCC
T ss_pred             EcCcC
Confidence            99876

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.19  E-value=0.015  Score=50.66  Aligned_cols=95  Identities=24%  Similarity=0.304  Sum_probs=65.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcCCCccE
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDR  261 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~  261 (373)
                      +.++++||-+|+|. |..++.+++ .|+ +|++++.++...+.+++    .+..  +.....+  +.+.   +..+.+|+
T Consensus       118 ~~~~~~VLDiGcG~-G~l~~~la~-~g~-~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d--~~~~---~~~~~fD~  187 (254)
T 2nxc_A          118 LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVR--PRFLEGS--LEAA---LPFGPFDL  187 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCC--CEEEESC--HHHH---GGGCCEEE
T ss_pred             cCCCCEEEEecCCC-cHHHHHHHH-hCC-eEEEEECCHHHHHHHHHHHHHcCCc--EEEEECC--hhhc---CcCCCCCE
Confidence            57889999999876 777777666 577 99999999988777765    3433  1111122  3222   22348999


Q ss_pred             EEEccCC---hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          262 SVECTGN---IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       262 vid~~g~---~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      |+.....   ...+..+.+.|+++ |++++.+.
T Consensus       188 Vv~n~~~~~~~~~l~~~~~~Lkpg-G~lils~~  219 (254)
T 2nxc_A          188 LVANLYAELHAALAPRYREALVPG-GRALLTGI  219 (254)
T ss_dssp             EEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             EEECCcHHHHHHHHHHHHHHcCCC-CEEEEEee
Confidence            9975422   24677888999997 99988654

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=96.18  E-value=0.017  Score=50.08  Aligned_cols=79  Identities=24%  Similarity=0.390  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCce--e--ecCCCCCccHHHHHHHHc-CCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD--F--VNTSEHDRPIQEVIAEMT-NGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~--v--i~~~~~~~~~~~~~~~~~-~~~~d  260 (373)
                      .++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ ++++...  .  .|..+.+ .+.+.+.+.. -+++|
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~id   87 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQELGAAVAARIVADVTDAE-AMTAAAAEAEAVAPVS   87 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHH-HHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHH-HHHHHHHHHHhhCCCc
Confidence            4689999987 8999999999999999 899999988776544 3344322  1  2322211 1222222111 14799


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      ++|++.|.
T Consensus        88 ~li~~Ag~   95 (254)
T 2wsb_A           88 ILVNSAGI   95 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999873

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.18  E-value=0.026  Score=49.88  Aligned_cols=34  Identities=29%  Similarity=0.185  Sum_probs=30.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      .++++||+|+ |++|.++++.+...|+ +|++++++
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~   43 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDIC   43 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEccc
Confidence            4789999987 8999999999999999 89888876

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=96.17  E-value=0.0099  Score=50.50  Aligned_cols=102  Identities=17%  Similarity=0.129  Sum_probs=67.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHc--CCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcC--
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN--  256 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~--g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~--  256 (373)
                      ...++++||-+|+|. |..++.+++.+  +. +|++++.+++..+.+++    .|...-+.....+  ..+.+.....  
T Consensus        55 ~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~~~~~~~~~  130 (223)
T 3duw_A           55 QIQGARNILEIGTLG-GYSTIWLARGLSSGG-RVVTLEASEKHADIARSNIERANLNDRVEVRTGL--ALDSLQQIENEK  130 (223)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTCCSSC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC--HHHHHHHHHHTT
T ss_pred             HhhCCCEEEEecCCc-cHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHhcC
Confidence            445788999999874 77788888877  45 89999999988777754    3543211111122  3333333221  


Q ss_pred             -CCccEEEEccCC---hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          257 -GGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       257 -~~~d~vid~~g~---~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                       +.||+||-....   ...+..+.+.|+++ |.++.-+.
T Consensus       131 ~~~fD~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  168 (223)
T 3duw_A          131 YEPFDFIFIDADKQNNPAYFEWALKLSRPG-TVIIGDNV  168 (223)
T ss_dssp             CCCCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEESC
T ss_pred             CCCcCEEEEcCCcHHHHHHHHHHHHhcCCC-cEEEEeCC
Confidence             369999854432   35678889999997 98877544

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=96.17  E-value=0.017  Score=50.90  Aligned_cols=79  Identities=15%  Similarity=0.130  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHHHHHH-hc----CCce-e--ecCCCCC---ccHHHHHH--
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEAK-KF----GVTD-F--VNTSEHD---RPIQEVIA--  252 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~-~~~~~~~~~-~l----g~~~-v--i~~~~~~---~~~~~~~~--  252 (373)
                      .++++||+|+ |++|.+++..+...|+ +|+++++ ++++.+.+. ++    +... .  .|..+..   ..+.+.+.  
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence            4678999987 8999999999989999 8999988 776655432 22    4322 1  2333320   11222222  


Q ss_pred             -HHcCCCccEEEEccCC
Q 017336          253 -EMTNGGVDRSVECTGN  268 (373)
Q Consensus       253 -~~~~~~~d~vid~~g~  268 (373)
                       +.. +++|++|++.|.
T Consensus        89 ~~~~-g~id~lv~nAg~  104 (276)
T 1mxh_A           89 FRAF-GRCDVLVNNASA  104 (276)
T ss_dssp             HHHH-SCCCEEEECCCC
T ss_pred             HHhc-CCCCEEEECCCC
Confidence             222 379999999873

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.17  E-value=0.015  Score=50.18  Aligned_cols=76  Identities=26%  Similarity=0.331  Sum_probs=49.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hc----CCce-ee--cCCCCCccHHHHHH---HHcC
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF----GVTD-FV--NTSEHDRPIQEVIA---EMTN  256 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~l----g~~~-vi--~~~~~~~~~~~~~~---~~~~  256 (373)
                      ++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+. ++    +... ++  |..+.+ .+.+.+.   +.. 
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~-   78 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVADEG-DVNAAIAATMEQF-   78 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHH-HHHHHHHHHHHHH-
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHH-HHHHHHHHHHHHh-
Confidence            578999987 8999999999989998 8999999887665442 22    3221 22  222211 1222222   222 


Q ss_pred             CCccEEEEccC
Q 017336          257 GGVDRSVECTG  267 (373)
Q Consensus       257 ~~~d~vid~~g  267 (373)
                      +++|++|++.|
T Consensus        79 ~~id~li~~Ag   89 (250)
T 2cfc_A           79 GAIDVLVNNAG   89 (250)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999987

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.17  E-value=0.021  Score=48.49  Aligned_cols=97  Identities=15%  Similarity=0.214  Sum_probs=60.8

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      ++|||+|+ |.+|...++.+...|. +|+++++++++.+.+. -++. ++..+-.+   .+.+.+... ++|+||++.|.
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~~-~~~~Dl~d---~~~~~~~~~-~~d~vi~~a~~   77 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN-EHLK-VKKADVSS---LDEVCEVCK-GADAVISAFNP   77 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC-TTEE-EECCCTTC---HHHHHHHHT-TCSEEEECCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc-CceE-EEEecCCC---HHHHHHHhc-CCCEEEEeCcC
Confidence            68999997 8999999999999998 8999999877643221 1221 22111112   123444433 69999999876


Q ss_pred             h-----------HhHHHHHHHhhcC-CcEEEEEcCCC
Q 017336          269 I-----------DNMISAFECVHDG-WGVAVLVGVPS  293 (373)
Q Consensus       269 ~-----------~~~~~~~~~l~~~-~g~~v~~g~~~  293 (373)
                      .           ......++.+... ..+++.++...
T Consensus        78 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  114 (227)
T 3dhn_A           78 GWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG  114 (227)
T ss_dssp             ------CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence            3           1223444555443 14888887653

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=96.15  E-value=0.027  Score=49.11  Aligned_cols=78  Identities=19%  Similarity=0.226  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-ee--cCCCCCccHHHHHHHH---cC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FV--NTSEHDRPIQEVIAEM---TN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-vi--~~~~~~~~~~~~~~~~---~~  256 (373)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.    +.+... .+  |..+. ..+.+.+.+.   ..
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQE-SEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSH-HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCH-HHHHHHHHHHHHhcC
Confidence            4688999987 8999999999999999 8999989877655432    224322 12  32221 1122223322   13


Q ss_pred             CCccEEEEccC
Q 017336          257 GGVDRSVECTG  267 (373)
Q Consensus       257 ~~~d~vid~~g  267 (373)
                      +++|+++++.|
T Consensus        82 g~id~lvnnAg   92 (260)
T 2qq5_A           82 GRLDVLVNNAY   92 (260)
T ss_dssp             TCCCEEEECCC
T ss_pred             CCceEEEECCc
Confidence            57999999984

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.15  E-value=0.02  Score=50.61  Aligned_cols=79  Identities=23%  Similarity=0.289  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC-------------ChhHHHHH----HhcCCcee---ecCCCCC--
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-------------SSKRFEEA----KKFGVTDF---VNTSEHD--  244 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~-------------~~~~~~~~----~~lg~~~v---i~~~~~~--  244 (373)
                      .++++||+|+ |++|.++++.+...|+ +|+++++             ++++.+.+    ++.+....   .|..+.+  
T Consensus        14 ~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           14 QGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            5789999987 8999999999999999 8888876             45544433    23343321   2332211  


Q ss_pred             ccHHHHHHHHcCCCccEEEEccCC
Q 017336          245 RPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       245 ~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      ..+.+.+.+.. +++|+++++.|.
T Consensus        93 ~~~~~~~~~~~-g~id~lvnnAg~  115 (280)
T 3pgx_A           93 RELVADGMEQF-GRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHH-CCCCEEEECCCC
T ss_pred             HHHHHHHHHHc-CCCCEEEECCCC
Confidence            01222222222 379999999874

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=96.15  E-value=0.012  Score=49.97  Aligned_cols=98  Identities=17%  Similarity=0.165  Sum_probs=67.7

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHh----cC-----Cce--eecCCCCCccHHHHHH
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FG-----VTD--FVNTSEHDRPIQEVIA  252 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~----lg-----~~~--vi~~~~~~~~~~~~~~  252 (373)
                      .++++++||-+|+|. |..+..+++..|. .+|++++.+++..+.+++    .+     .+.  ++..   +  ..+.  
T Consensus        74 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~---d--~~~~--  145 (226)
T 1i1n_A           74 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG---D--GRMG--  145 (226)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES---C--GGGC--
T ss_pred             hCCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEEC---C--cccC--
Confidence            377899999999876 8888888888763 289999999988877754    22     111  1111   1  1000  


Q ss_pred             HHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          253 EMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       253 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ....+.||+|+........+..+.+.|+++ |++++.-.
T Consensus       146 ~~~~~~fD~i~~~~~~~~~~~~~~~~Lkpg-G~lv~~~~  183 (226)
T 1i1n_A          146 YAEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILPVG  183 (226)
T ss_dssp             CGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEES
T ss_pred             cccCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEEe
Confidence            011237999998776657788999999997 98877533

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.14  E-value=0.013  Score=51.80  Aligned_cols=78  Identities=27%  Similarity=0.196  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~--~~~~~~~~~~~~~  257 (373)
                      .++++||+|+ +++|.++++.+...|+ +|+++++++++.+.+    ++.+... .  .|..+.+  ..+.+.+.+.  +
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~--g  108 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI--A  108 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH--S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh--C
Confidence            4689999987 8999999999999999 899998887654433    2334332 1  2333322  1123333333  5


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|+++++.|.
T Consensus       109 ~iD~lvnnAg~  119 (275)
T 4imr_A          109 PVDILVINASA  119 (275)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999883

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.14  E-value=0.021  Score=50.32  Aligned_cols=90  Identities=21%  Similarity=0.180  Sum_probs=59.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHH-HHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~-~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid  264 (373)
                      ...++++||+|+|++|.+++..+...|+.+|+++.|+.+|.+ ++++++.+ ..+  ..         .  ...+|+||+
T Consensus       116 ~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~-~~~--~~---------~--~~~~DivIn  181 (271)
T 1npy_A          116 LNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-YIN--SL---------E--NQQADILVN  181 (271)
T ss_dssp             CCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-EES--CC---------T--TCCCSEEEE
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-cch--hh---------h--cccCCEEEE
Confidence            345789999999999999999999999878999999987754 44556642 110  10         0  026899999


Q ss_pred             ccCChHhH-------HHHHHHhhcCCcEEEEEc
Q 017336          265 CTGNIDNM-------ISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       265 ~~g~~~~~-------~~~~~~l~~~~g~~v~~g  290 (373)
                      +++.....       ......+.++ ..++.+-
T Consensus       182 aTp~gm~~~~~~~~~~~~~~~l~~~-~~v~Dlv  213 (271)
T 1npy_A          182 VTSIGMKGGKEEMDLAFPKAFIDNA-SVAFDVV  213 (271)
T ss_dssp             CSSTTCTTSTTTTSCSSCHHHHHHC-SEEEECC
T ss_pred             CCCCCccCccccCCCCCCHHHcCCC-CEEEEee
Confidence            98863311       1123456664 5555443

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.13  E-value=0.0066  Score=51.89  Aligned_cols=95  Identities=16%  Similarity=0.189  Sum_probs=66.8

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC------cEEEEEcCChhHHHHHHhc----C-----Cce--eecCCCCCccH
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAGA------SRIIGVDRSSKRFEEAKKF----G-----VTD--FVNTSEHDRPI  247 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~------~~V~~~~~~~~~~~~~~~l----g-----~~~--vi~~~~~~~~~  247 (373)
                      .++++++||-+|+|. |..+..+++..+.      .+|++++.+++..+.+++.    +     ...  ++..+     .
T Consensus        81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d-----~  154 (227)
T 1r18_A           81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGD-----G  154 (227)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESC-----G
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECC-----c
Confidence            578899999999986 8888888887662      3899999999887777542    2     111  12111     1


Q ss_pred             HHHHHHHcC-CCccEEEEccCChHhHHHHHHHhhcCCcEEEEE
Q 017336          248 QEVIAEMTN-GGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       248 ~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      .+   .... +.||+|+...........+.+.|+++ |++++.
T Consensus       155 ~~---~~~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lvi~  193 (227)
T 1r18_A          155 RK---GYPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVP  193 (227)
T ss_dssp             GG---CCGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             cc---CCCcCCCccEEEECCchHHHHHHHHHHhcCC-CEEEEE
Confidence            00   1111 47999998877666778999999997 988764

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=96.13  E-value=0.025  Score=49.97  Aligned_cols=78  Identities=18%  Similarity=0.207  Sum_probs=49.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHHHHH----HhcCCce-e--ecCCCCCccHHH---HHHHHc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTD-F--VNTSEHDRPIQE---VIAEMT  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~-~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~---~~~~~~  255 (373)
                      .++++||+|+ |++|.++++.+...|+ +|+++++ ++++.+.+    ++.+... .  .|..+.+ .+.+   .+.+..
T Consensus        28 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~  105 (280)
T 4da9_A           28 ARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLS-SHQATVDAVVAEF  105 (280)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGG-GHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHH-HHHHHHHHHHHHc
Confidence            5789999987 8999999999999999 7888874 55544332    3344432 1  2333221 2333   333333


Q ss_pred             CCCccEEEEccCC
Q 017336          256 NGGVDRSVECTGN  268 (373)
Q Consensus       256 ~~~~d~vid~~g~  268 (373)
                       +++|++|++.|.
T Consensus       106 -g~iD~lvnnAg~  117 (280)
T 4da9_A          106 -GRIDCLVNNAGI  117 (280)
T ss_dssp             -SCCCEEEEECC-
T ss_pred             -CCCCEEEECCCc
Confidence             379999999875

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=96.13  E-value=0.013  Score=49.94  Aligned_cols=100  Identities=20%  Similarity=0.225  Sum_probs=68.8

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC---c-eeecCCCCCccHHHHHHHHcC
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV---T-DFVNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~---~-~vi~~~~~~~~~~~~~~~~~~  256 (373)
                      .....+.++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++...   . .++..+     ..+..  ...
T Consensus        63 ~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~-~-~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d-----~~~~~--~~~  132 (231)
T 1vbf_A           63 LDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGD-----GTLGY--EEE  132 (231)
T ss_dssp             HHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESC-----GGGCC--GGG
T ss_pred             HHhcCCCCCCEEEEEcCCC-CHHHHHHHHHc-C-EEEEEeCCHHHHHHHHHHHhhcCCeEEEECC-----ccccc--ccC
Confidence            4456778899999999986 88888888764 4 89999999998888876421   1 122111     10100  112


Q ss_pred             CCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          257 GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       257 ~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      +.+|+|+....-......+.+.|+++ |++++.-.
T Consensus       133 ~~fD~v~~~~~~~~~~~~~~~~L~pg-G~l~~~~~  166 (231)
T 1vbf_A          133 KPYDRVVVWATAPTLLCKPYEQLKEG-GIMILPIG  166 (231)
T ss_dssp             CCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEEC
T ss_pred             CCccEEEECCcHHHHHHHHHHHcCCC-cEEEEEEc
Confidence            47999998766545567889999997 98887644

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=96.13  E-value=0.015  Score=51.41  Aligned_cols=96  Identities=15%  Similarity=0.113  Sum_probs=62.8

Q ss_pred             EEEEECC-CHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          191 SVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       191 ~vlI~G~-g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      +|||+|+ |.+|...++.+... |. +|+++.++.++...+...++..+ .|..+     .+.+.+... ++|+||.+.+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~~v~~~~~D~~d-----~~~l~~~~~-~~d~vi~~a~   74 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRGKVSVRQLDYFN-----QESMVEAFK-GMDTVVFIPS   74 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBTTBEEEECCTTC-----HHHHHHHTT-TCSEEEECCC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhCCCEEEEcCCCC-----HHHHHHHHh-CCCEEEEeCC
Confidence            5899997 99999999988877 88 78899898877555444455433 23322     123444444 7999999987


Q ss_pred             Ch-------HhHHHHHHHhhcC-CcEEEEEcCCC
Q 017336          268 NI-------DNMISAFECVHDG-WGVAVLVGVPS  293 (373)
Q Consensus       268 ~~-------~~~~~~~~~l~~~-~g~~v~~g~~~  293 (373)
                      ..       ......++.+... .++++.++...
T Consensus        75 ~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           75 IIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence            42       1223445555443 25788887654

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=96.12  E-value=0.01  Score=52.29  Aligned_cols=77  Identities=13%  Similarity=0.219  Sum_probs=50.0

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCC--c-ee--ecCCCCCccHHHHHHHHcC--CCcc
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGV--T-DF--VNTSEHDRPIQEVIAEMTN--GGVD  260 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~--~-~v--i~~~~~~~~~~~~~~~~~~--~~~d  260 (373)
                      +++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. ++..  . ..  .|..+.+ .+.+.+.+...  +++|
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~iD   99 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRA-AMSAAVDNLPEEFATLR   99 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHH-HHHHHHHTCCGGGSSCC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHhCCCC
Confidence            78999987 8999999999999999 8999999887766543 2321  1 12  2322211 12222332211  3689


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      ++|++.|.
T Consensus       100 ~lvnnAG~  107 (272)
T 2nwq_A          100 GLINNAGL  107 (272)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=96.12  E-value=0.017  Score=50.32  Aligned_cols=77  Identities=22%  Similarity=0.244  Sum_probs=49.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH--HHHH-Hh---cCCce-e--ecCCCCCccHHH---HHHHHc
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEEA-KK---FGVTD-F--VNTSEHDRPIQE---VIAEMT  255 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~--~~~~-~~---lg~~~-v--i~~~~~~~~~~~---~~~~~~  255 (373)
                      ++++||+|+ |++|.+.++.+...|+ +|++++++.++  .+.+ ++   .+... .  .|..+.+ .+.+   .+.+..
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKA-NFDSAIDEAAEKL   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHH-HHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHh
Confidence            578999987 8999999998888899 89999887766  3332 22   24322 1  2322211 1222   222222


Q ss_pred             CCCccEEEEccCC
Q 017336          256 NGGVDRSVECTGN  268 (373)
Q Consensus       256 ~~~~d~vid~~g~  268 (373)
                       +++|++|++.|.
T Consensus        80 -g~iD~lv~nAg~   91 (258)
T 3a28_C           80 -GGFDVLVNNAGI   91 (258)
T ss_dssp             -TCCCEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             379999999873

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=96.09  E-value=0.0099  Score=54.15  Aligned_cols=99  Identities=21%  Similarity=0.184  Sum_probs=65.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc------CC--ceeecCCCCCccHHHHHHHHcCC
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF------GV--TDFVNTSEHDRPIQEVIAEMTNG  257 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l------g~--~~vi~~~~~~~~~~~~~~~~~~~  257 (373)
                      ...+++||.+|+|. |..+..+++..+..+|++++.+++..+.+++.      +.  ..+ .....+  ..+.+.....+
T Consensus       118 ~~~~~~VLdIG~G~-G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv-~~~~~D--~~~~l~~~~~~  193 (334)
T 1xj5_A          118 IPNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRV-NLVIGD--GVAFLKNAAEG  193 (334)
T ss_dssp             SSCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTE-EEEESC--HHHHHHTSCTT
T ss_pred             CCCCCEEEEECCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcE-EEEECC--HHHHHHhccCC
Confidence            35668999998864 66677777766545999999999988888763      11  111 111112  44444333334


Q ss_pred             CccEEEEccC----------ChHhHHHHHHHhhcCCcEEEEE
Q 017336          258 GVDRSVECTG----------NIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       258 ~~d~vid~~g----------~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      .||+|+.-..          ...++..+.+.|+++ |.+++-
T Consensus       194 ~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~  234 (334)
T 1xj5_A          194 SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQ  234 (334)
T ss_dssp             CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CccEEEECCCCccCcchhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence            7999886322          246788999999997 999875

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.09  E-value=0.0099  Score=51.59  Aligned_cols=79  Identities=25%  Similarity=0.392  Sum_probs=49.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCC-hhHHHHH----HhcCCce-ee--cCCCCCccHHHHHHHHc--C
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS-SKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT--N  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~-~~~~~~~----~~lg~~~-vi--~~~~~~~~~~~~~~~~~--~  256 (373)
                      .++++||+|+ |.+|...+..+...|+ +|++++++ .++.+.+    ++.+... ++  |..+. ..+.+.+.+..  -
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   83 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLATS-EACQQLVDEFVAKF   83 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHHc
Confidence            3678999987 8999999999988999 79888887 5554432    2234322 22  22221 11222222221  1


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|++.|.
T Consensus        84 g~id~vi~~Ag~   95 (258)
T 3afn_B           84 GGIDVLINNAGG   95 (258)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999874

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.09  E-value=0.029  Score=50.40  Aligned_cols=42  Identities=24%  Similarity=0.340  Sum_probs=35.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC---hhHHHHH
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS---SKRFEEA  229 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~---~~~~~~~  229 (373)
                      .++++||+|+|++|.+++..+...|+++|+++.|+   .+|.+.+
T Consensus       147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~l  191 (312)
T 3t4e_A          147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAF  191 (312)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHH
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHH
Confidence            57899999999999999999999999889999999   5554443

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.08  E-value=0.022  Score=50.84  Aligned_cols=78  Identities=13%  Similarity=0.189  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hc----CCce-e--ecCCCCCccHHHHHHHHc--C
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF----GVTD-F--VNTSEHDRPIQEVIAEMT--N  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~l----g~~~-v--i~~~~~~~~~~~~~~~~~--~  256 (373)
                      .++++||+|+ |.+|.+.+..+...|+ +|++++++.++.+.+. ++    +... +  .|..+. ..+.+.+.+..  -
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~  102 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDP-DMVQNTVSELIKVA  102 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCH-HHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCH-HHHHHHHHHHHHHc
Confidence            4689999987 8999999999999999 8999999887655432 22    4322 2  232221 11222222221  2


Q ss_pred             CCccEEEEccC
Q 017336          257 GGVDRSVECTG  267 (373)
Q Consensus       257 ~~~d~vid~~g  267 (373)
                      +.+|++|++.|
T Consensus       103 g~id~li~~Ag  113 (302)
T 1w6u_A          103 GHPNIVINNAA  113 (302)
T ss_dssp             CSCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37899999987

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=96.07  E-value=0.02  Score=49.30  Aligned_cols=103  Identities=17%  Similarity=0.164  Sum_probs=67.6

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHc----
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT----  255 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~----  255 (373)
                      ...++++||-+|+|. |..++.+++.+. -.+|++++.+++..+.+++    .|...-+.....+  ..+.+..+.    
T Consensus        67 ~~~~~~~VLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd--a~~~l~~l~~~~~  143 (237)
T 3c3y_A           67 KLVNAKKTIEVGVFT-GYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESD--AMLALDNLLQGQE  143 (237)
T ss_dssp             HHTTCCEEEEECCTT-SHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHSTT
T ss_pred             HhhCCCEEEEeCCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHhccC
Confidence            345678999998864 777778888763 2399999999988877754    4553211111122  434443332    


Q ss_pred             -CCCccEEEEccCC---hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          256 -NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       256 -~~~~d~vid~~g~---~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                       .+.||+||-....   ...++.+.+.|+++ |.++.-..
T Consensus       144 ~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pG-G~lv~d~~  182 (237)
T 3c3y_A          144 SEGSYDFGFVDADKPNYIKYHERLMKLVKVG-GIVAYDNT  182 (237)
T ss_dssp             CTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEECT
T ss_pred             CCCCcCEEEECCchHHHHHHHHHHHHhcCCC-eEEEEecC
Confidence             3479999865432   35678899999997 98877543

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=96.07  E-value=0.013  Score=50.99  Aligned_cols=78  Identities=18%  Similarity=0.239  Sum_probs=49.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHHHHH----HhcCCce-ee--cCCCCCccHHHHHHHHc--C
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT--N  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~-~~~~~~~~----~~lg~~~-vi--~~~~~~~~~~~~~~~~~--~  256 (373)
                      .+++|||+|+ |.+|.+.+..+...|+ +|+++++ ++++.+.+    ++.+... ++  |..+. ..+.+.+.+..  -
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   83 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVE-SDVINLVQSAIKEF   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHHc
Confidence            3678999987 8999999998888999 7888888 66554433    2234322 22  22221 11222222221  1


Q ss_pred             CCccEEEEccC
Q 017336          257 GGVDRSVECTG  267 (373)
Q Consensus       257 ~~~d~vid~~g  267 (373)
                      +++|++|++.|
T Consensus        84 g~id~li~~Ag   94 (261)
T 1gee_A           84 GKLDVMINNAG   94 (261)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999987

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=96.07  E-value=0.022  Score=48.32  Aligned_cols=103  Identities=17%  Similarity=0.137  Sum_probs=68.3

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcC---
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN---  256 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~---  256 (373)
                      ...++++||-+|+|. |..++.+++.++ ..+|++++.+++..+.+++    .|...-+.....+  ..+.+.....   
T Consensus        61 ~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~~~~~~~~~~  137 (225)
T 3tr6_A           61 KLMQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSP--AKDTLAELIHAGQ  137 (225)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC--HHHHHHHHHTTTC
T ss_pred             HhhCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCC--HHHHHHHhhhccC
Confidence            445778999999875 778888888763 3499999999988877765    3543211111122  3344433332   


Q ss_pred             -CCccEEEEccCC---hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          257 -GGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       257 -~~~d~vid~~g~---~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                       +.||+|+-....   ...+..+.+.|+++ |.++....
T Consensus       138 ~~~fD~v~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  175 (225)
T 3tr6_A          138 AWQYDLIYIDADKANTDLYYEESLKLLREG-GLIAVDNV  175 (225)
T ss_dssp             TTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEECS
T ss_pred             CCCccEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEeCC
Confidence             479999854432   24678889999997 99987544

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=96.06  E-value=0.02  Score=53.44  Aligned_cols=85  Identities=24%  Similarity=0.220  Sum_probs=54.7

Q ss_pred             ccCC-CCCCEEEEECC-CHHHHHHHHHHHH-cCCcEEEEEcCChhH----------------HHHHHhcCCcee-e--cC
Q 017336          183 VAKP-ERGSSVAVFGL-GAVGLAAAEGARI-AGASRIIGVDRSSKR----------------FEEAKKFGVTDF-V--NT  240 (373)
Q Consensus       183 ~~~~-~~~~~vlI~G~-g~~G~~ai~la~~-~g~~~V~~~~~~~~~----------------~~~~~~lg~~~v-i--~~  240 (373)
                      ...+ +.++++||+|+ +++|++++..+.. .|+ +|++++++.+.                .+.+++.|.... +  |.
T Consensus        54 ~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA-~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dv  132 (422)
T 3s8m_A           54 RGVRNDGPKKVLVIGASSGYGLASRITAAFGFGA-DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDA  132 (422)
T ss_dssp             TCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred             ccccccCCCEEEEECCChHHHHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecC
Confidence            3445 46889999987 7999998887777 999 88888765432                144556675432 2  22


Q ss_pred             CCCC--ccHHHHHHHHcCCCccEEEEccCC
Q 017336          241 SEHD--RPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       241 ~~~~--~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      .+.+  ..+.+.+.+..+|++|+++++.|.
T Consensus       133 td~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          133 FSDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             TSHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            2211  123344445553589999998875

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=96.06  E-value=0.015  Score=50.94  Aligned_cols=79  Identities=23%  Similarity=0.379  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-C-HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce--e--ecCCCCC--ccHHHHHHHHc
Q 017336          188 RGSSVAVFGL-G-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD--F--VNTSEHD--RPIQEVIAEMT  255 (373)
Q Consensus       188 ~~~~vlI~G~-g-~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~--v--i~~~~~~--~~~~~~~~~~~  255 (373)
                      .++++||+|+ | ++|.+.+..+...|+ +|++++++.++.+.+.    +.+...  +  .|..+.+  ..+.+.+.+..
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            4789999997 6 799999999888999 8999999887755443    223211  2  2322211  01222232322


Q ss_pred             CCCccEEEEccCC
Q 017336          256 NGGVDRSVECTGN  268 (373)
Q Consensus       256 ~~~~d~vid~~g~  268 (373)
                       +++|++|++.|.
T Consensus       100 -g~id~li~~Ag~  111 (266)
T 3o38_A          100 -GRLDVLVNNAGL  111 (266)
T ss_dssp             -SCCCEEEECCCC
T ss_pred             -CCCcEEEECCCc
Confidence             379999999883

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=96.06  E-value=0.023  Score=50.31  Aligned_cols=34  Identities=32%  Similarity=0.315  Sum_probs=30.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|++++++
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~   44 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDIC   44 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEecc
Confidence            5789999987 8999999999999999 89888776

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.05  E-value=0.0074  Score=52.39  Aligned_cols=100  Identities=22%  Similarity=0.266  Sum_probs=68.8

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc-e--eecCCCCCccHHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-D--FVNTSEHDRPIQEVIA  252 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~-~--vi~~~~~~~~~~~~~~  252 (373)
                      +.....+.++.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++    .|.. .  ++..+-.+  +     
T Consensus        28 l~~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~--~-----   98 (256)
T 1nkv_A           28 LGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG--Y-----   98 (256)
T ss_dssp             HHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT--C-----
T ss_pred             HHHhcCCCCCCEEEEECCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHh--C-----
Confidence            34556788999999999876 7788889988887 89999999988777754    3432 1  22111111  0     


Q ss_pred             HHcCCCccEEEEcc------CChHhHHHHHHHhhcCCcEEEEEc
Q 017336          253 EMTNGGVDRSVECT------GNIDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       253 ~~~~~~~d~vid~~------g~~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                       ...+.||+|+...      .....+..+.+.|+|+ |++++..
T Consensus        99 -~~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~~~~  140 (256)
T 1nkv_A           99 -VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGE  140 (256)
T ss_dssp             -CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEE
T ss_pred             -CcCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCC-eEEEEec
Confidence             0124799999632      2235688889999997 9988754

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.04  E-value=0.013  Score=51.66  Aligned_cols=76  Identities=22%  Similarity=0.284  Sum_probs=56.0

Q ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          187 ERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       187 ~~~~~vlI~G~g-~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      -.|++++|+|.| .+|..+++++...|+ +|+++.+..                   .+  +.    +.+. .+|+||.+
T Consensus       158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gA-tVtv~h~~t-------------------~~--L~----~~~~-~ADIVI~A  210 (285)
T 3p2o_A          158 LEGKDAVIIGASNIVGRPMATMLLNAGA-TVSVCHIKT-------------------KD--LS----LYTR-QADLIIVA  210 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC-------------------SC--HH----HHHT-TCSEEEEC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCc-------------------hh--HH----HHhh-cCCEEEEC
Confidence            489999999985 589999999999999 788875421                   11  22    2222 58999999


Q ss_pred             cCChHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          266 TGNIDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       266 ~g~~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      +|.+.++.  -+.++++ ..++.+|..
T Consensus       211 vg~p~~I~--~~~vk~G-avVIDVgi~  234 (285)
T 3p2o_A          211 AGCVNLLR--SDMVKEG-VIVVDVGIN  234 (285)
T ss_dssp             SSCTTCBC--GGGSCTT-EEEEECCCE
T ss_pred             CCCCCcCC--HHHcCCC-eEEEEeccC
Confidence            99865543  3567886 888888764

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.04  E-value=0.04  Score=48.47  Aligned_cols=79  Identities=23%  Similarity=0.298  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH-----------HHHHHhcCCcee---ecCCCCC--ccHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-----------FEEAKKFGVTDF---VNTSEHD--RPIQEV  250 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~-----------~~~~~~lg~~~v---i~~~~~~--~~~~~~  250 (373)
                      .++++||+|+ +++|.++++.+...|+ +|+.++++.++           .+.+++.+....   .|..+.+  ..+.+.
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            4689999987 8999999999989999 89999887542           122233344321   2322211  012222


Q ss_pred             HHHHcCCCccEEEEccCC
Q 017336          251 IAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       251 ~~~~~~~~~d~vid~~g~  268 (373)
                      +.+.. +++|+++++.|.
T Consensus        84 ~~~~~-g~iD~lvnnAG~  100 (274)
T 3e03_A           84 TVDTF-GGIDILVNNASA  100 (274)
T ss_dssp             HHHHH-SCCCEEEECCCC
T ss_pred             HHHHc-CCCCEEEECCCc
Confidence            32322 379999999884

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=96.04  E-value=0.031  Score=50.51  Aligned_cols=79  Identities=27%  Similarity=0.302  Sum_probs=49.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCC----------hhHHH----HHHhcCCceee-cCCCCCc-cH---
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS----------SKRFE----EAKKFGVTDFV-NTSEHDR-PI---  247 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~----------~~~~~----~~~~lg~~~vi-~~~~~~~-~~---  247 (373)
                      .++++||+|+ |++|.+.+..+...|+ +|++++++          .++.+    .+++.+..... ..+-.+. .+   
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            5789999987 8999999999889999 89998776          33332    23334543322 1111111 12   


Q ss_pred             HHHHHHHcCCCccEEEEccCC
Q 017336          248 QEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       248 ~~~~~~~~~~~~d~vid~~g~  268 (373)
                      .+.+.+.. +++|++|++.|.
T Consensus       105 ~~~~~~~~-g~iD~lv~nAg~  124 (322)
T 3qlj_A          105 IQTAVETF-GGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHH-SCCCEEECCCCC
T ss_pred             HHHHHHHc-CCCCEEEECCCC
Confidence            22222222 379999999884

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.04  E-value=0.013  Score=50.84  Aligned_cols=75  Identities=21%  Similarity=0.348  Sum_probs=48.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHc--CCCccEEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRSV  263 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~--~~~~d~vi  263 (373)
                      .++++||+|+ |++|.+.+..+...|+ +|++++++.+.    ++.++..+ .|..+.+ .+.+.+.+..  -+++|++|
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~----~~~~~~~~~~D~~d~~-~~~~~~~~~~~~~g~id~lv   79 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQ----EQYPFATEVMDVADAA-QVAQVCQRLLAETERLDALV   79 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCS----SCCSSEEEECCTTCHH-HHHHHHHHHHHHCSCCCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhh----hcCCceEEEcCCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence            4688999987 8999999999999999 89988887652    23343222 2332211 1222222221  13799999


Q ss_pred             EccCC
Q 017336          264 ECTGN  268 (373)
Q Consensus       264 d~~g~  268 (373)
                      ++.|.
T Consensus        80 ~~Ag~   84 (250)
T 2fwm_X           80 NAAGI   84 (250)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99874

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.03  E-value=0.013  Score=51.55  Aligned_cols=94  Identities=20%  Similarity=0.243  Sum_probs=61.8

Q ss_pred             cccchhhhhhhhhhccCCCCCCEEEEECCC-HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccH
Q 017336          169 LSCGVSTGLGATLNVAKPERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPI  247 (373)
Q Consensus       169 ~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g-~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~  247 (373)
                      +||....+...+.+..---.|++++|+|.| .+|..+++++...|+ +|+++.+..                   .+  +
T Consensus       141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~t-------------------~~--L  198 (285)
T 3l07_A          141 ESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKA-TVTTCHRFT-------------------TD--L  198 (285)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC-------------------SS--H
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc-------------------hh--H
Confidence            344444444333222223478999999985 589999999999999 787774321                   11  2


Q ss_pred             HHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          248 QEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       248 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      .    +... .+|+||.++|.+.++.  -+.++++ ..++.+|..
T Consensus       199 ~----~~~~-~ADIVI~Avg~p~~I~--~~~vk~G-avVIDvgi~  235 (285)
T 3l07_A          199 K----SHTT-KADILIVAVGKPNFIT--ADMVKEG-AVVIDVGIN  235 (285)
T ss_dssp             H----HHHT-TCSEEEECCCCTTCBC--GGGSCTT-CEEEECCCE
T ss_pred             H----Hhcc-cCCEEEECCCCCCCCC--HHHcCCC-cEEEEeccc
Confidence            2    2222 5899999999865543  3567886 888888764

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=96.03  E-value=0.017  Score=50.80  Aligned_cols=79  Identities=23%  Similarity=0.196  Sum_probs=49.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHHHHH----HhcCCce-ee--cCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTD-FV--NTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~-~~~~~~~~----~~lg~~~-vi--~~~~~~--~~~~~~~~~~~~  256 (373)
                      .++++||+|+ |++|.++++.+...|+ +|+++++ +.++.+.+    ++.+... .+  |..+.+  ..+.+.+.+.. 
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~-  104 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW-  104 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            4689999987 8999999999999999 7877766 55444433    3344432 22  322211  01222222322 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|++.|.
T Consensus       105 g~id~lv~nAg~  116 (269)
T 4dmm_A          105 GRLDVLVNNAGI  116 (269)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999874

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=96.02  E-value=0.032  Score=47.91  Aligned_cols=96  Identities=15%  Similarity=0.109  Sum_probs=65.6

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid  264 (373)
                      .++++++||=+|+|. |..+..+++. |+ +|++++.+++..+.+++. .. ++   ..+  ..+.+..+..+.||+|+.
T Consensus        38 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~-~~-~~---~~d--~~~~~~~~~~~~fD~i~~  107 (240)
T 3dli_A           38 YFKGCRRVLDIGCGR-GEFLELCKEE-GI-ESIGVDINEDMIKFCEGK-FN-VV---KSD--AIEYLKSLPDKYLDGVMI  107 (240)
T ss_dssp             GTTTCSCEEEETCTT-THHHHHHHHH-TC-CEEEECSCHHHHHHHHTT-SE-EE---CSC--HHHHHHTSCTTCBSEEEE
T ss_pred             hhcCCCeEEEEeCCC-CHHHHHHHhC-CC-cEEEEECCHHHHHHHHhh-cc-ee---ecc--HHHHhhhcCCCCeeEEEE
Confidence            457789999999864 5555566655 87 799999999999988876 22 22   111  333333334458999997


Q ss_pred             cc-----CC---hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          265 CT-----GN---IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       265 ~~-----g~---~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..     ..   ...+..+.+.|+++ |.+++...
T Consensus       108 ~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  141 (240)
T 3dli_A          108 SHFVEHLDPERLFELLSLCYSKMKYS-SYIVIESP  141 (240)
T ss_dssp             ESCGGGSCGGGHHHHHHHHHHHBCTT-CCEEEEEE
T ss_pred             CCchhhCCcHHHHHHHHHHHHHcCCC-cEEEEEeC
Confidence            42     22   35688999999997 99887543

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=96.01  E-value=0.035  Score=50.07  Aligned_cols=34  Identities=24%  Similarity=0.305  Sum_probs=29.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      .++++||+|+ |++|.++++.+...|+ +|++++++
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~   79 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLC   79 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecc
Confidence            5789999987 8999999999999999 88888765

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=96.01  E-value=0.018  Score=50.99  Aligned_cols=79  Identities=24%  Similarity=0.296  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~  257 (373)
                      .++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+    ++.+... .  .|..+. ..+.+.+.+..  .+
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~~~~  120 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKK-EEISEVINKILTEHK  120 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCH-HHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCH-HHHHHHHHHHHHhcC
Confidence            3678999987 8999999998888898 788888887665443    2234432 2  232221 11222222221  23


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus       121 ~id~li~~Ag~  131 (285)
T 2c07_A          121 NVDILVNNAGI  131 (285)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.01  E-value=0.028  Score=51.14  Aligned_cols=90  Identities=22%  Similarity=0.276  Sum_probs=66.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      -.+++|.|+|.|.+|...++.++.+|. +|++.+++.++ +.+.++|+...      +  +.    +... ..|+|+.++
T Consensus       163 l~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~------~--l~----ell~-~aDvV~l~~  227 (335)
T 2g76_A          163 LNGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISP-EVSASFGVQQL------P--LE----EIWP-LCDFITVHT  227 (335)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCH-HHHHHTTCEEC------C--HH----HHGG-GCSEEEECC
T ss_pred             CCcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCceeC------C--HH----HHHh-cCCEEEEec
Confidence            357899999999999999999999999 89999887665 45667786421      1  32    2222 579999987


Q ss_pred             CChH----hH-HHHHHHhhcCCcEEEEEcCC
Q 017336          267 GNID----NM-ISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       267 g~~~----~~-~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ...+    .+ ...+..|+++ +.++.++..
T Consensus       228 P~t~~t~~li~~~~l~~mk~g-ailIN~arg  257 (335)
T 2g76_A          228 PLLPSTTGLLNDNTFAQCKKG-VRVVNCARG  257 (335)
T ss_dssp             CCCTTTTTSBCHHHHTTSCTT-EEEEECSCT
T ss_pred             CCCHHHHHhhCHHHHhhCCCC-cEEEECCCc
Confidence            7532    22 4677888996 888888763

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=96.00  E-value=0.041  Score=48.61  Aligned_cols=79  Identities=20%  Similarity=0.245  Sum_probs=49.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHHHHHH----hc-CCce-ee--cCCCCC--ccHHHHHHHHc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEAK----KF-GVTD-FV--NTSEHD--RPIQEVIAEMT  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~-~~~~~~~~~----~l-g~~~-vi--~~~~~~--~~~~~~~~~~~  255 (373)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++ ++++.+.+.    +. +... .+  |..+.+  ..+.+.+.+..
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  102 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF  102 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence            3689999987 8999999999999999 8999888 444444332    22 3222 12  222211  01222232332


Q ss_pred             CCCccEEEEccCC
Q 017336          256 NGGVDRSVECTGN  268 (373)
Q Consensus       256 ~~~~d~vid~~g~  268 (373)
                       +++|+++++.|.
T Consensus       103 -g~iD~lv~nAg~  114 (281)
T 3v2h_A          103 -GGADILVNNAGV  114 (281)
T ss_dssp             -SSCSEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             379999999884

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=96.00  E-value=0.055  Score=47.69  Aligned_cols=91  Identities=18%  Similarity=0.192  Sum_probs=61.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCc-EEEEEcCChhHHHHHHhcCCce-eecCCCCCccHHHHHHHHcCC-CccEEEEcc
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNG-GVDRSVECT  266 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~-~V~~~~~~~~~~~~~~~lg~~~-vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~  266 (373)
                      .+|.|+|+|.+|.+.++.++..|.. +|+++++++++.+.++++|... ...  +    ..    +.. . ..|+||.|+
T Consensus         2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~--~----~~----~~~-~~~aDvVilav   70 (281)
T 2g5c_A            2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTT--S----IA----KVE-DFSPDFVMLSS   70 (281)
T ss_dssp             CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEES--C----GG----GGG-GTCCSEEEECS
T ss_pred             cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccC--C----HH----HHh-cCCCCEEEEcC
Confidence            3689999999999999998888852 6999999999988888888642 111  1    10    111 2 579999999


Q ss_pred             CChHhH---HHHHHHhhcCCcEEEEEcCC
Q 017336          267 GNIDNM---ISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       267 g~~~~~---~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ......   ......++++ ..++.++..
T Consensus        71 p~~~~~~v~~~l~~~l~~~-~iv~~~~~~   98 (281)
T 2g5c_A           71 PVRTFREIAKKLSYILSED-ATVTDQGSV   98 (281)
T ss_dssp             CHHHHHHHHHHHHHHSCTT-CEEEECCSC
T ss_pred             CHHHHHHHHHHHHhhCCCC-cEEEECCCC
Confidence            864322   2233445564 666655543

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=96.00  E-value=0.017  Score=50.70  Aligned_cols=97  Identities=21%  Similarity=0.248  Sum_probs=64.2

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHc---CCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcCCC
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIA---GASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGG  258 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~---g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~~~  258 (373)
                      ++++.+||=+|+|. |..+..+++..   |+ +|++++.+++.++.+++    .+...-+.....+      +.++.-+.
T Consensus        68 ~~~~~~vLDlGcGt-G~~~~~la~~~~~~~~-~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D------~~~~~~~~  139 (261)
T 4gek_A           68 VQPGTQVYDLGCSL-GAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGD------IRDIAIEN  139 (261)
T ss_dssp             CCTTCEEEEETCTT-THHHHHHHHTCCSSSC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC------TTTCCCCS
T ss_pred             CCCCCEEEEEeCCC-CHHHHHHHHhcCCCCC-EEEEEECCHHHHHHHHHHHHhhccCceEEEeecc------cccccccc
Confidence            78999999999875 77777888765   56 89999999988877764    3432111111111      11122236


Q ss_pred             ccEEEEccCC--------hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          259 VDRSVECTGN--------IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       259 ~d~vid~~g~--------~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      +|+|+....-        ...+....+.|+|+ |++++...
T Consensus       140 ~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpG-G~lii~e~  179 (261)
T 4gek_A          140 ASMVVLNFTLQFLEPSERQALLDKIYQGLNPG-GALVLSEK  179 (261)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cccceeeeeeeecCchhHhHHHHHHHHHcCCC-cEEEEEec
Confidence            8988764321        13578899999997 99987643

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.99  E-value=0.0077  Score=55.96  Aligned_cols=90  Identities=14%  Similarity=0.058  Sum_probs=64.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .+++|.|+|.|.+|...++.++.+|. +|++.+++..+.+..+++|+..+   .  +  +.    ++.. ..|+|+.++.
T Consensus       190 ~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~~~~~~G~~~~---~--~--l~----ell~-~aDvV~l~~P  256 (393)
T 2nac_A          190 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH---A--T--RE----DMYP-VCDVVTLNCP  256 (393)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC---S--S--HH----HHGG-GCSEEEECSC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcCCccchhhHhhcCceec---C--C--HH----HHHh-cCCEEEEecC
Confidence            57899999999999999999999999 89999887666666677776431   1  1  22    2222 4788888876


Q ss_pred             Ch----HhH-HHHHHHhhcCCcEEEEEcC
Q 017336          268 NI----DNM-ISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       268 ~~----~~~-~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..    ..+ ...+..|+++ ..++.++.
T Consensus       257 lt~~t~~li~~~~l~~mk~g-ailIN~aR  284 (393)
T 2nac_A          257 LHPETEHMINDETLKLFKRG-AYIVNTAR  284 (393)
T ss_dssp             CCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             CchHHHHHhhHHHHhhCCCC-CEEEECCC
Confidence            32    122 3566778886 77777764

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=95.98  E-value=0.04  Score=50.08  Aligned_cols=88  Identities=17%  Similarity=0.266  Sum_probs=64.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .+++|.|+|.|.+|...++.++..|. +|++.+++.++ +.+.++|+..    .  +  +.+.+.     ..|+|+.++.
T Consensus       149 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~----~--~--l~~~l~-----~aDvVil~vp  213 (334)
T 2dbq_A          149 YGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTRKE-EVERELNAEF----K--P--LEDLLR-----ESDFVVLAVP  213 (334)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHHCCEE----C--C--HHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCcch-hhHhhcCccc----C--C--HHHHHh-----hCCEEEECCC
Confidence            57899999999999999999999999 89999988777 6666667531    1  1  333232     3699999887


Q ss_pred             ChH----hH-HHHHHHhhcCCcEEEEEcC
Q 017336          268 NID----NM-ISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       268 ~~~----~~-~~~~~~l~~~~g~~v~~g~  291 (373)
                      ...    .+ ...+..|+++ ..++.++.
T Consensus       214 ~~~~t~~~i~~~~~~~mk~~-ailIn~sr  241 (334)
T 2dbq_A          214 LTRETYHLINEERLKLMKKT-AILINIAR  241 (334)
T ss_dssp             CCTTTTTCBCHHHHHHSCTT-CEEEECSC
T ss_pred             CChHHHHhhCHHHHhcCCCC-cEEEECCC
Confidence            543    22 3566778886 77776653

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=95.96  E-value=0.02  Score=51.61  Aligned_cols=98  Identities=14%  Similarity=0.129  Sum_probs=64.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC------C--ceeecCCCCCccHHHHHHHHcCCC
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG------V--TDFVNTSEHDRPIQEVIAEMTNGG  258 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg------~--~~vi~~~~~~~~~~~~~~~~~~~~  258 (373)
                      ..+++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-      .  +.+ .....+  ..+.+.. ..+.
T Consensus       107 ~~~~~VLdIG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv-~~~~~D--~~~~l~~-~~~~  181 (314)
T 2b2c_A          107 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKL-DLFCGD--GFEFLKN-HKNE  181 (314)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTE-EEECSC--HHHHHHH-CTTC
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCE-EEEECh--HHHHHHh-cCCC
Confidence            3458999998864 666677777655459999999999888887631      1  111 111122  4444433 3348


Q ss_pred             ccEEEEccCC----------hHhHHHHHHHhhcCCcEEEEEc
Q 017336          259 VDRSVECTGN----------IDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       259 ~d~vid~~g~----------~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      ||+|+.-...          .+++..+.+.|+++ |.++.-.
T Consensus       182 fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~Lkpg-G~lv~~~  222 (314)
T 2b2c_A          182 FDVIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQG  222 (314)
T ss_dssp             EEEEEECCC-------------HHHHHHHHEEEE-EEEEEEC
T ss_pred             ceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCC-eEEEEEC
Confidence            9999854321          36788999999997 9988764

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=95.96  E-value=0.063  Score=49.01  Aligned_cols=133  Identities=11%  Similarity=0.073  Sum_probs=80.5

Q ss_pred             EEEEECCCHHHHH-HHHHHHHc-CCcEEEEEcCChhHHH-HHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          191 SVAVFGLGAVGLA-AAEGARIA-GASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       191 ~vlI~G~g~~G~~-ai~la~~~-g~~~V~~~~~~~~~~~-~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      +|.|+|+|.+|.. .+...+.. +++-+.++++++++.+ .++++|+..++..      +.+.+.   ...+|+|+.|+.
T Consensus        25 rigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d------~~ell~---~~~iDaV~I~tP   95 (350)
T 4had_A           25 RFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGS------YEEMLA---SDVIDAVYIPLP   95 (350)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESS------HHHHHH---CSSCSEEEECSC
T ss_pred             EEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCC------HHHHhc---CCCCCEEEEeCC
Confidence            6899999999975 35555544 6733445577766644 4567888765421      333332   237999999999


Q ss_pred             ChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccch--hhc--ccceEEEEeccCCCCCCCHHHHHHHHHcCCC
Q 017336          268 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI--NVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  337 (373)
Q Consensus       268 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~--~~~--~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l  337 (373)
                      ...+.+.+..+|..  |+=|++..+-.. +..-...  ...  +++.+.-..  .++....++.+-+++++|.+
T Consensus        96 ~~~H~~~~~~al~a--GkhVl~EKPla~-~~~ea~~l~~~a~~~~~~l~v~~--~~R~~p~~~~~k~~i~~G~i  164 (350)
T 4had_A           96 TSQHIEWSIKAADA--GKHVVCEKPLAL-KAGDIDAVIAARDRNKVVVTEAY--MITYSPVWQKVRSLIDEGAI  164 (350)
T ss_dssp             GGGHHHHHHHHHHT--TCEEEECSCCCS-SGGGGHHHHHHHHHHTCCEEECC--GGGGSHHHHHHHHHHHTTTT
T ss_pred             CchhHHHHHHHHhc--CCEEEEeCCccc-chhhHHHHHHHHHHcCCceeEee--eeecCHHHHHhhHhhhcCCC
Confidence            88889999999987  566777554311 1111111  111  333332222  22333357788888888865

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=95.94  E-value=0.006  Score=53.11  Aligned_cols=92  Identities=21%  Similarity=0.260  Sum_probs=57.0

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHc---CCCccEEEEc
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT---NGGVDRSVEC  265 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~---~~~~d~vid~  265 (373)
                      +++||+|+ |.+|.++++.+...|+ +|+++++++++.+.      ....|..     -.+.+++..   .+++|++|++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~------~~~~Dl~-----~~~~v~~~~~~~~~~id~lv~~   69 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAEVIA------DLSTAEG-----RKQAIADVLAKCSKGMDGLVLC   69 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------CTTSHHH-----HHHHHHHHHTTCTTCCSEEEEC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhhcc------ccccCCC-----CHHHHHHHHHHhCCCCCEEEEC
Confidence            47999987 8999999999989999 89998887654211      0000100     011222222   2478999999


Q ss_pred             cCChH------------------hHHHHHHHhhc-CCcEEEEEcCCC
Q 017336          266 TGNID------------------NMISAFECVHD-GWGVAVLVGVPS  293 (373)
Q Consensus       266 ~g~~~------------------~~~~~~~~l~~-~~g~~v~~g~~~  293 (373)
                      .|...                  ..+.+++.|.. +.|+++.+++..
T Consensus        70 Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~  116 (257)
T 1fjh_A           70 AGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVA  116 (257)
T ss_dssp             CCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGG
T ss_pred             CCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChh
Confidence            87522                  13344555543 237999988753

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=95.92  E-value=0.015  Score=53.59  Aligned_cols=91  Identities=16%  Similarity=0.188  Sum_probs=65.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .+++|.|+|.|.+|...++.++.+|+++|++.+++..+.+.+.++|+..+   .  +  +.+.+.     ..|+|+.++.
T Consensus       163 ~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~---~--~--l~ell~-----~aDvV~l~~P  230 (364)
T 2j6i_A          163 EGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRV---E--N--IEELVA-----QADIVTVNAP  230 (364)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEEC---S--S--HHHHHH-----TCSEEEECCC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEec---C--C--HHHHHh-----cCCEEEECCC
Confidence            67899999999999999999999999339999887766666777776432   1  1  322221     4799999877


Q ss_pred             Ch----HhH-HHHHHHhhcCCcEEEEEcC
Q 017336          268 NI----DNM-ISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       268 ~~----~~~-~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..    ..+ ...+..|+++ +.++.++.
T Consensus       231 ~t~~t~~li~~~~l~~mk~g-a~lIn~ar  258 (364)
T 2j6i_A          231 LHAGTKGLINKELLSKFKKG-AWLVNTAR  258 (364)
T ss_dssp             CSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred             CChHHHHHhCHHHHhhCCCC-CEEEECCC
Confidence            53    122 3566788886 77877765

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=95.92  E-value=0.017  Score=50.62  Aligned_cols=73  Identities=21%  Similarity=0.259  Sum_probs=47.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHH---HHcCCCccEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIA---EMTNGGVDRS  262 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~---~~~~~~~d~v  262 (373)
                      .++++||+|+ |++|.+++..+...|+ +|+++++++++     .-.+..+ .|..+.+ .+.+.+.   +.. +++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-----~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~-g~iD~l   78 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG-----EAKYDHIECDVTNPD-QVKASIDHIFKEY-GSISVL   78 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC-----SCSSEEEECCTTCHH-HHHHHHHHHHHHH-SCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc-----CCceEEEEecCCCHH-HHHHHHHHHHHHc-CCCCEE
Confidence            3688999987 8999999999999999 89988887654     1112211 2322211 1222222   222 379999


Q ss_pred             EEccCC
Q 017336          263 VECTGN  268 (373)
Q Consensus       263 id~~g~  268 (373)
                      |++.|.
T Consensus        79 v~~Ag~   84 (264)
T 2dtx_A           79 VNNAGI   84 (264)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=95.92  E-value=0.03  Score=49.37  Aligned_cols=33  Identities=33%  Similarity=0.347  Sum_probs=29.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR  221 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~  221 (373)
                      .++++||+|+ +++|.++++.+...|+ +|+++++
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r   43 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDI   43 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEec
Confidence            4789999987 8999999999999999 8988877

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=95.91  E-value=0.018  Score=50.15  Aligned_cols=76  Identities=21%  Similarity=0.363  Sum_probs=48.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-e--ecCCCCC--ccHHHHHHHHcCCCccE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-F--VNTSEHD--RPIQEVIAEMTNGGVDR  261 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~-v--i~~~~~~--~~~~~~~~~~~~~~~d~  261 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|++++++.++  ..++++... .  .|..+.+  ..+.+.+.+  -+++|+
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~--~g~id~   82 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGED--VVADLGDRARFAAADVTDEAAVASALDLAET--MGTLRI   82 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCHH--HHHHTCTTEEEEECCTTCHHHHHHHHHHHHH--HSCEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchHH--HHHhcCCceEEEECCCCCHHHHHHHHHHHHH--hCCCCE
Confidence            4688999987 8999999999889999 88888875443  334455432 2  2322211  012222222  247999


Q ss_pred             EEEccCC
Q 017336          262 SVECTGN  268 (373)
Q Consensus       262 vid~~g~  268 (373)
                      ++++.|.
T Consensus        83 lv~nAg~   89 (257)
T 3tl3_A           83 VVNCAGT   89 (257)
T ss_dssp             EEECGGG
T ss_pred             EEECCCC
Confidence            9999883

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=95.91  E-value=0.031  Score=51.20  Aligned_cols=89  Identities=18%  Similarity=0.204  Sum_probs=63.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .|++|.|+|.|.+|...++.++.+|. +|++.+++. +.+.+.+.|+..+    + +  +.+.+.     ..|+|+.++.
T Consensus       159 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~~~~~g~~~~----~-~--l~ell~-----~aDiV~l~~P  224 (352)
T 3gg9_A          159 KGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGREN-SKERARADGFAVA----E-S--KDALFE-----QSDVLSVHLR  224 (352)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSHH-HHHHHHHTTCEEC----S-S--HHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECCCC-CHHHHHhcCceEe----C-C--HHHHHh-----hCCEEEEecc
Confidence            57899999999999999999999999 899998765 4455667776432    1 1  333332     3689888876


Q ss_pred             ChH-----hHHHHHHHhhcCCcEEEEEcC
Q 017336          268 NID-----NMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       268 ~~~-----~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..+     .-...+..|+++ ..++.++.
T Consensus       225 lt~~t~~li~~~~l~~mk~g-ailIN~aR  252 (352)
T 3gg9_A          225 LNDETRSIITVADLTRMKPT-ALFVNTSR  252 (352)
T ss_dssp             CSTTTTTCBCHHHHTTSCTT-CEEEECSC
T ss_pred             CcHHHHHhhCHHHHhhCCCC-cEEEECCC
Confidence            321     123667788886 88888774

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.90  E-value=0.015  Score=51.62  Aligned_cols=77  Identities=19%  Similarity=0.206  Sum_probs=56.7

Q ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          187 ERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       187 ~~~~~vlI~G~g-~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      -.+++++|+|.| .+|.-+++++...|+ +|+++.+..                   .+  +.+    .+. .+|+||.+
T Consensus       163 l~gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~t-------------------~~--L~~----~~~-~ADIVI~A  215 (301)
T 1a4i_A          163 IAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKT-------------------AH--LDE----EVN-KGDILVVA  215 (301)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC-------------------SS--HHH----HHT-TCSEEEEC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEECCc-------------------cc--HHH----Hhc-cCCEEEEC
Confidence            478999999997 689999999999999 788874321                   11  322    222 58999999


Q ss_pred             cCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          266 TGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       266 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +|.+.++.  -+.++++ ..++.+|...
T Consensus       216 vg~p~~I~--~~~vk~G-avVIDVgi~~  240 (301)
T 1a4i_A          216 TGQPEMVK--GEWIKPG-AIVIDCGINY  240 (301)
T ss_dssp             CCCTTCBC--GGGSCTT-CEEEECCCBC
T ss_pred             CCCcccCC--HHHcCCC-cEEEEccCCC
Confidence            99976533  3447886 8888888753

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=95.89  E-value=0.085  Score=47.23  Aligned_cols=90  Identities=16%  Similarity=0.103  Sum_probs=63.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      ..+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+...   .  +  ..+.+.     ..|+||.++..
T Consensus         9 ~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~---~--~--~~e~~~-----~aDvVi~~vp~   75 (306)
T 3l6d_A            9 EFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAAGAHLC---E--S--VKAALS-----ASPATIFVLLD   75 (306)
T ss_dssp             SCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTCEEC---S--S--HHHHHH-----HSSEEEECCSS
T ss_pred             CCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeec---C--C--HHHHHh-----cCCEEEEEeCC
Confidence            4679999999999999999888998 79999999999988888776321   1  1  333332     36999999987


Q ss_pred             hHhHHHHH-----HHhhcCCcEEEEEcCC
Q 017336          269 IDNMISAF-----ECVHDGWGVAVLVGVP  292 (373)
Q Consensus       269 ~~~~~~~~-----~~l~~~~g~~v~~g~~  292 (373)
                      +..+...+     ..+.++ ..++.++..
T Consensus        76 ~~~~~~v~~~~~l~~~~~g-~ivid~st~  103 (306)
T 3l6d_A           76 NHATHEVLGMPGVARALAH-RTIVDYTTN  103 (306)
T ss_dssp             HHHHHHHHTSTTHHHHTTT-CEEEECCCC
T ss_pred             HHHHHHHhcccchhhccCC-CEEEECCCC
Confidence            65444333     334554 566665544

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=95.89  E-value=0.042  Score=49.60  Aligned_cols=78  Identities=23%  Similarity=0.268  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC---------ChhHHHH----HHhcCCceeecCCCCCc--cHHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR---------SSKRFEE----AKKFGVTDFVNTSEHDR--PIQEVI  251 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~---------~~~~~~~----~~~lg~~~vi~~~~~~~--~~~~~~  251 (373)
                      .++++||+|+ |++|..+++.+...|+ +|+++++         +.++.+.    +++.+...+.|..+...  .+.+.+
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~   86 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA   86 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHH
Confidence            4688999987 8999999999989999 7888643         4444332    23345444455444321  122333


Q ss_pred             HHHcCCCccEEEEccC
Q 017336          252 AEMTNGGVDRSVECTG  267 (373)
Q Consensus       252 ~~~~~~~~d~vid~~g  267 (373)
                      .+.. +++|++|++.|
T Consensus        87 ~~~~-g~iD~lVnnAG  101 (319)
T 1gz6_A           87 LDTF-GRIDVVVNNAG  101 (319)
T ss_dssp             HHHT-SCCCEEEECCC
T ss_pred             HHHc-CCCCEEEECCC
Confidence            3332 37999999987

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=95.89  E-value=0.027  Score=51.07  Aligned_cols=41  Identities=22%  Similarity=0.160  Sum_probs=34.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEc-CChhHHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEEA  229 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~-~~~~~~~~~  229 (373)
                      .++++||+|+ |++|.++++.+...|+ +|++++ +++++.+.+
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~   87 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL   87 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHH
Confidence            4688999987 8999999999999999 899888 887765544

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.89  E-value=0.017  Score=51.16  Aligned_cols=96  Identities=17%  Similarity=0.189  Sum_probs=62.3

Q ss_pred             cccchhhhhhhhhhccCCCCCCEEEEECCC-HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccH
Q 017336          169 LSCGVSTGLGATLNVAKPERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPI  247 (373)
Q Consensus       169 ~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g-~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~  247 (373)
                      +||....+...|.+..---.|++++|+|.| .+|..+++++...|+ +|+++.+....                     +
T Consensus       145 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~~~~T~~---------------------l  202 (300)
T 4a26_A          145 TPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENA-TVTIVHSGTST---------------------E  202 (300)
T ss_dssp             CCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTSCH---------------------H
T ss_pred             CCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCCCC---------------------c
Confidence            344434444333222223478999999985 589999999999999 78888653221                     1


Q ss_pred             HHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          248 QEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       248 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      .  +.+... .+|+||.++|.+.++..  ..++++ ..++.+|..
T Consensus       203 ~--l~~~~~-~ADIVI~Avg~p~~I~~--~~vk~G-avVIDvgi~  241 (300)
T 4a26_A          203 D--MIDYLR-TADIVIAAMGQPGYVKG--EWIKEG-AAVVDVGTT  241 (300)
T ss_dssp             H--HHHHHH-TCSEEEECSCCTTCBCG--GGSCTT-CEEEECCCE
T ss_pred             h--hhhhhc-cCCEEEECCCCCCCCcH--HhcCCC-cEEEEEecc
Confidence            1  001111 57999999998755433  457886 888888764

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=95.88  E-value=0.033  Score=50.60  Aligned_cols=89  Identities=22%  Similarity=0.210  Sum_probs=63.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .+++|.|+|.|.+|...++.++..|. +|++.+++.++.+.+.++|+..+      +  +.+.+.     ..|+|+.++.
T Consensus       154 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~------~--l~e~l~-----~aDvVi~~vp  219 (330)
T 2gcg_A          154 TQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGRQPRPEEAAEFQAEFV------S--TPELAA-----QSDFIVVACS  219 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESSSCCHHHHHTTTCEEC------C--HHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcchhHHHhcCceeC------C--HHHHHh-----hCCEEEEeCC
Confidence            47899999999999999999999999 79999887766666666665421      1  333232     4699999886


Q ss_pred             Ch----HhH-HHHHHHhhcCCcEEEEEcC
Q 017336          268 NI----DNM-ISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       268 ~~----~~~-~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..    ..+ ...+..|+++ ..++.++.
T Consensus       220 ~~~~t~~~i~~~~~~~mk~g-ailIn~sr  247 (330)
T 2gcg_A          220 LTPATEGLCNKDFFQKMKET-AVFINISR  247 (330)
T ss_dssp             CCTTTTTCBSHHHHHHSCTT-CEEEECSC
T ss_pred             CChHHHHhhCHHHHhcCCCC-cEEEECCC
Confidence            43    122 3566778885 77766554

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=95.88  E-value=0.073  Score=48.68  Aligned_cols=134  Identities=15%  Similarity=0.093  Sum_probs=79.3

Q ss_pred             CEEEEECCCHHHH-HHHHHHHHc-CCcEEEEEcCChhHHHH-HHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          190 SSVAVFGLGAVGL-AAAEGARIA-GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       190 ~~vlI~G~g~~G~-~ai~la~~~-g~~~V~~~~~~~~~~~~-~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      -+|.|+|+|.+|. ..+..++.. +++-+.+++++.++.+. ++++|+...-+       +.+.+.   ...+|+|+.|+
T Consensus        28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~-------~~~ll~---~~~~D~V~i~t   97 (350)
T 3rc1_A           28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEG-------YPALLE---RDDVDAVYVPL   97 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEES-------HHHHHT---CTTCSEEEECC
T ss_pred             eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCC-------HHHHhc---CCCCCEEEECC
Confidence            4789999999998 556666555 67334466777766554 45678764311       322221   12799999999


Q ss_pred             CChHhHHHHHHHhhcCCcEEEEEcCCCCCceeecc-chhh--cccceEEEEeccCCCCCCCHHHHHHHHHcCCC
Q 017336          267 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINV--LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  337 (373)
Q Consensus       267 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~--~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l  337 (373)
                      ....+.+.+..+|..  |+-+++..+.....-... ....  .+++.+.-..  .++....++.+.+++.+|.+
T Consensus        98 p~~~h~~~~~~al~a--Gk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~--~~R~~p~~~~~k~~i~~G~i  167 (350)
T 3rc1_A           98 PAVLHAEWIDRALRA--GKHVLAEKPLTTDRPQAERLFAVARERGLLLMENF--MFLHHPQHRQVADMLDEGVI  167 (350)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEEC--GGGGCTHHHHHHHHHHTTTT
T ss_pred             CcHHHHHHHHHHHHC--CCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEe--cccCCHHHHHHHHHHhcCCC
Confidence            988888899999987  455666543211100000 0111  1334332222  23333467888888888865

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=95.88  E-value=0.074  Score=48.43  Aligned_cols=133  Identities=16%  Similarity=0.143  Sum_probs=78.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCChhHHHH-HHhcCCceeecCCCCCccHHHHHHHHcCC-CccEEEEcc
Q 017336          190 SSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECT  266 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~-~~~lg~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~  266 (373)
                      -+|.|+|+|.+|...+..++.. +++.+.++++++++.+. ++++|+. ++.  +    +    .++... .+|+|+.|+
T Consensus         5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~-~~~--~----~----~~~l~~~~~D~V~i~t   73 (344)
T 3euw_A            5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAE-AVA--S----P----DEVFARDDIDGIVIGS   73 (344)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCE-EES--S----H----HHHTTCSCCCEEEECS
T ss_pred             eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCc-eeC--C----H----HHHhcCCCCCEEEEeC
Confidence            3689999999998877777665 66334467777777554 4567743 221  1    2    233332 799999999


Q ss_pred             CChHhHHHHHHHhhcCCcEEEEEcCCCCCceeec-cchhh--cccceEEEEeccCCCCCCCHHHHHHHHHcCCC
Q 017336          267 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT-KPINV--LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  337 (373)
Q Consensus       267 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~-~~~~~--~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l  337 (373)
                      ....+.+.+..++..+  +-+++..+.....-.. .....  .+++.+.-..  ..+....++.+.+++++|.+
T Consensus        74 p~~~h~~~~~~al~~g--k~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~k~~i~~g~i  143 (344)
T 3euw_A           74 PTSTHVDLITRAVERG--IPALCEKPIDLDIEMVRACKEKIGDGASKVMLGF--NRRFDPSFAAINARVANQEI  143 (344)
T ss_dssp             CGGGHHHHHHHHHHTT--CCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECC--GGGGCHHHHHHHHHHHTTTT
T ss_pred             CchhhHHHHHHHHHcC--CcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecc--hhhcCHHHHHHHHHHhcCCC
Confidence            9888888888988874  4455544321110000 00111  1333332222  22333457788888888865

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=95.88  E-value=0.035  Score=47.66  Aligned_cols=73  Identities=21%  Similarity=0.167  Sum_probs=49.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc--CCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHcCCCccEEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSV  263 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~--g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vi  263 (373)
                      .+++|||+|+ |.+|...++.+...  |+ +|+++++++++.+.+ .-++..+ .|..+     .+.+.+... ++|+||
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~-~~~~~~~~~D~~d-----~~~~~~~~~-~~d~vi   74 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI-GGEADVFIGDITD-----ADSINPAFQ-GIDALV   74 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT-TCCTTEEECCTTS-----HHHHHHHHT-TCSEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc-CCCeeEEEecCCC-----HHHHHHHHc-CCCEEE
Confidence            4678999997 99999999998888  77 899999987765443 1123222 22222     123444333 689999


Q ss_pred             EccCC
Q 017336          264 ECTGN  268 (373)
Q Consensus       264 d~~g~  268 (373)
                      ++.+.
T Consensus        75 ~~a~~   79 (253)
T 1xq6_A           75 ILTSA   79 (253)
T ss_dssp             ECCCC
T ss_pred             Eeccc
Confidence            98873

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.87  E-value=0.017  Score=50.81  Aligned_cols=94  Identities=18%  Similarity=0.241  Sum_probs=63.0

Q ss_pred             cccchhhhhhhhhhccCC-CCCCEEEEECCC-HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCcc
Q 017336          169 LSCGVSTGLGATLNVAKP-ERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP  246 (373)
Q Consensus       169 ~~~~~~ta~~~l~~~~~~-~~~~~vlI~G~g-~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~  246 (373)
                      +||........| +...+ -.|++++|+|.| .+|..+++++...|+ +|+++.+..                   .+  
T Consensus       141 ~PcTp~gv~~lL-~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gA-tVtv~hs~T-------------------~~--  197 (286)
T 4a5o_A          141 RPCTPKGIMTLL-ASTGADLYGMDAVVVGASNIVGRPMALELLLGGC-TVTVTHRFT-------------------RD--  197 (286)
T ss_dssp             CCHHHHHHHHHH-HHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTC-EEEEECTTC-------------------SC--
T ss_pred             CCCCHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCC-------------------cC--
Confidence            344444444433 33333 479999999985 699999999999999 788874321                   11  


Q ss_pred             HHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          247 IQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       247 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +.+.++     .+|+||.++|.+.++.  -+.++++ ..++.+|...
T Consensus       198 L~~~~~-----~ADIVI~Avg~p~~I~--~~~vk~G-avVIDvgi~~  236 (286)
T 4a5o_A          198 LADHVS-----RADLVVVAAGKPGLVK--GEWIKEG-AIVIDVGINR  236 (286)
T ss_dssp             HHHHHH-----TCSEEEECCCCTTCBC--GGGSCTT-CEEEECCSCS
T ss_pred             HHHHhc-----cCCEEEECCCCCCCCC--HHHcCCC-eEEEEecccc
Confidence            322222     4799999999865543  3567886 8888888654

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=95.87  E-value=0.018  Score=50.42  Aligned_cols=78  Identities=13%  Similarity=0.191  Sum_probs=47.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh---HHHHH----HhcCCcee---ecCCCCC--ccHHHHHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK---RFEEA----KKFGVTDF---VNTSEHD--RPIQEVIAEM  254 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~---~~~~~----~~lg~~~v---i~~~~~~--~~~~~~~~~~  254 (373)
                      .++++||+|+ +++|.++++.+...|+ +|+++.+...   +.+.+    ++.+....   .|..+.+  ..+.+.+.+.
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   88 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE   88 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4689999987 8999999999989999 7888766543   32222    22343321   2322211  0122222222


Q ss_pred             cCCCccEEEEccC
Q 017336          255 TNGGVDRSVECTG  267 (373)
Q Consensus       255 ~~~~~d~vid~~g  267 (373)
                      . +++|+++++.|
T Consensus        89 ~-g~iD~lvnnAg  100 (262)
T 3ksu_A           89 F-GKVDIAINTVG  100 (262)
T ss_dssp             H-CSEEEEEECCC
T ss_pred             c-CCCCEEEECCC
Confidence            2 37999999988

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=95.86  E-value=0.03  Score=49.83  Aligned_cols=41  Identities=22%  Similarity=0.160  Sum_probs=34.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEc-CChhHHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEEA  229 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~-~~~~~~~~~  229 (373)
                      .++++||+|+ |++|.++++.+...|+ +|++++ ++.++.+.+
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~   50 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL   50 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHH
Confidence            4688999987 8999999999999999 899998 887765543

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=95.86  E-value=0.028  Score=48.77  Aligned_cols=97  Identities=22%  Similarity=0.278  Sum_probs=61.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcC--CCccEEEEc
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN--GGVDRSVEC  265 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~--~~~d~vid~  265 (373)
                      ++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.     ....++..+. ..+.+.+.+...  +++|++|++
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~d~~d~-~~v~~~~~~~~~~~g~iD~li~~   94 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNAD-----HSFTIKDSGE-EEIKSVIEKINSKSIKVDTFVCA   94 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTSS-----EEEECSCSSH-HHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc-----cceEEEeCCH-HHHHHHHHHHHHHcCCCCEEEEC
Confidence            688999987 8999999999999999 79999888765321     1112222211 123333333322  379999999


Q ss_pred             cCCh-------H-------------------hHHHHHHHhhcCCcEEEEEcCCC
Q 017336          266 TGNI-------D-------------------NMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       266 ~g~~-------~-------------------~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      .|..       +                   ....+...+.++ |+++.++...
T Consensus        95 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~~  147 (251)
T 3orf_A           95 AGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQG-GLFVLTGASA  147 (251)
T ss_dssp             CCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCGG
T ss_pred             CccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccC-CEEEEEechh
Confidence            8830       0                   123445556665 8999987643

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.86  E-value=0.025  Score=51.68  Aligned_cols=75  Identities=19%  Similarity=0.232  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHh-cC---Ccee-ecCCCCCccHHHHHHHHcCCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKK-FG---VTDF-VNTSEHDRPIQEVIAEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~~~~-lg---~~~v-i~~~~~~~~~~~~~~~~~~~~~d  260 (373)
                      .+++|||+|+ |.+|...++.+... |..+|+++++++.+.+.+.+ +.   +..+ .|..+     .+.+.+... ++|
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d-----~~~l~~~~~-~~D   93 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRD-----LERLNYALE-GVD   93 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTC-----HHHHHHHTT-TCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCC-----HHHHHHHHh-cCC
Confidence            4689999997 99999999888877 86589999998877665533 32   2222 12222     123444443 699


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      +||++++.
T Consensus        94 ~Vih~Aa~  101 (344)
T 2gn4_A           94 ICIHAAAL  101 (344)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=95.86  E-value=0.038  Score=49.01  Aligned_cols=73  Identities=19%  Similarity=0.209  Sum_probs=52.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  270 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  270 (373)
                      +|.|+|.|.+|...++.+...|. .|++.++++++.+.+.+.|+...   .  +  ..+.+.     ..|+||.|+..+.
T Consensus         3 ~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~---~--~--~~~~~~-----~advvi~~v~~~~   69 (287)
T 3pdu_A            3 TYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVALGARQA---S--S--PAEVCA-----ACDITIAMLADPA   69 (287)
T ss_dssp             CEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHHTCEEC---S--C--HHHHHH-----HCSEEEECCSSHH
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec---C--C--HHHHHH-----cCCEEEEEcCCHH
Confidence            68899999999998888888898 79999999999888887776421   1  1  222222     3588888887754


Q ss_pred             hHHHHH
Q 017336          271 NMISAF  276 (373)
Q Consensus       271 ~~~~~~  276 (373)
                      .+...+
T Consensus        70 ~~~~v~   75 (287)
T 3pdu_A           70 AAREVC   75 (287)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            444443

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=95.85  E-value=0.024  Score=49.56  Aligned_cols=81  Identities=14%  Similarity=0.184  Sum_probs=51.0

Q ss_pred             CCCCCEEEEECC---CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceee--cCCCCC--ccHHHHHHHH
Q 017336          186 PERGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFV--NTSEHD--RPIQEVIAEM  254 (373)
Q Consensus       186 ~~~~~~vlI~G~---g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi--~~~~~~--~~~~~~~~~~  254 (373)
                      ..++++|||+|+   +++|.+.++.+...|+ +|++++++++..+.+++    .+.-.++  |..+.+  ..+.+.+.+.
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   89 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH   89 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            456899999974   6999999999889999 89999887654444433    3322222  322211  1122223333


Q ss_pred             cCCCccEEEEccCC
Q 017336          255 TNGGVDRSVECTGN  268 (373)
Q Consensus       255 ~~~~~d~vid~~g~  268 (373)
                      . +++|++|++.|.
T Consensus        90 ~-g~id~lv~nAg~  102 (271)
T 3ek2_A           90 W-DSLDGLVHSIGF  102 (271)
T ss_dssp             C-SCEEEEEECCCC
T ss_pred             c-CCCCEEEECCcc
Confidence            2 379999999873

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=95.83  E-value=0.023  Score=50.23  Aligned_cols=97  Identities=20%  Similarity=0.130  Sum_probs=64.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc------CC--ceeecCCCCCccHHHHHHHHcCCCc
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF------GV--TDFVNTSEHDRPIQEVIAEMTNGGV  259 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l------g~--~~vi~~~~~~~~~~~~~~~~~~~~~  259 (373)
                      .+++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.      +.  +.+-.... +  ..+.+.. ..+.|
T Consensus        75 ~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~-D--~~~~l~~-~~~~f  149 (275)
T 1iy9_A           75 NPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD-D--GFMHIAK-SENQY  149 (275)
T ss_dssp             SCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES-C--SHHHHHT-CCSCE
T ss_pred             CCCEEEEECCch-HHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEEC-c--HHHHHhh-CCCCe
Confidence            568999998864 56666777776666999999999988888762      11  11110111 1  2233332 23479


Q ss_pred             cEEEEccCC----------hHhHHHHHHHhhcCCcEEEEEc
Q 017336          260 DRSVECTGN----------IDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       260 d~vid~~g~----------~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      |+|+.-...          .+++..+.+.|+++ |.++...
T Consensus       150 D~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pg-G~lv~~~  189 (275)
T 1iy9_A          150 DVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQT  189 (275)
T ss_dssp             EEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEEC
T ss_pred             eEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            998864322          36889999999997 9988763

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=95.80  E-value=0.031  Score=49.65  Aligned_cols=79  Identities=22%  Similarity=0.298  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCc--EEEEEcCChhHHHHHHh-c-----CCce-e--ecCCCCCccHHHHHHHHc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGAS--RIIGVDRSSKRFEEAKK-F-----GVTD-F--VNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~--~V~~~~~~~~~~~~~~~-l-----g~~~-v--i~~~~~~~~~~~~~~~~~  255 (373)
                      .++++||+|+ |++|.+++..+...|+.  +|+.++++.++.+.+.+ +     +... .  .|..+. ..+.+.+.+..
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~  110 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQA-EKIKPFIENLP  110 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCG-GGHHHHHHTSC
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCH-HHHHHHHHHHH
Confidence            4689999987 89999988777666652  78888898877665532 2     3322 1  233222 22444444332


Q ss_pred             C--CCccEEEEccC
Q 017336          256 N--GGVDRSVECTG  267 (373)
Q Consensus       256 ~--~~~d~vid~~g  267 (373)
                      .  +++|++|++.|
T Consensus       111 ~~~g~iD~lVnnAG  124 (287)
T 3rku_A          111 QEFKDIDILVNNAG  124 (287)
T ss_dssp             GGGCSCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence            2  37999999987

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=95.80  E-value=0.072  Score=45.02  Aligned_cols=75  Identities=15%  Similarity=0.096  Sum_probs=54.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      +|+|+|+|.+|...++.+...|. .|+++++++++.+.+. .++...+. -+..+   .+.+.+..-.++|+++-+++..
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~~i~-gd~~~---~~~l~~a~i~~ad~vi~~~~~d   76 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKATIIH-GDGSH---KEILRDAEVSKNDVVVILTPRD   76 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSEEEE-SCTTS---HHHHHHHTCCTTCEEEECCSCH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCeEEE-cCCCC---HHHHHhcCcccCCEEEEecCCc
Confidence            58999999999999999999998 8999999999888764 46664332 22222   1234444233799999999985


Q ss_pred             H
Q 017336          270 D  270 (373)
Q Consensus       270 ~  270 (373)
                      .
T Consensus        77 ~   77 (218)
T 3l4b_C           77 E   77 (218)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=95.80  E-value=0.015  Score=51.25  Aligned_cols=97  Identities=18%  Similarity=0.171  Sum_probs=61.5

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~--g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      ++|||+|+ |.+|...++.+...  |+ +|++++++.++.+.+...++..+ .|..+     .+.+.+... ++|+||++
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~d-----~~~l~~~~~-~~d~vi~~   73 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNVEKASTLADQGVEVRHGDYNQ-----PESLQKAFA-GVSKLLFI   73 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTTHHHHHTTCEEEECCTTC-----HHHHHHHTT-TCSEEEEC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCHHHHhHHhhcCCeEEEeccCC-----HHHHHHHHh-cCCEEEEc
Confidence            36899998 99999999888877  87 78888888776655555555433 23222     123444443 69999999


Q ss_pred             cCCh-------HhHHHHHHHhhcC-CcEEEEEcCCC
Q 017336          266 TGNI-------DNMISAFECVHDG-WGVAVLVGVPS  293 (373)
Q Consensus       266 ~g~~-------~~~~~~~~~l~~~-~g~~v~~g~~~  293 (373)
                      .+..       ......++.+... .++++.++...
T Consensus        74 a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~  109 (287)
T 2jl1_A           74 SGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF  109 (287)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred             CCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            8741       1222344444432 24888887643

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=95.79  E-value=0.061  Score=49.00  Aligned_cols=133  Identities=20%  Similarity=0.292  Sum_probs=78.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCcEEE-EEcCChhHHHH-HHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          191 SVAVFGLGAVGLAAAEGARIA-GASRII-GVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~-g~~~V~-~~~~~~~~~~~-~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      +|.|+|+|.+|...+..++.. ++ .++ ++++++++.+. ++++|...++.  +    +.+.+..   ..+|+|+.|+.
T Consensus         4 rvgiIG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~~~~~--~----~~~ll~~---~~~D~V~i~tp   73 (344)
T 3ezy_A            4 RIGVIGLGRIGTIHAENLKMIDDA-ILYAISDVREDRLREMKEKLGVEKAYK--D----PHELIED---PNVDAVLVCSS   73 (344)
T ss_dssp             EEEEECCSHHHHHHHHHGGGSTTE-EEEEEECSCHHHHHHHHHHHTCSEEES--S----HHHHHHC---TTCCEEEECSC
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHhCCCceeC--C----HHHHhcC---CCCCEEEEcCC
Confidence            689999999998866666554 56 555 56778777554 45677654432  1    3333321   27999999999


Q ss_pred             ChHhHHHHHHHhhcCCcEEEEEcCCCCCceeec-cchhhc--ccceEEEEeccCCCCCCCHHHHHHHHHcCCC
Q 017336          268 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT-KPINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  337 (373)
Q Consensus       268 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~-~~~~~~--~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l  337 (373)
                      ...+.+.+..++..  |+-+++..+.....-.. ......  +++.+.-..  ..+....++.+.+++++|.+
T Consensus        74 ~~~h~~~~~~al~~--gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~--~~R~~p~~~~~k~~i~~G~i  142 (344)
T 3ezy_A           74 TNTHSELVIACAKA--KKHVFCEKPLSLNLADVDRMIEETKKADVILFTGF--NRRFDRNFKKLKEAVENGTI  142 (344)
T ss_dssp             GGGHHHHHHHHHHT--TCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEEC--GGGGCHHHHHHHHHHHTTTT
T ss_pred             CcchHHHHHHHHhc--CCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEee--cccCCHHHHHHHHHHHcCCC
Confidence            87788888888887  44455544321110000 011111  333332222  23333457788888888865

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=95.78  E-value=0.064  Score=48.56  Aligned_cols=131  Identities=19%  Similarity=0.229  Sum_probs=78.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCcEEE-EEcCChhHHHH-HHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          191 SVAVFGLGAVGLAAAEGARIA-GASRII-GVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~-g~~~V~-~~~~~~~~~~~-~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      +|.|+|+|.+|...+..++.. ++ +++ ++++++++.+. ++++|+.  +  .+    +.+.+..   ..+|+|+.|+.
T Consensus         5 ~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~--~--~~----~~~~l~~---~~~D~V~i~tp   72 (331)
T 4hkt_A            5 RFGLLGAGRIGKVHAKAVSGNADA-RLVAVADAFPAAAEAIAGAYGCE--V--RT----IDAIEAA---ADIDAVVICTP   72 (331)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCE--E--CC----HHHHHHC---TTCCEEEECSC
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCc-EEEEEECCCHHHHHHHHHHhCCC--c--CC----HHHHhcC---CCCCEEEEeCC
Confidence            689999999998877777665 66 555 57777777554 4557765  2  21    3333321   26999999999


Q ss_pred             ChHhHHHHHHHhhcCCcEEEEEcCCCCCceeecc-chhhc--ccceEEEEeccCCCCCCCHHHHHHHHHcCCC
Q 017336          268 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  337 (373)
Q Consensus       268 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~--~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l  337 (373)
                      ...+.+.+..++..  |+-+++..+.....-... .....  ++..+.-..  ..+....++.+.+++++|.+
T Consensus        73 ~~~h~~~~~~al~~--gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~~~~i~~g~i  141 (331)
T 4hkt_A           73 TDTHADLIERFARA--GKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGF--NRRFDPHFMAVRKAIDDGRI  141 (331)
T ss_dssp             GGGHHHHHHHHHHT--TCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECC--GGGGCHHHHHHHHHHHTTTT
T ss_pred             chhHHHHHHHHHHc--CCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcc--cccCCHHHHHHHHHHHcCCC
Confidence            87888889999887  455666443211100000 01111  333333222  22333457788888888865

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=95.77  E-value=0.026  Score=48.49  Aligned_cols=77  Identities=21%  Similarity=0.242  Sum_probs=48.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE-cCChhHHHHH----HhcCCce-e-e--cCCCCCccHHHHHH---HHc
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEA----KKFGVTD-F-V--NTSEHDRPIQEVIA---EMT  255 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~-~~~~~~~~~~----~~lg~~~-v-i--~~~~~~~~~~~~~~---~~~  255 (373)
                      ++++||+|+ |.+|...++.+...|+ +|+++ +++.++.+.+    ++.+... . +  |..+.+ .+.+.+.   +..
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGF-ALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAE-AATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHH-HHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHH-HHHHHHHHHHHhc
Confidence            368999987 8999999999988999 78887 7877665543    2234321 1 2  222211 1222222   222


Q ss_pred             CCCccEEEEccCC
Q 017336          256 NGGVDRSVECTGN  268 (373)
Q Consensus       256 ~~~~d~vid~~g~  268 (373)
                       +++|++|++.|.
T Consensus        79 -~~~d~li~~Ag~   90 (245)
T 2ph3_A           79 -GGLDTLVNNAGI   90 (245)
T ss_dssp             -TCCCEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             379999999873

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=95.76  E-value=0.042  Score=50.24  Aligned_cols=91  Identities=20%  Similarity=0.245  Sum_probs=64.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHH-HcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGAR-IAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~-~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      -.+++|.|+|.|.+|...++.++ .+|. +|++.+++.++.+...++|+..+   .  +  +.+.+.     ..|+|+.+
T Consensus       161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~~~~~~~~~~~g~~~~---~--~--l~ell~-----~aDvVil~  227 (348)
T 2w2k_A          161 PRGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVAPADAETEKALGAERV---D--S--LEELAR-----RSDCVSVS  227 (348)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHTCEEC---S--S--HHHHHH-----HCSEEEEC
T ss_pred             CCCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCCCcchhhHhhcCcEEe---C--C--HHHHhc-----cCCEEEEe
Confidence            35789999999999999999999 9999 89999988766666666676422   1  1  323222     36899998


Q ss_pred             cCChH----hH-HHHHHHhhcCCcEEEEEcC
Q 017336          266 TGNID----NM-ISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       266 ~g~~~----~~-~~~~~~l~~~~g~~v~~g~  291 (373)
                      +....    .+ ...+..|+++ ..++.++.
T Consensus       228 vp~~~~t~~li~~~~l~~mk~g-ailin~sr  257 (348)
T 2w2k_A          228 VPYMKLTHHLIDEAFFAAMKPG-SRIVNTAR  257 (348)
T ss_dssp             CCCSGGGTTCBCHHHHHHSCTT-EEEEECSC
T ss_pred             CCCChHHHHHhhHHHHhcCCCC-CEEEECCC
Confidence            76432    22 3566778885 66766554

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=95.76  E-value=0.066  Score=49.01  Aligned_cols=134  Identities=13%  Similarity=0.111  Sum_probs=79.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc--CCcEEEEEcCChhHHHH-HHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          190 SSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~--g~~~V~~~~~~~~~~~~-~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      -+|.|+|+|.+|...+..++..  +++-+.++++++++.+. ++++|+ .++.  +    +.+.+.+   ..+|+|+.|+
T Consensus        14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~~~--~----~~~ll~~---~~~D~V~i~t   83 (354)
T 3q2i_A           14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RGHA--S----LTDMLAQ---TDADIVILTT   83 (354)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EEES--C----HHHHHHH---CCCSEEEECS
T ss_pred             ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-ceeC--C----HHHHhcC---CCCCEEEECC
Confidence            4789999999998777777665  66334466778777655 456786 3321  1    4333332   3699999999


Q ss_pred             CChHhHHHHHHHhhcCCcEEEEEcCCCCCceeec-cchhhc--ccceEEEEeccCCCCCCCHHHHHHHHHcCCC
Q 017336          267 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT-KPINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  337 (373)
Q Consensus       267 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~-~~~~~~--~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l  337 (373)
                      ....+.+.+..++..  |+-+++..+-....-.. ......  ++..+.-..  .++....++.+.+++++|.+
T Consensus        84 p~~~h~~~~~~al~~--gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~k~~i~~g~i  153 (354)
T 3q2i_A           84 PSGLHPTQSIECSEA--GFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVK--QNRRNATLQLLKRAMQEKRF  153 (354)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECC--GGGGSHHHHHHHHHHHTTTT
T ss_pred             CcHHHHHHHHHHHHC--CCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEE--cccCCHHHHHHHHHHhcCCC
Confidence            987788888888887  45566644321110000 001111  333332111  22333357788888888865

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=95.75  E-value=0.018  Score=51.68  Aligned_cols=101  Identities=15%  Similarity=0.079  Sum_probs=65.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC--------CceeecCCCCCccHHHHHHHHcCC
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG--------VTDFVNTSEHDRPIQEVIAEMTNG  257 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg--------~~~vi~~~~~~~~~~~~~~~~~~~  257 (373)
                      ..++++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-        ...+ .....+  ..+.+.....+
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v-~~~~~D--~~~~~~~~~~~  168 (304)
T 3bwc_A           93 HPKPERVLIIGGGD-GGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRA-TVRVGD--GLAFVRQTPDN  168 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTE-EEEESC--HHHHHHSSCTT
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcE-EEEECc--HHHHHHhccCC
Confidence            35678999998865 666677777655459999999998888877632        1111 011112  33333322334


Q ss_pred             CccEEEEccCC----------hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          258 GVDRSVECTGN----------IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       258 ~~d~vid~~g~----------~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      .||+|+.....          .+++..+.+.|+++ |++++...
T Consensus       169 ~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~~  211 (304)
T 3bwc_A          169 TYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPD-GICCNQGE  211 (304)
T ss_dssp             CEEEEEEECC---------CCHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             ceeEEEECCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence            89998864321          36788999999997 99988643

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.75  E-value=0.082  Score=48.49  Aligned_cols=91  Identities=14%  Similarity=0.167  Sum_probs=61.0

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      ..+|.|+|.|.+|...++.+...|. .|++.++++++.+.+.+.|+...     .+  ..+.+...  ...|+||-++..
T Consensus        22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~~-----~s--~~e~~~~a--~~~DvVi~~vp~   91 (358)
T 4e21_A           22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGIAGA-----RS--IEEFCAKL--VKPRVVWLMVPA   91 (358)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCBCC-----SS--HHHHHHHS--CSSCEEEECSCG
T ss_pred             CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCEEe-----CC--HHHHHhcC--CCCCEEEEeCCH
Confidence            3689999999999999999999998 89999999999988887765321     11  33333221  135888888876


Q ss_pred             hHhHHHHHHH----hhcCCcEEEEEcC
Q 017336          269 IDNMISAFEC----VHDGWGVAVLVGV  291 (373)
Q Consensus       269 ~~~~~~~~~~----l~~~~g~~v~~g~  291 (373)
                      . .....++.    +.++ ..++.++.
T Consensus        92 ~-~v~~vl~~l~~~l~~g-~iiId~st  116 (358)
T 4e21_A           92 A-VVDSMLQRMTPLLAAN-DIVIDGGN  116 (358)
T ss_dssp             G-GHHHHHHHHGGGCCTT-CEEEECSS
T ss_pred             H-HHHHHHHHHHhhCCCC-CEEEeCCC
Confidence            4 44443333    3343 44444443

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.74  E-value=0.057  Score=47.52  Aligned_cols=84  Identities=23%  Similarity=0.323  Sum_probs=58.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-eecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~-vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      +|.|+|+|.+|.+.+..+...|. .|+++++++++.+.+++.|... +..  +        +.+.  ...|+||.|+.. 
T Consensus         2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~--~--------~~~~--~~~D~vi~av~~-   67 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQ--D--------LSLL--QTAKIIFLCTPI-   67 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEES--C--------GGGG--TTCSEEEECSCH-
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCCccccC--C--------HHHh--CCCCEEEEECCH-
Confidence            58899999999999998888898 8999999999988888877631 211  1        1122  368999999986 


Q ss_pred             HhHHHHHHH----hhcCCcEEEEE
Q 017336          270 DNMISAFEC----VHDGWGVAVLV  289 (373)
Q Consensus       270 ~~~~~~~~~----l~~~~g~~v~~  289 (373)
                      ......++.    ++++ ..++.+
T Consensus        68 ~~~~~~~~~l~~~~~~~-~~vv~~   90 (279)
T 2f1k_A           68 QLILPTLEKLIPHLSPT-AIVTDV   90 (279)
T ss_dssp             HHHHHHHHHHGGGSCTT-CEEEEC
T ss_pred             HHHHHHHHHHHhhCCCC-CEEEEC
Confidence            333434333    3443 455554

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.74  E-value=0.031  Score=46.78  Aligned_cols=95  Identities=12%  Similarity=-0.002  Sum_probs=61.4

Q ss_pred             ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc-CC------------------cee-ecCCC
Q 017336          183 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GV------------------TDF-VNTSE  242 (373)
Q Consensus       183 ~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l-g~------------------~~v-i~~~~  242 (373)
                      ...+.++.+||-+|+|. |..+..+++. |+ +|++++.+++..+.+++. +.                  ..+ -|..+
T Consensus        17 ~l~~~~~~~vLD~GCG~-G~~~~~la~~-g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~   93 (203)
T 1pjz_A           17 SLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFA   93 (203)
T ss_dssp             HHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSS
T ss_pred             hcccCCCCEEEEeCCCC-cHhHHHHHHC-CC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcccc
Confidence            34567889999999875 6667777776 88 899999999988888653 21                  111 12111


Q ss_pred             CCccHHHHHHHHcCCCccEEEEccC----C----hHhHHHHHHHhhcCCcEEEEE
Q 017336          243 HDRPIQEVIAEMTNGGVDRSVECTG----N----IDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       243 ~~~~~~~~~~~~~~~~~d~vid~~g----~----~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      ..  +.      ..+.||+|++...    .    ...+..+.+.|+|+ |+++++
T Consensus        94 l~--~~------~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkpg-G~~~l~  139 (203)
T 1pjz_A           94 LT--AR------DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLI  139 (203)
T ss_dssp             ST--HH------HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEE
T ss_pred             CC--cc------cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence            11  10      0136999997422    1    12567889999997 984433

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=95.73  E-value=0.021  Score=50.02  Aligned_cols=73  Identities=21%  Similarity=0.255  Sum_probs=47.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee--ecCCCCC--ccHHHHHHHHcCCCccEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF--VNTSEHD--RPIQEVIAEMTNGGVDRS  262 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v--i~~~~~~--~~~~~~~~~~~~~~~d~v  262 (373)
                      +|+++||+|+ +++|+++++.+...|+ +|+.+++++++     .+.....  .|..+.+  ..+.+.+.+.. |++|++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~iDil   82 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPE-----GLPEELFVEADLTTKEGCAIVAEATRQRL-GGVDVI   82 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCT-----TSCTTTEEECCTTSHHHHHHHHHHHHHHT-SSCSEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchh-----CCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCCCEE
Confidence            6899999987 8999999999999999 89999886542     1111111  2222211  11333333333 379999


Q ss_pred             EEccC
Q 017336          263 VECTG  267 (373)
Q Consensus       263 id~~g  267 (373)
                      +++.|
T Consensus        83 VnnAG   87 (261)
T 4h15_A           83 VHMLG   87 (261)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99876

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=95.73  E-value=0.038  Score=52.53  Aligned_cols=80  Identities=26%  Similarity=0.339  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH---HHHHHhcCCcee-ecCCCCC--ccHHHHHHHHcCCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR---FEEAKKFGVTDF-VNTSEHD--RPIQEVIAEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~---~~~~~~lg~~~v-i~~~~~~--~~~~~~~~~~~~~~~d  260 (373)
                      +++++||+|+ |++|..++..+...|+ +|+.++++...   .+..++++...+ .|..+.+  ..+.+.+.+..++.+|
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga-~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id  290 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGA-TVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVD  290 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence            5789999987 8999999988888899 78888775432   223345565432 3333332  1122233333333599


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      ++|++.|.
T Consensus       291 ~lV~nAGv  298 (454)
T 3u0b_A          291 ILVNNAGI  298 (454)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999874

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=95.72  E-value=0.035  Score=50.29  Aligned_cols=77  Identities=18%  Similarity=0.271  Sum_probs=48.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCC-----hhHHHHHH----hcCCce-e--ecCCCCCccHHHHHHHHc
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS-----SKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~-----~~~~~~~~----~lg~~~-v--i~~~~~~~~~~~~~~~~~  255 (373)
                      ++++||+|+ |++|.++++.+...|+ +|+++.++     .++.+.+.    +.+... .  .|..+. ..+.+.+.+..
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~-~~v~~~~~~~~   82 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQ-VSVDRAIDQII   82 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCH-HHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCH-HHHHHHHHHHH
Confidence            578999987 8999999999999999 88876554     34444332    234322 2  232221 11223333221


Q ss_pred             --CCCccEEEEccC
Q 017336          256 --NGGVDRSVECTG  267 (373)
Q Consensus       256 --~~~~d~vid~~g  267 (373)
                        -+++|+++++.|
T Consensus        83 ~~~g~iD~lVnnAG   96 (324)
T 3u9l_A           83 GEDGRIDVLIHNAG   96 (324)
T ss_dssp             HHHSCCSEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence              137999999988

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=95.72  E-value=0.023  Score=50.38  Aligned_cols=79  Identities=18%  Similarity=0.160  Sum_probs=49.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh-hHHHHHH-----hcCCce-e--ecCCCC---CccHHHHHH--
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAK-----KFGVTD-F--VNTSEH---DRPIQEVIA--  252 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~-~~~~~~~-----~lg~~~-v--i~~~~~---~~~~~~~~~--  252 (373)
                      .++++||+|+ |++|.++++.+...|+ +|++++++. ++.+.+.     +.+... +  .|..+.   ...+.+.+.  
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            4688999987 8999999999988999 898888886 5544332     234322 1  233321   111222222  


Q ss_pred             -HHcCCCccEEEEccCC
Q 017336          253 -EMTNGGVDRSVECTGN  268 (373)
Q Consensus       253 -~~~~~~~d~vid~~g~  268 (373)
                       +.. +++|++|++.|.
T Consensus       101 ~~~~-g~iD~lvnnAG~  116 (288)
T 2x9g_A          101 FRAF-GRCDVLVNNASA  116 (288)
T ss_dssp             HHHH-SCCCEEEECCCC
T ss_pred             HHhc-CCCCEEEECCCC
Confidence             222 379999999873

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=95.71  E-value=0.026  Score=53.42  Aligned_cols=103  Identities=17%  Similarity=0.217  Sum_probs=70.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHH-cCC--cEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHcCCCcc
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARI-AGA--SRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVD  260 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~-~g~--~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d  260 (373)
                      ++....+|||+|+|++|..++.++.+ .+.  ..|++++.++.+++..+.+|.... ...+..+  ..+.+..+..++ |
T Consensus         9 ~~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vdadn--v~~~l~aLl~~~-D   85 (480)
T 2ph5_A            9 KILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITPQN--YLEVIGSTLEEN-D   85 (480)
T ss_dssp             CBCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCTTT--HHHHTGGGCCTT-C
T ss_pred             eecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEeccchh--HHHHHHHHhcCC-C
Confidence            34556789999999999999887765 444  368888877666666666776433 2222333  444455555544 9


Q ss_pred             EEEEccCChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          261 RSVECTGNIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       261 ~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      +|++++-....+..+-.|+..+ -.++....
T Consensus        86 vVIN~s~~~~~l~Im~acleaG-v~YlDTa~  115 (480)
T 2ph5_A           86 FLIDVSIGISSLALIILCNQKG-ALYINAAT  115 (480)
T ss_dssp             EEEECCSSSCHHHHHHHHHHHT-CEEEESSC
T ss_pred             EEEECCccccCHHHHHHHHHcC-CCEEECCC
Confidence            9999876656677888888886 66666653

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=95.71  E-value=0.015  Score=52.65  Aligned_cols=76  Identities=20%  Similarity=0.261  Sum_probs=47.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHH--HHHHhcCC--c-eeecCCCCCccHHHHHHHHcCC-CccE
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF--EEAKKFGV--T-DFVNTSEHDRPIQEVIAEMTNG-GVDR  261 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~--~~~~~lg~--~-~vi~~~~~~~~~~~~~~~~~~~-~~d~  261 (373)
                      +++|||+|+ |.+|...++.+...|+ +|++++++.++.  +.+++++.  . .++..+-.+   .+.+.+...+ ++|+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d---~~~~~~~~~~~~~d~   78 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGIENDVKIIHMDLLE---FSNIIRTIEKVQPDE   78 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTC---HHHHHHHHHHHCCSE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccccCceeEEECCCCC---HHHHHHHHHhcCCCE
Confidence            578999998 9999999998888898 899998876542  23444421  1 122111111   1123333222 6899


Q ss_pred             EEEccCC
Q 017336          262 SVECTGN  268 (373)
Q Consensus       262 vid~~g~  268 (373)
                      ||++.+.
T Consensus        79 vih~A~~   85 (345)
T 2z1m_A           79 VYNLAAQ   85 (345)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=95.71  E-value=0.039  Score=44.34  Aligned_cols=101  Identities=20%  Similarity=0.190  Sum_probs=63.3

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHH-HcCCCccEE
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE-MTNGGVDRS  262 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~-~~~~~~d~v  262 (373)
                      .+.++++||-+|+|. |..+..+++..|. .++++++.++ ..+.   -.. .++..+-.+....+.+.. ...+.+|+|
T Consensus        19 ~~~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~---~~~-~~~~~d~~~~~~~~~~~~~~~~~~~D~i   92 (180)
T 1ej0_A           19 LFKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI---VGV-DFLQGDFRDELVMKALLERVGDSKVQVV   92 (180)
T ss_dssp             CCCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC---TTE-EEEESCTTSHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc---CcE-EEEEcccccchhhhhhhccCCCCceeEE
Confidence            367889999999977 7888888888642 3899998876 3221   111 222222222112222333 233489999


Q ss_pred             EEc-----cCC------------hHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          263 VEC-----TGN------------IDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       263 id~-----~g~------------~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      +..     .+.            ...+..+.+.|+++ |.+++....
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~~  138 (180)
T 1ej0_A           93 MSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPG-GSFVVKVFQ  138 (180)
T ss_dssp             EECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEES
T ss_pred             EECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCC-cEEEEEEec
Confidence            983     333            26678889999997 998875443

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=95.70  E-value=0.023  Score=52.07  Aligned_cols=134  Identities=15%  Similarity=0.192  Sum_probs=79.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHH-HhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          190 SSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~~-~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      -+|.|+|+|.+|...+..++.. +++-+.++++++++.+.+ +++|+..   +.+    +.+.+.   ...+|+|+.|+.
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~---~~~----~~~~l~---~~~~D~V~i~tp   75 (354)
T 3db2_A            6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG---DAT----MEALLA---REDVEMVIITVP   75 (354)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC---CSS----HHHHHH---CSSCCEEEECSC
T ss_pred             ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC---cCC----HHHHhc---CCCCCEEEEeCC
Confidence            4789999999998877777666 673344667777776544 5577653   211    333332   237999999999


Q ss_pred             ChHhHHHHHHHhhcCCcEEEEEcCCCCCceeecc-chhhc--ccceEEEEeccCCCCCCCHHHHHHHHHcCCC
Q 017336          268 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  337 (373)
Q Consensus       268 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~--~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l  337 (373)
                      ...+.+.+..++..  |+-+++..+.....-... .....  +++.+.-..  ..+....++.+.+++++|.+
T Consensus        76 ~~~h~~~~~~al~~--gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~--~~R~~p~~~~~k~~i~~g~i  144 (354)
T 3db2_A           76 NDKHAEVIEQCARS--GKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGH--SSRRLGALRKMKEMIDTKEI  144 (354)
T ss_dssp             TTSHHHHHHHHHHT--TCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEEC--GGGGSHHHHHHHHHHHTTTT
T ss_pred             hHHHHHHHHHHHHc--CCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEee--chhcCHHHHHHHHHHhcCCC
Confidence            87888888999987  454555443211100000 01111  333332222  23333457788888888865

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=95.70  E-value=0.056  Score=49.21  Aligned_cols=92  Identities=16%  Similarity=0.132  Sum_probs=63.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      .+|.|+|.|.+|...+..++..|. .|++.++++++.+.++++|+...-     +  ..+.+.+.. ...|+||-|+.. 
T Consensus         9 ~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~~~~~~~a~~~G~~~~~-----~--~~e~~~~a~-~~aDlVilavP~-   78 (341)
T 3ktd_A            9 RPVCILGLGLIGGSLLRDLHAANH-SVFGYNRSRSGAKSAVDEGFDVSA-----D--LEATLQRAA-AEDALIVLAVPM-   78 (341)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHTTCCEES-----C--HHHHHHHHH-HTTCEEEECSCH-
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeeeC-----C--HHHHHHhcc-cCCCEEEEeCCH-
Confidence            579999999999999999999998 899999999999999999874321     1  333343321 147999999985 


Q ss_pred             HhHHHHHH---HhhcCCcEEEEEcCC
Q 017336          270 DNMISAFE---CVHDGWGVAVLVGVP  292 (373)
Q Consensus       270 ~~~~~~~~---~l~~~~g~~v~~g~~  292 (373)
                      ......++   .++++ ..++.++..
T Consensus        79 ~~~~~vl~~l~~~~~~-~iv~Dv~Sv  103 (341)
T 3ktd_A           79 TAIDSLLDAVHTHAPN-NGFTDVVSV  103 (341)
T ss_dssp             HHHHHHHHHHHHHCTT-CCEEECCSC
T ss_pred             HHHHHHHHHHHccCCC-CEEEEcCCC
Confidence            33333332   23454 555556544

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=95.70  E-value=0.024  Score=49.78  Aligned_cols=77  Identities=18%  Similarity=0.206  Sum_probs=48.5

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-eecCCCCC--ccHHHHHHHHcCCCccE
Q 017336          186 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHD--RPIQEVIAEMTNGGVDR  261 (373)
Q Consensus       186 ~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~-vi~~~~~~--~~~~~~~~~~~~~~~d~  261 (373)
                      ...+++|||+|+ |++|.++++.+...|+ +|+++++++++..   . .... ..|..+.+  ..+.+.+.+.. +++|+
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~---~-~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD~   84 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDV---N-VSDHFKIDVTNEEEVKEAVEKTTKKY-GRIDI   84 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CT---T-SSEEEECCTTCHHHHHHHHHHHHHHH-SCCCE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhcc---C-ceeEEEecCCCHHHHHHHHHHHHHHc-CCCCE
Confidence            456899999987 8999999999999999 8999988765531   1 1111 12332221  01222222222 37999


Q ss_pred             EEEccCC
Q 017336          262 SVECTGN  268 (373)
Q Consensus       262 vid~~g~  268 (373)
                      +|++.|.
T Consensus        85 lv~nAg~   91 (269)
T 3vtz_A           85 LVNNAGI   91 (269)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999874

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=95.70  E-value=0.064  Score=50.91  Aligned_cols=93  Identities=11%  Similarity=0.033  Sum_probs=57.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      +++|+|+|+|.+|.+.+..+...|+ +|++++++.++.+.+.+ ++....+..+-.+  + +.+.+... ++|+|+++++
T Consensus         3 ~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d--~-~~l~~~l~-~~DvVIn~a~   77 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDVND--D-AALDAEVA-KHDLVISLIP   77 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSHHHHHHTTTTCTTEEEEECCTTC--H-HHHHHHHT-TSSEEEECCC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCHHHHHHHHHhcCCceEEEeecCC--H-HHHHHHHc-CCcEEEECCc
Confidence            5789999999999999888888898 79999998877665433 3321122111111  2 22333333 6999999998


Q ss_pred             ChHhHHHHHHHhhcCCcEEE
Q 017336          268 NIDNMISAFECVHDGWGVAV  287 (373)
Q Consensus       268 ~~~~~~~~~~~l~~~~g~~v  287 (373)
                      ..........++.++ ..++
T Consensus        78 ~~~~~~i~~a~l~~g-~~vv   96 (450)
T 1ff9_A           78 YTFHATVIKSAIRQK-KHVV   96 (450)
T ss_dssp             --CHHHHHHHHHHHT-CEEE
T ss_pred             cccchHHHHHHHhCC-CeEE
Confidence            633333445556653 4443

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=95.69  E-value=0.031  Score=48.90  Aligned_cols=79  Identities=24%  Similarity=0.286  Sum_probs=49.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHHHHH----HhcCCce-ee--cCCCCCccHHHHHHHHc--C
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT--N  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~-~~~~~~~~----~~lg~~~-vi--~~~~~~~~~~~~~~~~~--~  256 (373)
                      .+++|||+|+ |.+|...+..+...|+ +|+++++ +.++.+.+    ++.+... .+  |..+. ..+.+.+.+..  -
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   97 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKP-SEVVALFDKAVSHF   97 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHc
Confidence            4688999987 8999999999999999 7888887 66554432    3335432 22  32221 11222222211  1


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|++.|.
T Consensus        98 ~~~d~vi~~Ag~  109 (274)
T 1ja9_A           98 GGLDFVMSNSGM  109 (274)
T ss_dssp             SCEEEEECCCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998873

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=95.69  E-value=0.024  Score=49.38  Aligned_cols=78  Identities=13%  Similarity=0.207  Sum_probs=49.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHH---cCCcEEEEEcCChhHHHHHH-hc-----CCce-e--ecCCCCCccHHHHHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARI---AGASRIIGVDRSSKRFEEAK-KF-----GVTD-F--VNTSEHDRPIQEVIAEM  254 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~---~g~~~V~~~~~~~~~~~~~~-~l-----g~~~-v--i~~~~~~~~~~~~~~~~  254 (373)
                      .++++||+|+ |++|.+.+..+..   .|+ +|+++++++++.+.+. ++     +... .  .|..+. ..+.+.+.+.
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~   82 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTE-AGVQRLLSAV   82 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSH-HHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCH-HHHHHHHHHH
Confidence            3678999987 8999998888777   899 8999999887665443 22     3322 1  232221 1233333333


Q ss_pred             cC----CCcc--EEEEccC
Q 017336          255 TN----GGVD--RSVECTG  267 (373)
Q Consensus       255 ~~----~~~d--~vid~~g  267 (373)
                      ..    +++|  +++++.|
T Consensus        83 ~~~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCC
T ss_pred             HhccccccCCccEEEECCc
Confidence            22    3678  9999876

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=95.67  E-value=0.026  Score=49.15  Aligned_cols=79  Identities=25%  Similarity=0.360  Sum_probs=48.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHH-HHHHh----cCCce-e--ecCCCCCccHHHHHHHHc--C
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF-EEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMT--N  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~-~~~~~----lg~~~-v--i~~~~~~~~~~~~~~~~~--~  256 (373)
                      .++++||+|+ |.+|.+.+..+...|+ +|++++++.++. +.+++    .+... .  .|..+.+ .+.+.+.+..  -
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~   90 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTD-IVTKTIQQIDADL   90 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHH-HHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHH-HHHHHHHHHHHhc
Confidence            3578999987 8999999999988998 898888854332 22222    24332 1  2322211 1222232221  1


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|++.|.
T Consensus        91 ~~id~li~~Ag~  102 (265)
T 1h5q_A           91 GPISGLIANAGV  102 (265)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999874

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=95.67  E-value=0.02  Score=51.97  Aligned_cols=90  Identities=19%  Similarity=0.214  Sum_probs=64.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .|++|.|+|.|.+|...++.++.+|+ +|++.+++.++.+...++|+..+      +  +.+.+.     ..|+|+.++.
T Consensus       144 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~------~--l~ell~-----~aDvV~l~~P  209 (330)
T 4e5n_A          144 DNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRLGLRQV------A--CSELFA-----SSDFILLALP  209 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHHTEEEC------C--HHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhcCceeC------C--HHHHHh-----hCCEEEEcCC
Confidence            57899999999999999999999999 89999988755566666776321      1  333232     3688888876


Q ss_pred             Ch----HhH-HHHHHHhhcCCcEEEEEcCC
Q 017336          268 NI----DNM-ISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       268 ~~----~~~-~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ..    ..+ ...+..|+++ ..++.++..
T Consensus       210 ~t~~t~~li~~~~l~~mk~g-ailIN~arg  238 (330)
T 4e5n_A          210 LNADTLHLVNAELLALVRPG-ALLVNPCRG  238 (330)
T ss_dssp             CSTTTTTCBCHHHHTTSCTT-EEEEECSCG
T ss_pred             CCHHHHHHhCHHHHhhCCCC-cEEEECCCC
Confidence            32    122 3667778886 777777653

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=95.67  E-value=0.026  Score=48.56  Aligned_cols=78  Identities=21%  Similarity=0.287  Sum_probs=47.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE-cCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHH---HHc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIA---EMT  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~-~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~---~~~  255 (373)
                      .++++||+|+ |.+|...++.+...|+ +|+++ .+++++.+.+    ++.+... .  .|..+.+ .+.+.+.   +..
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~   81 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPE-DVENMVKTAMDAF   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHH-HHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHH-HHHHHHHHHHHhc
Confidence            4678999987 8999999999999999 78887 5555444332    3334332 2  2322211 1222222   222


Q ss_pred             CCCccEEEEccCC
Q 017336          256 NGGVDRSVECTGN  268 (373)
Q Consensus       256 ~~~~d~vid~~g~  268 (373)
                       +++|++|++.|.
T Consensus        82 -~~~d~vi~~Ag~   93 (247)
T 2hq1_A           82 -GRIDILVNNAGI   93 (247)
T ss_dssp             -SCCCEEEECC--
T ss_pred             -CCCCEEEECCCC
Confidence             379999999874

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=95.66  E-value=0.031  Score=48.06  Aligned_cols=75  Identities=17%  Similarity=0.237  Sum_probs=47.3

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee--cCCCCC--ccHHHHHHHHcC-CCcc
Q 017336          187 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV--NTSEHD--RPIQEVIAEMTN-GGVD  260 (373)
Q Consensus       187 ~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi--~~~~~~--~~~~~~~~~~~~-~~~d  260 (373)
                      ..++++||+|+ |.+|.+.++.+...|+ +|+++++++++.+     +....+  |..+.+  ..+.+.+.+..+ +++|
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD   78 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   78 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhhcc-----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            35789999987 8999999999999999 8999988765432     111111  111110  012222333332 4799


Q ss_pred             EEEEccC
Q 017336          261 RSVECTG  267 (373)
Q Consensus       261 ~vid~~g  267 (373)
                      ++|++.|
T Consensus        79 ~lv~~Ag   85 (241)
T 1dhr_A           79 AILCVAG   85 (241)
T ss_dssp             EEEECCC
T ss_pred             EEEEccc
Confidence            9999987

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=95.66  E-value=0.075  Score=47.74  Aligned_cols=88  Identities=15%  Similarity=0.205  Sum_probs=60.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      .+|.|+|+|.+|...+..+...|. .|+++++++++.+.+.+.|...   ..  +  ..+.+.     ..|+||.|+..+
T Consensus        31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~~--~--~~~~~~-----~~DvVi~av~~~   97 (316)
T 2uyy_A           31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRTAEKCDLFIQEGARL---GR--T--PAEVVS-----TCDITFACVSDP   97 (316)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSGGGGHHHHHTTCEE---CS--C--HHHHHH-----HCSEEEECCSSH
T ss_pred             CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHcCCEE---cC--C--HHHHHh-----cCCEEEEeCCCH
Confidence            579999999999998888888898 7999999998888887776532   11  1  222221     378999998865


Q ss_pred             HhHHHHHH-------HhhcCCcEEEEEcC
Q 017336          270 DNMISAFE-------CVHDGWGVAVLVGV  291 (373)
Q Consensus       270 ~~~~~~~~-------~l~~~~g~~v~~g~  291 (373)
                      ......+.       .+.++ ..++.++.
T Consensus        98 ~~~~~v~~~~~~~~~~l~~~-~~vv~~s~  125 (316)
T 2uyy_A           98 KAAKDLVLGPSGVLQGIRPG-KCYVDMST  125 (316)
T ss_dssp             HHHHHHHHSTTCGGGGCCTT-CEEEECSC
T ss_pred             HHHHHHHcCchhHhhcCCCC-CEEEECCC
Confidence            55555543       34454 55555543

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=95.64  E-value=0.065  Score=49.57  Aligned_cols=134  Identities=15%  Similarity=0.157  Sum_probs=78.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHH--------cCCcEEEEEcCChhHHH-HHHhcCCceeecCCCCCccHHHHHHHHcCCCcc
Q 017336          190 SSVAVFGLGAVGLAAAEGARI--------AGASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD  260 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~--------~g~~~V~~~~~~~~~~~-~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d  260 (373)
                      =+|.|+|+|.+|..-+...+.        -+++-|.++++++++.+ .++++|...++..      +.+.+.+   ..+|
T Consensus        26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d------~~ell~~---~~iD   96 (393)
T 4fb5_A           26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATAD------WRALIAD---PEVD   96 (393)
T ss_dssp             CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESC------HHHHHHC---TTCC
T ss_pred             ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCC------HHHHhcC---CCCc
Confidence            479999999999754433322        14534445566666554 5567888765421      3333322   3799


Q ss_pred             EEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc--hhhc--ccceEEEEeccCCCCCCCHHHHHHHHHcCC
Q 017336          261 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP--INVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQ  336 (373)
Q Consensus       261 ~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~--~~~~--~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~  336 (373)
                      +|+.|+....+.+.+..+|..  |+=|++..+-.. +..-..  ....  +++.+.-..  .++....++.+-+++++|+
T Consensus        97 aV~IatP~~~H~~~a~~al~a--GkhVl~EKPla~-~~~ea~~l~~~a~~~g~~l~vg~--~~R~~p~~~~~k~~i~~G~  171 (393)
T 4fb5_A           97 VVSVTTPNQFHAEMAIAALEA--GKHVWCEKPMAP-AYADAERMLATAERSGKVAALGY--NYIQNPVMRHIRKLVGDGV  171 (393)
T ss_dssp             EEEECSCGGGHHHHHHHHHHT--TCEEEECSCSCS-SHHHHHHHHHHHHHSSSCEEECC--GGGGCHHHHHHHHHHHTTT
T ss_pred             EEEECCChHHHHHHHHHHHhc--CCeEEEccCCcc-cHHHHHHhhhhHHhcCCcccccc--ccccChHHHHHHHHHHcCC
Confidence            999999988889999999997  677777554311 111000  1111  333332211  2333345778888889886


Q ss_pred             C
Q 017336          337 L  337 (373)
Q Consensus       337 l  337 (373)
                      +
T Consensus       172 i  172 (393)
T 4fb5_A          172 I  172 (393)
T ss_dssp             T
T ss_pred             C
Confidence            5

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=95.63  E-value=0.016  Score=50.55  Aligned_cols=74  Identities=23%  Similarity=0.271  Sum_probs=47.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-eecCCCCCccHHHHHHHHc--CCCccEEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMT--NGGVDRSV  263 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~-vi~~~~~~~~~~~~~~~~~--~~~~d~vi  263 (373)
                      .++++||+|+ |.+|.+.++.+...|+ +|++++++.++.+.     +.. ..|..+.+ .+.+.+.+..  -+++|++|
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~~Dl~d~~-~v~~~~~~~~~~~g~iD~lv   92 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPEG-----FLAVKCDITDTE-QVEQAYKEIEETHGPVEVLI   92 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTT-----SEEEECCTTSHH-HHHHHHHHHHHHTCSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHhhcc-----ceEEEecCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence            3688999987 8999999999999999 89888887654321     211 12332211 1222222211  23789999


Q ss_pred             EccCC
Q 017336          264 ECTGN  268 (373)
Q Consensus       264 d~~g~  268 (373)
                      ++.|.
T Consensus        93 ~nAg~   97 (253)
T 2nm0_A           93 ANAGV   97 (253)
T ss_dssp             EECSC
T ss_pred             ECCCC
Confidence            98874

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.63  E-value=0.025  Score=48.48  Aligned_cols=73  Identities=25%  Similarity=0.266  Sum_probs=46.5

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCc-c---HHHHHHHHcC-CCccEE
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR-P---IQEVIAEMTN-GGVDRS  262 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~-~---~~~~~~~~~~-~~~d~v  262 (373)
                      ++++||+|+ |.+|.+.++.+...|+ +|+++++++++.+     +....+..+-.+. .   +.+.+.+..+ +++|++
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCccccc-----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            578999987 8999999999999999 8999988765532     1111111111111 1   2222323332 479999


Q ss_pred             EEccC
Q 017336          263 VECTG  267 (373)
Q Consensus       263 id~~g  267 (373)
                      |++.|
T Consensus        77 v~~Ag   81 (236)
T 1ooe_A           77 FCVAG   81 (236)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99988

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=95.61  E-value=0.044  Score=49.51  Aligned_cols=90  Identities=12%  Similarity=0.172  Sum_probs=64.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcC-ChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR-SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~-~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      -.+++|.|+|.|.+|...++.++.+|. +|++.++ +.++ +.+.++|+.. .   + +  +.+.+.     ..|+|+.+
T Consensus       144 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~-~---~-~--l~ell~-----~aDvVil~  209 (320)
T 1gdh_A          144 LDNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASS-SDEASYQATF-H---D-S--LDSLLS-----VSQFFSLN  209 (320)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCH-HHHHHHTCEE-C---S-S--HHHHHH-----HCSEEEEC
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcCh-hhhhhcCcEE-c---C-C--HHHHHh-----hCCEEEEe
Confidence            367899999999999999999999998 8999988 7665 3556677642 1   1 1  323222     47999998


Q ss_pred             cCChH----hH-HHHHHHhhcCCcEEEEEcC
Q 017336          266 TGNID----NM-ISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       266 ~g~~~----~~-~~~~~~l~~~~g~~v~~g~  291 (373)
                      +...+    .+ ...+..|+++ ..++.++.
T Consensus       210 ~p~~~~t~~~i~~~~l~~mk~g-ailIn~ar  239 (320)
T 1gdh_A          210 APSTPETRYFFNKATIKSLPQG-AIVVNTAR  239 (320)
T ss_dssp             CCCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             ccCchHHHhhcCHHHHhhCCCC-cEEEECCC
Confidence            77422    22 3466778886 77777765

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=95.60  E-value=0.096  Score=46.29  Aligned_cols=41  Identities=27%  Similarity=0.412  Sum_probs=36.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  231 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~  231 (373)
                      ++|.|+|+|.+|...++.+...|+ +|++.++++++.+.+++
T Consensus         5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHH
Confidence            689999999999999999999999 89999999988777654

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=95.60  E-value=0.086  Score=50.89  Aligned_cols=79  Identities=19%  Similarity=0.254  Sum_probs=51.9

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH-------HHHHHhcCCce-ee--cCCCCCccHHHHHHHH
Q 017336          186 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-------FEEAKKFGVTD-FV--NTSEHDRPIQEVIAEM  254 (373)
Q Consensus       186 ~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~-------~~~~~~lg~~~-vi--~~~~~~~~~~~~~~~~  254 (373)
                      ++++++|||+|+ |.+|...+..+...|+++|+.++++...       .+.+++.|... ++  |..+. ..+.+.+.+ 
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~-~~v~~~~~~-  333 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAER-DALAALVTA-  333 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCH-HHHHHHHHH-
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCH-HHHHHHHhc-
Confidence            568899999987 9999999998888898678888787531       23344456543 22  22221 112222322 


Q ss_pred             cCCCccEEEEccCC
Q 017336          255 TNGGVDRSVECTGN  268 (373)
Q Consensus       255 ~~~~~d~vid~~g~  268 (373)
                        +++|+||++.|.
T Consensus       334 --~~ld~VVh~AGv  345 (511)
T 2z5l_A          334 --YPPNAVFHTAGI  345 (511)
T ss_dssp             --SCCSEEEECCCC
T ss_pred             --CCCcEEEECCcc
Confidence              479999999873

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=95.60  E-value=0.032  Score=47.96  Aligned_cols=77  Identities=19%  Similarity=0.233  Sum_probs=49.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCc------EEEEEcCChhHHHHHHh----cCCce-ee--cCCCCCccHHHH---H
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGAS------RIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHDRPIQEV---I  251 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~------~V~~~~~~~~~~~~~~~----lg~~~-vi--~~~~~~~~~~~~---~  251 (373)
                      +++|||+|+ |.+|...+..+...|+.      +|++++++.++.+.+.+    .+... ++  |..+.+ .+.+.   +
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~   80 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMA-DVRRLTTHI   80 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHH-HHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHH-HHHHHHHHH
Confidence            568999987 89999999888888874      68888888776654432    24322 22  222211 12222   2


Q ss_pred             HHHcCCCccEEEEccC
Q 017336          252 AEMTNGGVDRSVECTG  267 (373)
Q Consensus       252 ~~~~~~~~d~vid~~g  267 (373)
                      .+.. +++|++|++.|
T Consensus        81 ~~~~-g~id~li~~Ag   95 (244)
T 2bd0_A           81 VERY-GHIDCLVNNAG   95 (244)
T ss_dssp             HHHT-SCCSEEEECCC
T ss_pred             HHhC-CCCCEEEEcCC
Confidence            2222 37999999987

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=95.58  E-value=0.052  Score=47.86  Aligned_cols=79  Identities=15%  Similarity=0.232  Sum_probs=49.6

Q ss_pred             CCCEEEEECC-CH--HHHHHHHHHHHcCCcEEEEEcCCh--hHHHHHHh-cCCceee--cCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GA--VGLAAAEGARIAGASRIIGVDRSS--KRFEEAKK-FGVTDFV--NTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~--~G~~ai~la~~~g~~~V~~~~~~~--~~~~~~~~-lg~~~vi--~~~~~~--~~~~~~~~~~~~~  257 (373)
                      .++++||+|+ |.  +|.+.++.+...|+ +|++++++.  +..+.+.+ .+--..+  |..+.+  ..+.+.+.+.. +
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g  102 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVW-D  102 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHC-S
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHc-C
Confidence            4689999985 44  99999998889999 899988876  55555533 3322222  322211  11222232322 3


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|++|++.|.
T Consensus       103 ~id~li~nAg~  113 (280)
T 3nrc_A          103 GLDAIVHSIAF  113 (280)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999874

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=95.58  E-value=0.05  Score=47.90  Aligned_cols=90  Identities=17%  Similarity=0.186  Sum_probs=62.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      .+|||+|+|.+|...+..+...|. +|+++++++++.+.+...++..+ .|..+    +    .   -.++|+||++.+.
T Consensus         6 ~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~d----~----~---~~~~d~vi~~a~~   73 (286)
T 3ius_A            6 GTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRASGAEPLLWPGEE----P----S---LDGVTHLLISTAP   73 (286)
T ss_dssp             CEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHHTTEEEEESSSSC----C----C---CTTCCEEEECCCC
T ss_pred             CcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhhCCCeEEEecccc----c----c---cCCCCEEEECCCc
Confidence            589999999999999999988898 89999999988887777666543 22222    1    1   2379999999874


Q ss_pred             h----HhHHHHHHHhhc---CCcEEEEEcC
Q 017336          269 I----DNMISAFECVHD---GWGVAVLVGV  291 (373)
Q Consensus       269 ~----~~~~~~~~~l~~---~~g~~v~~g~  291 (373)
                      .    ......++.+..   +..+++.++.
T Consensus        74 ~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss  103 (286)
T 3ius_A           74 DSGGDPVLAALGDQIAARAAQFRWVGYLST  103 (286)
T ss_dssp             BTTBCHHHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred             cccccHHHHHHHHHHHhhcCCceEEEEeec
Confidence            2    223334444433   1257887764

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=95.58  E-value=0.035  Score=47.95  Aligned_cols=79  Identities=23%  Similarity=0.268  Sum_probs=48.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHHHHH----HhcCCcee-e--cCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTDF-V--NTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~-~~~~~~~~----~~lg~~~v-i--~~~~~~--~~~~~~~~~~~~  256 (373)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++ +.++.+.+    ++.+.... +  |..+.+  ..+.+.+.+.. 
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-   80 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-   80 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            3678999987 8999999999999999 7777655 44444332    33454332 2  222211  01222222222 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|+++++.|.
T Consensus        81 g~id~lv~nAg~   92 (246)
T 3osu_A           81 GSLDVLVNNAGI   92 (246)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999874

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=95.56  E-value=0.0077  Score=53.24  Aligned_cols=70  Identities=13%  Similarity=0.162  Sum_probs=49.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .+++++|+|+|++|.+++..+...|+++|++++|+.++.+.+.+ ... ...       + +.+.+.. ..+|+||++++
T Consensus       116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-~~~-~~~-------~-~~~~~~~-~~aDiVInaTp  184 (277)
T 3don_A          116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-NIN-KIN-------L-SHAESHL-DEFDIIINTTP  184 (277)
T ss_dssp             GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-CCE-EEC-------H-HHHHHTG-GGCSEEEECCC
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-hcc-ccc-------H-hhHHHHh-cCCCEEEECcc
Confidence            57899999999999999999999998789999998877544332 111 110       2 2233322 26899999987


Q ss_pred             C
Q 017336          268 N  268 (373)
Q Consensus       268 ~  268 (373)
                      .
T Consensus       185 ~  185 (277)
T 3don_A          185 A  185 (277)
T ss_dssp             -
T ss_pred             C
Confidence            5

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=95.56  E-value=0.052  Score=48.61  Aligned_cols=73  Identities=12%  Similarity=0.147  Sum_probs=46.2

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHcC-CCccEE
Q 017336          186 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTN-GGVDRS  262 (373)
Q Consensus       186 ~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~-~~~d~v  262 (373)
                      -.+.++|||+|+ |.+|...++.+...|+ +|++++++..+ +.   +++..+ .|..+.     +.+.+... +++|+|
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~-~~---l~~~~~~~Dl~d~-----~~~~~~~~~~~~d~v   78 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNV-EVFGTSRNNEA-KL---PNVEMISLDIMDS-----QRVKKVISDIKPDYI   78 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCTTC-CC---TTEEEEECCTTCH-----HHHHHHHHHHCCSEE
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcc-cc---ceeeEEECCCCCH-----HHHHHHHHhcCCCEE
Confidence            346688999987 9999999999988998 89999887654 21   233222 222221     12333222 268999


Q ss_pred             EEccCC
Q 017336          263 VECTGN  268 (373)
Q Consensus       263 id~~g~  268 (373)
                      |++.+.
T Consensus        79 ih~A~~   84 (321)
T 2pk3_A           79 FHLAAK   84 (321)
T ss_dssp             EECCSC
T ss_pred             EEcCcc
Confidence            999874

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=95.55  E-value=0.014  Score=52.76  Aligned_cols=80  Identities=13%  Similarity=0.083  Sum_probs=46.9

Q ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH--HHHHHhc----CCceeecCCCCCccHHHHHHHHcC
Q 017336          184 AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       184 ~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~--~~~~~~l----g~~~vi~~~~~~~~~~~~~~~~~~  256 (373)
                      ....++.+|||+|+ |.+|...++.+...|. +|++++++.++  .+.++.+    ++. ++..+-.+   .+.+.+...
T Consensus         9 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d---~~~~~~~~~   83 (335)
T 1rpn_A            9 HHGSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIEGDIQ-YEDGDMAD---ACSVQRAVI   83 (335)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCGGGEE-EEECCTTC---HHHHHHHHH
T ss_pred             cccccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccccCceE-EEECCCCC---HHHHHHHHH
Confidence            34568899999987 9999999999988898 89998886543  1223333    122 22111111   122333333


Q ss_pred             C-CccEEEEccCC
Q 017336          257 G-GVDRSVECTGN  268 (373)
Q Consensus       257 ~-~~d~vid~~g~  268 (373)
                      + ++|+||++.+.
T Consensus        84 ~~~~d~Vih~A~~   96 (335)
T 1rpn_A           84 KAQPQEVYNLAAQ   96 (335)
T ss_dssp             HHCCSEEEECCSC
T ss_pred             HcCCCEEEECccc
Confidence            3 68999999874

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=95.55  E-value=0.056  Score=46.91  Aligned_cols=100  Identities=17%  Similarity=0.256  Sum_probs=66.8

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCce--eecCCCCCccHHHHHHHH
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTD--FVNTSEHDRPIQEVIAEM  254 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l----g~~~--vi~~~~~~~~~~~~~~~~  254 (373)
                      .......++.+||-+|+| .|..+..+++.. . +|++++.+++..+.+++.    +...  ++..+..+  +     .+
T Consensus        30 ~~~l~~~~~~~vLDiGcG-~G~~~~~l~~~~-~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~--l-----~~   99 (260)
T 1vl5_A           30 MQIAALKGNEEVLDVATG-GGHVANAFAPFV-K-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQ--M-----PF   99 (260)
T ss_dssp             HHHHTCCSCCEEEEETCT-TCHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-C--C-----CS
T ss_pred             HHHhCCCCCCEEEEEeCC-CCHHHHHHHHhC-C-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHh--C-----CC
Confidence            344566788999999987 477777777664 4 899999999888777653    3322  22111111  0     01


Q ss_pred             cCCCccEEEEccCC------hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          255 TNGGVDRSVECTGN------IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       255 ~~~~~d~vid~~g~------~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..+.||+|+....-      ...+..+.+.|+|+ |++++...
T Consensus       100 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~~~~~  141 (260)
T 1vl5_A          100 TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVDN  141 (260)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCC-CEEEEEEc
Confidence            22379999986432      25688999999997 99988643

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=95.54  E-value=0.069  Score=48.52  Aligned_cols=74  Identities=20%  Similarity=0.294  Sum_probs=49.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh----hHHHHHHhc-------CCceeecCCCCCccHHHHHHHHcC
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS----KRFEEAKKF-------GVTDFVNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~----~~~~~~~~l-------g~~~vi~~~~~~~~~~~~~~~~~~  256 (373)
                      +++|||+|+ |.+|...++.+...|. +|++++++.    +..+.+++.       ++. ++..+-.+   .+.+.+...
T Consensus        25 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d---~~~~~~~~~   99 (351)
T 3ruf_A           25 PKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFC-FIEGDIRD---LTTCEQVMK   99 (351)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEE-EEECCTTC---HHHHHHHTT
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceE-EEEccCCC---HHHHHHHhc
Confidence            579999997 9999999999999998 899998843    333334332       222 22222112   123444444


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                       ++|+||++.+.
T Consensus       100 -~~d~Vih~A~~  110 (351)
T 3ruf_A          100 -GVDHVLHQAAL  110 (351)
T ss_dssp             -TCSEEEECCCC
T ss_pred             -CCCEEEECCcc
Confidence             79999999874

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=95.54  E-value=0.031  Score=48.60  Aligned_cols=78  Identities=19%  Similarity=0.316  Sum_probs=49.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC--CcEEEEEcCChhHHHHHHh-cCCce-e--ecCCCCC--ccHHHHHHHHcCCCc
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAG--ASRIIGVDRSSKRFEEAKK-FGVTD-F--VNTSEHD--RPIQEVIAEMTNGGV  259 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g--~~~V~~~~~~~~~~~~~~~-lg~~~-v--i~~~~~~--~~~~~~~~~~~~~~~  259 (373)
                      ++++||+|+ +++|.+.++.+...|  + +|+.+++++++.+.+.+ ++... .  .|..+.+  ..+.+.+.+.. +++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   79 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGH-GKI   79 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhc-CCc
Confidence            578999987 899999887766664  5 88888898887666543 44332 1  2322211  01222222222 379


Q ss_pred             cEEEEccCC
Q 017336          260 DRSVECTGN  268 (373)
Q Consensus       260 d~vid~~g~  268 (373)
                      |+++++.|.
T Consensus        80 d~lvnnAg~   88 (254)
T 3kzv_A           80 DSLVANAGV   88 (254)
T ss_dssp             CEEEEECCC
T ss_pred             cEEEECCcc
Confidence            999999874

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=95.54  E-value=0.036  Score=47.78  Aligned_cols=94  Identities=26%  Similarity=0.291  Sum_probs=55.4

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      ++|||+|+ |.+|..++..+...|+ +|++++++.++.+.      ....|..+. ..+.+.+.++ .+++|++|++.|.
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~------~~~~D~~~~-~~~~~~~~~~-~~~~d~vi~~Ag~   72 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGH-TVIGIDRGQADIEA------DLSTPGGRE-TAVAAVLDRC-GGVLDGLVCCAGV   72 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------CTTSHHHHH-HHHHHHHHHH-TTCCSEEEECCCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCChhHccc------cccCCcccH-HHHHHHHHHc-CCCccEEEECCCC
Confidence            47999987 9999999998888998 89999887654210      000010000 0122222222 2479999998874


Q ss_pred             hH------------------hHHHHHHHhhc-CCcEEEEEcCC
Q 017336          269 ID------------------NMISAFECVHD-GWGVAVLVGVP  292 (373)
Q Consensus       269 ~~------------------~~~~~~~~l~~-~~g~~v~~g~~  292 (373)
                      ..                  .++.+.+.+.. +.++++.++..
T Consensus        73 ~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~  115 (255)
T 2dkn_A           73 GVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSI  115 (255)
T ss_dssp             CTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred             CCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecc
Confidence            21                  12333344433 12789888764

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=95.53  E-value=0.034  Score=49.35  Aligned_cols=74  Identities=20%  Similarity=0.241  Sum_probs=50.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hc----CCce-eecCCCCCccHHHHHHHHcCCCcc
Q 017336          188 RGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF----GVTD-FVNTSEHDRPIQEVIAEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G-~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~l----g~~~-vi~~~~~~~~~~~~~~~~~~~~~d  260 (373)
                      +++++||+| +|++|.+++..+...|+ +|++++++.++.+.+. ++    ++.. ..|..+.     +.+.+... .+|
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~-----~~~~~~~~-~~D  190 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD-----ASRAEAVK-GAH  190 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH-----HHHHHHTT-TCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCH-----HHHHHHHH-hCC
Confidence            678999999 59999999999999999 6999999877765442 22    3222 2233221     22333333 589


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      ++++++|.
T Consensus       191 vlVn~ag~  198 (287)
T 1lu9_A          191 FVFTAGAI  198 (287)
T ss_dssp             EEEECCCT
T ss_pred             EEEECCCc
Confidence            99999973

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=95.52  E-value=0.049  Score=47.59  Aligned_cols=102  Identities=17%  Similarity=0.260  Sum_probs=69.1

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCc---eeecCCCCCccHHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVT---DFVNTSEHDRPIQEVIA  252 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l----g~~---~vi~~~~~~~~~~~~~~  252 (373)
                      +.....+.++.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++.    |..   .++..+-.+  +     
T Consensus        53 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~-----  123 (273)
T 3bus_A           53 MIALLDVRSGDRVLDVGCGI-GKPAVRLATARDV-RVTGISISRPQVNQANARATAAGLANRVTFSYADAMD--L-----  123 (273)
T ss_dssp             HHHHSCCCTTCEEEEESCTT-SHHHHHHHHHSCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS--C-----
T ss_pred             HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcccc--C-----
Confidence            44556788999999999876 7778888888887 899999999887777542    432   122111111  0     


Q ss_pred             HHcCCCccEEEEccC------ChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          253 EMTNGGVDRSVECTG------NIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       253 ~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ....+.||+|+....      ....+..+.+.|+++ |++++...
T Consensus       124 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~  167 (273)
T 3bus_A          124 PFEDASFDAVWALESLHHMPDRGRALREMARVLRPG-GTVAIADF  167 (273)
T ss_dssp             CSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEE-EEEEEEEE
T ss_pred             CCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence            011237999986421      225678889999997 99887653

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=95.52  E-value=0.047  Score=48.93  Aligned_cols=99  Identities=14%  Similarity=0.158  Sum_probs=64.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC------C--ceeecCCCCCccHHHHHHHHcCC
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG------V--TDFVNTSEHDRPIQEVIAEMTNG  257 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg------~--~~vi~~~~~~~~~~~~~~~~~~~  257 (373)
                      ...+++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-      .  ..+ .....+  ..+.+.. ..+
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv-~v~~~D--a~~~l~~-~~~  167 (304)
T 2o07_A           93 HPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKL-TLHVGD--GFEFMKQ-NQD  167 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTE-EEEESC--HHHHHHT-CSS
T ss_pred             CCCCCEEEEECCCc-hHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcE-EEEECc--HHHHHhh-CCC
Confidence            34568999998764 666677777655459999999999888887631      1  111 111112  3333332 234


Q ss_pred             CccEEEEccCC----------hHhHHHHHHHhhcCCcEEEEEc
Q 017336          258 GVDRSVECTGN----------IDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       258 ~~d~vid~~g~----------~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      .||+||.-...          .+++..+.+.|+++ |.++...
T Consensus       168 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  209 (304)
T 2o07_A          168 AFDVIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQG  209 (304)
T ss_dssp             CEEEEEEECC-----------CHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CceEEEECCCCCCCcchhhhHHHHHHHHHhccCCC-eEEEEec
Confidence            79998843222          25788999999997 9988754

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=95.50  E-value=0.076  Score=47.07  Aligned_cols=97  Identities=15%  Similarity=0.085  Sum_probs=67.1

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc---eeecCCCCCccHHHHHHHHcCC
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT---DFVNTSEHDRPIQEVIAEMTNG  257 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~---~vi~~~~~~~~~~~~~~~~~~~  257 (373)
                      .+.++.+||-+|+| .|..+..+++..|+ +|++++.++...+.+++    .|..   .++..+-.+  +     .+..+
T Consensus        79 ~~~~~~~vLDiGcG-~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~-----~~~~~  149 (297)
T 2o57_A           79 VLQRQAKGLDLGAG-YGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLE--I-----PCEDN  149 (297)
T ss_dssp             CCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTS--C-----SSCTT
T ss_pred             CCCCCCEEEEeCCC-CCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCccc--C-----CCCCC
Confidence            77889999999987 47778888888788 89999999988777654    3331   122111111  0     01123


Q ss_pred             CccEEEEccCC------hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          258 GVDRSVECTGN------IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       258 ~~d~vid~~g~------~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      .||+|+....-      ...+..+.+.|+|+ |++++...
T Consensus       150 ~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  188 (297)
T 2o57_A          150 SYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  188 (297)
T ss_dssp             CEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CEeEEEecchhhhcCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence            79999975331      35688999999997 99987754

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=95.50  E-value=0.027  Score=49.92  Aligned_cols=98  Identities=15%  Similarity=0.133  Sum_probs=64.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc-CC-------ceeecCCCCCccHHHHHHHHcCCC
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GV-------TDFVNTSEHDRPIQEVIAEMTNGG  258 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l-g~-------~~vi~~~~~~~~~~~~~~~~~~~~  258 (373)
                      .++++||++|+|. |..+..+++..+..+|++++.+++-.+.+++. ..       ..+ .....+  ..+.+... .+.
T Consensus        77 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v-~~~~~D--~~~~l~~~-~~~  151 (283)
T 2i7c_A           77 KEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRV-NVFIED--ASKFLENV-TNT  151 (283)
T ss_dssp             SSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTE-EEEESC--HHHHHHHC-CSC
T ss_pred             CCCCeEEEEeCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcE-EEEECC--hHHHHHhC-CCC
Confidence            4568999998764 55566667665445999999999988888763 21       111 111112  43334332 448


Q ss_pred             ccEEEEccC----------ChHhHHHHHHHhhcCCcEEEEEc
Q 017336          259 VDRSVECTG----------NIDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       259 ~d~vid~~g----------~~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      +|+|+.-..          ..+++..+.+.|+++ |.++...
T Consensus       152 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~~  192 (283)
T 2i7c_A          152 YDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPN-GYCVAQC  192 (283)
T ss_dssp             EEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             ceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEC
Confidence            999886221          136788999999997 9998764

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=95.50  E-value=0.13  Score=45.67  Aligned_cols=87  Identities=20%  Similarity=0.202  Sum_probs=59.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      .+|.|+|+|.+|...+..+...|. .|+++++++++.+.+.+.|+..   ..+    ..+.+.     ..|+||.|+..+
T Consensus         5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~~~----~~~~~~-----~~D~vi~~vp~~   71 (301)
T 3cky_A            5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLMEANVAAVVAQGAQA---CEN----NQKVAA-----ASDIIFTSLPNA   71 (301)
T ss_dssp             CEEEEECCCTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHTTTCEE---CSS----HHHHHH-----HCSEEEECCSSH
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCee---cCC----HHHHHh-----CCCEEEEECCCH
Confidence            579999999999998888888898 8999999998888877766531   111    323222     379999999765


Q ss_pred             HhHHHHH-------HHhhcCCcEEEEEc
Q 017336          270 DNMISAF-------ECVHDGWGVAVLVG  290 (373)
Q Consensus       270 ~~~~~~~-------~~l~~~~g~~v~~g  290 (373)
                      ......+       ..+.++ ..++.+.
T Consensus        72 ~~~~~v~~~~~~l~~~l~~~-~~vv~~~   98 (301)
T 3cky_A           72 GIVETVMNGPGGVLSACKAG-TVIVDMS   98 (301)
T ss_dssp             HHHHHHHHSTTCHHHHSCTT-CEEEECC
T ss_pred             HHHHHHHcCcchHhhcCCCC-CEEEECC
Confidence            5454444       345554 5555543

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.50  E-value=0.017  Score=50.90  Aligned_cols=77  Identities=17%  Similarity=0.270  Sum_probs=56.4

Q ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336          186 PERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       186 ~~~~~~vlI~G~g-~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid  264 (373)
                      --.+++++|+|.| .+|.-+++++...|+ +|+++.+..                   .+  +.+.++     .+|+||.
T Consensus       156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~t-------------------~~--L~~~~~-----~ADIVI~  208 (288)
T 1b0a_A          156 DTFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFT-------------------KN--LRHHVE-----NADLLIV  208 (288)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSC-------------------SC--HHHHHH-----HCSEEEE
T ss_pred             CCCCCEEEEECCChHHHHHHHHHHHHCCC-eEEEEeCCc-------------------hh--HHHHhc-----cCCEEEE
Confidence            3578999999997 689999999999999 888884322                   11  333333     3799999


Q ss_pred             ccCChHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          265 CTGNIDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       265 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ++|.+.++.  -+.++++ ..++.+|..
T Consensus       209 Avg~p~lI~--~~~vk~G-avVIDVgi~  233 (288)
T 1b0a_A          209 AVGKPGFIP--GDWIKEG-AIVIDVGIN  233 (288)
T ss_dssp             CSCCTTCBC--TTTSCTT-CEEEECCCE
T ss_pred             CCCCcCcCC--HHHcCCC-cEEEEccCC
Confidence            999876533  2346886 888888765

>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}

Probab=95.50  E-value=0.052  Score=48.23  Aligned_cols=45  Identities=29%  Similarity=0.343  Sum_probs=36.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF  232 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l  232 (373)
                      .++++||=+|+|. |..++.+++..+..+|++++.++.-.+.+++.
T Consensus        45 ~~~~~VLDiGCG~-G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~   89 (292)
T 3g07_A           45 FRGRDVLDLGCNV-GHLTLSIACKWGPSRMVGLDIDSRLIHSARQN   89 (292)
T ss_dssp             TTTSEEEEESCTT-CHHHHHHHHHTCCSEEEEEESCHHHHHHHHHT
T ss_pred             cCCCcEEEeCCCC-CHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH
Confidence            3678999999875 78888899988655999999999888887653

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=95.49  E-value=0.01  Score=51.95  Aligned_cols=75  Identities=19%  Similarity=0.213  Sum_probs=47.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHH---HHHHHcCCCccEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQE---VIAEMTNGGVDRS  262 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~---~~~~~~~~~~d~v  262 (373)
                      .++++||+|+ |++|.+.+..+...|+ +|++++++.++.+.   ..+..+ .|..+.+ .+.+   .+.+.. +++|++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~---~~~~~~~~Dv~d~~-~v~~~~~~~~~~~-g~iD~l  100 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSAD---PDIHTVAGDISKPE-TADRIVREGIERF-GRIDSL  100 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSS---TTEEEEESCTTSHH-HHHHHHHHHHHHH-SCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccc---CceEEEEccCCCHH-HHHHHHHHHHHHC-CCCCEE
Confidence            4689999987 8999999999999999 89999887654211   122111 2222211 1222   222222 379999


Q ss_pred             EEccCC
Q 017336          263 VECTGN  268 (373)
Q Consensus       263 id~~g~  268 (373)
                      +++.|.
T Consensus       101 v~nAg~  106 (260)
T 3un1_A          101 VNNAGV  106 (260)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=95.48  E-value=0.034  Score=49.49  Aligned_cols=92  Identities=15%  Similarity=0.256  Sum_probs=57.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh-------hHHHHHH---hcCCcee-ecCCCCCccHHHHHHHHcC
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-------KRFEEAK---KFGVTDF-VNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~-------~~~~~~~---~lg~~~v-i~~~~~~~~~~~~~~~~~~  256 (373)
                      .++|||+|+ |.+|...+..+...|. +|++++++.       ++.+.++   ..++..+ .|..+    . +.+.+...
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d----~-~~l~~~~~   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTITAANPETKEELIDNYQSLGVILLEGDIND----H-ETLVKAIK   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTC----H-HHHHHHHT
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCC----H-HHHHHHHh
Confidence            467999998 9999999998888898 788888876       5544443   3455433 23322    1 23444433


Q ss_pred             CCccEEEEccCCh--HhHHHHHHHhhcC--CcEEE
Q 017336          257 GGVDRSVECTGNI--DNMISAFECVHDG--WGVAV  287 (373)
Q Consensus       257 ~~~d~vid~~g~~--~~~~~~~~~l~~~--~g~~v  287 (373)
                       ++|+||++.+..  ......++.+...  ..+++
T Consensus        76 -~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           76 -QVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             -TCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             -CCCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence             699999998752  2233444444432  14665

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.48  E-value=0.054  Score=47.10  Aligned_cols=34  Identities=32%  Similarity=0.407  Sum_probs=30.3

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      +.+|+|+|+|++|..++..+...|.+++..++.+
T Consensus        28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            5799999999999999999999999888888654

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=95.47  E-value=0.052  Score=47.41  Aligned_cols=79  Identities=22%  Similarity=0.289  Sum_probs=49.1

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCcEEEEEcCCh---hHHHHHHh-cCCceee--cCCCCCccHHHHHHHHcC--
Q 017336          188 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSS---KRFEEAKK-FGVTDFV--NTSEHDRPIQEVIAEMTN--  256 (373)
Q Consensus       188 ~~~~vlI~G~---g~~G~~ai~la~~~g~~~V~~~~~~~---~~~~~~~~-lg~~~vi--~~~~~~~~~~~~~~~~~~--  256 (373)
                      .++++||+|+   |.+|.++++.+...|+ +|+++++++   +..+.+.+ .+...++  |..+.+ .+.+.+.+...  
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~   85 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDA-SIDTMFAELGKVW   85 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHH-HHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHH-HHHHHHHHHHHHc
Confidence            4688999985   6999999999988999 798888876   33333322 2322222  332211 13333333322  


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|++.|.
T Consensus        86 g~iD~lv~~Ag~   97 (265)
T 1qsg_A           86 PKFDGFVHSIGF   97 (265)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            279999999873

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.47  E-value=0.028  Score=50.44  Aligned_cols=99  Identities=15%  Similarity=0.221  Sum_probs=60.8

Q ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHcCCcEEEEEcCChhH-HHHHHhcCCce--eecCCCCCccHHHHHHHHcCCCccEE
Q 017336          187 ERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRS  262 (373)
Q Consensus       187 ~~~~~vlI~G~g-~~G~~ai~la~~~g~~~V~~~~~~~~~-~~~~~~lg~~~--vi~~~~~~~~~~~~~~~~~~~~~d~v  262 (373)
                      -.+++++|+|+| .+|..+++++...|+ +|++++++..+ .++..+++...  .......+   .+.+.+... .+|+|
T Consensus       175 l~gk~vvVIG~G~iVG~~~A~~L~~~gA-tVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~---~~~L~e~l~-~ADIV  249 (320)
T 1edz_A          175 LYGKKCIVINRSEIVGRPLAALLANDGA-TVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYS---EDLLKKCSL-DSDVV  249 (320)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSC-EEEEECSSEEEEEESCCCSSCCCCEEEEEEECC---HHHHHHHHH-HCSEE
T ss_pred             CCCCEEEEECCCcchHHHHHHHHHHCCC-EEEEEeCchHHHHhHHHHHhhhccccccccccc---HhHHHHHhc-cCCEE
Confidence            478999999998 679999999999998 79988776332 12222233210  00000000   022333332 48999


Q ss_pred             EEccCChHh-HHHHHHHhhcCCcEEEEEcCCC
Q 017336          263 VECTGNIDN-MISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       263 id~~g~~~~-~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      |.++|.+.. +..  +.++++ ..++.+|...
T Consensus       250 IsAtg~p~~vI~~--e~vk~G-avVIDVgi~r  278 (320)
T 1edz_A          250 ITGVPSENYKFPT--EYIKEG-AVCINFACTK  278 (320)
T ss_dssp             EECCCCTTCCBCT--TTSCTT-EEEEECSSSC
T ss_pred             EECCCCCcceeCH--HHcCCC-eEEEEcCCCc
Confidence            999998654 332  336786 7888887653

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=95.47  E-value=0.019  Score=49.97  Aligned_cols=95  Identities=15%  Similarity=0.046  Sum_probs=60.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCC--------------------ceeecCCCCC
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGV--------------------TDFVNTSEHD  244 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~--------------------~~vi~~~~~~  244 (373)
                      ..++.+||.+|+|. |..+..+++. |+ .|++++.+++..+.+++ .+.                    ..+ .....+
T Consensus        66 ~~~~~~vLD~GCG~-G~~~~~La~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~D  141 (252)
T 2gb4_A           66 GQSGLRVFFPLCGK-AIEMKWFADR-GH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSI-SLYCCS  141 (252)
T ss_dssp             TCCSCEEEETTCTT-CTHHHHHHHT-TC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSE-EEEESC
T ss_pred             CCCCCeEEEeCCCC-cHHHHHHHHC-CC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCce-EEEECc
Confidence            45788999999875 6667777765 88 89999999999888854 321                    111 000011


Q ss_pred             ccHHHHHHHHcC-CCccEEEEccC-----C---hHhHHHHHHHhhcCCcEEEEE
Q 017336          245 RPIQEVIAEMTN-GGVDRSVECTG-----N---IDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       245 ~~~~~~~~~~~~-~~~d~vid~~g-----~---~~~~~~~~~~l~~~~g~~v~~  289 (373)
                        +.+ + .... +.||+|++...     .   ...+..+.+.|+|+ |+++++
T Consensus       142 --~~~-l-~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpG-G~l~l~  190 (252)
T 2gb4_A          142 --IFD-L-PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKE-FQYLVA  190 (252)
T ss_dssp             --TTT-G-GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEE
T ss_pred             --ccc-C-CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence              100 1 0111 47999997432     1   13577888999997 998654

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=95.45  E-value=0.033  Score=48.73  Aligned_cols=100  Identities=15%  Similarity=0.127  Sum_probs=64.6

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee--ecCCCCCccHHHHHHHHcCCC
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF--VNTSEHDRPIQEVIAEMTNGG  258 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v--i~~~~~~~~~~~~~~~~~~~~  258 (373)
                      .....+.++.+||=+|+|. |..++.+++. |+ .|++++.+++..+.+++.-....  .+..+.+..    ......+.
T Consensus        38 l~~l~l~~g~~VLDlGcGt-G~~a~~La~~-g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~----~~~~~~~~  110 (261)
T 3iv6_A           38 IFLENIVPGSTVAVIGAST-RFLIEKALER-GA-SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAE----IPKELAGH  110 (261)
T ss_dssp             HHTTTCCTTCEEEEECTTC-HHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSC----CCGGGTTC
T ss_pred             HHhcCCCCcCEEEEEeCcc-hHHHHHHHhc-CC-EEEEEECCHHHHHHHHHHHHhccceeeeeecccc----cccccCCC
Confidence            4556788999999999875 7777788775 76 89999999999998876432211  111111100    00111247


Q ss_pred             ccEEEEccCC--------hHhHHHHHHHhhcCCcEEEEE
Q 017336          259 VDRSVECTGN--------IDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       259 ~d~vid~~g~--------~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      ||+|+....-        ...+....+.| |+ |++++.
T Consensus       111 fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PG-G~l~lS  147 (261)
T 3iv6_A          111 FDFVLNDRLINRFTTEEARRACLGMLSLV-GS-GTVRAS  147 (261)
T ss_dssp             CSEEEEESCGGGSCHHHHHHHHHHHHHHH-TT-SEEEEE
T ss_pred             ccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cC-cEEEEE
Confidence            9999875321        13566777788 97 988754

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=95.45  E-value=0.052  Score=49.38  Aligned_cols=87  Identities=18%  Similarity=0.157  Sum_probs=54.7

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh----hHHHHHH---hcCCcee-ecCCCCCccHHHHHHHHcCC-C
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS----KRFEEAK---KFGVTDF-VNTSEHDRPIQEVIAEMTNG-G  258 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~----~~~~~~~---~lg~~~v-i~~~~~~~~~~~~~~~~~~~-~  258 (373)
                      .++|||+|+ |.+|...+..+...|. +|++++++.    ++.+.++   ..++..+ .|..+     .+.+.+.... +
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d-----~~~l~~~~~~~~   83 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHR-PTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINE-----QEAMEKILKEHE   83 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTC-CEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTC-----HHHHHHHHHHTT
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCC-CEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCC-----HHHHHHHHhhCC
Confidence            368999998 9999999999988897 788888865    4555443   3455433 23322     1223332222 7


Q ss_pred             ccEEEEccCCh--HhHHHHHHHhhc
Q 017336          259 VDRSVECTGNI--DNMISAFECVHD  281 (373)
Q Consensus       259 ~d~vid~~g~~--~~~~~~~~~l~~  281 (373)
                      +|+||.+.+..  ......++.+..
T Consensus        84 ~d~Vi~~a~~~n~~~~~~l~~aa~~  108 (346)
T 3i6i_A           84 IDIVVSTVGGESILDQIALVKAMKA  108 (346)
T ss_dssp             CCEEEECCCGGGGGGHHHHHHHHHH
T ss_pred             CCEEEECCchhhHHHHHHHHHHHHH
Confidence            99999998853  223344455544

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=95.45  E-value=0.045  Score=49.20  Aligned_cols=95  Identities=15%  Similarity=0.098  Sum_probs=63.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHhc-CCc---eeecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336          190 SSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKF-GVT---DFVNTSEHDRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~~~~l-g~~---~vi~~~~~~~~~~~~~~~~~~~~~d~vid  264 (373)
                      .+||++|+|. |.++..+++.. +. +|++++.+++-.+.+++. +..   .+- ....+  ..+.+.....+.||+||.
T Consensus        91 ~rVLdIG~G~-G~la~~la~~~p~~-~v~~VEidp~vi~~Ar~~~~~~~~~rv~-v~~~D--a~~~l~~~~~~~fDvIi~  165 (317)
T 3gjy_A           91 LRITHLGGGA-CTMARYFADVYPQS-RNTVVELDAELARLSREWFDIPRAPRVK-IRVDD--ARMVAESFTPASRDVIIR  165 (317)
T ss_dssp             CEEEEESCGG-GHHHHHHHHHSTTC-EEEEEESCHHHHHHHHHHSCCCCTTTEE-EEESC--HHHHHHTCCTTCEEEEEE
T ss_pred             CEEEEEECCc-CHHHHHHHHHCCCc-EEEEEECCHHHHHHHHHhccccCCCceE-EEECc--HHHHHhhccCCCCCEEEE
Confidence            3899999875 66777888855 66 899999999999998773 321   110 01111  444444433458999886


Q ss_pred             ccC----------ChHhHHHHHHHhhcCCcEEEEEc
Q 017336          265 CTG----------NIDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       265 ~~g----------~~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      -..          ..+++..+.+.|+++ |.++...
T Consensus       166 D~~~~~~~~~~L~t~efl~~~~r~Lkpg-Gvlv~~~  200 (317)
T 3gjy_A          166 DVFAGAITPQNFTTVEFFEHCHRGLAPG-GLYVANC  200 (317)
T ss_dssp             CCSTTSCCCGGGSBHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEEe
Confidence            321          136788999999997 9887554

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=95.45  E-value=0.046  Score=49.91  Aligned_cols=90  Identities=20%  Similarity=0.251  Sum_probs=61.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .+++|.|+|.|.+|...++.++.+|+ +|++.+++.++ +..+++|+..+.     +  +.+.+.     ..|+|+.++.
T Consensus       167 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~~-----~--l~ell~-----~aDvV~l~~P  232 (347)
T 1mx3_A          167 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSD-GVERALGLQRVS-----T--LQDLLF-----HSDCVTLHCG  232 (347)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCT-THHHHHTCEECS-----S--HHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhHhhcCCeecC-----C--HHHHHh-----cCCEEEEcCC
Confidence            57899999999999999999999999 89999876544 234556664221     1  322222     3688888765


Q ss_pred             ChH----hH-HHHHHHhhcCCcEEEEEcCC
Q 017336          268 NID----NM-ISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       268 ~~~----~~-~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ..+    .+ ...+..|+++ ..++.++..
T Consensus       233 ~t~~t~~li~~~~l~~mk~g-ailIN~arg  261 (347)
T 1mx3_A          233 LNEHNHHLINDFTVKQMRQG-AFLVNTARG  261 (347)
T ss_dssp             CCTTCTTSBSHHHHTTSCTT-EEEEECSCT
T ss_pred             CCHHHHHHhHHHHHhcCCCC-CEEEECCCC
Confidence            421    22 4566777886 777777654

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=95.44  E-value=0.017  Score=49.25  Aligned_cols=95  Identities=18%  Similarity=0.095  Sum_probs=66.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc-eeecCCCCCccHHHHHHHHc-CCCccEEE
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMT-NGGVDRSV  263 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~-~vi~~~~~~~~~~~~~~~~~-~~~~d~vi  263 (373)
                      +.++.+||-+|+|. |..+..+++. ++ +|++++.++...+.+++.... .++..+-.+ .+     ... .+.||+|+
T Consensus        46 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~-~~-----~~~~~~~fD~v~  116 (226)
T 3m33_A           46 LTPQTRVLEAGCGH-GPDAARFGPQ-AA-RWAAYDFSPELLKLARANAPHADVYEWNGKG-EL-----PAGLGAPFGLIV  116 (226)
T ss_dssp             CCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHCTTSEEEECCSCS-SC-----CTTCCCCEEEEE
T ss_pred             CCCCCeEEEeCCCC-CHHHHHHHHc-CC-EEEEEECCHHHHHHHHHhCCCceEEEcchhh-cc-----CCcCCCCEEEEE
Confidence            36788999999875 6677777776 77 899999999998888775221 122111100 00     011 24799999


Q ss_pred             EccCChHhHHHHHHHhhcCCcEEEEEc
Q 017336          264 ECTGNIDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       264 d~~g~~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      ........+..+.+.|+|+ |+++..+
T Consensus       117 ~~~~~~~~l~~~~~~Lkpg-G~l~~~~  142 (226)
T 3m33_A          117 SRRGPTSVILRLPELAAPD-AHFLYVG  142 (226)
T ss_dssp             EESCCSGGGGGHHHHEEEE-EEEEEEE
T ss_pred             eCCCHHHHHHHHHHHcCCC-cEEEEeC
Confidence            8876667889999999997 9998443

>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}

Probab=95.44  E-value=0.053  Score=48.24  Aligned_cols=70  Identities=20%  Similarity=0.150  Sum_probs=50.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc-------CCceeecCCCCCccHHHHHHHHcCCCc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-------GVTDFVNTSEHDRPIQEVIAEMTNGGV  259 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l-------g~~~vi~~~~~~~~~~~~~~~~~~~~~  259 (373)
                      ...++|.|+|+|.+|...++.+. .|. .|++.++++++.+.+.+.       ++...-+..           +.  ...
T Consensus        10 ~~~~~V~vIG~G~MG~~iA~~la-aG~-~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~-----------~~--~~a   74 (293)
T 1zej_A           10 HHHMKVFVIGAGLMGRGIAIAIA-SKH-EVVLQDVSEKALEAAREQIPEELLSKIEFTTTLE-----------KV--KDC   74 (293)
T ss_dssp             --CCEEEEECCSHHHHHHHHHHH-TTS-EEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCT-----------TG--GGC
T ss_pred             cCCCeEEEEeeCHHHHHHHHHHH-cCC-EEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHH-----------HH--cCC
Confidence            34689999999999998888777 899 899999999998888765       222111111           10  268


Q ss_pred             cEEEEccCChHh
Q 017336          260 DRSVECTGNIDN  271 (373)
Q Consensus       260 d~vid~~g~~~~  271 (373)
                      |+||+++.....
T Consensus        75 DlVieavpe~~~   86 (293)
T 1zej_A           75 DIVMEAVFEDLN   86 (293)
T ss_dssp             SEEEECCCSCHH
T ss_pred             CEEEEcCcCCHH
Confidence            999999987543

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=95.43  E-value=0.054  Score=47.50  Aligned_cols=79  Identities=16%  Similarity=0.149  Sum_probs=49.3

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE-cCChhHHHHH----HhcCCce-ee--cCCCCC--ccHHHHHHHHc
Q 017336          187 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEA----KKFGVTD-FV--NTSEHD--RPIQEVIAEMT  255 (373)
Q Consensus       187 ~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~-~~~~~~~~~~----~~lg~~~-vi--~~~~~~--~~~~~~~~~~~  255 (373)
                      ..++++||+|+ |++|.++++.+...|+ +|+++ .++.++.+.+    ++.+... ++  |..+.+  ..+.+.+.+..
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGW-RVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            35688999987 8999999999999999 67665 6776655543    2334332 22  222211  01222232222


Q ss_pred             CCCccEEEEccC
Q 017336          256 NGGVDRSVECTG  267 (373)
Q Consensus       256 ~~~~d~vid~~g  267 (373)
                       +++|++|++.|
T Consensus       103 -g~id~li~nAg  113 (272)
T 4e3z_A          103 -GRLDGLVNNAG  113 (272)
T ss_dssp             -SCCCEEEECCC
T ss_pred             -CCCCEEEECCC
Confidence             37999999987

>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}

Probab=95.41  E-value=0.076  Score=49.72  Aligned_cols=135  Identities=16%  Similarity=0.117  Sum_probs=80.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc---------CCcEEEEEcCChhHHHH-HHhcCCceeecCCCCCccHHHHHHHHcCCCc
Q 017336          190 SSVAVFGLGAVGLAAAEGARIA---------GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGV  259 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~---------g~~~V~~~~~~~~~~~~-~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~  259 (373)
                      =+|.|+|+|.+|..-+...+..         +++-|.++++++++.+. ++++|...++.  +    +.+.+.+   ..+
T Consensus        27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~--d----~~~ll~~---~~v   97 (412)
T 4gqa_A           27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYG--D----WRELVND---PQV   97 (412)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEES--S----HHHHHHC---TTC
T ss_pred             ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEEC--C----HHHHhcC---CCC
Confidence            3789999999998766555543         34334455777776554 56788876542  1    4333322   379


Q ss_pred             cEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeecc-chhh--cccceEEEEeccCCCCCCCHHHHHHHHHcCC
Q 017336          260 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINV--LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQ  336 (373)
Q Consensus       260 d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~--~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~  336 (373)
                      |+|+.|+....+.+.+..+|..  |+=|++..+-....-... ....  .+++.+.-..  .++....++.+.+++++|.
T Consensus        98 D~V~I~tp~~~H~~~~~~al~a--GkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~--~~R~~p~~~~~k~~i~~G~  173 (412)
T 4gqa_A           98 DVVDITSPNHLHYTMAMAAIAA--GKHVYCEKPLAVNEQQAQEMAQAARRAGVKTMVAF--NNIKTPAALLAKQIIARGD  173 (412)
T ss_dssp             CEEEECSCGGGHHHHHHHHHHT--TCEEEEESCSCSSHHHHHHHHHHHHHHTCCEEEEC--GGGTSHHHHHHHHHHHHTT
T ss_pred             CEEEECCCcHHHHHHHHHHHHc--CCCeEeecCCcCCHHHHHHHHHHHHHhCCeeeecc--ceecCHHHHHHHHHHhcCC
Confidence            9999999988889999999998  566666544311100000 0111  1333332222  2333345778888888886


Q ss_pred             C
Q 017336          337 L  337 (373)
Q Consensus       337 l  337 (373)
                      |
T Consensus       174 i  174 (412)
T 4gqa_A          174 I  174 (412)
T ss_dssp             T
T ss_pred             c
Confidence            5

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=95.41  E-value=0.033  Score=48.58  Aligned_cols=78  Identities=14%  Similarity=0.199  Sum_probs=47.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCC-hhHHHHHHh----cCCce-e--ecCCCCCccHHHHHHHHcC--
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS-SKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMTN--  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~-~~~~~~~~~----lg~~~-v--i~~~~~~~~~~~~~~~~~~--  256 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++.++ ++..+.+++    .+... +  .|..+.+ .+.+.+.+...  
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~   83 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGY-SVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKE-DLHKIVEEAMSHF   83 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHH-HHHHHHHHHHHHH
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHh
Confidence            3578999987 8999999999989999 78777554 444444433    22221 2  2322211 12222222211  


Q ss_pred             CCccEEEEccC
Q 017336          257 GGVDRSVECTG  267 (373)
Q Consensus       257 ~~~d~vid~~g  267 (373)
                      +++|++|++.|
T Consensus        84 g~id~lv~~Ag   94 (264)
T 3i4f_A           84 GKIDFLINNAG   94 (264)
T ss_dssp             SCCCEEECCCC
T ss_pred             CCCCEEEECCc
Confidence            37999999998

>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}

Probab=95.40  E-value=0.13  Score=47.12  Aligned_cols=91  Identities=15%  Similarity=0.120  Sum_probs=60.1

Q ss_pred             CEEEEECCCHHHH-HHHHHHHHcCCcEEEEEcCChhHHH-HHHhcCCceeecCCCCCccHHHHHHHHcCC-CccEEEEcc
Q 017336          190 SSVAVFGLGAVGL-AAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECT  266 (373)
Q Consensus       190 ~~vlI~G~g~~G~-~ai~la~~~g~~~V~~~~~~~~~~~-~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~  266 (373)
                      -+|.|+|+|.++. ..+..++.-+++-+.++++++++.+ .++++|...++.  +    +.+    +... .+|+|+.|+
T Consensus        27 irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~--~----~~~----ll~~~~vD~V~I~t   96 (361)
T 3u3x_A           27 LRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIA--T----AEE----ILEDENIGLIVSAA   96 (361)
T ss_dssp             CEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEES--C----HHH----HHTCTTCCEEEECC
T ss_pred             cEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccC--C----HHH----HhcCCCCCEEEEeC
Confidence            4799999987664 3444445678844556677777755 456677443331  1    322    2223 799999999


Q ss_pred             CChHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          267 GNIDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       267 g~~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ....+.+.+..+|..  |+-|++..+
T Consensus        97 p~~~H~~~~~~al~a--GkhVl~EKP  120 (361)
T 3u3x_A           97 VSSERAELAIRAMQH--GKDVLVDKP  120 (361)
T ss_dssp             CHHHHHHHHHHHHHT--TCEEEEESC
T ss_pred             ChHHHHHHHHHHHHC--CCeEEEeCC
Confidence            987888899999997  566666443

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=95.39  E-value=0.038  Score=46.98  Aligned_cols=98  Identities=16%  Similarity=0.247  Sum_probs=65.3

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc-eeecCCCCCccHHHHHHHHcCCC
Q 017336          184 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTNGG  258 (373)
Q Consensus       184 ~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~-~vi~~~~~~~~~~~~~~~~~~~~  258 (373)
                      ..++++++||=+|+|..|..++.+++..+. +|++++.+++..+.+++    .+.. .++..+...      +.....+.
T Consensus        51 ~~~~~~~~vLDlG~G~~G~~~~~la~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~------~~~~~~~~  123 (230)
T 3evz_A           51 TFLRGGEVALEIGTGHTAMMALMAEKFFNC-KVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGI------IKGVVEGT  123 (230)
T ss_dssp             TTCCSSCEEEEECCTTTCHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCS------STTTCCSC
T ss_pred             hhcCCCCEEEEcCCCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchh------hhhcccCc
Confidence            346788999999998668888888887666 89999999988777754    3431 122221100      01112247


Q ss_pred             ccEEEEccCC-------------------------hHhHHHHHHHhhcCCcEEEEE
Q 017336          259 VDRSVECTGN-------------------------IDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       259 ~d~vid~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      ||+|+-...-                         ..++..+.+.|+++ |+++++
T Consensus       124 fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~  178 (230)
T 3evz_A          124 FDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPG-GKVALY  178 (230)
T ss_dssp             EEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEE-EEEEEE
T ss_pred             eeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCC-eEEEEE
Confidence            9999954210                         35677888889997 888775

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=95.39  E-value=0.046  Score=48.33  Aligned_cols=78  Identities=22%  Similarity=0.307  Sum_probs=48.4

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCcEEEEEcCChh---HHHHHHh-cCCcee--ecCCCCCccHHHH---HHHHc
Q 017336          188 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSK---RFEEAKK-FGVTDF--VNTSEHDRPIQEV---IAEMT  255 (373)
Q Consensus       188 ~~~~vlI~G~---g~~G~~ai~la~~~g~~~V~~~~~~~~---~~~~~~~-lg~~~v--i~~~~~~~~~~~~---~~~~~  255 (373)
                      .++++||+|+   |++|.++++.+...|+ +|++++++++   ..+.+.+ .+....  .|..+.+ .+.+.   +.+..
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~   97 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDE-DIKNLKKFLEENW   97 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHH-HHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            4688999985   5999999998888999 8999888764   2233322 332122  2322211 12222   22222


Q ss_pred             CCCccEEEEccCC
Q 017336          256 NGGVDRSVECTGN  268 (373)
Q Consensus       256 ~~~~d~vid~~g~  268 (373)
                       +++|++|++.|.
T Consensus        98 -g~iD~lv~~Ag~  109 (285)
T 2p91_A           98 -GSLDIIVHSIAY  109 (285)
T ss_dssp             -SCCCEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             379999999873

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=95.36  E-value=0.034  Score=49.17  Aligned_cols=71  Identities=15%  Similarity=0.082  Sum_probs=49.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  270 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  270 (373)
                      +|.|+|+|.+|...+..+.. |. .|+++++++++.+.+.+.|.... +   ..        +.. ...|+||.|+..+.
T Consensus         3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~g~~~~-~---~~--------~~~-~~~D~vi~~v~~~~   67 (289)
T 2cvz_A            3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEEFGSEA-V---PL--------ERV-AEARVIFTCLPTTR   67 (289)
T ss_dssp             CEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHHHCCEE-C---CG--------GGG-GGCSEEEECCSSHH
T ss_pred             eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHCCCccc-C---HH--------HHH-hCCCEEEEeCCChH
Confidence            58899999999988877777 98 79999999888887776554321 1   10        111 14788888887754


Q ss_pred             hHHHHH
Q 017336          271 NMISAF  276 (373)
Q Consensus       271 ~~~~~~  276 (373)
                      .....+
T Consensus        68 ~~~~v~   73 (289)
T 2cvz_A           68 EVYEVA   73 (289)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            444443

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=95.35  E-value=0.12  Score=49.65  Aligned_cols=83  Identities=22%  Similarity=0.277  Sum_probs=52.7

Q ss_pred             CCCC--CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh-------HHHHHHhcCCcee-ecCCCCCc-cHHHHHHH
Q 017336          186 PERG--SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-------RFEEAKKFGVTDF-VNTSEHDR-PIQEVIAE  253 (373)
Q Consensus       186 ~~~~--~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~-------~~~~~~~lg~~~v-i~~~~~~~-~~~~~~~~  253 (373)
                      ++++  +++||+|+ |++|...++.+...|+++|+.++++..       -.+.+++.|.... +..+-.+. .+.+.+.+
T Consensus       234 ~~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~  313 (496)
T 3mje_A          234 KRPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAE  313 (496)
T ss_dssp             CCCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             CCCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            3455  89999987 999999999888899878888877532       2233455676432 22221221 23333333


Q ss_pred             HcC-CCccEEEEccCC
Q 017336          254 MTN-GGVDRSVECTGN  268 (373)
Q Consensus       254 ~~~-~~~d~vid~~g~  268 (373)
                      ... +++|+||++.|.
T Consensus       314 i~~~g~ld~vVh~AGv  329 (496)
T 3mje_A          314 LPEDAPLTAVFHSAGV  329 (496)
T ss_dssp             CCTTSCEEEEEECCCC
T ss_pred             HHHhCCCeEEEECCcc
Confidence            322 379999999874

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=95.35  E-value=0.082  Score=46.02  Aligned_cols=78  Identities=21%  Similarity=0.346  Sum_probs=48.5

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCcEEEEEcCChh---HHHHHHh-cCCceee--cCCCCCccHHHHH---HHHc
Q 017336          188 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSK---RFEEAKK-FGVTDFV--NTSEHDRPIQEVI---AEMT  255 (373)
Q Consensus       188 ~~~~vlI~G~---g~~G~~ai~la~~~g~~~V~~~~~~~~---~~~~~~~-lg~~~vi--~~~~~~~~~~~~~---~~~~  255 (373)
                      .++++||+|+   |.+|.+.++.+...|+ +|++++++++   ..+.+.+ .+....+  |..+.+ .+.+.+   .+..
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~   84 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDE-ELDALFAGVKEAF   84 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHH-HHHHHHHHHHHHc
Confidence            4688999985   6999999988888899 8999888765   2333322 3422222  332211 122222   2222


Q ss_pred             CCCccEEEEccCC
Q 017336          256 NGGVDRSVECTGN  268 (373)
Q Consensus       256 ~~~~d~vid~~g~  268 (373)
                       +++|++|++.|.
T Consensus        85 -g~iD~lv~~Ag~   96 (261)
T 2wyu_A           85 -GGLDYLVHAIAF   96 (261)
T ss_dssp             -SSEEEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             379999999873

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=95.35  E-value=0.064  Score=48.59  Aligned_cols=134  Identities=13%  Similarity=0.029  Sum_probs=78.3

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc-CCcEEE-EEcCChhHHHH-HHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          190 SSVAVFGLGAVGLAAAEGARIA-GASRII-GVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~-g~~~V~-~~~~~~~~~~~-~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      -+|.|+|+|.+|...+..++.. ++ .++ +++++.++.+. ++++|...++.    +  +.+.+.   ...+|+|+.|+
T Consensus         6 ~~igiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~~~~~----~--~~~ll~---~~~~D~V~i~t   75 (330)
T 3e9m_A            6 IRYGIMSTAQIVPRFVAGLRESAQA-EVRGIASRRLENAQKMAKELAIPVAYG----S--YEELCK---DETIDIIYIPT   75 (330)
T ss_dssp             EEEEECSCCTTHHHHHHHHHHSSSE-EEEEEBCSSSHHHHHHHHHTTCCCCBS----S--HHHHHH---CTTCSEEEECC
T ss_pred             EEEEEECchHHHHHHHHHHHhCCCc-EEEEEEeCCHHHHHHHHHHcCCCceeC----C--HHHHhc---CCCCCEEEEcC
Confidence            4789999999998877777764 56 555 55777666544 45677643221    1  333332   13799999999


Q ss_pred             CChHhHHHHHHHhhcCCcEEEEEcCCCCCceeecc-chhhc--ccceEEEEeccCCCCCCCHHHHHHHHHcCCC
Q 017336          267 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  337 (373)
Q Consensus       267 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~--~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l  337 (373)
                      ....+.+.+..++..  |+-+++..+.....-... .....  +++.+.-..  ..+....++.+.+++++|.+
T Consensus        76 p~~~h~~~~~~al~~--gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~k~~i~~g~i  145 (330)
T 3e9m_A           76 YNQGHYSAAKLALSQ--GKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQ--KSVFLPITQKVKATIQEGGL  145 (330)
T ss_dssp             CGGGHHHHHHHHHHT--TCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECC--SGGGCHHHHHHHHHHHTTTT
T ss_pred             CCHHHHHHHHHHHHC--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEE--hhhhCHHHHHHHHHHhCCCC
Confidence            988888888999887  444555443211100000 01111  333332221  22333457788888888865

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=95.35  E-value=0.037  Score=50.01  Aligned_cols=99  Identities=18%  Similarity=0.198  Sum_probs=61.4

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc-----C--Ccee--ecCCCCCccHHHHHHHHcC
Q 017336          187 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-----G--VTDF--VNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       187 ~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l-----g--~~~v--i~~~~~~~~~~~~~~~~~~  256 (373)
                      -++++|||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+.     +  +..+  .|..+.+     .+.+...
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-----~~~~~~~   82 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQG-----AYDEVIK   82 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTT-----TTTTTTT
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChH-----HHHHHHc
Confidence            45789999998 9999999998888898 899998987765544321     2  2222  2322221     1222222


Q ss_pred             CCccEEEEccCChH--------------hHHHHHHHhh--cCCcEEEEEcCC
Q 017336          257 GGVDRSVECTGNID--------------NMISAFECVH--DGWGVAVLVGVP  292 (373)
Q Consensus       257 ~~~d~vid~~g~~~--------------~~~~~~~~l~--~~~g~~v~~g~~  292 (373)
                       ++|+||++.+...              .....++.+.  .+.++++.++..
T Consensus        83 -~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~  133 (342)
T 1y1p_A           83 -GAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSST  133 (342)
T ss_dssp             -TCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCG
T ss_pred             -CCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccH
Confidence             6899999987421              1223344443  222688888764

>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5

Probab=95.34  E-value=0.1  Score=47.51  Aligned_cols=135  Identities=16%  Similarity=0.114  Sum_probs=79.8

Q ss_pred             CCEEEEECCC-HHHHHHHHHHHHc--CCcEEEEEcCChhHHHH-HHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336          189 GSSVAVFGLG-AVGLAAAEGARIA--GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       189 ~~~vlI~G~g-~~G~~ai~la~~~--g~~~V~~~~~~~~~~~~-~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid  264 (373)
                      .-+|.|+|+| .+|...+..++..  +++-+.++++++++.+. ++++|...++.  +    +.+.+.+   ..+|+|+.
T Consensus        18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~--~----~~~ll~~---~~vD~V~i   88 (340)
T 1zh8_A           18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD--S----YEELLES---GLVDAVDL   88 (340)
T ss_dssp             CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES--C----HHHHHHS---SCCSEEEE
T ss_pred             ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccC--C----HHHHhcC---CCCCEEEE
Confidence            3478899999 7898777766665  46344566777776654 45677644432  1    3333321   37999999


Q ss_pred             ccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeecc--chhh--cccceEEEEeccCCCCCCCHHHHHHHHHcCCC
Q 017336          265 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK--PINV--LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  337 (373)
Q Consensus       265 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~--~~~~--~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l  337 (373)
                      |+....+.+.+..+|..  |+-|++..+-.. +..-.  ....  .++..+.-..  ..+....++.+.+++++|.+
T Consensus        89 ~tp~~~H~~~~~~al~a--GkhVl~EKPla~-~~~ea~~l~~~a~~~g~~~~v~~--~~R~~p~~~~~k~~i~~g~i  160 (340)
T 1zh8_A           89 TLPVELNLPFIEKALRK--GVHVICEKPIST-DVETGKKVVELSEKSEKTVYIAE--NFRHVPAFWKAKELVESGAI  160 (340)
T ss_dssp             CCCGGGHHHHHHHHHHT--TCEEEEESSSSS-SHHHHHHHHHHHHHCSSCEEEEC--GGGGCHHHHHHHHHHHTTTT
T ss_pred             eCCchHHHHHHHHHHHC--CCcEEEeCCCCC-CHHHHHHHHHHHHHcCCeEEEEe--cccCCHHHHHHHHHHhcCCC
Confidence            99987788899999987  555666543211 11100  0111  1333332222  23333457788888888865

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.32  E-value=0.023  Score=49.75  Aligned_cols=92  Identities=14%  Similarity=0.089  Sum_probs=62.4

Q ss_pred             cccchhhhhhhhhhccCCCCCCEEEEECCC-HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccH
Q 017336          169 LSCGVSTGLGATLNVAKPERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPI  247 (373)
Q Consensus       169 ~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g-~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~  247 (373)
                      +||+.......+.+ .+ -.|++++|+|.| .+|..+++++...|+ +|+++.+..                   .+  +
T Consensus       132 ~PcTp~gv~~lL~~-~~-l~Gk~vvVvG~s~iVG~plA~lL~~~gA-tVtv~~~~t-------------------~~--L  187 (276)
T 3ngx_A          132 VPATPRAVIDIMDY-YG-YHENTVTIVNRSPVVGRPLSMMLLNRNY-TVSVCHSKT-------------------KD--I  187 (276)
T ss_dssp             CCHHHHHHHHHHHH-HT-CCSCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC-------------------SC--H
T ss_pred             CCCcHHHHHHHHHH-hC-cCCCEEEEEcCChHHHHHHHHHHHHCCC-eEEEEeCCc-------------------cc--H
Confidence            34444444443333 33 689999999985 699999999999999 788885421                   11  3


Q ss_pred             HHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          248 QEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       248 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      .+.++     .+|+||.++|.+.++..  +.++++ ..++.+|..
T Consensus       188 ~~~~~-----~ADIVI~Avg~p~~I~~--~~vk~G-avVIDvgi~  224 (276)
T 3ngx_A          188 GSMTR-----SSKIVVVAVGRPGFLNR--EMVTPG-SVVIDVGIN  224 (276)
T ss_dssp             HHHHH-----HSSEEEECSSCTTCBCG--GGCCTT-CEEEECCCE
T ss_pred             HHhhc-----cCCEEEECCCCCccccH--hhccCC-cEEEEeccC
Confidence            33333     37999999998765433  457886 888877764

>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}

Probab=95.32  E-value=0.16  Score=46.66  Aligned_cols=132  Identities=18%  Similarity=0.199  Sum_probs=75.4

Q ss_pred             CEEEEECCCHHHHH-HHHHHHHc-CCcEEE-EEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          190 SSVAVFGLGAVGLA-AAEGARIA-GASRII-GVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       190 ~~vlI~G~g~~G~~-ai~la~~~-g~~~V~-~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      -+|.|+|+|.+|.. .+..++.. ++ +++ +++++.++.+  ++++...++.  +    +.+.+.   ...+|+|+.|+
T Consensus         8 ~rvgiiG~G~~g~~~~~~~l~~~~~~-~l~av~d~~~~~~~--~~~~~~~~~~--~----~~~ll~---~~~~D~V~i~t   75 (364)
T 3e82_A            8 INIALIGYGFVGKTFHAPLIRSVPGL-NLAFVASRDEEKVK--RDLPDVTVIA--S----PEAAVQ---HPDVDLVVIAS   75 (364)
T ss_dssp             EEEEEECCSHHHHHTHHHHHHTSTTE-EEEEEECSCHHHHH--HHCTTSEEES--C----HHHHHT---CTTCSEEEECS
T ss_pred             ceEEEECCCHHHHHHHHHHHhhCCCe-EEEEEEcCCHHHHH--hhCCCCcEEC--C----HHHHhc---CCCCCEEEEeC
Confidence            36899999999985 66666655 67 554 5566666543  3454333321  1    322221   13799999999


Q ss_pred             CChHhHHHHHHHhhcCCcEEEEEcCCCCCceeecc-chhhc--ccceEEEEeccCCCCCCCHHHHHHHHHcCCC
Q 017336          267 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  337 (373)
Q Consensus       267 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~--~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l  337 (373)
                      ....+.+.+..+|..  |+-+++..+-....-... .....  ++..+.-..  ..+....++.+.+++.+|.+
T Consensus        76 p~~~H~~~~~~al~a--Gk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~~~~i~~g~i  145 (364)
T 3e82_A           76 PNATHAPLARLALNA--GKHVVVDKPFTLDMQEARELIALAEEKQRLLSVFH--NRRWDSDYLGIRQVIEQGTL  145 (364)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECC--CCTTCHHHHHHHHHHHHTTT
T ss_pred             ChHHHHHHHHHHHHC--CCcEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEe--ecccCHHHHHHHHHHHcCCC
Confidence            987888899999987  566666543211100000 01111  333332211  22333357788888888865

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=95.32  E-value=0.046  Score=45.66  Aligned_cols=97  Identities=13%  Similarity=0.090  Sum_probs=64.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc----eeecCCCCCccHHHHHHHHcCCCccE
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT----DFVNTSEHDRPIQEVIAEMTNGGVDR  261 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~----~vi~~~~~~~~~~~~~~~~~~~~~d~  261 (373)
                      +.++.+||-+|+|. |..+..+++. |..+|++++.++...+.+++....    .++..+..+  +     ....+.+|+
T Consensus        40 ~~~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~--~-----~~~~~~fD~  110 (215)
T 2pxx_A           40 LRPEDRILVLGCGN-SALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRK--L-----DFPSASFDV  110 (215)
T ss_dssp             CCTTCCEEEETCTT-CSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTS--C-----CSCSSCEEE
T ss_pred             cCCCCeEEEECCCC-cHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhc--C-----CCCCCcccE
Confidence            47788999999876 7777777776 444899999999998888764321    122111111  0     112237999


Q ss_pred             EEEccC---------------------ChHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          262 SVECTG---------------------NIDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       262 vid~~g---------------------~~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      |+....                     ....+..+.+.|+++ |++++....
T Consensus       111 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~~  161 (215)
T 2pxx_A          111 VLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPG-GRFISMTSA  161 (215)
T ss_dssp             EEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEE-EEEEEEESC
T ss_pred             EEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCC-CEEEEEeCC
Confidence            996321                     135678889999997 999887553

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=95.29  E-value=0.12  Score=49.58  Aligned_cols=84  Identities=20%  Similarity=0.255  Sum_probs=53.3

Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH-------HHHHHhcCCce-eecCCCCCc-cHHHHHHHH
Q 017336          185 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-------FEEAKKFGVTD-FVNTSEHDR-PIQEVIAEM  254 (373)
Q Consensus       185 ~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~-------~~~~~~lg~~~-vi~~~~~~~-~~~~~~~~~  254 (373)
                      .+++++++||+|+ |++|...+..+...|+++|+.++++...       .+.+++.|... ++..+-.+. .+.+.+.+.
T Consensus       222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             CcCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence            3578899999987 9999999988888898668888887531       22344556543 222221121 133333333


Q ss_pred             cC-CCccEEEEccCC
Q 017336          255 TN-GGVDRSVECTGN  268 (373)
Q Consensus       255 ~~-~~~d~vid~~g~  268 (373)
                      .. +.+|.||++.|.
T Consensus       302 ~~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          302 GDDVPLSAVFHAAAT  316 (486)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             HhcCCCcEEEECCcc
Confidence            11 268999999883

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=95.29  E-value=0.12  Score=45.16  Aligned_cols=78  Identities=9%  Similarity=0.087  Sum_probs=53.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      .+|.|+|+|.+|...++.+...|.+.|.++++++++.+.+.+ +|+...-+..           +.. ...|+||.|+..
T Consensus        11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----------~~~-~~~Dvvi~av~~   78 (266)
T 3d1l_A           11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLA-----------EVN-PYAKLYIVSLKD   78 (266)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGG-----------GSC-SCCSEEEECCCH
T ss_pred             CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHH-----------HHh-cCCCEEEEecCH
Confidence            469999999999998888888898448889999888777655 4754221111           111 258999999987


Q ss_pred             hHhHHHHHHHhh
Q 017336          269 IDNMISAFECVH  280 (373)
Q Consensus       269 ~~~~~~~~~~l~  280 (373)
                      .. ....++.+.
T Consensus        79 ~~-~~~v~~~l~   89 (266)
T 3d1l_A           79 SA-FAELLQGIV   89 (266)
T ss_dssp             HH-HHHHHHHHH
T ss_pred             HH-HHHHHHHHH
Confidence            53 344444443

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=95.28  E-value=0.097  Score=44.34  Aligned_cols=101  Identities=18%  Similarity=0.168  Sum_probs=64.9

Q ss_pred             hccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHh----c-CCceeecCCCCCccHHHHHHHHc
Q 017336          182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----F-GVTDFVNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~----l-g~~~vi~~~~~~~~~~~~~~~~~  255 (373)
                      ....+.++++||-+|+|. |..+..+++..|. .+|++++.+++..+.+++    . ++. ++..+..+...   . ...
T Consensus        67 ~~~~~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~-~~~~d~~~~~~---~-~~~  140 (227)
T 1g8a_A           67 KNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIV-PILGDATKPEE---Y-RAL  140 (227)
T ss_dssp             CCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEE-EEECCTTCGGG---G-TTT
T ss_pred             HhcCCCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCE-EEEccCCCcch---h-hcc
Confidence            344578899999999876 8888888888752 389999999976555433    2 111 22111111000   0 011


Q ss_pred             CCCccEEEEccCCh----HhHHHHHHHhhcCCcEEEEE
Q 017336          256 NGGVDRSVECTGNI----DNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       256 ~~~~d~vid~~g~~----~~~~~~~~~l~~~~g~~v~~  289 (373)
                      .+.+|+|+.....+    ..+..+.+.|+++ |++++.
T Consensus       141 ~~~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~  177 (227)
T 1g8a_A          141 VPKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA  177 (227)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cCCceEEEECCCCHhHHHHHHHHHHHhcCCC-CEEEEE
Confidence            23799999765543    2377899999997 998876

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=95.28  E-value=0.07  Score=46.84  Aligned_cols=78  Identities=13%  Similarity=0.189  Sum_probs=48.7

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCcEEEEEcCChh---HHHHHHh-cCCcee--ecCCCCCccHHHHH---HHHc
Q 017336          188 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSK---RFEEAKK-FGVTDF--VNTSEHDRPIQEVI---AEMT  255 (373)
Q Consensus       188 ~~~~vlI~G~---g~~G~~ai~la~~~g~~~V~~~~~~~~---~~~~~~~-lg~~~v--i~~~~~~~~~~~~~---~~~~  255 (373)
                      .++++||+|+   |++|.++++.+...|+ +|++++++++   ..+.+.+ .+...+  .|..+.+ .+.+.+   .+..
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~   82 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEE-HFKSLYNSVKKDL   82 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHH-HHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            4689999985   6999999999988999 8999888764   3333322 342122  2332211 122222   2222


Q ss_pred             CCCccEEEEccCC
Q 017336          256 NGGVDRSVECTGN  268 (373)
Q Consensus       256 ~~~~d~vid~~g~  268 (373)
                       +++|++|++.|.
T Consensus        83 -g~id~lv~nAg~   94 (275)
T 2pd4_A           83 -GSLDFIVHSVAF   94 (275)
T ss_dssp             -SCEEEEEECCCC
T ss_pred             -CCCCEEEECCcc
Confidence             379999999873

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=95.27  E-value=0.042  Score=45.63  Aligned_cols=62  Identities=29%  Similarity=0.438  Sum_probs=42.1

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          191 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       191 ~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      ++||+|+ |.+|...++.+. .|+ +|++++++.+          ....|..+.+ .+.+.+.+.  +++|++|++.|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~-~V~~~~r~~~----------~~~~D~~~~~-~~~~~~~~~--~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKA-EVITAGRHSG----------DVTVDITNID-SIKKMYEQV--GKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTS-EEEEEESSSS----------SEECCTTCHH-HHHHHHHHH--CCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCC-eEEEEecCcc----------ceeeecCCHH-HHHHHHHHh--CCCCEEEECCC
Confidence            7999987 899999998888 898 8999888754          1122332211 132333333  47899999987

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=95.26  E-value=0.047  Score=47.96  Aligned_cols=96  Identities=13%  Similarity=0.214  Sum_probs=59.3

Q ss_pred             EEEEECC-CHHHHHHHHHHHHc--CCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          191 SVAVFGL-GAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       191 ~vlI~G~-g~~G~~ai~la~~~--g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      +|||+|+ |.+|...++.+...  |+ +|+++++++++.+.+...++..+ .|..+     .+.+.+... ++|+||++.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~d-----~~~~~~~~~-~~d~vi~~a   73 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPAKAQALAAQGITVRQADYGD-----EAALTSALQ-GVEKLLLIS   73 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTCHHHHHTTCEEEECCTTC-----HHHHHHHTT-TCSEEEECC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChHhhhhhhcCCCeEEEcCCCC-----HHHHHHHHh-CCCEEEEeC
Confidence            4899998 99999999888877  87 78888888776555555555433 23222     123444443 689999998


Q ss_pred             CCh-----HhHHHHHHHhhc-CCcEEEEEcCCC
Q 017336          267 GNI-----DNMISAFECVHD-GWGVAVLVGVPS  293 (373)
Q Consensus       267 g~~-----~~~~~~~~~l~~-~~g~~v~~g~~~  293 (373)
                      +..     ......++.+.. +.++++.++...
T Consensus        74 ~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~  106 (286)
T 2zcu_A           74 SSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLH  106 (286)
T ss_dssp             --------CHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred             CCCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            742     122333444433 225788877643

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=95.25  E-value=0.0092  Score=52.44  Aligned_cols=75  Identities=25%  Similarity=0.300  Sum_probs=47.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCC--ccHHHHHHHHcCCCccEEEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD--RPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~--~~~~~~~~~~~~~~~d~vid  264 (373)
                      .++++||+|+ |++|.++++.+...|+ +|++++++.++.+....+    ..|..+..  ..+.+.+.+.. +++|++++
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~----~~Dv~~~~~~~~~~~~~~~~~-g~iD~lvn  100 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAGIAADLHL----PGDLREAAYADGLPGAVAAGL-GRLDIVVN  100 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTTSCCSEEC----CCCTTSHHHHHHHHHHHHHHH-SCCCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHhhhcc----CcCCCCHHHHHHHHHHHHHhc-CCCCEEEE
Confidence            4689999987 8999999999999999 899998876543221111    11111111  01222222222 37999999


Q ss_pred             ccCC
Q 017336          265 CTGN  268 (373)
Q Consensus       265 ~~g~  268 (373)
                      +.|.
T Consensus       101 nAg~  104 (266)
T 3uxy_A          101 NAGV  104 (266)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9884

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=95.24  E-value=0.056  Score=47.31  Aligned_cols=79  Identities=15%  Similarity=0.276  Sum_probs=50.0

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCcEEEEEcCChhH--HHHHHhcCCce-e--ecCCCCC--ccHHHHHHHHcC-
Q 017336          188 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSKR--FEEAKKFGVTD-F--VNTSEHD--RPIQEVIAEMTN-  256 (373)
Q Consensus       188 ~~~~vlI~G~---g~~G~~ai~la~~~g~~~V~~~~~~~~~--~~~~~~lg~~~-v--i~~~~~~--~~~~~~~~~~~~-  256 (373)
                      .++++||+|+   |++|.+.++.+...|+ +|+++++++++  .+..++++... .  .|..+.+  ..+.+.+.+..+ 
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   84 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4688999984   7999999999999999 89988887755  23334454321 1  2332211  112222333332 


Q ss_pred             -CCccEEEEccC
Q 017336          257 -GGVDRSVECTG  267 (373)
Q Consensus       257 -~~~d~vid~~g  267 (373)
                       +++|++|++.|
T Consensus        85 ~~~iD~lv~nAg   96 (269)
T 2h7i_A           85 GNKLDGVVHSIG   96 (269)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCceEEEECCc
Confidence             17999999987

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=95.24  E-value=0.037  Score=47.43  Aligned_cols=99  Identities=19%  Similarity=0.225  Sum_probs=58.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCc-EEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~-~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      +++|||+|+ |.+|...++.+...|+. +|+++++++++.+....-++..+ .|..+.     +.+.+... ++|+||++
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~-----~~~~~~~~-~~d~vi~~   91 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKL-----DDYASAFQ-GHDVGFCC   91 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGG-----GGGGGGGS-SCSEEEEC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCH-----HHHHHHhc-CCCEEEEC
Confidence            578999997 99999999988888862 68888787654322211122211 222111     11223332 69999999


Q ss_pred             cCChH--------------hHHHHHHHhhc-CCcEEEEEcCCC
Q 017336          266 TGNID--------------NMISAFECVHD-GWGVAVLVGVPS  293 (373)
Q Consensus       266 ~g~~~--------------~~~~~~~~l~~-~~g~~v~~g~~~  293 (373)
                      .|...              .....++.+.. +.++++.++...
T Consensus        92 ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~  134 (242)
T 2bka_A           92 LGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKG  134 (242)
T ss_dssp             CCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCc
Confidence            98521              11233334433 226898887754

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.24  E-value=0.02  Score=51.17  Aligned_cols=71  Identities=14%  Similarity=0.079  Sum_probs=52.3

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      .+|.|+|.|.+|...++.+...|. .|++.++++++.+.+.+.|+...   .  +  .    .+...  .|+||.|+..+
T Consensus        16 ~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~---~--~--~----~~~~~--aDvvi~~vp~~   81 (296)
T 3qha_A           16 LKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRIEAMTPLAEAGATLA---D--S--V----ADVAA--ADLIHITVLDD   81 (296)
T ss_dssp             CCEEEECCSTTHHHHHHHHTTSTT-CEEEECSSTTTSHHHHHTTCEEC---S--S--H----HHHTT--SSEEEECCSSH
T ss_pred             CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCEEc---C--C--H----HHHHh--CCEEEEECCCh
Confidence            579999999999998888888898 79999999999888888776421   1  1  2    22222  68888888765


Q ss_pred             HhHHH
Q 017336          270 DNMIS  274 (373)
Q Consensus       270 ~~~~~  274 (373)
                      ..+..
T Consensus        82 ~~~~~   86 (296)
T 3qha_A           82 AQVRE   86 (296)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            44443

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.22  E-value=0.048  Score=49.36  Aligned_cols=77  Identities=18%  Similarity=0.225  Sum_probs=47.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHH----HHHHhc-CCc-eeecCCCCCccHHHHHHHHcC-CCc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF----EEAKKF-GVT-DFVNTSEHDRPIQEVIAEMTN-GGV  259 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~----~~~~~l-g~~-~vi~~~~~~~~~~~~~~~~~~-~~~  259 (373)
                      .+++|||+|+ |.+|...++.+...|+ +|++++++.++.    +.+.+. +.. .++..+-.+.   +.+.+... +++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~~~~~   79 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDE---RALARIFDAHPI   79 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCH---HHHHHHHHHSCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCH---HHHHHHHhccCC
Confidence            4578999997 9999999999999999 899988764332    222221 221 1222111121   12222222 379


Q ss_pred             cEEEEccCC
Q 017336          260 DRSVECTGN  268 (373)
Q Consensus       260 d~vid~~g~  268 (373)
                      |+||++.+.
T Consensus        80 d~vih~A~~   88 (341)
T 3enk_A           80 TAAIHFAAL   88 (341)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECccc
Confidence            999999874

>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}

Probab=95.22  E-value=0.069  Score=50.64  Aligned_cols=102  Identities=20%  Similarity=0.236  Sum_probs=65.6

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcCCC
Q 017336          184 AKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGG  258 (373)
Q Consensus       184 ~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~~~  258 (373)
                      ..++++++||=+|+|+ |..++++|..++ ...|++++.++++.+.+++    +|...+..... +  ..+ +.....+.
T Consensus       101 L~~~~g~~VLDlcaGp-Ggkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~-D--a~~-l~~~~~~~  175 (456)
T 3m4x_A          101 AAAKPGEKVLDLCAAP-GGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNH-A--PAE-LVPHFSGF  175 (456)
T ss_dssp             HCCCTTCEEEESSCTT-CHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECC-C--HHH-HHHHHTTC
T ss_pred             cCCCCCCEEEEECCCc-CHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeC-C--HHH-hhhhcccc
Confidence            4567889988877654 445566666543 3489999999998887754    67654322222 2  222 22223457


Q ss_pred             ccEEEE---ccCCh-------------------------HhHHHHHHHhhcCCcEEEEEcC
Q 017336          259 VDRSVE---CTGNI-------------------------DNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       259 ~d~vid---~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ||+|+-   |+|..                         .++..+++.|+++ |+++..-.
T Consensus       176 FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTC  235 (456)
T 3m4x_A          176 FDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNK-GQLIYSTC  235 (456)
T ss_dssp             EEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEE-EEEEEEES
T ss_pred             CCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            999876   44432                         4577889999997 99886543

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=95.22  E-value=0.09  Score=48.72  Aligned_cols=83  Identities=22%  Similarity=0.217  Sum_probs=51.6

Q ss_pred             cCC-CCCCEEEEECC-CHHHHHHHHHHHH-cCCcEEEEEcCChhH----------------HHHHHhcCCcee-e--cCC
Q 017336          184 AKP-ERGSSVAVFGL-GAVGLAAAEGARI-AGASRIIGVDRSSKR----------------FEEAKKFGVTDF-V--NTS  241 (373)
Q Consensus       184 ~~~-~~~~~vlI~G~-g~~G~~ai~la~~-~g~~~V~~~~~~~~~----------------~~~~~~lg~~~v-i--~~~  241 (373)
                      ..+ ..++++||+|+ +++|++++..+.. .|+ +|++++++.+.                .+.+++.|.... +  |..
T Consensus        41 ~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA-~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvt  119 (405)
T 3zu3_A           41 GPIANGPKRVLVIGASTGYGLAARITAAFGCGA-DTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAF  119 (405)
T ss_dssp             CCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             CCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCC-EEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCC
Confidence            444 56788899987 7999998887777 899 78887664321                224455665432 2  222


Q ss_pred             CCC--ccHHHHHHHHcCCCccEEEEccCC
Q 017336          242 EHD--RPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       242 ~~~--~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      +.+  ..+.+.+.+.. |++|+++++.|.
T Consensus       120 d~~~v~~~v~~i~~~~-G~IDiLVNNAG~  147 (405)
T 3zu3_A          120 SDEIKQLTIDAIKQDL-GQVDQVIYSLAS  147 (405)
T ss_dssp             SHHHHHHHHHHHHHHT-SCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHc-CCCCEEEEcCcc
Confidence            211  11333333333 479999999875

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=95.21  E-value=0.077  Score=47.06  Aligned_cols=73  Identities=23%  Similarity=0.238  Sum_probs=49.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC-CcEEEEEcCChhHH--HHHHhcCCcee-ecCCCCCccHHHHHHHHcCCCccEEE
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAG-ASRIIGVDRSSKRF--EEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSV  263 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g-~~~V~~~~~~~~~~--~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vi  263 (373)
                      .++|||+|+ |.+|...++.+...| . +|++++++.++.  +.+...++..+ .|..+     .+.+.+... ++|+||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d-----~~~l~~~~~-~~d~vi   77 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTF-KVRVVTRNPRKKAAKELRLQGAEVVQGDQDD-----QVIMELALN-GAYATF   77 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSS-EEEEEESCTTSHHHHHHHHTTCEEEECCTTC-----HHHHHHHHT-TCSEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCc-eEEEEEcCCCCHHHHHHHHCCCEEEEecCCC-----HHHHHHHHh-cCCEEE
Confidence            478999998 999999998888878 7 899998876553  33344465433 23222     123444433 699999


Q ss_pred             EccCC
Q 017336          264 ECTGN  268 (373)
Q Consensus       264 d~~g~  268 (373)
                      .+.+.
T Consensus        78 ~~a~~   82 (299)
T 2wm3_A           78 IVTNY   82 (299)
T ss_dssp             ECCCH
T ss_pred             EeCCC
Confidence            99873

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=95.20  E-value=0.042  Score=50.46  Aligned_cols=74  Identities=15%  Similarity=0.205  Sum_probs=48.4

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHh-cCCcee-ecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKK-FGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~~~~-lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vid  264 (373)
                      .++|||+|+ |.+|...++.+... |. +|++++++.++.+.+.+ .++..+ .|..+ +.   +.+.+... ++|+||+
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~-d~---~~~~~~~~-~~d~Vih   97 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRLGDLVKHERMHFFEGDITI-NK---EWVEYHVK-KCDVILP   97 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTTGGGGGSTTEEEEECCTTT-CH---HHHHHHHH-HCSEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhhhhhccCCCeEEEeCccCC-CH---HHHHHHhc-cCCEEEE
Confidence            478999997 99999999888877 88 89999988766544433 233322 23221 21   12222222 6899999


Q ss_pred             ccCC
Q 017336          265 CTGN  268 (373)
Q Consensus       265 ~~g~  268 (373)
                      +.+.
T Consensus        98 ~A~~  101 (372)
T 3slg_A           98 LVAI  101 (372)
T ss_dssp             CBCC
T ss_pred             cCcc
Confidence            8773

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=95.20  E-value=0.039  Score=49.31  Aligned_cols=69  Identities=25%  Similarity=0.184  Sum_probs=47.1

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      ++|||+|+ |.+|...++.+...|. +|+++++++.+.+ ++  ++..+.    .+-. .+.+.+... ++|+||++.+.
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~--~~~~~~----~Dl~-~~~~~~~~~-~~d~Vih~a~~   72 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGNKA-IN--DYEYRV----SDYT-LEDLINQLN-DVDAVVHLAAT   72 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC--------CCEEEE----CCCC-HHHHHHHTT-TCSEEEECCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCccc-CC--ceEEEE----cccc-HHHHHHhhc-CCCEEEEcccc
Confidence            68999997 9999999999999998 8999988855544 33  333221    1112 344555544 79999999874

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=95.19  E-value=0.089  Score=50.97  Aligned_cols=84  Identities=17%  Similarity=0.139  Sum_probs=52.6

Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE-cCCh-----------------hHHHHHHhcCCcee-ecCCCCC
Q 017336          185 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSS-----------------KRFEEAKKFGVTDF-VNTSEHD  244 (373)
Q Consensus       185 ~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~-~~~~-----------------~~~~~~~~lg~~~v-i~~~~~~  244 (373)
                      .+++++++||+|+ |++|...++.+...|+++|+.+ +++.                 +..+.+++.|.... +..+-.+
T Consensus       247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd  326 (525)
T 3qp9_A          247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTD  326 (525)
T ss_dssp             SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTS
T ss_pred             eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCC
Confidence            3567899999987 9999999988888899667777 7762                 12333445566432 2222112


Q ss_pred             c-cHHHHHHHHcC-CCccEEEEccCC
Q 017336          245 R-PIQEVIAEMTN-GGVDRSVECTGN  268 (373)
Q Consensus       245 ~-~~~~~~~~~~~-~~~d~vid~~g~  268 (373)
                      . .+.+.+.+... +++|.||++.|.
T Consensus       327 ~~~v~~~~~~i~~~g~id~vVh~AGv  352 (525)
T 3qp9_A          327 AEAAARLLAGVSDAHPLSAVLHLPPT  352 (525)
T ss_dssp             HHHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHhcCCCcEEEECCcC
Confidence            1 13333333321 379999999884

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=95.19  E-value=0.13  Score=43.98  Aligned_cols=95  Identities=8%  Similarity=0.042  Sum_probs=60.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      ...++|+|+|+|.+|...++.+...|.  |+++++++++.+.++ .+...+. -+..+   .+.+.+..-.++|.|+-++
T Consensus         7 ~~~~~viI~G~G~~G~~la~~L~~~g~--v~vid~~~~~~~~~~-~~~~~i~-gd~~~---~~~l~~a~i~~ad~vi~~~   79 (234)
T 2aef_A            7 AKSRHVVICGWSESTLECLRELRGSEV--FVLAEDENVRKKVLR-SGANFVH-GDPTR---VSDLEKANVRGARAVIVDL   79 (234)
T ss_dssp             ---CEEEEESCCHHHHHHHHHSTTSEE--EEEESCGGGHHHHHH-TTCEEEE-SCTTC---HHHHHHTTCTTCSEEEECC
T ss_pred             CCCCEEEEECCChHHHHHHHHHHhCCe--EEEEECCHHHHHHHh-cCCeEEE-cCCCC---HHHHHhcCcchhcEEEEcC
Confidence            356789999999999998888888786  888999888888777 6654332 22222   1234333223799999999


Q ss_pred             CChHh---HHHHHHHhhcCCcEEEEE
Q 017336          267 GNIDN---MISAFECVHDGWGVAVLV  289 (373)
Q Consensus       267 g~~~~---~~~~~~~l~~~~g~~v~~  289 (373)
                      +..+.   .....+.+.++ .+++.-
T Consensus        80 ~~d~~n~~~~~~a~~~~~~-~~iia~  104 (234)
T 2aef_A           80 ESDSETIHCILGIRKIDES-VRIIAE  104 (234)
T ss_dssp             SCHHHHHHHHHHHHHHCSS-SEEEEE
T ss_pred             CCcHHHHHHHHHHHHHCCC-CeEEEE
Confidence            87432   22344555553 455554

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=95.18  E-value=0.13  Score=45.53  Aligned_cols=74  Identities=24%  Similarity=0.247  Sum_probs=53.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  270 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  270 (373)
                      +|.|+|+|.+|...+..+...|. .|+++++++++.+.+.+.|+...   .  +  ..+.+.     ..|+||.|+..+.
T Consensus         2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~---~--~--~~~~~~-----~~Dvvi~~vp~~~   68 (296)
T 2gf2_A            2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDVFPDACKEFQDAGEQVV---S--S--PADVAE-----KADRIITMLPTSI   68 (296)
T ss_dssp             CEEEECCSTTHHHHHHHHHHTTC-CEEEECSSTHHHHHHHTTTCEEC---S--S--HHHHHH-----HCSEEEECCSSHH
T ss_pred             eEEEEeccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeec---C--C--HHHHHh-----cCCEEEEeCCCHH
Confidence            58899999999998888888898 79999999998888887765321   1  1  222221     3688998887655


Q ss_pred             hHHHHHH
Q 017336          271 NMISAFE  277 (373)
Q Consensus       271 ~~~~~~~  277 (373)
                      .....+.
T Consensus        69 ~~~~v~~   75 (296)
T 2gf2_A           69 NAIEAYS   75 (296)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            5555554

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=95.18  E-value=0.055  Score=46.93  Aligned_cols=100  Identities=16%  Similarity=0.096  Sum_probs=63.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHH-HcCCCcc
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAE-MTNGGVD  260 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~-~~~~~~d  260 (373)
                      ..++.+||=+|+|. |..++.+++.....+|++++.+++..+.+++    +|...+- ....+  ..+.... ...+.||
T Consensus        78 ~~~~~~vLDiG~G~-G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~-~~~~d--~~~~~~~~~~~~~fD  153 (249)
T 3g89_A           78 WQGPLRVLDLGTGA-GFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGAR-ALWGR--AEVLAREAGHREAYA  153 (249)
T ss_dssp             CCSSCEEEEETCTT-TTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEE-EEECC--HHHHTTSTTTTTCEE
T ss_pred             cCCCCEEEEEcCCC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceE-EEECc--HHHhhcccccCCCce
Confidence            45788898888764 6666777777643489999999998887764    4654321 11111  2111110 1124799


Q ss_pred             EEEEccCC--hHhHHHHHHHhhcCCcEEEEEc
Q 017336          261 RSVECTGN--IDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       261 ~vid~~g~--~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      +|+...-.  ..+++.+.+.|+++ |+++.+-
T Consensus       154 ~I~s~a~~~~~~ll~~~~~~Lkpg-G~l~~~~  184 (249)
T 3g89_A          154 RAVARAVAPLCVLSELLLPFLEVG-GAAVAMK  184 (249)
T ss_dssp             EEEEESSCCHHHHHHHHGGGEEEE-EEEEEEE
T ss_pred             EEEECCcCCHHHHHHHHHHHcCCC-eEEEEEe
Confidence            99875322  35677888899997 9988763

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=95.18  E-value=0.086  Score=52.02  Aligned_cols=103  Identities=19%  Similarity=0.207  Sum_probs=64.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh---------hHHH----HHHhcCCceeecCCCCC--ccHHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS---------KRFE----EAKKFGVTDFVNTSEHD--RPIQEVI  251 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~---------~~~~----~~~~lg~~~vi~~~~~~--~~~~~~~  251 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|++++++.         ++.+    .+++.|...+.|..+..  ..+.+.+
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~   85 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGA-KVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETA   85 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHH
Confidence            4688999998 7999999999999999 888887643         3322    23344554455544432  1233333


Q ss_pred             HHHcCCCccEEEEccCCh-------------------------HhHHHHHHHhhc-CCcEEEEEcCC
Q 017336          252 AEMTNGGVDRSVECTGNI-------------------------DNMISAFECVHD-GWGVAVLVGVP  292 (373)
Q Consensus       252 ~~~~~~~~d~vid~~g~~-------------------------~~~~~~~~~l~~-~~g~~v~~g~~  292 (373)
                      .+.. |++|+++++.|..                         .....++..|+. +.|+||.+++.
T Consensus        86 ~~~~-G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~  151 (604)
T 2et6_A           86 VKNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSP  151 (604)
T ss_dssp             HHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             HHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCH
Confidence            3333 4799999998831                         123345555632 23899998763

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=95.17  E-value=0.041  Score=49.23  Aligned_cols=45  Identities=22%  Similarity=0.256  Sum_probs=39.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT  235 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~  235 (373)
                      ++|-++|-|.+|...+.-+...|+ .|++.++++++.+.+.+.|+.
T Consensus         4 ~kIgfIGlG~MG~~mA~~L~~~G~-~v~v~dr~~~~~~~l~~~Ga~   48 (300)
T 3obb_A            4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGAS   48 (300)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCE
T ss_pred             CEEEEeeehHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHcCCE
Confidence            478999999999988887778898 899999999999999888874

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=95.16  E-value=0.064  Score=46.94  Aligned_cols=79  Identities=18%  Similarity=0.166  Sum_probs=48.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEc-CChhHHHHH----HhcCCce-e--ecCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEEA----KKFGVTD-F--VNTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~-~~~~~~~~~----~~lg~~~-v--i~~~~~~--~~~~~~~~~~~~  256 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++++ ++.++.+..    ++.+... +  .|..+.+  ..+.+.+.+.. 
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-  101 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDAGM-AVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF-  101 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             cCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc-
Confidence            4688999987 8999999999999999 788876 444443322    2233322 2  2322211  01222232322 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|++|++.|.
T Consensus       102 g~id~li~nAg~  113 (269)
T 3gk3_A          102 GKVDVLINNAGI  113 (269)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999873

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=95.15  E-value=0.056  Score=47.22  Aligned_cols=78  Identities=22%  Similarity=0.216  Sum_probs=47.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEE-EcCChhHHHHH----HhcCCce-ee--cCCCCCccHHHHHH---HHc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIG-VDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIA---EMT  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~-~~~~~~~~~~~----~~lg~~~-vi--~~~~~~~~~~~~~~---~~~  255 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++ ..++.++.+..    ++.+... ++  |..+.+ .+.+.+.   +..
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~  102 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGF-NIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANRE-QCREVLEHEIAQH  102 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHh
Confidence            3578999987 8999999999999999 6644 55655544332    2333322 22  222211 1222222   222


Q ss_pred             CCCccEEEEccCC
Q 017336          256 NGGVDRSVECTGN  268 (373)
Q Consensus       256 ~~~~d~vid~~g~  268 (373)
                       +++|++|++.|.
T Consensus       103 -g~id~li~nAg~  114 (267)
T 4iiu_A          103 -GAWYGVVSNAGI  114 (267)
T ss_dssp             -CCCSEEEECCCC
T ss_pred             -CCccEEEECCCC
Confidence             379999999873

>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*

Probab=95.15  E-value=0.04  Score=49.18  Aligned_cols=97  Identities=13%  Similarity=0.115  Sum_probs=62.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC--------CceeecCCCCCccHHHHHHHHcCCCc
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG--------VTDFVNTSEHDRPIQEVIAEMTNGGV  259 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg--------~~~vi~~~~~~~~~~~~~~~~~~~~~  259 (373)
                      .+++||++|+|. |..+..+++..+..+|++++.+++..+.+++.-        .+.+ .....+  ..+.+.. ..+.|
T Consensus        90 ~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v-~~~~~D--~~~~l~~-~~~~f  164 (296)
T 1inl_A           90 NPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRA-EIVIAN--GAEYVRK-FKNEF  164 (296)
T ss_dssp             SCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTE-EEEESC--HHHHGGG-CSSCE
T ss_pred             CCCEEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCce-EEEECc--HHHHHhh-CCCCc
Confidence            458999998764 556667777666559999999999888876631        1111 011111  3222222 23479


Q ss_pred             cEEEEccCC-----------hHhHHHHHHHhhcCCcEEEEEc
Q 017336          260 DRSVECTGN-----------IDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       260 d~vid~~g~-----------~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      |+|+.-...           .+++..+.+.|+++ |.++...
T Consensus       165 D~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  205 (296)
T 1inl_A          165 DVIIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAET  205 (296)
T ss_dssp             EEEEEEC----------CCSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             eEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            998852211           36788999999997 9988763

>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*

Probab=95.15  E-value=0.043  Score=49.63  Aligned_cols=98  Identities=15%  Similarity=0.115  Sum_probs=64.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC--------ceeecCCCCCccHHHHHHHHcCCC
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--------TDFVNTSEHDRPIQEVIAEMTNGG  258 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~--------~~vi~~~~~~~~~~~~~~~~~~~~  258 (373)
                      .++++||.+|+|. |..+..+++..+..+|++++.+++-.+.+++.-.        +.+ .....+  ..+.+.. ..+.
T Consensus       115 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v-~~~~~D--~~~~l~~-~~~~  189 (321)
T 2pt6_A          115 KEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRV-NVFIED--ASKFLEN-VTNT  189 (321)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTE-EEEESC--HHHHHHH-CCSC
T ss_pred             CCCCEEEEEcCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcE-EEEEcc--HHHHHhh-cCCC
Confidence            3568999998765 5566677776554599999999999888876311        111 111112  4333332 2347


Q ss_pred             ccEEEEccC----------ChHhHHHHHHHhhcCCcEEEEEc
Q 017336          259 VDRSVECTG----------NIDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       259 ~d~vid~~g----------~~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      ||+|+....          ..+++..+.+.|+++ |.++...
T Consensus       190 fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  230 (321)
T 2pt6_A          190 YDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPN-GYCVAQC  230 (321)
T ss_dssp             EEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            999884331          146788999999997 9988753

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.15  E-value=0.03  Score=48.62  Aligned_cols=81  Identities=21%  Similarity=0.263  Sum_probs=47.3

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEc-CChhH----HHHHHhcCCce-ee--cCCCCC--ccHHHHHHHH
Q 017336          186 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKR----FEEAKKFGVTD-FV--NTSEHD--RPIQEVIAEM  254 (373)
Q Consensus       186 ~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~-~~~~~----~~~~~~lg~~~-vi--~~~~~~--~~~~~~~~~~  254 (373)
                      ..++++|||+|+ |++|.+.+..+...|+ +|++++ ++.++    .+.+++.+... ++  |..+.+  ..+.+.+.+.
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGF-RVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAE   88 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTE-EEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence            456789999987 8999999999989999 777765 43332    22333444432 22  222211  1122223333


Q ss_pred             cCCCccEEEEccCC
Q 017336          255 TNGGVDRSVECTGN  268 (373)
Q Consensus       255 ~~~~~d~vid~~g~  268 (373)
                      . +++|++|++.|.
T Consensus        89 ~-g~id~lv~~Ag~  101 (256)
T 3ezl_A           89 V-GEIDVLVNNAGI  101 (256)
T ss_dssp             T-CCEEEEEECCCC
T ss_pred             c-CCCCEEEECCCC
Confidence            2 379999999873

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=95.14  E-value=0.034  Score=48.37  Aligned_cols=68  Identities=19%  Similarity=0.213  Sum_probs=47.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      .+ +++|+|+|++|.+++..+...|+++|++++++.++.+.+.+ ++.   ...+    ++.+.+     ..+|+||+++
T Consensus       108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~---~~~~----~~~~~~-----~~aDiVInat  174 (253)
T 3u62_A          108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKI---FSLD----QLDEVV-----KKAKSLFNTT  174 (253)
T ss_dssp             CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEE---EEGG----GHHHHH-----HTCSEEEECS
T ss_pred             CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHccc---CCHH----HHHhhh-----cCCCEEEECC
Confidence            45 99999999999999999999998789999999887655432 221   1111    122211     1589999988


Q ss_pred             CC
Q 017336          267 GN  268 (373)
Q Consensus       267 g~  268 (373)
                      +.
T Consensus       175 p~  176 (253)
T 3u62_A          175 SV  176 (253)
T ss_dssp             ST
T ss_pred             CC
Confidence            53

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=95.12  E-value=0.04  Score=50.32  Aligned_cols=74  Identities=15%  Similarity=0.121  Sum_probs=47.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-Hhc----CCcee-ecCCCCCccHHHHHHHHcCC-Ccc
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF----GVTDF-VNTSEHDRPIQEVIAEMTNG-GVD  260 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~l----g~~~v-i~~~~~~~~~~~~~~~~~~~-~~d  260 (373)
                      +++|||+|+ |.+|...++.+...|+ +|++++++.++.+.+ +.+    ++..+ .|..+.     +.+.+...+ ++|
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-----~~~~~~~~~~~~d   82 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQ-----NKLLESIREFQPE   82 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCH-----HHHHHHHHHHCCS
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCCCcccchhhHhhccCCceEEEEccccCH-----HHHHHHHHhcCCC
Confidence            578999997 9999999999988998 899998876443222 111    22222 222221     123333222 689


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      +||++.+.
T Consensus        83 ~vih~A~~   90 (357)
T 1rkx_A           83 IVFHMAAQ   90 (357)
T ss_dssp             EEEECCSC
T ss_pred             EEEECCCC
Confidence            99999883

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=95.09  E-value=0.051  Score=46.97  Aligned_cols=98  Identities=17%  Similarity=0.154  Sum_probs=68.1

Q ss_pred             ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce---eecCCCCCccHHHHHHHHc
Q 017336          183 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD---FVNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       183 ~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~---vi~~~~~~~~~~~~~~~~~  255 (373)
                      ...+.++.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++    .|...   ++..+-.+  +     ...
T Consensus        41 l~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~-----~~~  111 (257)
T 3f4k_A           41 INELTDDAKIADIGCGT-GGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDN--L-----PFQ  111 (257)
T ss_dssp             SCCCCTTCEEEEETCTT-SHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS--C-----SSC
T ss_pred             HhcCCCCCeEEEeCCCC-CHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhh--C-----CCC
Confidence            34678899999999975 8888899998887 99999999988877654    34321   22111111  0     011


Q ss_pred             CCCccEEEEc-----cCChHhHHHHHHHhhcCCcEEEEEc
Q 017336          256 NGGVDRSVEC-----TGNIDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       256 ~~~~d~vid~-----~g~~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      .+.||+|+..     .+....+..+.+.|+|+ |++++..
T Consensus       112 ~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pg-G~l~~~~  150 (257)
T 3f4k_A          112 NEELDLIWSEGAIYNIGFERGMNEWSKYLKKG-GFIAVSE  150 (257)
T ss_dssp             TTCEEEEEEESCSCCCCHHHHHHHHHTTEEEE-EEEEEEE
T ss_pred             CCCEEEEEecChHhhcCHHHHHHHHHHHcCCC-cEEEEEE
Confidence            2379999763     22335688899999997 9998775

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=95.07  E-value=0.08  Score=48.58  Aligned_cols=88  Identities=20%  Similarity=0.205  Sum_probs=59.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .|++|.|+|.|.+|...++.++.+|. +|++.+++. +.+.+.+.|+...      +  +.+.+.     ..|+|+.++.
T Consensus       175 ~gktvGIIGlG~IG~~vA~~l~~fG~-~V~~~d~~~-~~~~~~~~g~~~~------~--l~ell~-----~aDvV~l~~P  239 (365)
T 4hy3_A          175 AGSEIGIVGFGDLGKALRRVLSGFRA-RIRVFDPWL-PRSMLEENGVEPA------S--LEDVLT-----KSDFIFVVAA  239 (365)
T ss_dssp             SSSEEEEECCSHHHHHHHHHHTTSCC-EEEEECSSS-CHHHHHHTTCEEC------C--HHHHHH-----SCSEEEECSC
T ss_pred             CCCEEEEecCCcccHHHHHhhhhCCC-EEEEECCCC-CHHHHhhcCeeeC------C--HHHHHh-----cCCEEEEcCc
Confidence            47899999999999999999999999 899998874 3445556665421      1  322221     4678777655


Q ss_pred             ChH----h-HHHHHHHhhcCCcEEEEEcC
Q 017336          268 NID----N-MISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       268 ~~~----~-~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..+    . -...+..|+++ +.++.++.
T Consensus       240 lt~~T~~li~~~~l~~mk~g-ailIN~aR  267 (365)
T 4hy3_A          240 VTSENKRFLGAEAFSSMRRG-AAFILLSR  267 (365)
T ss_dssp             SSCC---CCCHHHHHTSCTT-CEEEECSC
T ss_pred             CCHHHHhhcCHHHHhcCCCC-cEEEECcC
Confidence            321    1 24566777776 77777663

>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38

Probab=95.07  E-value=0.08  Score=47.67  Aligned_cols=100  Identities=24%  Similarity=0.366  Sum_probs=65.6

Q ss_pred             ccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh----cCCcee--ecCCCCCccHHHHHHHHc
Q 017336          183 VAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       183 ~~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~----lg~~~v--i~~~~~~~~~~~~~~~~~  255 (373)
                      ...++++++||=+|+|. |..++++++.++ ..+|++++.++.+.+.+++    +|...+  +..+...  +    .. .
T Consensus       113 ~l~~~~g~~VLDlg~G~-G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~--~----~~-~  184 (315)
T 1ixk_A          113 ALDPKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLH--I----GE-L  184 (315)
T ss_dssp             HHCCCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGG--G----GG-G
T ss_pred             HhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhh--c----cc-c
Confidence            34678899998888764 566677787763 2389999999998887754    465332  2211111  1    01 2


Q ss_pred             CCCccEEEE---ccCC-------------------------hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          256 NGGVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       256 ~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      .+.||+|+-   |+|.                         ..++..+.+.|+++ |+++....
T Consensus       185 ~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpG-G~lv~stc  247 (315)
T 1ixk_A          185 NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG-GILVYSTC  247 (315)
T ss_dssp             CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEES
T ss_pred             cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEEeC
Confidence            347999885   3331                         25678899999997 99987543

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=95.06  E-value=0.14  Score=47.70  Aligned_cols=111  Identities=13%  Similarity=0.108  Sum_probs=70.6

Q ss_pred             hhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-----------hcCC--cee--ecC
Q 017336          176 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-----------KFGV--TDF--VNT  240 (373)
Q Consensus       176 a~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-----------~lg~--~~v--i~~  240 (373)
                      .+..+.....++++++||=+|+|. |..++++|+..|+.+|++++.+++..+.++           .+|.  ..+  +.-
T Consensus       161 ~i~~il~~l~l~~gd~VLDLGCGt-G~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~G  239 (438)
T 3uwp_A          161 LVAQMIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERG  239 (438)
T ss_dssp             HHHHHHHHHCCCTTCEEEEESCTT-SHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEEC
T ss_pred             HHHHHHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEEC
Confidence            344456677899999999899875 778888898889867999999986555443           2343  222  211


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccC--Ch---HhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          241 SEHDRPIQEVIAEMTNGGVDRSVECTG--NI---DNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~d~vid~~g--~~---~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +-.+..+    .... ..+|+|+-..-  .+   ..+...++.|+++ |+++..-...
T Consensus       240 D~~~lp~----~d~~-~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPG-GrIVssE~f~  291 (438)
T 3uwp_A          240 DFLSEEW----RERI-ANTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSKPFA  291 (438)
T ss_dssp             CTTSHHH----HHHH-HTCSEEEECCTTCCHHHHHHHHHHHTTSCTT-CEEEESSCSS
T ss_pred             cccCCcc----cccc-CCccEEEEcccccCchHHHHHHHHHHcCCCC-cEEEEeeccc
Confidence            1111111    1111 15899985211  11   3456778889997 9999875543

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=95.05  E-value=0.19  Score=45.01  Aligned_cols=70  Identities=23%  Similarity=0.273  Sum_probs=50.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC--hhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS--SKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~--~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .+|.|+|.|.+|...++.+...|...|++.+++  +++.+.+++.|+...   .+    ..+.+.     ..|+||-|+.
T Consensus        25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~---~~----~~e~~~-----~aDvVi~~vp   92 (312)
T 3qsg_A           25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCK---AS----VAEVAG-----ECDVIFSLVT   92 (312)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEEC---SC----HHHHHH-----HCSEEEECSC
T ss_pred             CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEe---CC----HHHHHh-----cCCEEEEecC
Confidence            579999999999998888888887679999986  578888888776421   11    222222     3688888877


Q ss_pred             ChHh
Q 017336          268 NIDN  271 (373)
Q Consensus       268 ~~~~  271 (373)
                      .+..
T Consensus        93 ~~~~   96 (312)
T 3qsg_A           93 AQAA   96 (312)
T ss_dssp             TTTH
T ss_pred             chhH
Confidence            6443

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=95.05  E-value=0.029  Score=50.77  Aligned_cols=72  Identities=21%  Similarity=0.288  Sum_probs=47.2

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .+|||+|+ |.+|...++.+...|+ +|++++++..+.+.+...++..+ .|..+     .+.+.+... ++|+||++.+
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d-----~~~~~~~~~-~~d~vih~a~   86 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLAYLEPECRVAEMLD-----HAGLERALR-GLDGVIFSAG   86 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGGGGCCEEEECCTTC-----HHHHHHHTT-TCSEEEEC--
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhccCCeEEEEecCCC-----HHHHHHHHc-CCCEEEECCc
Confidence            37999997 9999999999988998 89999887665443333344332 22222     123444443 6999999987


Q ss_pred             C
Q 017336          268 N  268 (373)
Q Consensus       268 ~  268 (373)
                      .
T Consensus        87 ~   87 (342)
T 2x4g_A           87 Y   87 (342)
T ss_dssp             -
T ss_pred             c
Confidence            4

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=95.05  E-value=0.13  Score=46.63  Aligned_cols=35  Identities=23%  Similarity=0.366  Sum_probs=31.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      .+.+|+|+|+|++|..++..+...|.+++..++.+
T Consensus        33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D   67 (340)
T 3rui_A           33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG   67 (340)
T ss_dssp             HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence            46899999999999999999999999999998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	373
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	8e-50
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	6e-45
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	1e-43
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	1e-41
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	1e-40
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	3e-40
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	2e-38
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	2e-36
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	2e-34
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	2e-34
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	4e-34
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	7e-34
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	2e-27
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	2e-21
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	3e-18
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	4e-17
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	6e-17
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	1e-16
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	4e-16
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	1e-14
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	2e-14
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	3e-13
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	6e-13
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	1e-12
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	3e-12
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	5e-12
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	5e-11
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	8e-11
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	4e-10
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	7e-10
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	7e-06
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	2e-05
d1yb5a1	150	b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas	3e-05
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	0.004

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  163 bits (413), Expect = 8e-50
 Identities = 71/175 (40%), Positives = 104/175 (59%)

Query: 161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 220
           AP +KVC++ CG STG GA +   K + GS+  VFGLG VGL+   G + AGASRIIG+D
Sbjct: 2   APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGID 61

Query: 221 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 280
            +  +FE+A   G T+ ++  +  +PI EV++EMT   V  + E  G+++ MI A    H
Sbjct: 62  LNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCH 121

Query: 281 DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 335
             +G +V+VGVP    +    P+ +   RT KG  FG  K R D+P +V  ++ K
Sbjct: 122 MNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 176

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  150 bits (380), Expect = 6e-45
 Identities = 79/175 (45%), Positives = 113/175 (64%), Gaps = 2/175 (1%)

Query: 161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 220
           APL+  C++ CG +TG GA +N AK   GS+ AVFGLG VG +A  G + AGASRIIGV 
Sbjct: 1   APLES-CLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVG 59

Query: 221 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 280
               +F +A + G T+ +N  ++D+PI EVI E TNGGVD +VEC G I+ M++A +  +
Sbjct: 60  THKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTY 119

Query: 281 DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 335
            G GV V++G+ S +      P+ +L  R+LKG+ FG +K   ++  +VD YM K
Sbjct: 120 CGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKK 173

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score =  147 bits (370), Expect = 1e-43
 Identities = 77/175 (44%), Positives = 112/175 (64%), Gaps = 2/175 (1%)

Query: 161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 220
           A L++VC++ CG S+G GA +N AK   GS+ AVFGLG VGL+A  G +IAGASRII +D
Sbjct: 1   ANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAID 60

Query: 221 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 280
            + ++F +AK  G TD +N  E D+P+Q+VI E+T GGVD S++C G    + +A +C  
Sbjct: 61  INGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTV 120

Query: 281 DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 335
            GWG   +VG    +       ++V+  R++ GTFFG +K    +P++V  Y NK
Sbjct: 121 LGWGSCTVVGAKVDEMTIP--TVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNK 173

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score =  142 bits (357), Expect = 1e-41
 Identities = 81/175 (46%), Positives = 117/175 (66%)

Query: 161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 220
           +PL+KVC++ CG STG G+ + VAK  +GS+ AVFGLG VGL+   G + AGA+RIIGVD
Sbjct: 1   SPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVD 60

Query: 221 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 280
            +  +F +AK+ G T+ VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  
Sbjct: 61  INKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQ 120

Query: 281 DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 335
           + +GV+V+VGVP         P+ +L+ RT KG  FG +K +  +P +V  +M K
Sbjct: 121 EAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 175

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  139 bits (351), Expect = 1e-40
 Identities = 93/175 (53%), Positives = 119/175 (68%)

Query: 161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 220
           APLDKVC+L CG+STG GA +N AK E GS  AVFGLG VGLA   G ++AGASRIIGVD
Sbjct: 1   APLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVD 60

Query: 221 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 280
            +  +F  AK+FG T+ +N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H
Sbjct: 61  INKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACH 120

Query: 281 DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 335
            GWGV+V+VGV +      T+P  ++  RT KGT FG +K    +P +V  YM+K
Sbjct: 121 KGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 175

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  138 bits (349), Expect = 3e-40
 Identities = 85/189 (44%), Positives = 119/189 (62%), Gaps = 1/189 (0%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y          FP I GH  
Sbjct: 9   AAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLG 68

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
           AG+VESVGEGV+ L+ GD V+P++  +CG+C+ C +  +N+C  +R+   +G+M  DG S
Sbjct: 69  AGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTS 127

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+ + H++GTSTFSEYTVV    VAKI+PL  +D+    +        A   +  
Sbjct: 128 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAFELMHS 187

Query: 186 PERGSSVAV 194
            +   +V  
Sbjct: 188 GKSIRTVVK 196

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score =  134 bits (337), Expect = 2e-38
 Identities = 80/190 (42%), Positives = 111/190 (58%), Gaps = 1/190 (0%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAVAWEA KPL+I+++EV  P A E+RIKI  T +C TDLY          FP + GHE 
Sbjct: 11  AAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEG 70

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
           AG+VESVG GV++ + G+ V+P+F  +CG+CR C+S  +N C     N    VM +  ++
Sbjct: 71  AGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM-SPKET 129

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G  V  FLGTSTFS+YTVV+   VAKI+P   LD+       + +   A   +  
Sbjct: 130 RFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKH 189

Query: 186 PERGSSVAVF 195
            +   +V   
Sbjct: 190 GKCIRTVLSL 199

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score =  129 bits (325), Expect = 2e-36
 Identities = 71/192 (36%), Positives = 115/192 (59%), Gaps = 7/192 (3%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AA+AW+ G PL I+++EV+PP+A EVRI++  T +C TD+   + K +  LFP + GHE 
Sbjct: 11  AAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKALFPVVLGHEC 69

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI---NPVRGVMLAD 122
           AG+VESVG GV++ + GD V+P F  +C  C+ C S ++N+C  LR      +   ++ D
Sbjct: 70  AGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMED 129

Query: 123 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 182
             SRF+  G  + HF+G S+FS+YTVV    +A+++    LD +   +    + +   ++
Sbjct: 130 RTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPFES-INDAID 188

Query: 183 VAKPERGSSVAV 194
           + K   G S+  
Sbjct: 189 LMKE--GKSIRT 198

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score =  123 bits (308), Expect = 2e-34
 Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 4/176 (2%)

Query: 162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR 221
           P++ +  L CG+ TG GA +N  K    SS   +G GAVGL+A   A++ GAS II VD 
Sbjct: 2   PIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDI 61

Query: 222 SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD 281
              R E AK+ G T  +N+   D      I E+T+GGV+ ++E TG+ + +    +    
Sbjct: 62  VESRLELAKQLGATHVINSKTQD--PVAAIKEITDGGVNFALESTGSPEILKQGVDA-LG 118

Query: 282 GWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMNKQ 336
             G   +VG P           ++L   +T+ G   G+  P+  +P +V +Y   +
Sbjct: 119 ILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGK 174

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score =  122 bits (307), Expect = 2e-34
 Identities = 95/175 (54%), Positives = 121/175 (69%), Gaps = 1/175 (0%)

Query: 161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 220
           APLD VC+L CGVSTG GA +N AK E GS+ AVFGLGAVGLAA  G   AGA RII VD
Sbjct: 1   APLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVD 60

Query: 221 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 280
            +  +FE+AK FG TDFVN ++H  PI +V+++MTNGGVD S+EC GN+  M +A E   
Sbjct: 61  LNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCL 120

Query: 281 DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 335
            GWGV+VLVG      V  T+PI ++  RT KG+ FG +K +  +P +V  Y++K
Sbjct: 121 KGWGVSVLVGWTDLHDVA-TRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDK 174

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score =  123 bits (308), Expect = 4e-34
 Identities = 86/193 (44%), Positives = 115/193 (59%), Gaps = 9/193 (4%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TP  P I GHEA
Sbjct: 11  AAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP-LPVIAGHEA 69

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
           AG+VES+GEGV+ +  GD V+P+FT +CG CR C+    N C    ++  RG M  DG S
Sbjct: 70  AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTS 128

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK--VCILSCGVSTGLGATLNV 183
           RF+  G+P++HFLGTSTFS+YTVV    VAKI+    LD     +L       +    ++
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALDPLITHVLPFE---KINEGFDL 185

Query: 184 AKPERGSSVAVFG 196
            +   G S+    
Sbjct: 186 LRS--GESIRTIL 196

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  122 bits (306), Expect = 7e-34
 Identities = 71/197 (36%), Positives = 109/197 (55%), Gaps = 12/197 (6%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           AAVAWE  KPL ++ + VAPP+A EVRIKI  + +C +D    +    +     +  HEA
Sbjct: 11  AAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKFPVILG-HEA 69

Query: 66  AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 125
            GVVES+G GV+ ++ GD V+P+F  +CG CR C+S  SN C+   +   +  ++AD  S
Sbjct: 70  VGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGA-KTGLMADMTS 128

Query: 126 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 185
           RF+  G+P+ + +GTSTF+EYTVV    VAKI+P   ++ +                + +
Sbjct: 129 RFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLT----------LDQ 178

Query: 186 PERGSSVAVFGLGAVGL 202
             +   +   G G   +
Sbjct: 179 INKAFELLSSGQGVRSI 195

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score =  105 bits (262), Expect = 2e-27
 Identities = 51/221 (23%), Positives = 87/221 (39%), Gaps = 30/221 (13%)

Query: 1   MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRI 60
           +    AAV    G    +Q +++  PQ  EV +K+  T +C TDL   + K   P  P +
Sbjct: 1   LKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVP-LPAV 59

Query: 61  FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 120
            GHE +G++E++G  V++L+VGDHV+ +  G CG C  C +     C         G   
Sbjct: 60  LGHEGSGIIEAIGPNVTELQVGDHVV-LSYGYCGKCTQCNTGNPAYCSEFFGRNFSGAD- 117

Query: 121 ADGQSRFSINGE--PVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 178
           ++G      + +    +HF   S+F+ Y +       K+    P D++            
Sbjct: 118 SEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYAF------ 171

Query: 179 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGV 219
                                +  AA +  +      II +
Sbjct: 172 -------------------DEINQAAIDSRKGITLKPIIKI 193

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 88.5 bits (218), Expect = 2e-21
 Identities = 41/179 (22%), Positives = 68/179 (37%), Gaps = 16/179 (8%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 65
           A  A+ A +PL   D+    P   +V+I+I Y  +C +DL+   S+    ++P + GHE 
Sbjct: 3   AVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEI 62

Query: 66  AGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQ 124
            G V +VG+ V     GD V +      C  C  C   + N C              D  
Sbjct: 63  VGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYC--------------DHM 108

Query: 125 SRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP-LAPLDKVCILSCGVSTGLGATLN 182
           +    +  P         +S+  VVH   V +I      + +   ++      L   + 
Sbjct: 109 TGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERMLRGDVK 167

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 79.2 bits (194), Expect = 3e-18
 Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 6/166 (3%)

Query: 162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR 221
           PL+   +++  ++TG      +A  E GSSV V G+GAVGL    GA++ GA RIIGV  
Sbjct: 2   PLENAVMITDMMTTGFHG-AELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60

Query: 222 SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD 281
                E AK +G TD +N  ++     +V+      GVDR +   G  + +  A + V  
Sbjct: 61  RPICVEAAKFYGATDILNY-KNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKP 119

Query: 282 GWGVAVLVGVPSKDAVFMTKPIN---VLNERTLKGTFFGNYKPRTD 324
           G G+   +         +   +     +  +T+KG      + R +
Sbjct: 120 G-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAE 164

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 76.4 bits (187), Expect = 4e-17
 Identities = 37/203 (18%), Positives = 71/203 (34%), Gaps = 29/203 (14%)

Query: 1   MSSTA-AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPR 59
           M   A A V  +  +PL+ ++ E++      + ++I    +C +D++ +  +      P 
Sbjct: 1   MGLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPI 60

Query: 60  IFGHEAAGVVESVGEGVSDLEVGD-----HVLPVFTGECGDCRHCRSDV-SNMCDLLRIN 113
           I GHE AG V  V     DL          ++      CG+C  C+      +C   ++ 
Sbjct: 61  ILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVY 120

Query: 114 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCG 172
            +       G S +        H  G   +S + V+     V K++          L   
Sbjct: 121 GINR-----GCSEYP-------HLRG--CYSSHIVLDPETDVLKVSEKITHRLP--LKEA 164

Query: 173 VSTGLGATLNVAKPERGSSVAVF 195
                   L + +      V ++
Sbjct: 165 N-----KALELMESREALKVILY 182

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 76.0 bits (186), Expect = 6e-17
 Identities = 31/188 (16%), Positives = 63/188 (33%), Gaps = 18/188 (9%)

Query: 11  EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVE 70
           E  K       +  P    ++ IKI+   +C +D++           P + GHE  G V 
Sbjct: 16  EDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVV 75

Query: 71  SVG-EGVSDLEVGDH-VLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFS 128
            +G +  S L+VG    +      C +C  C++D    C                +   +
Sbjct: 76  KLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCT---------------KFVTT 120

Query: 129 INGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 188
            +    + ++    ++ Y  VH   V  I     ++ + +   GV       +       
Sbjct: 121 YSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFER-MEKGDVRY 179

Query: 189 GSSVAVFG 196
             ++  + 
Sbjct: 180 RFTLVGYD 187

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 74.6 bits (182), Expect = 1e-16
 Identities = 48/193 (24%), Positives = 76/193 (39%), Gaps = 30/193 (15%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHE 64
           AAV    G PL I++V+V  P   +V +KI+ + +C TDL+  E      P  P I GHE
Sbjct: 8   AAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHE 67

Query: 65  AAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 123
             G V +VG GV+ ++ GD V +P     CG C HC +    +C+               
Sbjct: 68  GVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCE--------------- 112

Query: 124 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 183
                   +    +     ++EY +     V  +    P +    +  G    +   L+ 
Sbjct: 113 -------SQQNTGYSVNGGYAEYVLADPNYVGIL----PKNVKATIHPGKLDDINQILDQ 161

Query: 184 AK--PERGSSVAV 194
            +     G  V  
Sbjct: 162 MRAGQIEGRIVLE 174

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 73.5 bits (179), Expect = 4e-16
 Identities = 43/198 (21%), Positives = 74/198 (37%), Gaps = 33/198 (16%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE--------SKGQTPLF 57
           A    E GKPL +Q++ V  P+  +V IK++   +C +D++  +         +      
Sbjct: 3   AVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKL 62

Query: 58  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 117
           P   GHE AG +E VG+ V     GD V        G+C +CR    ++CD  R   +  
Sbjct: 63  PVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINF 122

Query: 118 VMLADGQSRFSINGEPVNHFLGTSTFSEYTVV-HSGCVAKINPLAPLDKVCILSCGVSTG 176
                                    ++EY +V H   + K+  + P+    +     +  
Sbjct: 123 DG----------------------AYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEA 160

Query: 177 LGATLNVAKPERGSSVAV 194
           +    N      G  V +
Sbjct: 161 IDNLENFKA--IGRQVLI 176

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 69.2 bits (168), Expect = 1e-14
 Identities = 39/173 (22%), Positives = 66/173 (38%), Gaps = 8/173 (4%)

Query: 163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 222
           LD + +  C  +T   A     +   G +V + G G +GL     AR  GA  +I +  S
Sbjct: 3   LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGS 62

Query: 223 SKRFEEAKKFGVTDFVNTSEH--DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 280
             R + A++ G    +N  E   +   + ++      G D  +E TG+   ++   E + 
Sbjct: 63  PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLR 122

Query: 281 DGWGVAVLVGVPSKDAVFMTKPIN--VLNERTLKGTFFGNYKPRTDLPSVVDM 331
            G G   + GV         K     VL   T KG +  +    +     V +
Sbjct: 123 RG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD---TSHFVKTVSI 171

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 68.9 bits (167), Expect = 2e-14
 Identities = 36/194 (18%), Positives = 73/194 (37%), Gaps = 26/194 (13%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWES---KGQTPLFPRIFG 62
           +AV ++    L ++   +  P+  EV +++ Y  +C +D++++E           P + G
Sbjct: 4   SAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIG 62

Query: 63  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 122
           HEA+G V  VG+ V  L+ GD V       C  C+ C+    N+C               
Sbjct: 63  HEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCP-------------- 108

Query: 123 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 182
                  +             + Y V  +    K+     + ++   S  +   + A   
Sbjct: 109 -------DLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDA-FE 160

Query: 183 VAKPERGSSVAVFG 196
            A+ +  +++ V  
Sbjct: 161 AARKKADNTIKVMI 174

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 65.1 bits (157), Expect = 3e-13
 Identities = 39/193 (20%), Positives = 64/193 (33%), Gaps = 28/193 (14%)

Query: 6   AAVAWEAGKPLIIQDVEV-APPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 64
           AA   E  KPL I+DV+        +V ++I    +C TDL+  +      L P++    
Sbjct: 2   AARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTL 61

Query: 65  AAGVVESV---GEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 121
               V  +    EGV  LE GD V+       G C  CR+     C+             
Sbjct: 62  GHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCE------------- 108

Query: 122 DGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 181
                    G  ++       F+E+       V K+     ++        ++  L    
Sbjct: 109 ----NLEFPGLNIDGG-----FAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERLE 159

Query: 182 NVAKPERGSSVAV 194
                  G +V +
Sbjct: 160 KGEVL--GRAVLI 170

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 64.2 bits (155), Expect = 6e-13
 Identities = 50/195 (25%), Positives = 75/195 (38%), Gaps = 32/195 (16%)

Query: 6   AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-SKGQTPLFPRIFGHE 64
           AAV  +  +PL I++VE       EV ++IK   +C TDL+         P  P I GHE
Sbjct: 3   AAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHE 62

Query: 65  AAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 123
             G+VE VG GV+ L+VGD V +P     CG C +C S    +C                
Sbjct: 63  GVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLC---------------- 106

Query: 124 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI--LSCGVSTGLGATL 181
                   +    +     ++EY    +  V KI     ++   +  ++      L   +
Sbjct: 107 ------EHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQPLEKINEVFDRMLKGQI 160

Query: 182 NVAKPERGSSVAVFG 196
           N      G  V    
Sbjct: 161 N------GRVVLTLE 169

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 63.4 bits (153), Expect = 1e-12
 Identities = 32/166 (19%), Positives = 73/166 (43%), Gaps = 9/166 (5%)

Query: 169 LSCGVSTGLGATLNVAKPER-GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE 227
           L+    T   A    A+    G+ VA+ G+G +G  A +  ++   + +I +D   ++ +
Sbjct: 12  LADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLK 71

Query: 228 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAV 287
            A++ G    V+      P+++V+      GV+ +++  G+   +      +    G  +
Sbjct: 72  LAERLGADHVVDARRD--PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLI 128

Query: 288 LVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYM 333
           +VG   +      + I   +E + +G+  GNY    +L  +V + +
Sbjct: 129 IVGYGGELRFPTIRVI--SSEVSFEGSLVGNYV---ELHELVTLAL 169

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.6 bits (151), Expect = 3e-12
 Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 12/170 (7%)

Query: 169 LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE 228
           LS G+               G  V V G G +G+     A+  GA++++  D S+ R  +
Sbjct: 12  LSVGI-----HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSK 66

Query: 229 AKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAV 287
           AK+ G    +  S+          E   G   + ++ECTG   ++ +       G G  V
Sbjct: 67  AKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLV 125

Query: 288 LVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL 337
           LVG+ S+           + E  +KG F    +     P  + M  +K +
Sbjct: 126 LVGLGSEMTTVPLLHA-AIREVDIKGVF----RYCNTWPVAISMLASKSV 170

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 62.2 bits (150), Expect = 5e-12
 Identities = 37/216 (17%), Positives = 71/216 (32%), Gaps = 27/216 (12%)

Query: 7   AVAWEAGKPLIIQDVEV-------APPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPR 59
            V +     + +Q ++               V +K+  T++C +D +    +        
Sbjct: 4   GVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQ-VGL 62

Query: 60  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 119
           + GHE  G V   G  V +L++GD V   F   CG CR C+   + +C  +      G  
Sbjct: 63  VLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAY 122

Query: 120 LADGQSRFSINGEPVNHFLGTSTFSEYTVVHS--GCVAKINPLAPLDKVCILSCGVSTGL 177
                  ++               +EY +V      + K+       +   ++  V   +
Sbjct: 123 GYVDMGDWTG------------GQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQV 170

Query: 178 GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA 213
            + L+ A    G     F  G       +  +   A
Sbjct: 171 IS-LDDAPRGYG----EFDAGVPKKFVIDPHKTFSA 201

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.2 bits (142), Expect = 5e-11
 Identities = 30/198 (15%), Positives = 60/198 (30%), Gaps = 28/198 (14%)

Query: 7   AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPRIFGH 63
           ++       L +++  +  P   EV +++    +C +D+++WE           P + GH
Sbjct: 10  SLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGH 69

Query: 64  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 123
           EA+G VE VG  V  L+ GD V         +   C+    N+   +             
Sbjct: 70  EASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDD---- 125

Query: 124 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 183
                                 +   ++    K+     +  +      +   L A    
Sbjct: 126 -----------------GNLCRFYKHNAAFCYKLPDN--VKPLVTHRFPLEKALEA-FET 165

Query: 184 AKPERGSSVAVFGLGAVG 201
            K   G  + +       
Sbjct: 166 FKKGLGLKIML-KCDPSD 182

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 58.1 bits (139), Expect = 8e-11
 Identities = 35/173 (20%), Positives = 53/173 (30%), Gaps = 12/173 (6%)

Query: 159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIG 218
           P   L  V  L C   T     L   +   G  V V G+G +G    + A   GA  +  
Sbjct: 2   PQEQLAAVAPLLCAGITTYSP-LRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAF 60

Query: 219 VDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFEC 278
               +KR E AK  G  + VN                    D  +       N+      
Sbjct: 61  TTSEAKR-EAAKALGADEVVN------SRNADEMAAHLKSFDFILNTVAAPHNLDDFTTL 113

Query: 279 VHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM 331
           +    G   LVG P+           ++  R + G+  G      +   ++D 
Sbjct: 114 LKRD-GTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGG---IPETQEMLDF 162

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 56.4 bits (135), Expect = 4e-10
 Identities = 37/150 (24%), Positives = 56/150 (37%), Gaps = 20/150 (13%)

Query: 163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 222
           +  +  LS  + TG       A    GS+V V G G VGLAAA  AR+ GA+ +I  D +
Sbjct: 1   IRDLTCLSDILPTGYHG-AVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLN 59

Query: 223 SKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG-------------- 267
             R   AK  G      + +    + E IA +     VD +V+  G              
Sbjct: 60  PARLAHAKAQGFEIADLSLDTP--LHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHE 117

Query: 268 -NIDNMISAFECVHDGWGVAVLVGVPSKDA 296
                + S  +      G   + G+   + 
Sbjct: 118 APATVLNSLMQVTRVA-GKIGIPGLYVTED 146

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 55.4 bits (132), Expect = 7e-10
 Identities = 34/199 (17%), Positives = 56/199 (28%), Gaps = 28/199 (14%)

Query: 7   AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAA 66
             A      L   + E     + +  ++    S C +D++             I GHEA 
Sbjct: 3   GFAMLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAV 62

Query: 67  GVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSR 126
           G V  VG  V D + GD V+   T         ++      +                  
Sbjct: 63  GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSN------------------ 104

Query: 127 FSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP 186
             +             F EY  V+   +     LA L K   LS  V+       ++   
Sbjct: 105 -GMLAGWKFSNFKDGVFGEYFHVNDADMN----LAILPKDVDLSKLVTHVYHGFDHI--- 156

Query: 187 ERGSSVAVFGLGAVGLAAA 205
               ++ +       L  A
Sbjct: 157 --EEALLLMKDKPKDLIKA 173

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 43.3 bits (101), Expect = 7e-06
 Identities = 15/109 (13%), Positives = 31/109 (28%), Gaps = 3/109 (2%)

Query: 1   MSSTAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFP 58
           MS+  A V  +        +Q + +      +V +++ Y+S+   D           +  
Sbjct: 1   MSAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLAS-IPDGKIVKT 59

Query: 59  RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMC 107
             F          V         GD V+              S+ + + 
Sbjct: 60  YPFVPGIDLAGVVVSSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLH 108

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 41.7 bits (97), Expect = 2e-05
 Identities = 13/58 (22%), Positives = 20/58 (34%)

Query: 6  AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 63
          A V    G PL + D+     +  EV ++++   L   D         T L P     
Sbjct: 3  AWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPG 60

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (96), Expect = 3e-05
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 4/106 (3%)

Query: 6   AAVAWEAGKPL---IIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF- 61
           A   +E G P    +  D+ V  P+  +V IK+    +   + Y                
Sbjct: 5   AVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTP 64

Query: 62  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMC 107
           G + AGV+E+VG+  S  + GD V    T   G   +  +    + 
Sbjct: 65  GSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVY 110

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 35.9 bits (81), Expect = 0.004
 Identities = 20/183 (10%), Positives = 47/183 (25%), Gaps = 19/183 (10%)

Query: 1   MSSTAAAVAWEAGKP-----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 55
           M +  A +  + G+P         +++       EV +K   + +  +D+          
Sbjct: 1   MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQI------- 53

Query: 56  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 115
                 G   +   ++ G G ++         +F            +  +      +N  
Sbjct: 54  -----QGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFG 108

Query: 116 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 175
                A G     I              +  T          +   PL ++       ++
Sbjct: 109 TWRTHALGNDDDFIKLPNPAQSKANGKPNGLTDAK-SIETLYDGTKPLHELYQDGVA-NS 166

Query: 176 GLG 178
             G
Sbjct: 167 KDG 169

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	373
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	100.0
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	100.0
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	100.0
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	100.0
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	100.0
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	100.0
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	100.0
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	100.0
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	100.0
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	100.0
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	100.0
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	100.0
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.98
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.98
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.97
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.97
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.97
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.96
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.96
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.95
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.95
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.95
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.95
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.95
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.94
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.94
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.94
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.94
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.93
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.93
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.93
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.93
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.92
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.92
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.92
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.92
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.92
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.92
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.91
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.91
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.91
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.91
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.91
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.91
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.9
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.9
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.89
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.88
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.88
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.86
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.83
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.8
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.68
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.66
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.46
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.16
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.12
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.8
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.67
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.61
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.56
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.56
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.55
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.54
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.46
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.4
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.4
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.37
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.36
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.34
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.26
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.25
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.25
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.23
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.21
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.19
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.17
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.15
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.13
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.1
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.09
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.09
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.08
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	97.08
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.05
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.05
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	97.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	96.99
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	96.99
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	96.99
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	96.97
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	96.97
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.96
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.94
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.92
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	96.92
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.9
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.89
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.84
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.83
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	96.81
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	96.81
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.8
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	96.79
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.79
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.78
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	96.78
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.76
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.75
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.74
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.72
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.67
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.67
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	96.65
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.65
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.64
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.64
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.63
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.63
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.63
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.62
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.61
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.6
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.59
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.59
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.56
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	96.55
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.55
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.54
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	96.49
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.48
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.48
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.47
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	96.46
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.45
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.42
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.41
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.4
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.39
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.39
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	96.34
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.33
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.32
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.31
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.25
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.24
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	96.23
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.13
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.12
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	96.08
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	96.05
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	95.98
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.96
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	95.9
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	95.9
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.8
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	95.74
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.66
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	95.64
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	95.59
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.52
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.47
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	95.42
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	95.42
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	95.3
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	95.27
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.24
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	95.21
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.19
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	95.15
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.15
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	95.13
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.11
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	95.05
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	95.03
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	94.99
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.98
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.93
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	94.91
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	94.75
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	94.74
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	94.63
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	94.63
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	94.6
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	94.57
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	94.45
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.42
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.38
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.37
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.26
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	94.23
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	94.2
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	94.17
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	94.15
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	94.1
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.08
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.07
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	94.05
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	94.0
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	93.99
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	93.96
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.94
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.92
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	93.9
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	93.88
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.88
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	93.87
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	93.86
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	93.77
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.76
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	93.74
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	93.69
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.64
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	93.52
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.51
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.47
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	93.46
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	93.41
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	93.4
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	93.38
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	93.33
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.31
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	93.3
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.21
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.2
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	93.1
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.1
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	93.06
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	93.0
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.0
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.97
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	92.95
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	92.91
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	92.87
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	92.85
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	92.84
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	92.81
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	92.8
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	92.8
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	92.74
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	92.71
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	92.7
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	92.69
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	92.62
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	92.62
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	92.61
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	92.57
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	92.56
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	92.56
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.52
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	92.48
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	92.46
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.46
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	92.44
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	92.38
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	92.37
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	92.34
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	92.3
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	92.23
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	92.13
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	92.12
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	92.08
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.94
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	91.88
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	91.84
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	91.81
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	91.79
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	91.78
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	91.75
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	91.74
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	91.72
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	91.66
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	91.53
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	91.5
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	91.4
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	91.39
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	91.32
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	91.3
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	91.28
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	91.18
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	91.08
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.0
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	90.88
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	90.63
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	90.63
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	90.6
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	90.59
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	90.57
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	90.54
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	90.52
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	90.5
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	90.49
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	90.34
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	90.33
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	90.18
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	90.06
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	89.96
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	89.83
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	89.57
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	89.5
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	89.35
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	89.33
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	89.31
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	89.3
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	89.11
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	89.07
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	89.02
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	88.92
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	88.86
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	88.78
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	88.77
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.64
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	88.51
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	88.47
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	88.42
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	88.4
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	88.29
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	88.17
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.8
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.72
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	87.71
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	87.55
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	87.52
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	87.31
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	87.31
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	87.26
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	87.19
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	87.02
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	86.89
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	86.8
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	86.72
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	86.59
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	86.55
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	86.43
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	86.29
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	86.25
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	86.12
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	86.1
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	86.0
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	85.88
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	85.86
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	85.65
d1ebfa1	168	Homoserine dehydrogenase {Baker's yeast (Saccharom	85.63
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	85.55
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	85.34
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	85.25
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	84.93
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	84.92
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	84.71
d1p3ha_	99	Chaperonin-10 (GroES) {Mycobacterium tuberculosis	84.69
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	84.6
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.36
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	84.32
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	84.27
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	84.1
d2ax3a2	211	Hypothetical protein TM0922, N-terminal domain {Th	84.09
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	83.78
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	83.72
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	83.39
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	83.17
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.12
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	83.09
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	82.85
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	82.8
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	82.58
d1o58a_	293	O-acetylserine sulfhydrylase (Cysteine synthase) {	82.53
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	82.48
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	82.45
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	82.28
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	82.15
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	82.12
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	82.05
d1vl6a1	222	Malate oxidoreductase (malic enzyme) {Thermotoga m	82.02
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	81.93
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	81.71
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	81.45
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	81.34
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	81.29
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	81.19
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	80.68
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	80.44

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=1.6e-38  Score=270.42  Aligned_cols=193  Identities=41%  Similarity=0.661  Sum_probs=176.3

Q ss_pred             cccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 017336            2 SSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   81 (373)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   81 (373)
                      +++||++++++++|++++++++|+|+++||||||.++|||++|++.+.+......+|.++|||++|+|+++|++++.|++
T Consensus         7 ~~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~~~p~i~GhE~~G~v~~vG~~v~~~~~   86 (199)
T d1cdoa1           7 IKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQP   86 (199)
T ss_dssp             EEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCEEEEEEEECTTCCSCCT
T ss_pred             eEEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhcccccccccccccccceEEEEEcCCCceecC
Confidence            46889999999999999999999999999999999999999999999998777889999999999999999999999999


Q ss_pred             CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336           82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  161 (373)
Q Consensus        82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~  161 (373)
                      ||||++.+..+|+.|.+|+.++++.|.+.+.....+.. ..+......+|...+++.++|+||||+++++++++++|+++
T Consensus        87 GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP~~~  165 (199)
T d1cdoa1          87 GEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM-SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSV  165 (199)
T ss_dssp             TCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTT-SCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCTTS
T ss_pred             CCEEEEeeeccccccccccCCCcccccccccccccccc-cCcccceeeccceeecccccCCceEEEEEchHHEEECCCCC
Confidence            99999999999999999999999999998877655543 45556666677777777778999999999999999999999


Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEE
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF  195 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~  195 (373)
                      +++++|++.+++.|++.++......+.|++|||+
T Consensus       166 ~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         166 KLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             CCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            9999999999999999998887888999999984

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=100.00  E-value=5.8e-38  Score=266.03  Aligned_cols=194  Identities=44%  Similarity=0.743  Sum_probs=172.6

Q ss_pred             CcccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 017336            1 MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         1 m~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |++|||++++++++||+++++|+|+|+++||||||+++|||++|+++++|.+....+|+++|||++|+|+++|++++.++
T Consensus         4 ~~~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~~~p~v~GhE~~G~V~~vG~~V~~~~   83 (197)
T d2fzwa1           4 VIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLK   83 (197)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             ceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccccccccCCcceeeEEEeecCCceecC
Confidence            78999999999999999999999999999999999999999999999999888888999999999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||||++.+..+|+.|..|..+.++.|.+.......|.. ++....+..+|..+.++.+.|+||||+.+++.+++++|++
T Consensus        84 ~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~-~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp~~  162 (197)
T d2fzwa1          84 AGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPL  162 (197)
T ss_dssp             TTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCC-TTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTT
T ss_pred             CCCEEEEccccccccccccccCccccCcccccccccccc-CCccceeccCCcceecccccccceeEEEechHHEEECCCC
Confidence            999999999999999999999999999986665444433 4444555566666666777899999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEE
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF  195 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~  195 (373)
                      ++++++|++++++.|++.++......+.+++|||+
T Consensus       163 l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         163 IKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             SCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            99999999999999999986555556678898874

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=100.00  E-value=4.7e-37  Score=259.56  Aligned_cols=191  Identities=27%  Similarity=0.521  Sum_probs=160.2

Q ss_pred             CcccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 017336            1 MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         1 m~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |.+|+|+++.+.+++|++++++.|+|+++|||||+.++|||++|++++.|.++ .++|+++|||++|+|+++|+++++|+
T Consensus         1 ~k~~~Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~i~GHE~~G~V~~vG~~v~~~~   79 (194)
T d1f8fa1           1 LKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTELQ   79 (194)
T ss_dssp             CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             CceeEEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhccc-ccCCcccccceEEEeeecCccceeEc
Confidence            78899999999999999999999999999999999999999999999998765 46899999999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCccccc--CCCccccccCCcceeeEEEEecCceEeCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSI--NGEPVNHFLGTSTFSEYTVVHSGCVAKIN  158 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~--~g~~~~~~~~~G~~a~~~~v~~~~~~~~p  158 (373)
                      +||||+.. ..+|++|.+|++|+++.|++....++.|.. .+|...+..  .+....+..+.|+|+||..+++.+++++|
T Consensus        80 vGDrVv~~-~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip  157 (194)
T d1f8fa1          80 VGDHVVLS-YGYCGKCTQCNTGNPAYCSEFFGRNFSGAD-SEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVT  157 (194)
T ss_dssp             TTCEEEEC-CCCCSSSHHHHTTCGGGCTTHHHHSSSSSC-SSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEEC
T ss_pred             cCceeeee-cccccCChhhhCCCcccccccccceecccc-ccceeeeecCCceeeccccccccccceeEEEehHHEEECC
Confidence            99999665 458999999999999999987666555655 344333222  22233344556899999999999999999


Q ss_pred             CCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEE
Q 017336          159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGV  219 (373)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~  219 (373)
                      ++++++++                         +++.|+|++|++++|+++.+|+.+|+++
T Consensus       158 ~~i~~~~~-------------------------~~i~g~g~~g~~aiq~a~~~g~~~iiaV  193 (194)
T d1f8fa1         158 KDFPFDQL-------------------------VKFYAFDEINQAAIDSRKGITLKPIIKI  193 (194)
T ss_dssp             TTCCGGGG-------------------------EEEEEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred             CCCCcccE-------------------------EEEeCcHHHHHHHHHHHHHcCCCEEEEe
Confidence            99876543                         3456789999999999999999777765

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=100.00  E-value=1.6e-35  Score=252.73  Aligned_cols=190  Identities=37%  Similarity=0.676  Sum_probs=163.1

Q ss_pred             cccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 017336            2 SSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   81 (373)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   81 (373)
                      ++|||++++++++|++++++|+|+|+++||||||.++|||++|++.++|.++ ..+|.++|||++|+|+++|++++.+++
T Consensus         7 ~~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~v~GHE~~G~V~~vG~~V~~~~~   85 (202)
T d1e3ia1           7 IKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKK-ALFPVVLGHECAGIVESVGPGVTNFKP   85 (202)
T ss_dssp             EEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSC-CCSSBCCCCEEEEEEEEECTTCCSCCT
T ss_pred             EEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeecc-cccccccccccceEEeeecCCceeccC
Confidence            4899999999999999999999999999999999999999999999998654 567999999999999999999999999


Q ss_pred             CCEEeecCcCCCCCCccccCCCcCcCccccccCc---ccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336           82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV---RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  158 (373)
Q Consensus        82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~---~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p  158 (373)
                      ||||++.+..+|+.|.+|..|+++.|.+......   .+....++...++.+|....+..+.|+|+||+.+++.+++++|
T Consensus        86 GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~l~~lP  165 (202)
T d1e3ia1          86 GDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVD  165 (202)
T ss_dssp             TCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECC
T ss_pred             CCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhhEEECC
Confidence            9999999999999999999999999987765521   1112233445556666666677778999999999999999999


Q ss_pred             CCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEE
Q 017336          159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF  195 (373)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~  195 (373)
                      ++++++.++++.+++.+++.++.   .+++|++|.|+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~a~~---~~k~G~~V~vi  199 (202)
T d1e3ia1         166 DEFDLDLLVTHALPFESINDAID---LMKEGKSIRTI  199 (202)
T ss_dssp             TTSCGGGGEEEEEEGGGHHHHHH---HHHTTCCSEEE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHH---hCCCCCEEEEE
Confidence            99999988888888888777642   24678888775

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=100.00  E-value=7.5e-36  Score=249.79  Aligned_cols=170  Identities=21%  Similarity=0.375  Sum_probs=150.6

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC---CCCCCccccccceEEEEEeCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |+|+ ++++++ |+++++++|+|+++|||||++++|||++|++.+++...   ..++|+++|||++|+|+++|+++++|+
T Consensus         3 maAV-l~g~~~-l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~   80 (178)
T d1e3ja1           3 LSAV-LYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLK   80 (178)
T ss_dssp             EEEE-EEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCC
T ss_pred             eEEE-EEcCCc-EEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCC
Confidence            4555 577766 99999999999999999999999999999998876432   346789999999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||||++.+..+|+.|+.|+.|.++.|.+..+.   |....                  .|+|+||+.+++++++++|++
T Consensus        81 ~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~---~~~~~------------------~G~~aey~~v~~~~~~~iP~~  139 (178)
T d1e3ja1          81 KGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC---ATPPD------------------DGNLARYYVHAADFCHKLPDN  139 (178)
T ss_dssp             TTCEEEECCEECCSSSHHHHTTCGGGCTTCEET---TBTTB------------------CCSCBSEEEEEGGGEEECCTT
T ss_pred             CCCEEEECcccccCCccccccCCccccccccce---ecccc------------------ccccceeeeecccceeeCCCC
Confidence            999999999999999999999999999876655   32211                  259999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL  197 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~  197 (373)
                      +++++++.+++++.|||+++ +.+++++|++|||+|+
T Consensus       140 ~~~~~aa~~~~~~~ta~~a~-~~~~~~~g~~VlVig~  175 (178)
T d1e3ja1         140 CNVKQLVTHSFKLEQTVDAF-EAARKKADNTIKVMIS  175 (178)
T ss_dssp             CCCGGGEEEEEEGGGHHHHH-HHHHHCCTTCSEEEEE
T ss_pred             CCHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEEcc
Confidence            99999999999999999985 6789999999999974

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=100.00  E-value=5.9e-35  Score=247.62  Aligned_cols=189  Identities=41%  Similarity=0.696  Sum_probs=159.2

Q ss_pred             cccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 017336            2 SSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   81 (373)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   81 (373)
                      .+|||++++++++|++++++++|+|+++||||||.++|||++|++++.|.++ ..+|.++|||++|+|+++|++++.+++
T Consensus         7 ~~~KAav~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~-~~~P~i~GHE~~G~Vv~~G~~v~~~~~   85 (198)
T d1p0fa1           7 ITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIGAGVTCVKP   85 (198)
T ss_dssp             EEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             eEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeeccc-cccccccceeeeeeeeecCcccccCcC
Confidence            4799999999999999999999999999999999999999999999988765 468999999999999999999999999


Q ss_pred             CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336           82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  161 (373)
Q Consensus        82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~  161 (373)
                      ||||++.+..+|+.|.+|++++++.|++.......|.. .++...+..+|..+.+..+.|+|+||+.+++..++++|+++
T Consensus        86 GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip~~~  164 (198)
T d1p0fa1          86 GDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLM-ADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKI  164 (198)
T ss_dssp             TCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTTS
T ss_pred             CCEEEEEeeccccccccccccccccchhhhcccccccc-CCCceeEeeCCeeccccCCCccceeeEEecHHHEEECCCCC
Confidence            99999999999999999999999999987766544433 34445566677777777778999999999999999999999


Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHH
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGL  202 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~  202 (373)
                      +++.++...+...+          +.++++|||.|+|++|+
T Consensus       165 ~~~~~~~~~~~~~~----------v~~~~~vlv~G~G~iGl  195 (198)
T d1p0fa1         165 NVNFLVSTKLTLDQ----------INKAFELLSSGQGVRSI  195 (198)
T ss_dssp             CGGGGEEEEECGGG----------HHHHHHHTTTSSCSEEE
T ss_pred             CHHHHHHhhcchhh----------cCCCCEEEEECCCcceE
Confidence            87766544333222          23345678888887765

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=2.7e-34  Score=238.24  Aligned_cols=166  Identities=27%  Similarity=0.375  Sum_probs=150.3

Q ss_pred             chhhhccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCcccccccccCCC---CCCCCccccccceEEEEEeCCCCCCCC
Q 017336            5 AAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         5 ~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      ||+++.++++||+++++++|++ +++||||||.+++||++|++.+.|.++   ...+|+++|||++|+|+++|+++++++
T Consensus         1 kA~~~~~~g~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~   80 (171)
T d1h2ba1           1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE   80 (171)
T ss_dssp             CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCC
T ss_pred             CEEEEEeCCCCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCC
Confidence            7899999999999999999986 689999999999999999999888653   356899999999999999999999999


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||||++.+...|+.|..|++|.++.|.+..+.   |+.                   ..|+|+||+.+++++++++|++
T Consensus        81 ~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~iP~~  138 (171)
T d1h2ba1          81 KGDPVILHPAVTDGTCLACRAGEDMHCENLEFP---GLN-------------------IDGGFAEFMRTSHRSVIKLPKD  138 (171)
T ss_dssp             TTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCB---TTT-------------------BCCSSBSEEEECGGGEEECCTT
T ss_pred             CCCEEEEcCccCCCCcccccccccccccccccc---eee-------------------cccccceeeeehhhcceecCCC
Confidence            999999999999999999999999999887665   433                   2369999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEE
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAV  194 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI  194 (373)
                      ++++.++++.+++.|||+++ +.+.+ .|++|||
T Consensus       139 ~~~e~aa~~~~~~~ta~~al-~~~~~-~G~~VlI  170 (171)
T d1h2ba1         139 VRVEVDIHKLDEINDVLERL-EKGEV-LGRAVLI  170 (171)
T ss_dssp             CCCCEEEEEGGGHHHHHHHH-HTTCC-SSEEEEE
T ss_pred             CCHHHHHHHHhHHHHHHHHH-HhcCC-CCCEEEe
Confidence            99988888888999999986 56777 8999998

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=100.00  E-value=3.6e-34  Score=243.44  Aligned_cols=189  Identities=44%  Similarity=0.697  Sum_probs=161.7

Q ss_pred             cccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 017336            2 SSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   81 (373)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   81 (373)
                      ++|||++++++++|++++++++|+|+++||||||.++|||++|++.+.|.++ .++|.++|||++|+|+++|++++.+++
T Consensus         7 ~k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~-~~~P~i~GHE~~G~Vv~vG~~v~~~~v   85 (198)
T d2jhfa1           7 IKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV-TPLPVIAGHEAAGIVESIGEGVTTVRP   85 (198)
T ss_dssp             EEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC-CCSSBCCCCSEEEEEEEECTTCCSCCT
T ss_pred             eEEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCcc-cccceecccceeEEEEecCccccCcCC
Confidence            4699999999999999999999999999999999999999999999998665 468999999999999999999999999


Q ss_pred             CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336           82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  161 (373)
Q Consensus        82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~  161 (373)
                      ||||++.+..+|+.|..|+++..+.|.+.......|.. .+....+..+|....++.+.|+|+||+++++.+++++|+.+
T Consensus        86 GdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~p~~~  164 (198)
T d2jhfa1          86 GDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAF  164 (198)
T ss_dssp             TCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTTS
T ss_pred             CCEEEEeeeecccccccccCCccceeccccccccCccc-cCccccccccCceeccCCCCCcccCeEEeCHHHeEECCCCC
Confidence            99999999999999999999999999988877655544 55556677777777777788999999999999999999999


Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEE
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF  195 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~  195 (373)
                      +++.++...+++.+...+   ...+++|++|+|+
T Consensus       165 ~~e~l~~~~~~~~~v~~g---~~~l~~G~~VaVi  195 (198)
T d2jhfa1         165 ALDPLITHVLPFEKINEG---FDLLRSGESIRTI  195 (198)
T ss_dssp             CCGGGEEEEEEGGGHHHH---HHHHHTTCCSEEE
T ss_pred             CHHHHHHHHHHHHhhhhC---CceeeCCCEEEEE
Confidence            887665544444332222   1336788888875

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=4.8e-34  Score=238.15  Aligned_cols=170  Identities=28%  Similarity=0.393  Sum_probs=150.3

Q ss_pred             cccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCCC
Q 017336            2 SSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      .+|||+++.++++|++++++++|.|+++||||||.+++||++|++.++|.++ ...+|.++|||++|+|+++|++++.|+
T Consensus         4 ~tMkA~v~~~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~~v~~~~   83 (175)
T d1llua1           4 QTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVK   83 (175)
T ss_dssp             SEEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             hhcEEEEEEeCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCCCccccc
Confidence            4699999999999999999999999999999999999999999999999775 367899999999999999999999999


Q ss_pred             CCCEEeecCcC-CCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC
Q 017336           81 VGDHVLPVFTG-ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP  159 (373)
Q Consensus        81 ~Gd~V~~~~~~-~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~  159 (373)
                      +||||+..+.. .|+.|..|+.|.++.|.+....   |+.                   ..|+|+||+.+++++++++|+
T Consensus        84 ~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~---G~~-------------------~~gg~aey~~v~~~~~~~iPd  141 (175)
T d1llua1          84 EGDRVGIPWLYTACGCCEHCLTGWETLCESQQNT---GYS-------------------VNGGYAEYVLADPNYVGILPK  141 (175)
T ss_dssp             TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEB---TTT-------------------BCCSSBSEEEECTTTSEECCT
T ss_pred             cCCEEEeccccccCCccccccCCccccccccccc---ccc-------------------cccccceEEEechHHEEECCC
Confidence            99999876544 7999999999999999886655   432                   235899999999999999999


Q ss_pred             CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEE
Q 017336          160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF  195 (373)
Q Consensus       160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~  195 (373)
                      +++++.++++.+++.|+++.+ + +...+|++|||+
T Consensus       142 ~l~~~~a~~~~~~~~t~~~~~-~-~g~~~G~~VLVl  175 (175)
T d1llua1         142 NVKATIHPGKLDDINQILDQM-R-AGQIEGRIVLEM  175 (175)
T ss_dssp             TCCCCEEEECGGGHHHHHHHH-H-TTCCSSEEEEEC
T ss_pred             CCChhHHHHHHhHHHHHHHHH-H-hCCCCCCEEEeC
Confidence            999988888888888888864 3 444579999984

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-34  Score=240.72  Aligned_cols=171  Identities=19%  Similarity=0.281  Sum_probs=148.2

Q ss_pred             cccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCC---CCCCCCccccccceEEEEEeCCCCCC
Q 017336            2 SSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGVVESVGEGVSD   78 (373)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~~~~p~i~G~e~~G~V~~vG~~v~~   78 (373)
                      ..+.|+++..+++ ++++++++|+|+++||||||.+++||++|++.+++..   ...++|.++|||++|+|+++|+++++
T Consensus         6 p~~~a~V~~gp~~-l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~   84 (185)
T d1pl8a1           6 PNNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKH   84 (185)
T ss_dssp             CCCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCS
T ss_pred             CCCEEEEEeCCCe-EEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceee
Confidence            3578999999877 9999999999999999999999999999999987643   23567899999999999999999999


Q ss_pred             CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336           79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  158 (373)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p  158 (373)
                      |++||||++.+..+|+.|++|+.|+++.|.+..+.   |....                  .|+|+||+++++++++++|
T Consensus        85 ~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~---g~~~~------------------~G~~aey~~~~~~~~~~lP  143 (185)
T d1pl8a1          85 LKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFC---ATPPD------------------DGNLCRFYKHNAAFCYKLP  143 (185)
T ss_dssp             CCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEET---TBTTB------------------CCSCBSEEEEEGGGEEECC
T ss_pred             ecccccceecceeccccchhhccchhchhccceee---ecccc------------------cccceEEEEEchHHEEECC
Confidence            99999999999999999999999999999987766   43222                  2589999999999999999


Q ss_pred             CCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCC
Q 017336          159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLG  198 (373)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g  198 (373)
                      +++++++++.++  +.+|+++ ++..++++|++||| |+|
T Consensus       144 ~~~~~~~aa~~p--l~~a~~a-~~~~~~~~G~~VlI-g~G  179 (185)
T d1pl8a1         144 DNVKPLVTHRFP--LEKALEA-FETFKKGLGLKIML-KCD  179 (185)
T ss_dssp             TTCGGGEEEEEE--GGGHHHH-HHHHHTTCCSEEEE-ECC
T ss_pred             CCCCHHHHHHHH--HHHHHHH-HHHhCCCCCCEEEE-EeC
Confidence            999999887654  4567776 45678899999998 554

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.9e-33  Score=234.54  Aligned_cols=172  Identities=20%  Similarity=0.317  Sum_probs=145.1

Q ss_pred             ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCC-----
Q 017336            3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVS-----   77 (373)
Q Consensus         3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~-----   77 (373)
                      +|||+++.+++++++++++++|+|+++||||||.++|||++|+++++|.++..++|+++|||++|+|+++|++++     
T Consensus         4 k~kA~v~~~~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~~~P~vlGHE~~G~V~~vG~~v~~~~~~   83 (184)
T d1vj0a1           4 KAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLNGE   83 (184)
T ss_dssp             EEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEESSCCBCTTSC
T ss_pred             eEEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCccccccccceeeeeeeeEEeccccccccc
Confidence            489999999999999999999999999999999999999999999999888778999999999999999999986     


Q ss_pred             CCCCCCEEeecCcCCCCCCccccCCCc-CcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEe-cCceE
Q 017336           78 DLEVGDHVLPVFTGECGDCRHCRSDVS-NMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVH-SGCVA  155 (373)
Q Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~-~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~-~~~~~  155 (373)
                      .+++||+|++.+..+|++|.+|+.|.+ +.|.+....   |+.  .+...+         ..-.|+|+||+.++ +.+++
T Consensus        84 ~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~---G~~--~~~~~~---------~~~~Gg~ae~~~v~~~~~v~  149 (184)
T d1vj0a1          84 LLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVY---GIN--RGCSEY---------PHLRGCYSSHIVLDPETDVL  149 (184)
T ss_dssp             BCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEET---TTT--CCSSST---------TCCCSSSBSEEEECTTCCEE
T ss_pred             cccceeeeEeccccccccChhHhCccccccCCCceee---ccC--CCCCCC---------CCcceeCcCcEEechhHcEE
Confidence            468999999999999999999999996 458876654   321  000000         11246999999996 57999


Q ss_pred             eCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEE
Q 017336          156 KINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF  195 (373)
Q Consensus       156 ~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~  195 (373)
                      ++|+++++++      ++++|++++ +++.+++|++|||+
T Consensus       150 ~ip~~l~~~~------pl~~A~~a~-~~~~~~~G~~VlI~  182 (184)
T d1vj0a1         150 KVSEKITHRL------PLKEANKAL-ELMESREALKVILY  182 (184)
T ss_dssp             EECTTCCEEE------EGGGHHHHH-HHHHHTSCSCEEEE
T ss_pred             ECCCCCCHHH------HHHHHHHHH-HHhCCCcCCEEEEe
Confidence            9999998653      456778774 67899999999997

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=100.00  E-value=3.3e-35  Score=244.18  Aligned_cols=170  Identities=18%  Similarity=0.122  Sum_probs=140.7

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   83 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   83 (373)
                      |||+++.++++ ++++++|.|.|+++|||||++++|||++|++.+.+......+|+++|||++|+|+++|+++++|++||
T Consensus         1 MKa~v~~~~~~-l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~~~P~i~GhE~~G~V~~vG~~v~~~~vGd   79 (177)
T d1jqba1           1 MKGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGD   79 (177)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTCCCSSEECCCCEEEEEEEECTTCCSCCTTC
T ss_pred             CeEEEEEeCCC-eEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCCCCCCccCcceeeEEeeecccccceecCCC
Confidence            89999999988 99999999999999999999999999999988876666677899999999999999999999999999


Q ss_pred             EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEec--CceEeCCCCC
Q 017336           84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS--GCVAKINPLA  161 (373)
Q Consensus        84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~--~~~~~~p~~~  161 (373)
                      ||++.+..+|+.|..|+.+.++.|.+.......|..                   ..|+|+||+++|.  .+++++|+++
T Consensus        80 rV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~-------------------~~G~~aEy~~vp~a~~~l~~iP~~~  140 (177)
T d1jqba1          80 RVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNF-------------------KDGVFGEYFHVNDADMNLAILPKDV  140 (177)
T ss_dssp             EEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTT-------------------BCCSSBSSEEESSHHHHCEECCTTS
T ss_pred             cEEEeeeeccccccchhhhhhcccccccccccccCC-------------------CChhcCeeEEEEhhhCeEEECCCCc
Confidence            999999999999999999999999876544222211                   2369999999985  4799999999


Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHH
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAA  204 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~a  204 (373)
                      ++++++...   .+++..+        ++.+||+|+|++|+.+
T Consensus       141 ~~~~~~~~~---~~~~~~~--------~~~vlv~g~gp~gl~a  172 (177)
T d1jqba1         141 DLSKLVTHV---YHGFDHI--------EEALLLMKDKPKDLIK  172 (177)
T ss_dssp             CGGGGEEEE---EESGGGH--------HHHHHHHHHCCTTCSE
T ss_pred             chHHHHHHH---HHHHHHh--------cCceEEECCCHHHhhe
Confidence            987765433   2233322        2447777777776654

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.98  E-value=2.6e-35  Score=249.80  Aligned_cols=191  Identities=20%  Similarity=0.229  Sum_probs=156.5

Q ss_pred             cchhhhccCCCCeEEEEeecCCC-------CCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPP-------QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV   76 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~-------~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v   76 (373)
                      +||+++++++. +++++++.|++       +++||+|||.+++||++|+++++|.++ ..+|+++|||++|+|+++|++|
T Consensus         2 ~kA~v~~~~~~-le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~-~~~P~v~GHE~~G~Vv~vG~~V   79 (201)
T d1kola1           2 NRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGRDV   79 (201)
T ss_dssp             EEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECTTC
T ss_pred             cEEEEEeCCCc-eEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcc-cccceeccceeeeeeecccccc
Confidence            68999999987 99999999965       469999999999999999999998765 4689999999999999999999


Q ss_pred             CCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEec--Cce
Q 017336           77 SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS--GCV  154 (373)
Q Consensus        77 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~--~~~  154 (373)
                      +.|++||||++.+..+|+.|+.|++++++.|.+.......|.....      ..      ....|+|+||+++|.  .++
T Consensus        80 ~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~------~~------~~~~Gg~aeyv~vp~~~~~l  147 (201)
T d1kola1          80 ENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYV------DM------GDWTGGQAEYVLVPYADFNL  147 (201)
T ss_dssp             CSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCT------TS------CCBCCCSBSEEEESSHHHHC
T ss_pred             ccccccceeEEeeeeeccCChhhhCCCccccccccccccccccccc------CC------CccccccccEEEeehHHCeE
Confidence            9999999999999999999999999999999776544333322100      00      112479999999975  379


Q ss_pred             EeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Q 017336          155 AKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA  213 (373)
Q Consensus       155 ~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~  213 (373)
                      +++|++.++.+++++...+.++++++ +.+..+.+    ++|+|++|++++|+||.+|+
T Consensus       148 ~~iPd~~~~~~~~~~~~~~~~~~~a~-~~~~~~~g----~~g~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         148 LKLPDRDKAMEKINIAEVVGVQVISL-DDAPRGYG----EFDAGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             EECSCHHHHHHTCCHHHHHTEEEECG-GGHHHHHH----HHHHTCSCEEEECTTCSSCC
T ss_pred             EECCCCCChHHHHHHHHHHHHHHHHH-HhCCCCCe----EEeeCHHHHHHHHHHHHcCC
Confidence            99999877777777777888888874 34444333    35889999999999999885

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.98  E-value=9.9e-33  Score=230.55  Aligned_cols=167  Identities=26%  Similarity=0.392  Sum_probs=142.7

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC--------CCCCCccccccceEEEEEeCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ--------TPLFPRIFGHEAAGVVESVGEG   75 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--------~~~~p~i~G~e~~G~V~~vG~~   75 (373)
                      |||+++.++|+||+++++++|+|+++||||||.++|||++|+++++|.++        ..++|+|+|||++|+|+++|+.
T Consensus         1 MKA~~~~~~G~pl~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~   80 (177)
T d1jvba1           1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (177)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEEeCCCCCEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccC
Confidence            89999999999999999999999999999999999999999999988542        3468999999999999999999


Q ss_pred             CCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC-ce
Q 017336           76 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG-CV  154 (373)
Q Consensus        76 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~-~~  154 (373)
                      +++|++||||++.+..+|+.|..|+.++++.|++..+.   |+.                   ..|+|+||+.+++. .+
T Consensus        81 v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~---g~~-------------------~~G~~aey~~vp~~~~~  138 (177)
T d1jvba1          81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL---GIN-------------------FDGAYAEYVIVPHYKYM  138 (177)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEB---TTT-------------------BCCSSBSEEEESCGGGE
T ss_pred             ccccccCceEeeeeccccccccccccccccccCCccee---eec-------------------cccccccEEEEEhHHeE
Confidence            99999999999999999999999999999999987655   432                   23699999999754 56


Q ss_pred             EeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEE
Q 017336          155 AKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAV  194 (373)
Q Consensus       155 ~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI  194 (373)
                      +++|+..+.+.++.+..++.+|++++ ...++ .|++|||
T Consensus       139 ~~~~~~~~~~~a~~~~~~~~~a~~~~-~~~~~-~G~~VlI  176 (177)
T d1jvba1         139 YKLRRVKPMITKTMKLEEANEAIDNL-ENFKA-IGRQVLI  176 (177)
T ss_dssp             EECSSSCCCCEEEEEGGGHHHHHHHH-HTTCC-CSEEEEE
T ss_pred             EECCCCChHHHHHHHHHHHHHHHHHH-Hhhcc-cCCceEC
Confidence            67776666555555556888888875 55665 5889987

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=2.2e-32  Score=230.05  Aligned_cols=177  Identities=17%  Similarity=0.232  Sum_probs=147.5

Q ss_pred             ccchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCC-CCC
Q 017336            3 STAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV-SDL   79 (373)
Q Consensus         3 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v-~~~   79 (373)
                      +|||+++..++..  +++.+.+.++++|+||||||.++|||++|++.+.|.++...+|+++|||++|+|+++|+++ +.+
T Consensus         6 ~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~~~P~i~GHE~~G~Vv~vG~~v~~~~   85 (192)
T d1piwa1           6 KFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGL   85 (192)
T ss_dssp             CEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTCCSSC
T ss_pred             eeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCCCCCCcCcccccccchhhccccccccc
Confidence            5899999887764  6777887777899999999999999999999999988888899999999999999999998 569


Q ss_pred             CCCCEEeecCc-CCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336           80 EVGDHVLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  158 (373)
Q Consensus        80 ~~Gd~V~~~~~-~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p  158 (373)
                      ++||||.+.+. ..|+.|.+|+.++++.|++........               ........|+|+||+++++++++++|
T Consensus        86 k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~---------------~~~G~~~~Ggfaey~~v~~~~~~~iP  150 (192)
T d1piwa1          86 KVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQP---------------YEDGYVSQGGYANYVRVHEHFVVPIP  150 (192)
T ss_dssp             CTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCB---------------CTTSCBCCCSSBSEEEEEGGGEEECC
T ss_pred             CCCCeeeEeeeccCCCCchhhhcCCcccccccccccccc---------------cccccccccceeeEEEeehHHeEECC
Confidence            99999977654 479999999999999998765331100               00012234799999999999999999


Q ss_pred             CCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEE
Q 017336          159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF  195 (373)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~  195 (373)
                      ++++++.|+.+...+.|||+++ ++++++++++|||.
T Consensus       151 ~~l~~e~Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~  186 (192)
T d1piwa1         151 ENIWVETLPVGEAGVHEAFERM-EKGDVRYRFTLVGY  186 (192)
T ss_dssp             TTCCEEEEESSHHHHHHHHHHH-HHTCCSSEEEEECC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEE
Confidence            9999988776665577999975 67999999999975

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.97  E-value=3.9e-32  Score=225.76  Aligned_cols=168  Identities=30%  Similarity=0.416  Sum_probs=142.8

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCC-CCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-QTPLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      |||++++++++|+++++++.|+|+++||||||+++|||++|++.+++.+ ....+|.++|||++|+|+++|+.++.+++|
T Consensus         1 MkA~v~~~~g~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~vG   80 (171)
T d1rjwa1           1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG   80 (171)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEecCCCCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCceee
Confidence            8999999999999999999999999999999999999999999887643 456789999999999999999999999999


Q ss_pred             CEEeecCcC-CCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336           83 DHVLPVFTG-ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  161 (373)
Q Consensus        83 d~V~~~~~~-~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~  161 (373)
                      |||++.+.. .|+.|..|..+.++.|.+....   |+.                   ..|+|+||+++++++++++|+++
T Consensus        81 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~iP~~~  138 (171)
T d1rjwa1          81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKNA---GYS-------------------VDGGYAEYCRAAADYVVKIPDNT  138 (171)
T ss_dssp             CEEEECSEEECCSCSHHHHTTCGGGCTTCEEB---TTT-------------------BCCSSBSEEEEEGGGCEECCTTC
T ss_pred             eEEeeccccccccccccccCCCcccccccccc---cee-------------------ccCccccceEecHHHEEECCCCC
Confidence            999876554 5788999999999999887655   432                   23699999999999999999999


Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL  197 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~  197 (373)
                      +++.|+ +. .+.++++.+. .+.+ +|++|||+|.
T Consensus       139 ~~e~A~-l~-~~~~~~~~~~-~~~~-~G~tVlViG~  170 (171)
T d1rjwa1         139 IIEVQP-LE-KINEVFDRML-KGQI-NGRVVLTLED  170 (171)
T ss_dssp             CEEEEE-GG-GHHHHHHHHH-TTCC-SSEEEEECCC
T ss_pred             CHHHHH-HH-HHHHHHHHHH-hcCC-CCCEEEEeCC
Confidence            986654 43 4566776643 3555 5999999984

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=9.2e-32  Score=223.79  Aligned_cols=165  Identities=24%  Similarity=0.336  Sum_probs=133.8

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   83 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   83 (373)
                      |||++.+++++||++++++.|+|+++||||||.++|||++|++.+.|.++...+|+++|||++|+|+++|++|+++++||
T Consensus         1 m~a~~~~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~~~P~i~GhE~~G~V~~vG~~V~~~~vGd   80 (179)
T d1uufa1           1 IKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGD   80 (179)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCCTTC
T ss_pred             CeEEEEccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeeccccccccccccccccchhhccccccCCCCC
Confidence            79999999999999999999999999999999999999999999999888788999999999999999999999999999


Q ss_pred             EEeecC-cCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336           84 HVLPVF-TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  162 (373)
Q Consensus        84 ~V~~~~-~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~  162 (373)
                      ||.+.+ ...|+.|++|++|+++.|++.... +.+.....             .....|+|+||+.+++++++++|+...
T Consensus        81 rV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~-------------~~~~~GgfaEy~~v~~~~~~~ip~~~~  146 (179)
T d1uufa1          81 LVGVGCIVDSCKHCEECEDGLENYCDHMTGT-YNSPTPDE-------------PGHTLGGYSQQIVVHERYVLRIRVADI  146 (179)
T ss_dssp             EEEECSEEECCSSSHHHHTTCGGGCTTCEET-TTSBCSST-------------TSBCCCSSBSEEEEEGGGCEECCCCCE
T ss_pred             EEEEcccccccCccccccCcccccCCCcccc-ccccCCCC-------------CcccccccceEEEechHHEEECCCCCc
Confidence            998765 458999999999999999986533 11211000             011237999999999999999996653


Q ss_pred             chhhhhcccchhhhhhhhhhccCC
Q 017336          163 LDKVCILSCGVSTGLGATLNVAKP  186 (373)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~  186 (373)
                      ....+   .++.++++++. ++.+
T Consensus       147 ~~~~a---~~l~~a~~a~~-~a~v  166 (179)
T d1uufa1         147 EMIRA---DQINEAYERML-RGDV  166 (179)
T ss_dssp             EEECG---GGHHHHHHHHH-TTCS
T ss_pred             ChhHh---chhHHHHHHHH-HhCc
Confidence            32222   24566777643 3444

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.6e-30  Score=206.79  Aligned_cols=145  Identities=22%  Similarity=0.313  Sum_probs=130.7

Q ss_pred             ccchhhhccCCCC--eEEE-EeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCC
Q 017336            3 STAAAVAWEAGKP--LIIQ-DVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSD   78 (373)
Q Consensus         3 ~~~a~~~~~~~~~--~~~~-~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~   78 (373)
                      .|||+++.++|+|  +++. +++.|+|+++||||||.++++|++|++.++|.++. ..+|.++|||++|+|+++|+++++
T Consensus         2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (150)
T d1yb5a1           2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA   81 (150)
T ss_dssp             EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTT
T ss_pred             ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceeec
Confidence            4899999998887  7764 68999999999999999999999999999887654 568899999999999999999999


Q ss_pred             CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336           79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  158 (373)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p  158 (373)
                      |++||||+....                                                ..|+|+||+.++++.++++|
T Consensus        82 ~~vGdrV~~~~~------------------------------------------------~~G~~ae~~~v~~~~~~~iP  113 (150)
T d1yb5a1          82 FKKGDRVFTSST------------------------------------------------ISGGYAEYALAADHTVYKLP  113 (150)
T ss_dssp             CCTTCEEEESCC------------------------------------------------SSCSSBSEEEEEGGGEEECC
T ss_pred             cccCcccccccc------------------------------------------------cccccccccccccccccccc
Confidence            999999985421                                                13699999999999999999


Q ss_pred             CCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEE
Q 017336          159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF  195 (373)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~  195 (373)
                      +++++++||+++++..|+|+++...+....|+++||+
T Consensus       114 ~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1         114 EKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             TTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             CCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence            9999999999999999999998888899999999984

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.96  E-value=1.5e-28  Score=204.45  Aligned_cols=173  Identities=32%  Similarity=0.515  Sum_probs=155.0

Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      +|++.|++++|++.|||+++.+.++++++++|||+|+|++|++++|+|+.+|+++|++++++++|++.++++|+++++++
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~   80 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS   80 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence            46788999999999999998899999999999999999999999999999999888899999999999999999999998


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc-ccceEEEEeccCC
Q 017336          241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNY  319 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~  319 (373)
                      ++++  +.+.+++++++++|+||||+|++..++.++++++++ |+++++|.........++...+. +++++.|+..+.+
T Consensus        81 ~~~~--~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g~~  157 (174)
T d1f8fa2          81 KTQD--PVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSG  157 (174)
T ss_dssp             TTSC--HHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGS
T ss_pred             CCcC--HHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCc-eEEEEEeecCCCcccccCHHHHHHCCCEEEEEEecCC
Confidence            8766  999999999889999999999988999999999997 99999998655555566655544 9999999988777


Q ss_pred             CCCCCHHHHHHHHHcCC
Q 017336          320 KPRTDLPSVVDMYMNKQ  336 (373)
Q Consensus       320 ~~~~~~~~~~~~l~~~~  336 (373)
                      ..+++++++++++++|+
T Consensus       158 ~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         158 SPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             ChHHHHHHHHHHHHcCC
Confidence            66677899999999885

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=4.1e-28  Score=195.79  Aligned_cols=140  Identities=22%  Similarity=0.294  Sum_probs=121.9

Q ss_pred             hhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336            6 AAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   83 (373)
Q Consensus         6 a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   83 (373)
                      .+.|.++|+|  |++++.+.|+|+++||+|||.++++|++|++.++|.++...+|.++|||++|+|+++|+++++|++||
T Consensus         3 ~i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd   82 (147)
T d1qora1           3 RIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAGD   82 (147)
T ss_dssp             EEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCTTC
T ss_pred             EEEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCCCcceeeeccccccceeeeeeecccccccc
Confidence            4677888887  89999999999999999999999999999999999888888999999999999999999999999999


Q ss_pred             EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336           84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  163 (373)
Q Consensus        84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~  163 (373)
                      ||+...                                                .+.|+|+||+.++++.++++|+++++
T Consensus        83 rV~~~~------------------------------------------------~~~G~~ae~~~v~~~~~~~~P~~~~~  114 (147)
T d1qora1          83 RVVYAQ------------------------------------------------SALGAYSSVHNIIADKAAILPAAIKV  114 (147)
T ss_dssp             EEEESC------------------------------------------------CSSCCSBSEEEEEGGGEEECCTTSCC
T ss_pred             eeeeec------------------------------------------------cccccceeEEEEehHHeEEcCcccch
Confidence            997331                                                12369999999999999999999988


Q ss_pred             hhh--hhcccchhhhhhhhhhccCCCCCCEEEE
Q 017336          164 DKV--CILSCGVSTGLGATLNVAKPERGSSVAV  194 (373)
Q Consensus       164 ~~a--a~~~~~~~ta~~~l~~~~~~~~~~~vlI  194 (373)
                      +.+  +++++...++++++.+ .++++|++|||
T Consensus       115 ~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI  146 (147)
T d1qora1         115 DVAEQQKYPLKDAQRAHEILE-SRATQGSSLLI  146 (147)
T ss_dssp             CCCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence            755  4456666777777654 68999999998

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.95  E-value=1.9e-27  Score=197.24  Aligned_cols=173  Identities=44%  Similarity=0.775  Sum_probs=150.0

Q ss_pred             chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336          163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  242 (373)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~  242 (373)
                      +.+||++.|++.|||+++.+.++++++++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++|+.+
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~   81 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKD   81 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCC
Confidence            46799999999999999888899999999999999999999999999999989999999999999999999999999876


Q ss_pred             CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCCC
Q 017336          243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR  322 (373)
Q Consensus       243 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  322 (373)
                      .+....+..+..+++++|++||++|++..++.++..+.+++|+++++|.......+++++..+.++++|.|+.++++.. 
T Consensus        82 ~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~-  160 (174)
T d1p0fa2          82 YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKG-  160 (174)
T ss_dssp             CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGGCCG-
T ss_pred             chhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeCCCCH-
Confidence            5544555556666669999999999988899999988774499999998776777777766666888999998877643 


Q ss_pred             CCHHHHHHHHHcCC
Q 017336          323 TDLPSVVDMYMNKQ  336 (373)
Q Consensus       323 ~~~~~~~~~l~~~~  336 (373)
                      +++.++++++++||
T Consensus       161 ~d~~~lidl~~~gK  174 (174)
T d1p0fa2         161 EEVSRLVDDYMKKK  174 (174)
T ss_dssp             GGHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHcCC
Confidence            47999999999885

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=7.5e-29  Score=201.19  Aligned_cols=149  Identities=19%  Similarity=0.178  Sum_probs=127.6

Q ss_pred             CcccchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCC
Q 017336            1 MSSTAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVS   77 (373)
Q Consensus         1 m~~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~   77 (373)
                      |++|||+++.+++++  ++++++++|+|++|||||||.++|||++|++.+.|.++ ....|+++|+|++|+|++  +.++
T Consensus         1 m~~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~~   78 (152)
T d1xa0a1           1 MSAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHP   78 (152)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCSS
T ss_pred             CCceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCCC
Confidence            999999999999987  56889999999999999999999999999998888765 356899999999999998  5667


Q ss_pred             CCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeC
Q 017336           78 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI  157 (373)
Q Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~  157 (373)
                      .|++||+|.......                        +                   ....|+|+||+.+++++++++
T Consensus        79 ~~~~g~~v~~~~~~~------------------------~-------------------~~~~G~~aEy~~v~~~~~~~i  115 (152)
T d1xa0a1          79 RFREGDEVIATGYEI------------------------G-------------------VTHFGGYSEYARLHGEWLVPL  115 (152)
T ss_dssp             SCCTTCEEEEESTTB------------------------T-------------------TTBCCSSBSEEEECGGGCEEC
T ss_pred             ccccCCEEEEecCcc------------------------c-------------------cccCCCcceeeeehhhccccC
Confidence            899999998542100                        0                   112369999999999999999


Q ss_pred             CCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEEC
Q 017336          158 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG  196 (373)
Q Consensus       158 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G  196 (373)
                      |++++ .+||+++++.+|||.++....+++ |++|||+|
T Consensus       116 P~~l~-~~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1         116 PKGLE-RIAQEISLAELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             CTTHH-HHEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             CCCCC-HHHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence            99997 578889989999998888888886 99999975

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.95  E-value=3.6e-27  Score=195.28  Aligned_cols=173  Identities=44%  Similarity=0.841  Sum_probs=147.2

Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  241 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~  241 (373)
                      +++.||.++|++.|+|+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++.+++|+++++++|++.++++.
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~   81 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR   81 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCc
Confidence            57889999999999999988889999999999999999999999999999998999999999999999999999999876


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCC
Q 017336          242 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP  321 (373)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  321 (373)
                      ..+.......+...++++|++|||+|++..++.+++++++++|+++++|......  .++...+..+.+|.|+..+++.+
T Consensus        82 ~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~~--~i~~~~~~~~k~i~Gs~~Gs~~~  159 (174)
T d1e3ia2          82 ELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEM--TIPTVDVILGRSINGTFFGGWKS  159 (174)
T ss_dssp             GCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEE--EEEHHHHHTTCEEEECSGGGCCH
T ss_pred             cchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCcc--ccchHHHhccCEEEEEEeeCCCh
Confidence            5443355555555556999999999999999999999999449999999865433  34444444567899998888777


Q ss_pred             CCCHHHHHHHHHcCC
Q 017336          322 RTDLPSVVDMYMNKQ  336 (373)
Q Consensus       322 ~~~~~~~~~~l~~~~  336 (373)
                      .+++.++++++++||
T Consensus       160 ~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         160 VDSVPNLVSDYKNKK  174 (174)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHCcC
Confidence            778888999988875

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=5.6e-28  Score=189.98  Aligned_cols=130  Identities=21%  Similarity=0.189  Sum_probs=117.3

Q ss_pred             cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCCCC
Q 017336            4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVG   82 (373)
Q Consensus         4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G   82 (373)
                      |||+++.++|+++++++++.|.|+++||+||++++|||++|++.++|.++. ..+|+++|||++|+|           +|
T Consensus         1 MkA~~~~~~G~~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V-----------vG   69 (131)
T d1iz0a1           1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV-----------EG   69 (131)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE-----------TT
T ss_pred             CcEEEEccCCCCCEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee-----------cc
Confidence            899999999999999999999999999999999999999999999997754 578999999999999           39


Q ss_pred             CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336           83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  162 (373)
Q Consensus        83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~  162 (373)
                      |+|+...                                                 ..|+|+||+.++++.++++|++++
T Consensus        70 d~V~~~~-------------------------------------------------~~G~~aey~~v~~~~~~~~P~~~~  100 (131)
T d1iz0a1          70 RRYAALV-------------------------------------------------PQGGLAERVAVPKGALLPLPEGRP  100 (131)
T ss_dssp             EEEEEEC-------------------------------------------------SSCCSBSEEEEEGGGCEECCTTCC
T ss_pred             ceEEEEe-------------------------------------------------ccCccceeeeeCHHHeEEccCCCC
Confidence            9998542                                                 126999999999999999999999


Q ss_pred             chhhhhcccchhhhhhhhhhccCCCCCCEEEEE
Q 017336          163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVF  195 (373)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~  195 (373)
                      +++||++++++.|||+++.++++  .+++||++
T Consensus       101 ~~~aa~~~~~~~Ta~~al~~~g~--~g~tvl~l  131 (131)
T d1iz0a1         101 VVGPVFPFAEAEAAFRALLDRGH--TGKVVVRL  131 (131)
T ss_dssp             CEEEEEEGGGHHHHHHHTTCTTC--CBEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHhccc--CCCEEEEC
Confidence            99999999999999999877664  58998873

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.94  E-value=1.3e-26  Score=193.09  Aligned_cols=174  Identities=49%  Similarity=0.824  Sum_probs=147.2

Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  241 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~  241 (373)
                      |+++||.++|++.|+|+++.+.+++++|++|||+|+|++|++++|+++.+|+.+|++++++++|+++++++|+++++++.
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~   81 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence            57889999999999999988889999999999999999999999999999988999999999999999999999999887


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCC-CceeeccchhhcccceEEEEeccCCC
Q 017336          242 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK-DAVFMTKPINVLNERTLKGTFFGNYK  320 (373)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~  320 (373)
                      +......+.+++.+++++|+|||++|++..++.+..+++++ +.++.++.... ..........+.++++|.|+.+++..
T Consensus        82 ~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g-~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  160 (176)
T d2fzwa2          82 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG-WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWK  160 (176)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTT-TCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             chhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCC-ceeEEEEeeccccccccccHHHHHCCCEEEEEeeeCCc
Confidence            65444666677777779999999999988889999999986 77776654432 33333344445688999999988877


Q ss_pred             CCCCHHHHHHHHHcCC
Q 017336          321 PRTDLPSVVDMYMNKQ  336 (373)
Q Consensus       321 ~~~~~~~~~~~l~~~~  336 (373)
                      ..+++.++++++++||
T Consensus       161 ~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         161 SVESVPKLVSEYMSKK  176 (176)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            6778889999998885

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.94  E-value=1.8e-26  Score=191.21  Aligned_cols=170  Identities=30%  Similarity=0.506  Sum_probs=145.9

Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      +|+++|+.+++++.|||+++ +.++++++++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|+++++++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~   79 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNY   79 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECG
T ss_pred             CCHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccccc
Confidence            57899999999999999985 67999999999999999999999999999999889999999999999999999999998


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh---hcccceEEEEec
Q 017336          241 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN---VLNERTLKGTFF  316 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~---~~~~~~i~g~~~  316 (373)
                      ++.+  +.+.+.+.+++ ++|+||||+|++..++.++++++++ |+++.+|.......+.+....   ..+++++.++..
T Consensus        80 ~~~~--~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~  156 (174)
T d1jqba2          80 KNGH--IEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLC  156 (174)
T ss_dssp             GGSC--HHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBCC
T ss_pred             cchh--HHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcC-CEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEecC
Confidence            8766  88999999988 8999999999988899999999997 999999987655555544433   237788888865


Q ss_pred             cCCCCCCCHHHHHHHHHcCC
Q 017336          317 GNYKPRTDLPSVVDMYMNKQ  336 (373)
Q Consensus       317 ~~~~~~~~~~~~~~~l~~~~  336 (373)
                      +..+  ..++.+++++..|+
T Consensus       157 ~~~r--~~~e~l~~li~~gk  174 (174)
T d1jqba2         157 PGGR--LRAERLRDMVVYNR  174 (174)
T ss_dssp             CCHH--HHHHHHHHHHHTTS
T ss_pred             CCCc--ccHHHHHHHHHcCC
Confidence            4432  23667778887764

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.7e-26  Score=191.95  Aligned_cols=166  Identities=21%  Similarity=0.293  Sum_probs=142.3

Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      +|+++||+++++++|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++.++|
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCc-ccccccccccccccccccCcccccc
Confidence            5789999999999999999988899999999999997 9999999999999999 7998888999999999999999999


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEecc
Q 017336          240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFG  317 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~  317 (373)
                      +++.+  +.+.+++.+++ ++|++||++|+ ..++.++++++++ |+++.+|... .  .++++.. +.+++++.|+.++
T Consensus        80 ~~~~~--~~~~i~~~t~~~g~d~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~-~--~~~~~~~~~~k~~~i~g~~~~  152 (174)
T d1yb5a2          80 HREVN--YIDKIKKYVGEKGIDIIIEMLAN-VNLSKDLSLLSHG-GRVIVVGSRG-T--IEINPRDTMAKESSIIGVTLF  152 (174)
T ss_dssp             TTSTT--HHHHHHHHHCTTCEEEEEESCHH-HHHHHHHHHEEEE-EEEEECCCCS-C--EEECTHHHHTTTCEEEECCGG
T ss_pred             ccccc--HHHHhhhhhccCCceEEeecccH-HHHHHHHhccCCC-CEEEEEecCC-C--CCCCHHHHHHCCCEEEEEEec
Confidence            88776  99999999988 89999999997 7899999999997 9999998754 3  3344433 4489999998765


Q ss_pred             CCCCCCCHHHHHHHHHcC
Q 017336          318 NYKPRTDLPSVVDMYMNK  335 (373)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~  335 (373)
                      ... .+++++++++++++
T Consensus       153 ~~~-~~~~~~~~~~l~~g  169 (174)
T d1yb5a2         153 SST-KEEFQQYAAALQAG  169 (174)
T ss_dssp             GCC-HHHHHHHHHHHHHH
T ss_pred             CCC-HHHHHHHHHHHHHH
Confidence            432 34567777766654

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.94  E-value=7.9e-26  Score=188.27  Aligned_cols=175  Identities=46%  Similarity=0.873  Sum_probs=145.4

Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  241 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~  241 (373)
                      |+++||.++|++.|||+++.+.+++++|++|||+|+|++|++++|+++.+|+.+|++++++++|+++++++|+++++++.
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~   81 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence            67889999999999999998999999999999999999999999999999988999999999999999999999998876


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCC
Q 017336          242 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP  321 (373)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  321 (373)
                      +.+....+.++...++++|++||++|.+..++.++..++++++.++..+..............+.+++++.|+.+++..+
T Consensus        82 ~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~  161 (176)
T d2jhfa2          82 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKS  161 (176)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCCH
T ss_pred             CchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeCCCH
Confidence            54433555555555569999999999988899999999996345555544443444444445566999999998887777


Q ss_pred             CCCHHHHHHHHHcCC
Q 017336          322 RTDLPSVVDMYMNKQ  336 (373)
Q Consensus       322 ~~~~~~~~~~l~~~~  336 (373)
                      ++++.++++++++||
T Consensus       162 ~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         162 KDSVPKLVADFMAKK  176 (176)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHCcC
Confidence            778889999998875

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.93  E-value=4.8e-26  Score=189.03  Aligned_cols=172  Identities=37%  Similarity=0.701  Sum_probs=146.9

Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  241 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~  241 (373)
                      |++.||.++|++.|+|+++.+.++++++++|+|+|+|++|++++|+++.+|+.+|++++.+++|+++++++|+++++|+.
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~   82 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPK   82 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECcc
Confidence            58899999999999999988889999999999999999999999999999988999999999999999999999999877


Q ss_pred             CCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCC
Q 017336          242 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK  320 (373)
Q Consensus       242 ~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  320 (373)
                      +.+. +.+.+.+.+.+ |+|++||++|++..+..++..+.+++|+++.+|.......+.+++..+.++.+++|+.+++..
T Consensus        83 ~~~~-~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  161 (176)
T d1d1ta2          83 DSTK-PISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLK  161 (176)
T ss_dssp             GCSS-CHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             ccch-HHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEEEeCCC
Confidence            6543 34445555555 999999999998888888887866459999999887666677766666688899999888776


Q ss_pred             CCCCHHHHHHHHHc
Q 017336          321 PRTDLPSVVDMYMN  334 (373)
Q Consensus       321 ~~~~~~~~~~~l~~  334 (373)
                      +++++.++++++.+
T Consensus       162 ~~~dip~li~~~~~  175 (176)
T d1d1ta2         162 SRDDVPKLVTEFLA  175 (176)
T ss_dssp             HHHHHHHHHHHHTT
T ss_pred             cHHHHHHHHHHHhC
Confidence            66778888777643

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.93  E-value=1.9e-26  Score=193.37  Aligned_cols=173  Identities=20%  Similarity=0.240  Sum_probs=145.8

Q ss_pred             hhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336          164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  242 (373)
Q Consensus       164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~  242 (373)
                      ++||+++++++|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|+++.+++++++.++++|++.++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~Ga~~vi~~~~   79 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSRS   79 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETTC
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccccccccccCCc
Confidence            5799999999999999999999999999999986 9999999999999999 8888888999999999999999999887


Q ss_pred             CCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCC-
Q 017336          243 HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK-  320 (373)
Q Consensus       243 ~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-  320 (373)
                      .+  +.+.+++.+++ ++|++||++|+ +.++.++++|+++ |+++.+|..............+.++.++.++...... 
T Consensus        80 ~~--~~~~v~~~t~~~g~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (183)
T d1pqwa_          80 VD--FADEILELTDGYGVDVVLNSLAG-EAIQRGVQILAPG-GRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLK  155 (183)
T ss_dssp             ST--HHHHHHHHTTTCCEEEEEECCCT-HHHHHHHHTEEEE-EEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHHH
T ss_pred             cC--HHHHHHHHhCCCCEEEEEecccc-hHHHHHHHHhcCC-CEEEEEccCCCCCCcccchHHHhCCcEEEEEEccceec
Confidence            76  99999999988 99999999998 7899999999997 9999998765433333444445688888876542211 


Q ss_pred             -----CCCCHHHHHHHHHcCCCCCCC
Q 017336          321 -----PRTDLPSVVDMYMNKQLELEK  341 (373)
Q Consensus       321 -----~~~~~~~~~~~l~~~~l~~~~  341 (373)
                           .++.++++++++.+|++++.|
T Consensus       156 ~~~~~~~~~~~~v~~~i~~G~i~p~P  181 (183)
T d1pqwa_         156 LQPARYRQLLQHILQHVADGKLEVLP  181 (183)
T ss_dssp             HCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             cCHHHHHHHHHHHHHHHHCCCCceeC
Confidence                 123578888999999887654

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.93  E-value=1.7e-25  Score=187.31  Aligned_cols=169  Identities=25%  Similarity=0.363  Sum_probs=143.9

Q ss_pred             chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336          163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  242 (373)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~  242 (373)
                      ++.+|.+.|+++|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|+++++++.+
T Consensus         3 ~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~   82 (182)
T d1vj0a2           3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRE   82 (182)
T ss_dssp             HHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTT
T ss_pred             HHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEeccc
Confidence            45688899999999999888889999999999999999999999999999988999999999999999999999999877


Q ss_pred             CC-ccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh--hcccceEEEEeccC
Q 017336          243 HD-RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN--VLNERTLKGTFFGN  318 (373)
Q Consensus       243 ~~-~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~--~~~~~~i~g~~~~~  318 (373)
                      .+ .++.+.+.+.+.+ ++|+||||+|++..++.++++++++ |+++++|.......+.+....  +.|++++.|+..++
T Consensus        83 ~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~~  161 (182)
T d1vj0a2          83 TSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD  161 (182)
T ss_dssp             SCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCC
T ss_pred             cchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCC-CEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeCC
Confidence            65 2345567778877 8999999999988899999999997 999999976655556655443  45999999987654


Q ss_pred             CCCCCCHHHHHHHHHcC
Q 017336          319 YKPRTDLPSVVDMYMNK  335 (373)
Q Consensus       319 ~~~~~~~~~~~~~l~~~  335 (373)
                      .   ++++++++++.++
T Consensus       162 ~---~~~~~~~~~i~~~  175 (182)
T d1vj0a2         162 T---SHFVKTVSITSRN  175 (182)
T ss_dssp             H---HHHHHHHHHHHTC
T ss_pred             H---HHHHHHHHHHHHC
Confidence            2   3577888887765

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.93  E-value=7.4e-28  Score=200.62  Aligned_cols=157  Identities=17%  Similarity=0.070  Sum_probs=130.4

Q ss_pred             CcccchhhhccCCCC-----eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC----------CCCCccccccc
Q 017336            1 MSSTAAAVAWEAGKP-----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT----------PLFPRIFGHEA   65 (373)
Q Consensus         1 m~~~~a~~~~~~~~~-----~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~----------~~~p~i~G~e~   65 (373)
                      |++|||+++.++|+|     ++..+++.|+|+++||||||++++||++|++.++|.++.          ..+|.++|+|+
T Consensus         1 m~t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~   80 (175)
T d1gu7a1           1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG   80 (175)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred             CceeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCccccccc
Confidence            899999999999987     345677777889999999999999999999998876432          24678999999


Q ss_pred             eEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceee
Q 017336           66 AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSE  145 (373)
Q Consensus        66 ~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~  145 (373)
                      +|+|+++|..+..++.||+|.....                                                ..|+|+|
T Consensus        81 ~g~V~~~~~~~~~~~~g~~v~~~~~------------------------------------------------~~g~~ae  112 (175)
T d1gu7a1          81 LFEVIKVGSNVSSLEAGDWVIPSHV------------------------------------------------NFGTWRT  112 (175)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEESSS------------------------------------------------CCCCSBS
T ss_pred             ccccccccccccccccccceecccc------------------------------------------------ccccccc
Confidence            9999999999999999999985421                                                2368999


Q ss_pred             EEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhh-ccCCCCCCEEEEEC-C-CHHHHHHHHH
Q 017336          146 YTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN-VAKPERGSSVAVFG-L-GAVGLAAAEG  207 (373)
Q Consensus       146 ~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~-~~~~~~~~~vlI~G-~-g~~G~~ai~l  207 (373)
                      |+.+++++++++|++++.+.  ++++..+|||+++.. .+.+++|++|||+| + |++|++++|+
T Consensus       113 y~~v~~~~~~~iP~~~~~~~--a~~~~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ~  175 (175)
T d1gu7a1         113 HALGNDDDFIKLPNPAQSKA--NGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  175 (175)
T ss_dssp             EEEEEGGGEEEECCHHHHHH--TTCSCCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             eeeehhhhccCCCccchhhh--hccchHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEeC
Confidence            99999999999999875333  345578899988664 46799999999997 4 6799888763

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.92  E-value=1.7e-25  Score=185.13  Aligned_cols=168  Identities=24%  Similarity=0.331  Sum_probs=146.4

Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      +++.+||+++|++.|||+++ ++++++++++|||+|+ |++|++++|+++.+|+.+|++++++++|++.++++|++.+++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~   79 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVIN   79 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeec
Confidence            57899999999999999986 6689999999999996 999999999999999779999999999999999999999998


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccC
Q 017336          240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN  318 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~  318 (373)
                      +++.+  +.+.+++.+.+ ++|++|||+|++..++.++++++++ |+++.+|....+..++.... +.+++++.|+..++
T Consensus        80 ~~~~~--~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~~~~~~~~~~~-~~k~i~i~Gs~~~~  155 (170)
T d1jvba2          80 ASMQD--PLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGADLHYHAPLI-TLSEIQFVGSLVGN  155 (170)
T ss_dssp             TTTSC--HHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSCCCCCCCHHHH-HHHTCEEEECCSCC
T ss_pred             cCCcC--HHHHHHHHhhcccchhhhcccccchHHHhhhhhcccC-CEEEEeccccCccccCHHHH-HhCCcEEEEEecCC
Confidence            87766  88888888877 8999999999988899999999997 99999998765544443332 45999999987654


Q ss_pred             CCCCCCHHHHHHHHHcCC
Q 017336          319 YKPRTDLPSVVDMYMNKQ  336 (373)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~  336 (373)
                         .++++++++++++||
T Consensus       156 ---~~d~~~~l~lv~~GK  170 (170)
T d1jvba2         156 ---QSDFLGIMRLAEAGK  170 (170)
T ss_dssp             ---HHHHHHHHHHHHTTS
T ss_pred             ---HHHHHHHHHHHHcCC
Confidence               356899999999885

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.92  E-value=6.7e-25  Score=182.48  Aligned_cols=173  Identities=51%  Similarity=0.869  Sum_probs=142.3

Q ss_pred             CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336          162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  241 (373)
Q Consensus       162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~  241 (373)
                      |+++||.++|++.|+|+++.+.++++++++|+|+|+|++|++++++++..|+.+|++++++++|++.++++|+++++|+.
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~   81 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN   81 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence            57889999999999999988889999999999999999999999999999988999999999999999999999999987


Q ss_pred             CCCccHHHHHHHHc-CCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCC
Q 017336          242 EHDRPIQEVIAEMT-NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK  320 (373)
Q Consensus       242 ~~~~~~~~~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  320 (373)
                      +.+. +.+.+.+.+ ++++|++||++|+...++.++.++.+++++++..|..... ........+.+++++.|+..+++.
T Consensus        82 ~~~~-~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~-~~~~~~~~~~~~~~i~Gs~~G~~~  159 (175)
T d1cdoa2          82 DHSE-PISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLH-DVATRPIQLIAGRTWKGSMFGGFK  159 (175)
T ss_dssp             GCSS-CHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSS-CEEECHHHHHTTCEEEECSGGGCC
T ss_pred             Ccch-hHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCc-ccCccHHHHHCCcEEEEEEEeCCc
Confidence            6543 344455544 4499999999999888899999988863555555554433 333333335588899999888877


Q ss_pred             CCCCHHHHHHHHHcCC
Q 017336          321 PRTDLPSVVDMYMNKQ  336 (373)
Q Consensus       321 ~~~~~~~~~~~l~~~~  336 (373)
                      +++++.++++++.+||
T Consensus       160 ~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         160 GKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            7778999999998875

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.1e-24  Score=178.63  Aligned_cols=170  Identities=22%  Similarity=0.346  Sum_probs=139.0

Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      +|+++||.+ .++++||+++ ++++++++++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++++
T Consensus         1 vS~e~Aal~-epla~a~~a~-~~~~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~   78 (171)
T d1pl8a2           1 VTFEEGALI-EPLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQI   78 (171)
T ss_dssp             SCHHHHHHH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHH-HHHHHHHHHH-HHhCCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccc
Confidence            477888866 4788999984 67899999999999999999999999999999889999999999999999999999888


Q ss_pred             CCCCcc-HHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCC
Q 017336          241 SEHDRP-IQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY  319 (373)
Q Consensus       241 ~~~~~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  319 (373)
                      ++.+.. ..+.+....+.++|+||||+|++..++.++++++++ |+++++|.......+++... +.|++++.|+..   
T Consensus        79 ~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~g-G~iv~~G~~~~~~~~~~~~~-~~k~l~i~Gs~~---  153 (171)
T d1pl8a2          79 SKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGSEMTTVPLLHA-AIREVDIKGVFR---  153 (171)
T ss_dssp             SSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCCSCCCCCHHHH-HHTTCEEEECCS---
T ss_pred             cccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCC-CEEEEEecCCCCCccCHHHH-HHCCcEEEEEeC---
Confidence            776622 122222333448999999999988999999999997 99999998765544443322 349999999753   


Q ss_pred             CCCCCHHHHHHHHHcCCCC
Q 017336          320 KPRTDLPSVVDMYMNKQLE  338 (373)
Q Consensus       320 ~~~~~~~~~~~~l~~~~l~  338 (373)
                       +.++++++++++++|+++
T Consensus       154 -~~~~~~~al~li~~gkid  171 (171)
T d1pl8a2         154 -YCNTWPVAISMLASKSVN  171 (171)
T ss_dssp             -CSSCHHHHHHHHHTTSCC
T ss_pred             -CHhHHHHHHHHHHcCCCC
Confidence             235799999999999873

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=3.8e-25  Score=184.67  Aligned_cols=130  Identities=22%  Similarity=0.292  Sum_probs=120.9

Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      +|+++||+++++++|||++|.+.++++++++|||+|+ |++|++++|+|+.+|+ +|++++++++|++.++++|+++++|
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhcCCeEEEE
Confidence            5889999999999999999988899999999999976 7899999999999999 8999999999999999999999999


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCC
Q 017336          240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD  295 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~  295 (373)
                      +++.+  +.+.+++++++ ++|+|+|++|+ +.+..++.+++++ |+++.++.....
T Consensus        80 ~~~~d--~~~~v~~~t~g~g~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~  132 (179)
T d1qora2          80 YREED--LVERLKEITGGKKVRVVYDSVGR-DTWERSLDCLQRR-GLMVSFGNSSGA  132 (179)
T ss_dssp             TTTSC--HHHHHHHHTTTCCEEEEEECSCG-GGHHHHHHTEEEE-EEEEECCCTTCC
T ss_pred             CCCCC--HHHHHHHHhCCCCeEEEEeCccH-HHHHHHHHHHhcC-CeeeecccccCC
Confidence            98876  99999999988 99999999987 7899999999997 999999876643

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.92  E-value=1.2e-24  Score=179.29  Aligned_cols=164  Identities=25%  Similarity=0.372  Sum_probs=140.1

Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      +++++||+++|+++|||+++ ++++++++++|||+|+|++|++++|+||.+|+ +|++++++++|++.++++|+++++++
T Consensus         1 v~f~~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGL-KQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeeccccHHHHHHHHHHcCC-ccceecchhhHHHhhhccCccccccc
Confidence            57899999999999999986 56899999999999999999999999999998 89999999999999999999999998


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEeccCC
Q 017336          241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNY  319 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~  319 (373)
                      .+.+  +.+.+++.+. ++|.+++++++++.++.++++++++ |+++.+|.....  ..++...+ .+++++.|+..++ 
T Consensus        79 ~~~~--~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~k~~~i~Gs~~~~-  151 (166)
T d1llua2          79 RQED--PVEAIQRDIG-GAHGVLVTAVSNSAFGQAIGMARRG-GTIALVGLPPGD--FPTPIFDVVLKGLHIAGSIVGT-  151 (166)
T ss_dssp             TTSC--HHHHHHHHHS-SEEEEEECCSCHHHHHHHHTTEEEE-EEEEECCCCSSE--EEEEHHHHHHTTCEEEECCSCC-
T ss_pred             cchh--HHHHHHHhhc-CCcccccccccchHHHHHHHHhcCC-cEEEEEEecCCC--ccCCHHHHHhCCcEEEEEeecC-
Confidence            8776  7788877665 5677777777779999999999997 999999986544  33444433 4999999987654 


Q ss_pred             CCCCCHHHHHHHHHcC
Q 017336          320 KPRTDLPSVVDMYMNK  335 (373)
Q Consensus       320 ~~~~~~~~~~~~l~~~  335 (373)
                        +++++++++++++|
T Consensus       152 --~~d~~e~l~l~~~G  165 (166)
T d1llua2         152 --RADLQEALDFAGEG  165 (166)
T ss_dssp             --HHHHHHHHHHHHTT
T ss_pred             --HHHHHHHHHHHHCc
Confidence              34689999999887

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.92  E-value=1.3e-24  Score=180.13  Aligned_cols=164  Identities=21%  Similarity=0.349  Sum_probs=140.0

Q ss_pred             chhhhhcccchhhhhhhhhhcc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336          163 LDKVCILSCGVSTGLGATLNVA-KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  241 (373)
Q Consensus       163 ~~~aa~~~~~~~ta~~~l~~~~-~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~  241 (373)
                      +.++|+++++++|||+++.+.. .++++++|||+|+|++|++++|+++.+|+.+|++++++++|++.++++|++++++++
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~   85 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR   85 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCc
Confidence            5788999999999999987655 489999999999999999999999999988999999999999999999999999887


Q ss_pred             CCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCC
Q 017336          242 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNY  319 (373)
Q Consensus       242 ~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~  319 (373)
                      ++   ..+...+.+.+ ++|+|||++|+...++.++++++++ |+++.+|... +  ..++... +.++++|.|+..+++
T Consensus        86 ~~---~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~-~--~~~~~~~l~~k~~~i~Gs~~~~~  158 (172)
T d1h2ba2          86 RD---PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGYGG-E--LRFPTIRVISSEVSFEGSLVGNY  158 (172)
T ss_dssp             SC---HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEE-EEEEECCCSS-C--CCCCHHHHHHTTCEEEECCSCCH
T ss_pred             cc---HHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCC-CEEEEEeCcc-c--ccCCHHHHHhCCcEEEEEEecCH
Confidence            65   55566677776 9999999999988899999999997 9999999743 3  3344443 349999999976553


Q ss_pred             CCCCCHHHHHHHHHcCC
Q 017336          320 KPRTDLPSVVDMYMNKQ  336 (373)
Q Consensus       320 ~~~~~~~~~~~~l~~~~  336 (373)
                         ++++++++++++|+
T Consensus       159 ---~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         159 ---VELHELVTLALQGK  172 (172)
T ss_dssp             ---HHHHHHHHHHHTTS
T ss_pred             ---HHHHHHHHHHHcCC
Confidence               46899999999885

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.91  E-value=5.5e-25  Score=181.57  Aligned_cols=170  Identities=14%  Similarity=0.123  Sum_probs=129.1

Q ss_pred             CCchhhhhcccchhhhhhhh---hhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce
Q 017336          161 APLDKVCILSCGVSTGLGAT---LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  236 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l---~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~  236 (373)
                      +|+++||+++++++|||+++   .+....+++++|||+|+ |++|.+++|+|+.+|+ +|+++.+++++.++++++|+++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k~~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHHHHHHHhcccce
Confidence            58899999999999999664   45678899999999986 9999999999999999 8999999999999999999999


Q ss_pred             eecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEe
Q 017336          237 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTF  315 (373)
Q Consensus       237 vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~  315 (373)
                      ++++++.   +.+.++...++++|+|||++|+ +.++.++++|+++ |+++.+|...+. ...++... +.|++++.|..
T Consensus        80 vi~~~~~---~~~~~~~~~~~gvD~vid~vgg-~~~~~~l~~l~~~-Griv~~G~~~g~-~~~~~~~~~~~k~~~i~Gv~  153 (176)
T d1xa0a2          80 VLAREDV---MAERIRPLDKQRWAAAVDPVGG-RTLATVLSRMRYG-GAVAVSGLTGGA-EVPTTVHPFILRGVSLLGID  153 (176)
T ss_dssp             EEECC------------CCSCCEEEEEECSTT-TTHHHHHHTEEEE-EEEEECSCCSSS-CCCCCSHHHHHTTCEEEECC
T ss_pred             eeecchh---HHHHHHHhhccCcCEEEEcCCc-hhHHHHHHHhCCC-ceEEEeecccCc-ccCCCHHHHHHCCcEEEEEe
Confidence            9998653   3344444444499999999998 7999999999997 999999987633 34444444 44999999964


Q ss_pred             ccCCCCCCCHHHHHHHHHcCCCCC
Q 017336          316 FGNYKPRTDLPSVVDMYMNKQLEL  339 (373)
Q Consensus       316 ~~~~~~~~~~~~~~~~l~~~~l~~  339 (373)
                      ... .+.+...++++.+. ++++|
T Consensus       154 ~~~-~~~~~~~~~~~~la-g~lkP  175 (176)
T d1xa0a2         154 SVY-CPMDLRLRIWERLA-GDLKP  175 (176)
T ss_dssp             SSS-CCHHHHHHHHHHHH-TTTCC
T ss_pred             CCc-CCHHHHHHHHHHHh-cccCC
Confidence            322 22233444555543 55543

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=4.9e-25  Score=176.61  Aligned_cols=131  Identities=17%  Similarity=0.154  Sum_probs=109.8

Q ss_pred             cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 017336            4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   80 (373)
Q Consensus         4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~   80 (373)
                      |||+++.+++++  +++++++.|+|+++||+|||.|+|||++|++...|.++. ..+|+++|+|++|+|+++|.  ..++
T Consensus         1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~--~~~~   78 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSED--PRFH   78 (146)
T ss_dssp             CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECS--TTCC
T ss_pred             CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeecc--CCcc
Confidence            899999998887  778999999999999999999999999999999987654 57899999999999999766  4789


Q ss_pred             CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336           81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  160 (373)
Q Consensus        81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~  160 (373)
                      +||+|.+.....                        |                   ....|+|+||+.+++++++++|++
T Consensus        79 ~g~~v~~~~~~~------------------------g-------------------~~~~G~~Aey~~v~~~~vv~lP~~  115 (146)
T d1o89a1          79 AGQEVLLTGWGV------------------------G-------------------ENHWGGLAEQARVKGDWLVAMPQG  115 (146)
T ss_dssp             TTCEEEEECTTB------------------------T-------------------TTBCCSSBSEEEECGGGCEECCTT
T ss_pred             ceeeEEeecccc------------------------e-------------------ecCCCcceeeeeeeeeeEEECCCC
Confidence            999998642110                        1                   112369999999999999999999


Q ss_pred             CCchhhhhcccchhhhhhh
Q 017336          161 APLDKVCILSCGVSTGLGA  179 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~  179 (373)
                      +|+++||+++++..||+..
T Consensus       116 ls~~eAA~l~~a~~tA~~~  134 (146)
T d1o89a1         116 QAAKEISLSEAPNFAEAII  134 (146)
T ss_dssp             SCCEEECGGGHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHH
Confidence            9999999999888888654

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.91  E-value=2.1e-24  Score=180.53  Aligned_cols=164  Identities=17%  Similarity=0.212  Sum_probs=133.9

Q ss_pred             hhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCc
Q 017336          167 CILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR  245 (373)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~  245 (373)
                      ++++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|+++++++.+.+ 
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~-   85 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKTVN-   85 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTSCS-
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhhhhhccccccc-
Confidence            5677889999999999999999999999987 8999999999999999 899999999999999999999999988776 


Q ss_pred             cHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCC-----ceeeccchh-hcccceEEEEeccC
Q 017336          246 PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-----AVFMTKPIN-VLNERTLKGTFFGN  318 (373)
Q Consensus       246 ~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-----~~~~~~~~~-~~~~~~i~g~~~~~  318 (373)
                       +.+.+.+.+.+ ++|+|||++|+ +.++.++++++++ |+++.+|..+..     ....+.... +.+++++.|++...
T Consensus        86 -~~~~~~~~~~~~Gvd~v~D~vG~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~  162 (182)
T d1v3va2          86 -SLEEALKKASPDGYDCYFDNVGG-EFLNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYR  162 (182)
T ss_dssp             -CHHHHHHHHCTTCEEEEEESSCH-HHHHHHGGGEEEE-EEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGG
T ss_pred             -HHHHHHHHhhcCCCceeEEecCc-hhhhhhhhhccCC-CeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEec
Confidence             66777766666 99999999997 8899999999997 999999965321     122233333 34999999987765


Q ss_pred             CCCC---CCHHHHHHHHHcC
Q 017336          319 YKPR---TDLPSVVDMYMNK  335 (373)
Q Consensus       319 ~~~~---~~~~~~~~~l~~~  335 (373)
                      +...   +.++++++++.+|
T Consensus       163 ~~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         163 WQGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             CCHHHHHHHHHHHHHHHHTT
T ss_pred             cChHHHHHHHHHHHHHHhCc
Confidence            5321   2356667776654

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.91  E-value=1.8e-23  Score=172.92  Aligned_cols=166  Identities=25%  Similarity=0.368  Sum_probs=135.4

Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      +|+++||.+ .++++||+++ ++++++++++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|++..++.
T Consensus         1 VS~e~Aal~-ePla~a~~a~-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGALL-EPLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVV   77 (170)
T ss_dssp             SCHHHHHTH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHH-HHHHHHHHHH-HHhCCCCCCEEEEEcccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCCcEEEec
Confidence            477888876 3788999985 67899999999999999999999999999999 89999999999999999999887655


Q ss_pred             CCCCc---cHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEec
Q 017336          241 SEHDR---PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFF  316 (373)
Q Consensus       241 ~~~~~---~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~  316 (373)
                      +....   ++.+.+.+..++++|+||||+|++..++.++++++++ |+++.+|......  .++...+ .+++++.|+..
T Consensus        78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~~~--~~~~~~~~~k~i~i~gs~~  154 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGSQMV--TVPLVNACAREIDIKSVFR  154 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCSSCC--CCCHHHHHTTTCEEEECCS
T ss_pred             cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcC-CceEEEecCCCCC--CcCHHHHHHCCCEEEEEEC
Confidence            44332   2344555555569999999999988899999999997 9999999876443  3344333 49999998753


Q ss_pred             cCCCCCCCHHHHHHHHHcCC
Q 017336          317 GNYKPRTDLPSVVDMYMNKQ  336 (373)
Q Consensus       317 ~~~~~~~~~~~~~~~l~~~~  336 (373)
                          +.++++++++++++|+
T Consensus       155 ----~~~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         155 ----YCNDYPIALEMVASGR  170 (170)
T ss_dssp             ----CSSCHHHHHHHHHTTS
T ss_pred             ----CHHHHHHHHHHHHcCC
Confidence                2357999999999885

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.91  E-value=4.6e-26  Score=186.60  Aligned_cols=150  Identities=18%  Similarity=0.184  Sum_probs=125.3

Q ss_pred             cccchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCC
Q 017336            2 SSTAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSD   78 (373)
Q Consensus         2 ~~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~   78 (373)
                      ++|||+++...+++  +++++++.|+|++|||||||+|+|||++|++.+.|.++. ...|.++|+|++|+|++  +.+..
T Consensus         2 ~~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~~   79 (162)
T d1tt7a1           2 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDPR   79 (162)
T ss_dssp             CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSSTT
T ss_pred             CcEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccccccc--ccccc
Confidence            46899999887765  899999999999999999999999999999999887764 46678999999999998  56678


Q ss_pred             CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336           79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  158 (373)
Q Consensus        79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p  158 (373)
                      +++||+|.......                        |                   ....|+|+||+.+|+++++++|
T Consensus        80 ~~~g~~v~~~~~~~------------------------g-------------------~~~~G~~aey~~v~~~~l~~iP  116 (162)
T d1tt7a1          80 FAEGDEVIATSYEL------------------------G-------------------VSRDGGLSEYASVPGDWLVPLP  116 (162)
T ss_dssp             CCTTCEEEEESTTB------------------------T-------------------TTBCCSSBSSEEECGGGEEECC
T ss_pred             cccceeeEeeeccc------------------------e-------------------eccccccceEEEecHHHEEECC
Confidence            99999998653210                        1                   1123699999999999999999


Q ss_pred             CCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC
Q 017336          159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL  197 (373)
Q Consensus       159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~  197 (373)
                      +++++++||.+++..+|||.++.. ..+..+++|||+|+
T Consensus       117 ~~ls~~~Aa~~~~~~~ta~~~~~~-~~~~~~~~Vli~ga  154 (162)
T d1tt7a1         117 QNLSLKEAMVDQLLTIVDREVSLE-ETPGALKDILQNRI  154 (162)
T ss_dssp             TTCCHHHHHHSCSTTSEEEEECST-THHHHHHHTTTTCC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECC
Confidence            999999999999999999987543 44555677888876

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.91  E-value=8.4e-24  Score=174.53  Aligned_cols=167  Identities=26%  Similarity=0.447  Sum_probs=142.3

Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      +|+++||+++++++|||+++ +..+++++++|||+|+|++|++++|+++..|+ +|++++++++|+++++++|++.++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al-~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeecccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhcCcceeccc
Confidence            58899999999999999985 56899999999999999999999999999999 89999999999999999999999998


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCC
Q 017336          241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNY  319 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~  319 (373)
                      .+.+  +.+.+++.+.+ .|.++++.+++..++.++++++++ |+++.+|....+..+  +... +.+++++.|+..+. 
T Consensus        79 ~~~~--~~~~~~~~~~~-~~~~v~~~~~~~~~~~a~~~l~~~-G~i~~~g~~~~~~~~--~~~~~~~~~~~i~gs~~~~-  151 (168)
T d1rjwa2          79 LKED--AAKFMKEKVGG-VHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEEMPI--PIFDTVLNGIKIIGSIVGT-  151 (168)
T ss_dssp             TTSC--HHHHHHHHHSS-EEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSSEEEE--EHHHHHHTTCEEEECCSCC-
T ss_pred             ccch--hhhhcccccCC-CceEEeecCCHHHHHHHHHHhccC-CceEecccccCCCCC--CHHHHHHCCcEEEEEeeCC-
Confidence            8876  88888888875 445556667778999999999997 999999987644444  3333 44999999987543 


Q ss_pred             CCCCCHHHHHHHHHcCCCC
Q 017336          320 KPRTDLPSVVDMYMNKQLE  338 (373)
Q Consensus       320 ~~~~~~~~~~~~l~~~~l~  338 (373)
                        +++++++++++.+|+++
T Consensus       152 --~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         152 --RKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             --HHHHHHHHHHHHTTSCC
T ss_pred             --HHHHHHHHHHHHhCCCC
Confidence              45799999999999763

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=1.3e-24  Score=179.24  Aligned_cols=166  Identities=22%  Similarity=0.325  Sum_probs=135.9

Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      +|++.||++.|+..|||+++ ++++++++++|||+|+|++|++++|+||.+|+ +|++++++++|++.++++|+++++++
T Consensus         1 lp~e~AApl~cag~Ta~~al-~~~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~lGa~~~i~~   78 (168)
T d1piwa2           1 IPSHLAAPLLCGGLTVYSPL-VRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIAT   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEG
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCcCCCCEEEEECCCCcchhHHHHhhhccc-cccccccchhHHHHhhccCCcEEeec
Confidence            35677899999999999986 56899999999999999999999999999999 89999999999999999999999887


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChH--hHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccC
Q 017336          241 SEHDRPIQEVIAEMTNGGVDRSVECTGNID--NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN  318 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~--~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~  318 (373)
                      .++. ++.    +...+++|+++||+++..  .++.++++++++ |+++.+|.......++.... +.++++|.|+..++
T Consensus        79 ~~~~-~~~----~~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~-~~k~~~i~Gs~~g~  151 (168)
T d1piwa2          79 LEEG-DWG----EKYFDTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQHEMLSLKPY-GLKAVSISYSALGS  151 (168)
T ss_dssp             GGTS-CHH----HHSCSCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCSSCCEEECGG-GCBSCEEEECCCCC
T ss_pred             cchH-HHH----HhhhcccceEEEEecCCccchHHHHHHHhhcc-ceEEEeccccccccccHHHH-HhCCcEEEEEeeCC
Confidence            6543 232    233348999999988643  467899999997 99999998765554544333 44999999987654


Q ss_pred             CCCCCCHHHHHHHHHcCCCC
Q 017336          319 YKPRTDLPSVVDMYMNKQLE  338 (373)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~l~  338 (373)
                         .++++++++++.+|+++
T Consensus       152 ---~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         152 ---IKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             ---HHHHHHHHHHHHHTTCC
T ss_pred             ---HHHHHHHHHHHHhCCCC
Confidence               34799999999999763

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=3.2e-24  Score=176.95  Aligned_cols=164  Identities=21%  Similarity=0.317  Sum_probs=131.2

Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  240 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~  240 (373)
                      .+++.+|.++|+.+|+|+++ +++++++|++|||+|+|++|++++|+||.+|+ ++++++++++++++++++|++.++++
T Consensus         4 ~~~a~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga-~~i~~~~~~~~~~~a~~lGad~~i~~   81 (168)
T d1uufa2           4 EQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNS   81 (168)
T ss_dssp             GGHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEET
T ss_pred             ccHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEeccchHHHHHHHHhhcccc-cchhhccchhHHHHHhccCCcEEEEC
Confidence            45678888999999999986 67999999999999999999999999999999 67788899999999999999999988


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCC
Q 017336          241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNY  319 (373)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~  319 (373)
                      .+.+      ......+++|++||++|++..++.++++++++ |+++.+|..... ...+.... +.+++++.|+..++ 
T Consensus        82 ~~~~------~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~l~~k~~~i~Gs~~~~-  152 (168)
T d1uufa2          82 RNAD------EMAAHLKSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPATP-HKSPEVFNLIMKRRAIAGSMIGG-  152 (168)
T ss_dssp             TCHH------HHHTTTTCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC--------CHHHHHTTTCEEEECCSCC-
T ss_pred             chhh------HHHHhcCCCceeeeeeecchhHHHHHHHHhcC-CEEEEeccCCCC-cccccHHHHHHCCcEEEEEeecC-
Confidence            7642      11122238999999999978899999999997 999999976533 22333333 45999999987654 


Q ss_pred             CCCCCHHHHHHHHHcCCC
Q 017336          320 KPRTDLPSVVDMYMNKQL  337 (373)
Q Consensus       320 ~~~~~~~~~~~~l~~~~l  337 (373)
                        .++++++++++.++++
T Consensus       153 --~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         153 --IPETQEMLDFCAEHGI  168 (168)
T ss_dssp             --HHHHHHHHHHHHHHTC
T ss_pred             --HHHHHHHHHHHHHcCC
Confidence              3468889998887653

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.89  E-value=1.4e-23  Score=176.38  Aligned_cols=172  Identities=16%  Similarity=0.211  Sum_probs=131.9

Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEE-CC-CHHHHHHHHHHHHcCCcEEEEEcCC----hhHHHHHHhcCC
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF-GL-GAVGLAAAEGARIAGASRIIGVDRS----SKRFEEAKKFGV  234 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~-G~-g~~G~~ai~la~~~g~~~V~~~~~~----~~~~~~~~~lg~  234 (373)
                      +|+++||+++++++|||++|.+.+++++|++|+|+ |+ |++|++++|+||.+|+ +|+++.++    +++.+.++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga-~vI~~v~~~~~~~~~~~~~~~lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCC-eEEEEEecccccchHHhhhhhccc
Confidence            57899999999999999999999999999999997 55 8999999999999999 77776544    345667889999


Q ss_pred             ceeecCCCC-CccHHHHHHHHc---CCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccc
Q 017336          235 TDFVNTSEH-DRPIQEVIAEMT---NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNER  309 (373)
Q Consensus       235 ~~vi~~~~~-~~~~~~~~~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~  309 (373)
                      ++++++++. ..++.+.+++.+   ++++|++||++|+ +.+..++++|+++ |+++.+|..+.. ...++... +.|++
T Consensus        80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~-~~~~~~~~~l~~~-G~~v~~G~~~~~-~~~~~~~~l~~k~~  156 (189)
T d1gu7a2          80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGG-KSSTGIARKLNNN-GLMLTYGGMSFQ-PVTIPTSLYIFKNF  156 (189)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCH-HHHHHHHHTSCTT-CEEEECCCCSSC-CEEECHHHHHHSCC
T ss_pred             cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCc-chhhhhhhhhcCC-cEEEEECCccCC-CccCcHHHHHHCCc
Confidence            999987542 223555555543   4489999999997 7789999999997 999999976533 33444443 34999


Q ss_pred             eEEEEeccCCCCC------CCHHHHHHHHHcCC
Q 017336          310 TLKGTFFGNYKPR------TDLPSVVDMYMNKQ  336 (373)
Q Consensus       310 ~i~g~~~~~~~~~------~~~~~~~~~l~~~~  336 (373)
                      ++.|++++.+...      +.+.++++++++|+
T Consensus       157 ~i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         157 TSAGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             EEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            9999876543211      24666777777664

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=2.7e-23  Score=174.31  Aligned_cols=171  Identities=18%  Similarity=0.198  Sum_probs=128.6

Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCC--CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHH-HHHhcCCce
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERG--SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVTD  236 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~--~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~-~~~~lg~~~  236 (373)
                      +|+...| ++++.+|||+++.+.++++++  ++|||+|+ |++|++++|+||.+|+++|+++++++++.. +.+++|++.
T Consensus         2 ~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~   80 (187)
T d1vj1a2           2 LSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA   80 (187)
T ss_dssp             GGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred             ccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE
Confidence            4555643 667899999999999999987  88999986 999999999999999977887766665544 556799999


Q ss_pred             eecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCC-ceeecc-------ch-hhcc
Q 017336          237 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTK-------PI-NVLN  307 (373)
Q Consensus       237 vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~-------~~-~~~~  307 (373)
                      ++|+.+++  +.+.+++.++.|+|+|||++|+ +.++.++++++++ |+++.+|..+.. ...+..       .. ...+
T Consensus        81 vi~~~~~~--~~~~~~~~~~~GvDvv~D~vGg-~~~~~~~~~l~~~-G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~k  156 (187)
T d1vj1a2          81 AVNYKTGN--VAEQLREACPGGVDVYFDNVGG-DISNTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPPAVEAIRKER  156 (187)
T ss_dssp             EEETTSSC--HHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEEC------------CCCCCHHHHHHHHHT
T ss_pred             Eeeccchh--HHHHHHHHhccCceEEEecCCc-hhHHHHhhhcccc-ccEEEeccccccccccccCCchHHHHHHHHHhc
Confidence            99998887  8899999987799999999997 7899999999997 999999975421 111111       11 1237


Q ss_pred             cceEEEEeccCCCCC--CCHHHHHHHHHcCC
Q 017336          308 ERTLKGTFFGNYKPR--TDLPSVVDMYMNKQ  336 (373)
Q Consensus       308 ~~~i~g~~~~~~~~~--~~~~~~~~~l~~~~  336 (373)
                      ++++.|+.+..+.++  +.++++++++.+|+
T Consensus       157 ~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         157 NITRERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             TCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             ceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            888888776554332  34666777777764

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.88  E-value=2.2e-23  Score=172.18  Aligned_cols=146  Identities=19%  Similarity=0.293  Sum_probs=117.8

Q ss_pred             CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336          161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~  239 (373)
                      +++++||+++++++|||+++. .++++++++|||+|+ |++|++++|+||.+|+ +|+++++++++++.++++|++++++
T Consensus         1 ls~eeAA~l~~~~~TA~~al~-~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~lGa~~~i~   78 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAAT   78 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHH-HTTCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeccccchhhhhhhhccccc-ccccccccccccccccccccceeee
Confidence            578999999999999999875 589999999999986 9999999999999999 8999999999999999999999998


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEecc
Q 017336          240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFG  317 (373)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~  317 (373)
                      +.+    ..   .+.+.+ ++|+|||++|.  .++.++++++++ |+++.+|..++. ...++... +.|++++.|+.+.
T Consensus        79 ~~~----~~---~~~~~~~g~D~v~d~~G~--~~~~~~~~l~~~-G~~v~~G~~~g~-~~~~~~~~~~~k~~~i~g~~~~  147 (171)
T d1iz0a2          79 YAE----VP---ERAKAWGGLDLVLEVRGK--EVEESLGLLAHG-GRLVYIGAAEGE-VAPIPPLRLMRRNLAVLGFWLT  147 (171)
T ss_dssp             GGG----HH---HHHHHTTSEEEEEECSCT--THHHHHTTEEEE-EEEEEC--------CCCCTTHHHHTTCEEEECCHH
T ss_pred             hhh----hh---hhhhccccccccccccch--hHHHHHHHHhcC-CcEEEEeCCCCC-CCCccHHHHHHCCcEEEEEeCc
Confidence            754    32   333444 89999999874  678999999997 999999976532 33333333 4599999998765


Q ss_pred             CC
Q 017336          318 NY  319 (373)
Q Consensus       318 ~~  319 (373)
                      .+
T Consensus       148 ~~  149 (171)
T d1iz0a2         148 PL  149 (171)
T ss_dssp             HH
T ss_pred             Ch
Confidence            54

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.86  E-value=1.9e-21  Score=163.55  Aligned_cols=166  Identities=23%  Similarity=0.205  Sum_probs=133.0

Q ss_pred             hhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCC
Q 017336          164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH  243 (373)
Q Consensus       164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~  243 (373)
                      ++.+.++..+.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|++++.+++|++.++++|+++++++.+.
T Consensus         2 ~d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~   80 (195)
T d1kola2           2 RDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDT   80 (195)
T ss_dssp             HHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSS
T ss_pred             chHHhcccHHHHHHHHH-HHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCCc
Confidence            46677888999999995 67999999999999999999999999999999899999999999999999999999988777


Q ss_pred             CccHHHHHHHHcCC-CccEEEEccCC---------------hHhHHHHHHHhhcCCcEEEEEcCCCCCceee--------
Q 017336          244 DRPIQEVIAEMTNG-GVDRSVECTGN---------------IDNMISAFECVHDGWGVAVLVGVPSKDAVFM--------  299 (373)
Q Consensus       244 ~~~~~~~~~~~~~~-~~d~vid~~g~---------------~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~--------  299 (373)
                      +  +.+.+.+++++ ++|++||++|.               +..++.++++++++ |+++++|.........        
T Consensus        81 ~--~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~g-G~v~~~G~~~~~~~~~~~~~~~~~  157 (195)
T d1kola2          81 P--LHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKIG  157 (195)
T ss_dssp             C--HHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECSCCCSCCTTCSSHHHHTT
T ss_pred             C--HHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcC-CEEEEeeecCCCcccchhhhhhcC
Confidence            6  88999999988 99999999984               36899999999997 9999999754322111        


Q ss_pred             ---ccc-hhhcccceEEEEeccCCCCCCCHHHHHHHHHcCC
Q 017336          300 ---TKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQ  336 (373)
Q Consensus       300 ---~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~  336 (373)
                         +.. ..+.|+++|.+..   ...++.++++++++.+++
T Consensus       158 ~~~~~~~~~~~k~~~i~~g~---~~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         158 SLSIRFGLGWAKSHSFHTGQ---TPVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             CCCCCHHHHHHTTCEEEESS---CCHHHHHHHHHHHHHTTS
T ss_pred             ceeeeHHHHHhhcceeccCC---CchHHHHHHHHHHHHcCC
Confidence               111 1123667765422   221234677788777653

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=1.9e-21  Score=160.55  Aligned_cols=147  Identities=16%  Similarity=0.216  Sum_probs=118.4

Q ss_pred             CCchhhhhcccchhhhhhhhh---hccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce
Q 017336          161 APLDKVCILSCGVSTGLGATL---NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  236 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~---~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~  236 (373)
                      +|+.+||.++++.+|||++++   +.....++++|||+|+ |++|++++|+||.+|+ +|+++.+++++.+.++++|+++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k~~~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhHHHHHHhhcccc
Confidence            578899999999999997753   3344556679999987 9999999999999999 7999999999999999999999


Q ss_pred             eecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEe
Q 017336          237 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTF  315 (373)
Q Consensus       237 vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~  315 (373)
                      ++++++.+  +.   +.+....+|.++|++|+ +.+...+++++++ |+++.+|..... ....+... +.|++++.|++
T Consensus        80 vi~~~~~~--~~---~~l~~~~~~~vvD~Vgg-~~~~~~l~~l~~~-Griv~~G~~~~~-~~~~~~~~~~~k~~~i~G~~  151 (177)
T d1o89a2          80 VLPRDEFA--ES---RPLEKQVWAGAIDTVGD-KVLAKVLAQMNYG-GCVAACGLAGGF-TLPTTVMPFILRNVRLQGVD  151 (177)
T ss_dssp             EEEGGGSS--SC---CSSCCCCEEEEEESSCH-HHHHHHHHTEEEE-EEEEECCCTTCS-CCCCCSHHHHHHCCEEEECC
T ss_pred             ccccccHH--HH---HHHHhhcCCeeEEEcch-HHHHHHHHHhccc-cceEeecccCCc-cccccHHHHHHCCCeEEEEe
Confidence            99987654  21   12233368999999998 7899999999997 999999987643 33344333 34999999975


Q ss_pred             c
Q 017336          316 F  316 (373)
Q Consensus       316 ~  316 (373)
                      .
T Consensus       152 ~  152 (177)
T d1o89a2         152 S  152 (177)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.80  E-value=8e-21  Score=155.25  Aligned_cols=138  Identities=15%  Similarity=0.168  Sum_probs=108.7

Q ss_pred             chhhhhhh---hhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccH
Q 017336          172 GVSTGLGA---TLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPI  247 (373)
Q Consensus       172 ~~~ta~~~---l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~  247 (373)
                      +.+|||.+   |.+....+++++|||+|+ |++|.+++|+||.+|+ +|+++.++++|.++++++|++.++++++...  
T Consensus         4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~lGad~vi~~~~~~~--   80 (167)
T d1tt7a2           4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISREDVYD--   80 (167)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHHHCS--
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhhcccceEeccchhc--
Confidence            45677644   455566778889999987 9999999999999999 8999999999999999999999987653211  


Q ss_pred             HHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEec
Q 017336          248 QEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFF  316 (373)
Q Consensus       248 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~  316 (373)
                       +.++...++++|+|||++|+ +.++.++++|+++ |+++.+|...+. ...++... +.++++++|...
T Consensus        81 -~~~~~~~~~gvd~vid~vgg-~~~~~~~~~l~~~-G~iv~~G~~~g~-~~~~~~~~l~~k~~~i~G~~~  146 (167)
T d1tt7a2          81 -GTLKALSKQQWQGAVDPVGG-KQLASLLSKIQYG-GSVAVSGLTGGG-EVPATVYPFILRGVSLLGIDS  146 (167)
T ss_dssp             -SCCCSSCCCCEEEEEESCCT-HHHHHHHTTEEEE-EEEEECCCSSCS-CEEECSHHHHTSCCEEEECCS
T ss_pred             -hhhhcccCCCceEEEecCcH-HHHHHHHHHhccC-ceEEEeeccCCC-cccCCHHHHHHCCcEEEEEec
Confidence             11222333489999999998 8889999999997 999999988743 34444443 459999999653

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.68  E-value=1.1e-16  Score=126.88  Aligned_cols=134  Identities=15%  Similarity=0.053  Sum_probs=100.2

Q ss_pred             CcccchhhhccCC--CC----eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCC
Q 017336            1 MSSTAAAVAWEAG--KP----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGE   74 (373)
Q Consensus         1 m~~~~a~~~~~~~--~~----~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~   74 (373)
                      |.+.|++++.+..  .|    |++++.++|+|++||||||+++.++++......    +......++..+++|+|++  |
T Consensus         1 M~~~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~----~~~~~g~~~~g~~vg~Vv~--S   74 (147)
T d1v3va1           1 MVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIAS----KRLKEGAVMMGQQVARVVE--S   74 (147)
T ss_dssp             CCEEEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHG----GGSCTTSBCCCCEEEEEEE--E
T ss_pred             CcccEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEcccccccc----cccccCCccccceEEEEEE--e
Confidence            7888999888863  33    899999999999999999999999987532211    1222233456688999988  7


Q ss_pred             CCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCce
Q 017336           75 GVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCV  154 (373)
Q Consensus        75 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~  154 (373)
                      +++.|++||+|+..                                                    ++|+||.+++...+
T Consensus        75 ~~~~f~~GD~V~g~----------------------------------------------------~gw~ey~v~~~~~l  102 (147)
T d1v3va1          75 KNSAFPAGSIVLAQ----------------------------------------------------SGWTTHFISDGKGL  102 (147)
T ss_dssp             SCTTSCTTCEEEEC----------------------------------------------------CCSBSEEEECSSSC
T ss_pred             CCCcccCCCEEEEc----------------------------------------------------cCCEeEEEecccee
Confidence            78899999999833                                                    48999999999999


Q ss_pred             EeCCCCCCc-----hhhhhcccchhhhhh-hhhhccCCCCCCEEEE
Q 017336          155 AKINPLAPL-----DKVCILSCGVSTGLG-ATLNVAKPERGSSVAV  194 (373)
Q Consensus       155 ~~~p~~~~~-----~~aa~~~~~~~ta~~-~l~~~~~~~~~~~vlI  194 (373)
                      .++|++.+.     ...+++....+||++ .+.  ...+.|++||+
T Consensus       103 ~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~--~~~k~Getvv~  146 (147)
T d1v3va1         103 EKLLTEWPDKKIQYHEHVTKGFENMPAAFIEML--NGANLGKAVVT  146 (147)
T ss_dssp             EECCTTCCTTSSCCCEEEEECGGGHHHHHHHHH--TTCCSSEEEEE
T ss_pred             eEccccccccccchhhhHhccccchHHHHHHhh--CCCCCCCEEEe
Confidence            999876543     234456666677544 554  44567999986

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.46  E-value=2.3e-14  Score=99.37  Aligned_cols=73  Identities=19%  Similarity=0.245  Sum_probs=65.7

Q ss_pred             CCchhhhhcccchhhhhhhhh---hccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC
Q 017336          161 APLDKVCILSCGVSTGLGATL---NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  234 (373)
Q Consensus       161 ~~~~~aa~~~~~~~ta~~~l~---~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~  234 (373)
                      +|+++|+.++++++|||.+++   +....+++++|||+|+ |++|.+++|+++.+|+ +|+++.+++++.++++++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHHCCC
Confidence            578999999999999987754   4566789999999987 9999999999999999 89999999999999999985

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.16  E-value=4.6e-06  Score=66.39  Aligned_cols=103  Identities=18%  Similarity=0.191  Sum_probs=76.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec-CCC-C----------------CccHHH
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN-TSE-H----------------DRPIQE  249 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~-~~~-~----------------~~~~~~  249 (373)
                      +..+|+|+|+|.+|+.|++.|+.+|+ .|.+.+.+.++++.+++++...+.. ... .                .....+
T Consensus        28 ~pa~VvViGaGvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcCcHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            56799999999999999999999999 9999999999999999998765421 000 0                001223


Q ss_pred             HHHHHcCCCccEEEEccCCh------HhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          250 VIAEMTNGGVDRSVECTGNI------DNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       250 ~~~~~~~~~~d~vid~~g~~------~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      .+.+... ..|+||-++--+      -.-+.+++.|+++ +.++.+....
T Consensus       107 ~l~~~l~-~aDlVI~talipG~~aP~lit~~mv~~Mk~G-SVIVDvaidq  154 (183)
T d1l7da1         107 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEA  154 (183)
T ss_dssp             HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGG
T ss_pred             HHHHHHH-hhhhheeeeecCCcccceeehHHHHHhcCCC-cEEEEEeecC
Confidence            3434333 589999875432      1456899999997 9999988754

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.12  E-value=3.4e-06  Score=66.22  Aligned_cols=100  Identities=21%  Similarity=0.111  Sum_probs=74.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      +..+|+|+|+|.+|+.|++.|+.+|+ .|.+.+.+.++++.+++.....+.......    +.+.+... .+|+||.++=
T Consensus        31 ~pa~V~ViGaGvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~----~~l~~~~~-~aDivI~aal  104 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNS----AEIETAVA-EADLLIGAVL  104 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCH----HHHHHHHH-TCSEEEECCC
T ss_pred             CCcEEEEECCChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcccceeehhhh----hhHHHhhc-cCcEEEEeee
Confidence            56899999999999999999999999 899999999999999886443221111111    12333222 5899999865


Q ss_pred             Ch------HhHHHHHHHhhcCCcEEEEEcCCCC
Q 017336          268 NI------DNMISAFECVHDGWGVAVLVGVPSK  294 (373)
Q Consensus       268 ~~------~~~~~~~~~l~~~~g~~v~~g~~~~  294 (373)
                      -+      -..+..++.|+++ +.++.+..-.+
T Consensus       105 ipG~~aP~lIt~~mv~~Mk~G-SVIVDvaidqG  136 (168)
T d1pjca1         105 VPGRRAPILVPASLVEQMRTG-SVIVDVAVDQG  136 (168)
T ss_dssp             CTTSSCCCCBCHHHHTTSCTT-CEEEETTCTTC
T ss_pred             cCCcccCeeecHHHHhhcCCC-cEEEEeecCCC
Confidence            32      1356899999997 99999987553

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.80  E-value=3.7e-05  Score=60.99  Aligned_cols=73  Identities=19%  Similarity=0.216  Sum_probs=56.2

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCCCc
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGV  259 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~  259 (373)
                      ++...+.++++|||+|+|+++.+++..++..|++++.++.|+.++.+.+.+ ++...+ +....             ..+
T Consensus         9 l~~~~~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~-~~~~~-------------~~~   74 (167)
T d1npya1           9 IEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYI-NSLEN-------------QQA   74 (167)
T ss_dssp             HHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEE-SCCTT-------------CCC
T ss_pred             HHHcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhh-hcccc-------------cch
Confidence            455667788999999999999999999999999889999999988776654 555332 21111             268


Q ss_pred             cEEEEccC
Q 017336          260 DRSVECTG  267 (373)
Q Consensus       260 d~vid~~g  267 (373)
                      |+||+|+.
T Consensus        75 DliINaTp   82 (167)
T d1npya1          75 DILVNVTS   82 (167)
T ss_dssp             SEEEECSS
T ss_pred             hhheeccc
Confidence            99999975

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.67  E-value=1.4e-05  Score=66.07  Aligned_cols=102  Identities=19%  Similarity=0.206  Sum_probs=73.0

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCceeecCCCCCccHHHHHHHHc
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFVNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~vi~~~~~~~~~~~~~~~~~  255 (373)
                      +.+..+++++++||.+|+|. |..++.+++..|. +|++++.+++-.+.+    +++|.+.+.....+.   .+..  ..
T Consensus        70 ml~~L~l~~g~~VLeIGsGs-GY~taila~l~g~-~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~---~~g~--~~  142 (215)
T d1jg1a_          70 MLEIANLKPGMNILEVGTGS-GWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILGDG---SKGF--PP  142 (215)
T ss_dssp             HHHHHTCCTTCCEEEECCTT-SHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG---GGCC--GG
T ss_pred             HHHhhccCccceEEEecCCC-ChhHHHHHHhhCc-eeEEEeccHHHHHHHHHHHHHcCCceeEEEECcc---ccCC--cc
Confidence            46778999999999999876 7888888888785 799999987655544    457776643222211   0000  11


Q ss_pred             CCCccEEEEccCChHhHHHHHHHhhcCCcEEEEE
Q 017336          256 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       256 ~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      .+.||.|+...+-+......++.|+++ |+++..
T Consensus       143 ~~pfD~Iiv~~a~~~ip~~l~~qL~~g-GrLv~p  175 (215)
T d1jg1a_         143 KAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIP  175 (215)
T ss_dssp             GCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             cCcceeEEeecccccCCHHHHHhcCCC-CEEEEE
Confidence            237999998877766677889999997 999864

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.61  E-value=4e-05  Score=63.40  Aligned_cols=102  Identities=21%  Similarity=0.256  Sum_probs=72.3

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM  254 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~  254 (373)
                      +.+..+++++++||-+|+|. |..++.+|+..|. .+|++++.+++..+.+++    .+...+.....+.   .+..  .
T Consensus        67 ~l~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~---~~~~--~  140 (213)
T d1dl5a1          67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDG---YYGV--P  140 (213)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG---GGCC--G
T ss_pred             HHHhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCch---HHcc--c
Confidence            45678899999999999877 8888889988763 389999999988777754    4544332111110   0000  1


Q ss_pred             cCCCccEEEEccCChHhHHHHHHHhhcCCcEEEE
Q 017336          255 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVL  288 (373)
Q Consensus       255 ~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~  288 (373)
                      ..+.||+|+...+-....+..++.|+++ |+++.
T Consensus       141 ~~~~fD~I~~~~~~~~~p~~l~~~LkpG-G~lv~  173 (213)
T d1dl5a1         141 EFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIV  173 (213)
T ss_dssp             GGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEE
T ss_pred             cccchhhhhhhccHHHhHHHHHHhcCCC-cEEEE
Confidence            1236999999877656667889999997 99987

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.56  E-value=0.00058  Score=57.71  Aligned_cols=104  Identities=15%  Similarity=0.169  Sum_probs=71.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCceee---cCCCCC--ccHHHHHHHHcCCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFV---NTSEHD--RPIQEVIAEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~vi---~~~~~~--~~~~~~~~~~~~~~~d  260 (373)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++.....   |..+..  ..+.+.+.+.. +++|
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~iD   82 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRL-GTLN   82 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHH-CSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHh-CCCC
Confidence            5789999987 8999999999999999 899999998877655 456654432   222111  11233333333 4799


Q ss_pred             EEEEccCCh-------------------------HhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          261 RSVECTGNI-------------------------DNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       261 ~vid~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +++++.|..                         .....+++.|+..+|+++.+++..
T Consensus        83 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~  140 (253)
T d1hxha_          83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVS  140 (253)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred             eEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchh
Confidence            999998842                         134466777765459999998754

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=0.00048  Score=58.11  Aligned_cols=103  Identities=17%  Similarity=0.175  Sum_probs=69.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc-ee--ecCCCCC--ccHHHHHHHHcCCCccE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DF--VNTSEHD--RPIQEVIAEMTNGGVDR  261 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~-~v--i~~~~~~--~~~~~~~~~~~~~~~d~  261 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+.... ..  .|..+.+  ..+.+.+.+.. +++|+
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~-g~iDi   82 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRF-GRLDC   82 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhc-CCCCE
Confidence            5899999987 8999999999999999 899999999888877653322 22  2322211  11222333333 37999


Q ss_pred             EEEccCCh--------------------------HhHHHHHHHhhcCCcEEEEEcCC
Q 017336          262 SVECTGNI--------------------------DNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       262 vid~~g~~--------------------------~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ++++.|..                          .....+++.|+.++|+++.++..
T Consensus        83 lVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~  139 (250)
T d1ydea1          83 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSL  139 (250)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCH
T ss_pred             EEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccc
Confidence            99988731                          13445666666544899988864

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.55  E-value=0.00013  Score=61.71  Aligned_cols=104  Identities=25%  Similarity=0.169  Sum_probs=73.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCC--ccHHHHHHHHcCCCccEEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHD--RPIQEVIAEMTNGGVDRSV  263 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~--~~~~~~~~~~~~~~~d~vi  263 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+++.+...+ .|..+.+  ..+.+.+.+.. ++.|+++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~iDiLV   81 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYAL-GRVDVLV   81 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHH-SCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhc-CCCCeEE
Confidence            5899999987 8999999999999999 89999999999898888887543 3333221  11333333333 3799999


Q ss_pred             EccCCh-------------------------HhHHHHHHHhhc-CCcEEEEEcCCC
Q 017336          264 ECTGNI-------------------------DNMISAFECVHD-GWGVAVLVGVPS  293 (373)
Q Consensus       264 d~~g~~-------------------------~~~~~~~~~l~~-~~g~~v~~g~~~  293 (373)
                      ++.|..                         .....+++.|.. ++|+++.++...
T Consensus        82 nnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~  137 (248)
T d2d1ya1          82 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQ  137 (248)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred             EeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccc
Confidence            988742                         134455666654 238999888654

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.54  E-value=0.00017  Score=56.39  Aligned_cols=75  Identities=23%  Similarity=0.264  Sum_probs=56.8

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHH-HHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEE
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV  263 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~-~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vi  263 (373)
                      .--.+++|||+|+|.+|.++++.+...|++.++++.|+.+|.+ +++++|.. ++.+++    +.+.+.     .+|+||
T Consensus        20 ~~l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~~~----~~~~l~-----~~Divi   89 (159)
T d1gpja2          20 GSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFDE----LVDHLA-----RSDVVV   89 (159)
T ss_dssp             SCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGGG----HHHHHH-----TCSEEE
T ss_pred             CCcccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccchh----HHHHhc-----cCCEEE
Confidence            3347889999999999999999999999988999999977754 66778864 333222    333332     589999


Q ss_pred             EccCCh
Q 017336          264 ECTGNI  269 (373)
Q Consensus       264 d~~g~~  269 (373)
                      .|++.+
T Consensus        90 ~atss~   95 (159)
T d1gpja2          90 SATAAP   95 (159)
T ss_dssp             ECCSSS
T ss_pred             EecCCC
Confidence            999875

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.46  E-value=0.00011  Score=62.13  Aligned_cols=104  Identities=13%  Similarity=0.160  Sum_probs=69.2

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHh----cC-CceeecCCCCCccHHHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FG-VTDFVNTSEHDRPIQEVIAE  253 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~----lg-~~~vi~~~~~~~~~~~~~~~  253 (373)
                      +....+++||++||=.|+|. |.+++.+|+..|. .+|++++.+++..+.+++    ++ ...+-.... +  +.+   .
T Consensus        77 Ii~~l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~-D--i~~---~  149 (250)
T d1yb2a1          77 IIMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS-D--IAD---F  149 (250)
T ss_dssp             ----CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS-C--TTT---C
T ss_pred             HHHHcCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEe-e--eec---c
Confidence            34568899999999999876 6777788887653 389999999998888765    22 232211111 1  111   0


Q ss_pred             HcCCCccEEEEccC-ChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          254 MTNGGVDRSVECTG-NIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       254 ~~~~~~d~vid~~g-~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ...+.||.|+--.. ....+..+.+.|+|+ |+++.+..
T Consensus       150 ~~~~~fD~V~ld~p~p~~~l~~~~~~LKpG-G~lv~~~P  187 (250)
T d1yb2a1         150 ISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYLP  187 (250)
T ss_dssp             CCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEES
T ss_pred             cccceeeeeeecCCchHHHHHHHHHhcCCC-ceEEEEeC
Confidence            11237998875444 446789999999997 99988744

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.40  E-value=0.00033  Score=58.88  Aligned_cols=79  Identities=20%  Similarity=0.252  Sum_probs=56.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCcee-ecCCCCC--ccHHHHHHHHcCCCccEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDF-VNTSEHD--RPIQEVIAEMTNGGVDRS  262 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~~v-i~~~~~~--~~~~~~~~~~~~~~~d~v  262 (373)
                      +++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. ++++..+ .|..+.+  ..+.+.+.+.. +++|++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iDil   81 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHL-GRLDGV   81 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHH-SSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhc-CCceEE
Confidence            4799999987 8999999999999999 8999999988877664 4666443 3333221  11333333333 379999


Q ss_pred             EEccCC
Q 017336          263 VECTGN  268 (373)
Q Consensus       263 id~~g~  268 (373)
                      +++.|.
T Consensus        82 VnnAG~   87 (242)
T d1ulsa_          82 VHYAGI   87 (242)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            998874

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.40  E-value=9.9e-05  Score=59.82  Aligned_cols=75  Identities=20%  Similarity=0.232  Sum_probs=54.2

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c----CCc-eeecCCCCCccHHHHHHHHcCCCc
Q 017336          187 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVT-DFVNTSEHDRPIQEVIAEMTNGGV  259 (373)
Q Consensus       187 ~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-l----g~~-~vi~~~~~~~~~~~~~~~~~~~~~  259 (373)
                      =+++++||+|+ |++|..++..+...|+ +|+.++++.++.+.+.+ +    ... ...|..+     .+.+.+..+ ++
T Consensus        21 l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~~~-~i   93 (191)
T d1luaa1          21 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD-----DASRAEAVK-GA   93 (191)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS-----HHHHHHHTT-TC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhccchhhhhhhccc-----HHHHHHHhc-Cc
Confidence            37899999997 8999999999999999 89999999888766543 2    221 1233222     233444443 79


Q ss_pred             cEEEEccCC
Q 017336          260 DRSVECTGN  268 (373)
Q Consensus       260 d~vid~~g~  268 (373)
                      |++|++.|.
T Consensus        94 Dilin~Ag~  102 (191)
T d1luaa1          94 HFVFTAGAI  102 (191)
T ss_dssp             SEEEECCCT
T ss_pred             CeeeecCcc
Confidence            999999874

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=0.00059  Score=57.35  Aligned_cols=77  Identities=21%  Similarity=0.286  Sum_probs=54.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCce--eecCCCCCccHHHHHHHHcCCCccEEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSV  263 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~~--vi~~~~~~~~~~~~~~~~~~~~~d~vi  263 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +++...  ..|..+.  +-.+.+.+.. +++|+++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~--~~v~~~~~~~-g~iDilV   81 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGDW--EATERALGSV-GPVDLLV   81 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCH--HHHHHHHTTC-CCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH--HHHHHHHHHh-CCceEEE
Confidence            6899999987 8999999999999999 8999999988877654 344322  2333322  1223332222 3799999


Q ss_pred             EccCC
Q 017336          264 ECTGN  268 (373)
Q Consensus       264 d~~g~  268 (373)
                      ++.|.
T Consensus        82 nnAg~   86 (244)
T d1pr9a_          82 NNAAV   86 (244)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            98874

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=0.00033  Score=58.99  Aligned_cols=79  Identities=18%  Similarity=0.215  Sum_probs=56.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+.........+-...+..+...+..+ +.|+++++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~id~lVn~a   82 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVE-RLDVLFNVA   82 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCS-CCSEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccc-cceeEEecc
Confidence            5789999987 8999999999999999 899999999887777664332222222222234444444433 799999988


Q ss_pred             CC
Q 017336          267 GN  268 (373)
Q Consensus       267 g~  268 (373)
                      |.
T Consensus        83 g~   84 (245)
T d2ag5a1          83 GF   84 (245)
T ss_dssp             CC
T ss_pred             cc
Confidence            75

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.34  E-value=0.0007  Score=57.37  Aligned_cols=80  Identities=21%  Similarity=0.326  Sum_probs=56.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~--~~~~~~~~~~~~~  257 (373)
                      +||++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+    ++.+... .  .|..+.+  ..+.+.+.+..++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g   83 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   83 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            6899999987 8999999999999999 899999998776544    3455543 2  2332221  1133344555555


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ..|+++++.|.
T Consensus        84 ~idilinnag~   94 (258)
T d1ae1a_          84 KLNILVNNAGV   94 (258)
T ss_dssp             CCCEEEECCCC
T ss_pred             CcEEEeccccc
Confidence            79999998885

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.26  E-value=0.00091  Score=56.06  Aligned_cols=77  Identities=18%  Similarity=0.214  Sum_probs=53.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCC-ce-eecCCCCCccHHHHHHHHcCCCccEEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGV-TD-FVNTSEHDRPIQEVIAEMTNGGVDRSV  263 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~-~~-vi~~~~~~~~~~~~~~~~~~~~~d~vi  263 (373)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++++.+. +++. .. ..|..+.  +-.+.+.+.. +++|+++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~--~~v~~~~~~~-g~iDilV   79 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW--DATEKALGGI-GPVDLLV   79 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCH--HHHHHHHTTC-CCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH--HHHHHHHHHc-CCCeEEE
Confidence            5899999987 8999999999999999 8999999988776554 4433 22 2233322  1222222222 3799999


Q ss_pred             EccCC
Q 017336          264 ECTGN  268 (373)
Q Consensus       264 d~~g~  268 (373)
                      ++.|.
T Consensus        80 nnAg~   84 (242)
T d1cyda_          80 NNAAL   84 (242)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            98874

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.25  E-value=0.0011  Score=55.56  Aligned_cols=103  Identities=22%  Similarity=0.298  Sum_probs=68.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCce---eecCCCCC--ccHHHHHHHHcCCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD---FVNTSEHD--RPIQEVIAEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~~---vi~~~~~~--~~~~~~~~~~~~~~~d  260 (373)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +++...   ..|..+.+  ..+.+.+.+.. ++.|
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   80 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEF-GEVD   80 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHT-CSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhccc-CCcc
Confidence            5789999987 8999999999999999 8999999988876654 455432   23332221  11223333333 3799


Q ss_pred             EEEEccCCh-------------------------HhHHHHHHHhhc-CCcEEEEEcCC
Q 017336          261 RSVECTGNI-------------------------DNMISAFECVHD-GWGVAVLVGVP  292 (373)
Q Consensus       261 ~vid~~g~~-------------------------~~~~~~~~~l~~-~~g~~v~~g~~  292 (373)
                      +++++.|..                         .....+++.|.. ++|+++.+++.
T Consensus        81 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~  138 (243)
T d1q7ba_          81 ILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSV  138 (243)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             eehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecch
Confidence            999988742                         133455666532 23999999864

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.25  E-value=0.00081  Score=53.06  Aligned_cols=77  Identities=17%  Similarity=0.178  Sum_probs=53.7

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCc---eeecCCCCCccHHHHHHHHc
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT---DFVNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~---~vi~~~~~~~~~~~~~~~~~  255 (373)
                      |.+..-..++++|||+|+|+.+.+++..+..+|+ +++++.|+.+|.+.+.+ +...   ..+..++           ..
T Consensus         9 l~~~~~~~~~k~vlIlGaGGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~-----------~~   76 (170)
T d1nyta1           9 LERLSFIRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSMDE-----------LE   76 (170)
T ss_dssp             HHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCSGG-----------GT
T ss_pred             HHHcCCCCCCCEEEEECCcHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhccccccccccc-----------cc
Confidence            3333334578999999999999999999999999 79999999888776644 3221   1121111           11


Q ss_pred             CCCccEEEEccCC
Q 017336          256 NGGVDRSVECTGN  268 (373)
Q Consensus       256 ~~~~d~vid~~g~  268 (373)
                      ...+|++|+|+..
T Consensus        77 ~~~~dliIN~Tp~   89 (170)
T d1nyta1          77 GHEFDLIINATSS   89 (170)
T ss_dssp             TCCCSEEEECCSC
T ss_pred             ccccceeeccccc
Confidence            1368999999865

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.23  E-value=0.0015  Score=51.45  Aligned_cols=95  Identities=11%  Similarity=0.031  Sum_probs=64.3

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      +++|||+|+|.+|..+++.+...|. .|++++++.++.+.+.+ ++...+.......  . ....... ...|.++.+..
T Consensus         2 ~K~IliiGaG~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~--~-~~~~~~i-~~~~~~i~~~~   76 (182)
T d1e5qa1           2 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDVND--D-AALDAEV-AKHDLVISLIP   76 (182)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTC--H-HHHHHHH-TTSSEEEECSC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhcccccccccccccc--h-hhhHhhh-hccceeEeecc
Confidence            6899999999999999999999999 89999999999888765 4433332222221  1 1122221 25788888887


Q ss_pred             ChHhHHHHHHHhhcCCcEEEEE
Q 017336          268 NIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       268 ~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      .......+..++..+ -.++..
T Consensus        77 ~~~~~~~~~~~~~~~-~~~~~~   97 (182)
T d1e5qa1          77 YTFHATVIKSAIRQK-KHVVTT   97 (182)
T ss_dssp             GGGHHHHHHHHHHHT-CEEECS
T ss_pred             chhhhHHHHHHHhhc-cceeec
Confidence            755555666666664 555544

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.21  E-value=0.00059  Score=58.03  Aligned_cols=104  Identities=19%  Similarity=0.255  Sum_probs=73.2

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM  254 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~  254 (373)
                      +...++++||++||=.|+|. |.+++.+|+..|. .+|++++.+++..+.+++    +|....+.....+      +...
T Consensus        95 Ii~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d------~~~~  167 (266)
T d1o54a_          95 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRD------ISEG  167 (266)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCC------GGGC
T ss_pred             HHHhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEecc------cccc
Confidence            45678999999999999876 7778888888753 289999999998887754    5542211111111      1111


Q ss_pred             cC-CCccEEEEccCCh-HhHHHHHHHhhcCCcEEEEEcC
Q 017336          255 TN-GGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       255 ~~-~~~d~vid~~g~~-~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      .. ..+|.|+--...+ ..++.+.+.|+|+ |+++.+..
T Consensus       168 ~~~~~~D~V~~d~p~p~~~l~~~~~~LKpG-G~lv~~~P  205 (266)
T d1o54a_         168 FDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVCP  205 (266)
T ss_dssp             CSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEES
T ss_pred             ccccceeeeEecCCCHHHHHHHHHhhcCCC-CEEEEEeC
Confidence            22 2688877666654 6789999999997 99987643

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.19  E-value=0.0012  Score=55.89  Aligned_cols=105  Identities=18%  Similarity=0.244  Sum_probs=68.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCcee---ecCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDF---VNTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~v---i~~~~~~--~~~~~~~~~~~~~  257 (373)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+.    +.|....   .|..+.+  ..+.+.+.+..++
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   85 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   85 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            5899999987 8999999999999999 8999999988766543    3444332   2322211  1123333333444


Q ss_pred             CccEEEEccCCh-------------------------HhHHHHHHHhhc-CCcEEEEEcCCC
Q 017336          258 GVDRSVECTGNI-------------------------DNMISAFECVHD-GWGVAVLVGVPS  293 (373)
Q Consensus       258 ~~d~vid~~g~~-------------------------~~~~~~~~~l~~-~~g~~v~~g~~~  293 (373)
                      ++|+++++.|..                         .....+.+.|.. ++|+++.+++..
T Consensus        86 ~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~  147 (259)
T d2ae2a_          86 KLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVS  147 (259)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGG
T ss_pred             CceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccc
Confidence            799999998842                         122344454432 348999998753

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.17  E-value=0.001  Score=57.32  Aligned_cols=103  Identities=17%  Similarity=0.188  Sum_probs=72.1

Q ss_pred             hhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCceeecCCCCCccHHHHHHHH
Q 017336          179 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEM  254 (373)
Q Consensus       179 ~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~vi~~~~~~~~~~~~~~~~  254 (373)
                      .+.+++++++|++||=+|+|- |..++.+|+..|+ +|++++.++++.+.++    +.|....+.....+  .     ..
T Consensus        52 ~~~~~l~l~~G~~VLDiGCG~-G~~~~~~a~~~g~-~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d--~-----~~  122 (291)
T d1kpia_          52 LALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQG--W-----EE  122 (291)
T ss_dssp             HHHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECC--G-----GG
T ss_pred             HHHHhcCCCCCCEEEEecCcc-hHHHHHHHHhcCc-ceeeccchHHHHHHHHHHHHhhccchhhhhhhhc--c-----cc
Confidence            356889999999999999874 4457788899999 8999999998866654    45654322211111  1     12


Q ss_pred             cCCCccEEEEc-----cCC----------hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          255 TNGGVDRSVEC-----TGN----------IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       255 ~~~~~d~vid~-----~g~----------~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..+.||.|+..     ++.          +.++..+.++|+|+ |++++-..
T Consensus       123 ~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~Lkpg-G~~~l~~i  173 (291)
T d1kpia_         123 FDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTI  173 (291)
T ss_dssp             CCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTT-CEEEEEEE
T ss_pred             cccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCC-CceEEEEE
Confidence            23479998863     332          25688999999997 99987544

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.15  E-value=0.00026  Score=58.65  Aligned_cols=99  Identities=20%  Similarity=0.277  Sum_probs=69.2

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC--ce--eecCCCCCccHHHHHHHHc
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--TD--FVNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~--~~--vi~~~~~~~~~~~~~~~~~  255 (373)
                      +.+...++++++||-+|+|. |..++.+++.. . +|++++.+++..+.+++.-.  ..  ++.-+. ...+      ..
T Consensus        62 ml~~L~l~~g~~VLdIG~Gs-Gy~ta~La~l~-~-~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~-~~g~------~~  131 (224)
T d1vbfa_          62 MLDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGDG-TLGY------EE  131 (224)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESCG-GGCC------GG
T ss_pred             HHHHhhhcccceEEEecCCC-CHHHHHHHHHh-c-ccccccccHHHHHHHHHHHhcccccccccCch-hhcc------hh
Confidence            45678899999999999874 77777777764 4 89999999988888876311  11  221111 0001      11


Q ss_pred             CCCccEEEEccCChHhHHHHHHHhhcCCcEEEEE
Q 017336          256 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       256 ~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      .+.||+|+-..+-+......++.|+++ |+++..
T Consensus       132 ~~pfD~Iiv~~a~~~ip~~l~~qLk~G-GrLV~p  164 (224)
T d1vbfa_         132 EKPYDRVVVWATAPTLLCKPYEQLKEG-GIMILP  164 (224)
T ss_dssp             GCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             hhhHHHHHhhcchhhhhHHHHHhcCCC-CEEEEE
Confidence            237999998776666677889999997 998874

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.13  E-value=0.0028  Score=50.18  Aligned_cols=89  Identities=19%  Similarity=0.163  Sum_probs=58.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCC----CccHHHHHHHHcCCCccEEEE
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH----DRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~----~~~~~~~~~~~~~~~~d~vid  264 (373)
                      .++|.|+|+|.+|++.+..+...|. .|.++++++++.+.+++.+..........    .......+.+.. ..+|++|-
T Consensus         1 sk~iaIiGaG~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~aD~iii   78 (184)
T d1bg6a2           1 SKTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV-KDADVILI   78 (184)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH-TTCSEEEE
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHh-cCCCEEEE
Confidence            3789999999999999999999998 89999999999999887664322111000    000000122222 25899999


Q ss_pred             ccCChHhHHHHHHHhh
Q 017336          265 CTGNIDNMISAFECVH  280 (373)
Q Consensus       265 ~~g~~~~~~~~~~~l~  280 (373)
                      ++... .....++.++
T Consensus        79 ~v~~~-~~~~~~~~i~   93 (184)
T d1bg6a2          79 VVPAI-HHASIAANIA   93 (184)
T ss_dssp             CSCGG-GHHHHHHHHG
T ss_pred             EEchh-HHHHHHHHhh
Confidence            99874 3444444444

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.10  E-value=0.0013  Score=49.36  Aligned_cols=75  Identities=13%  Similarity=0.258  Sum_probs=56.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      ++++|+|.|.+|..+++.+...|. .|++++.++++.+.+++.+...++- +..+.+.   +.+..-..+|.++-++++.
T Consensus         1 k~~iIiG~G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~~~~~~~g-d~~~~~~---l~~a~i~~a~~vi~~~~~~   75 (134)
T d2hmva1           1 KQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVIA-NATEENE---LLSLGIRNFEYVIVAIGAN   75 (134)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTTCSEEEEC-CTTCTTH---HHHHTGGGCSEEEECCCSC
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHhCCcceee-ecccchh---hhccCCccccEEEEEcCch
Confidence            468899999999999999999999 8999999999999998888765442 2222223   3333222688888888764

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.09  E-value=0.0015  Score=54.80  Aligned_cols=79  Identities=14%  Similarity=0.170  Sum_probs=54.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCcee---ecCCCCC--ccHHHHHHHHcCCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDF---VNTSEHD--RPIQEVIAEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~~v---i~~~~~~--~~~~~~~~~~~~~~~d  260 (373)
                      +|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+. +++....   .|..+.+  ..+.+.+.+.. +++|
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   82 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAF-GGLH   82 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHh-CCCe
Confidence            5799999987 8999999999999999 8999999988876654 4543322   2322221  11333333333 3799


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      +++++.|.
T Consensus        83 ilinnAG~   90 (244)
T d1nffa_          83 VLVNNAGI   90 (244)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999885

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.09  E-value=0.0012  Score=55.94  Aligned_cols=105  Identities=21%  Similarity=0.230  Sum_probs=66.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce---eecCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD---FVNTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~---vi~~~~~~--~~~~~~~~~~~~~  257 (373)
                      +|+++||+|+ +++|.+++..+...|+ +|+.+++++++++.+.    +.+...   ..|..+.+  ..+.+.+.+..++
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   85 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   85 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCC
Confidence            5899999987 8999999999999999 8999999988766543    233322   12332221  1133334444455


Q ss_pred             CccEEEEccCCh-------------------------HhHHHHHHHhhc-CCcEEEEEcCCC
Q 017336          258 GVDRSVECTGNI-------------------------DNMISAFECVHD-GWGVAVLVGVPS  293 (373)
Q Consensus       258 ~~d~vid~~g~~-------------------------~~~~~~~~~l~~-~~g~~v~~g~~~  293 (373)
                      .+|+++++.|..                         .....+++.|.. ++|+++.++...
T Consensus        86 ~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~  147 (259)
T d1xq1a_          86 KLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIA  147 (259)
T ss_dssp             CCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---
T ss_pred             CcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccc
Confidence            799999998852                         123344454532 348999988754

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=0.0015  Score=55.67  Aligned_cols=104  Identities=18%  Similarity=0.236  Sum_probs=66.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-----cCCce-eecCCCCCccHHH----HHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTD-FVNTSEHDRPIQE----VIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-----lg~~~-vi~~~~~~~~~~~----~~~~~~~  256 (373)
                      +|+++||+|+ +++|.+.+..+...|+ +|+.+++++++++.+.+     .+... .+..+..+....+    .+.+.. 
T Consensus        13 ~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-   90 (269)
T d1xu9a_          13 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM-   90 (269)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh-
Confidence            5899999998 7999999999999999 89999999988776643     23322 2222222211222    222222 


Q ss_pred             CCccEEEEccCCh-------------------------HhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          257 GGVDRSVECTGNI-------------------------DNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       257 ~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +..|+++++.|..                         ......+..|+.++|+++.++...
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~  152 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLA  152 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGG
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccch
Confidence            3689988876642                         123344455554348888887654

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.08  E-value=0.0015  Score=56.05  Aligned_cols=102  Identities=17%  Similarity=0.135  Sum_probs=71.1

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHc
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~  255 (373)
                      +.+++++++|++||=+|+|- |..++.+|+..|+ +|++++.++++.+.+++    .|...-+.....+  +     ...
T Consensus        54 ~~~~l~l~~G~~VLDiGCG~-G~~a~~~a~~~g~-~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d--~-----~~~  124 (285)
T d1kpga_          54 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAG--W-----EQF  124 (285)
T ss_dssp             HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESC--G-----GGC
T ss_pred             HHHHcCCCCCCEEEEecCcc-hHHHHHHHhcCCc-ceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhh--h-----hcc
Confidence            56788999999999999875 6678889999999 99999999998887755    3322111111111  1     112


Q ss_pred             CCCccEEEE-----ccCC---hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          256 NGGVDRSVE-----CTGN---IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       256 ~~~~d~vid-----~~g~---~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ++.+|.|+.     .++.   ..++..+.++|+|+ |++++...
T Consensus       125 ~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~Lkpg-G~~~l~~i  167 (285)
T d1kpga_         125 DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHTI  167 (285)
T ss_dssp             CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred             cccccceeeehhhhhcCchhHHHHHHHHHhhcCCC-CcEEEEEE
Confidence            347888776     3332   25688899999997 99986543

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.05  E-value=0.0017  Score=54.80  Aligned_cols=79  Identities=24%  Similarity=0.301  Sum_probs=54.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCcee---ecCCCCC--ccHHHHHHHHcCCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF---VNTSEHD--RPIQEVIAEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~v---i~~~~~~--~~~~~~~~~~~~~~~d  260 (373)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++....   .|..+.+  ..+.+.+.+.. +++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   81 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEF-GSVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHc-CCcc
Confidence            5899999987 7999999999999999 899999998776655 45654321   2322211  11333333333 3799


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      +++++.|.
T Consensus        82 ilVnnAg~   89 (254)
T d1hdca_          82 GLVNNAGI   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEecCcc
Confidence            99998874

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.05  E-value=0.0062  Score=44.12  Aligned_cols=93  Identities=15%  Similarity=0.011  Sum_probs=62.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC--hhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS--SKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~--~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      .+++|||+|+|.+|..-++.+...|+ .|++++..  ++-..++++-... .+...-...++         .++++|+-+
T Consensus        11 ~~k~vlVvG~G~va~~ka~~ll~~ga-~v~v~~~~~~~~~~~~~~~~~i~-~~~~~~~~~dl---------~~~~lv~~a   79 (113)
T d1pjqa1          11 RDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIPQFTVWANEGMLT-LVEGPFDETLL---------DSCWLAIAA   79 (113)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCHHHHHHHTTTSCE-EEESSCCGGGG---------TTCSEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeccCChHHHHHHhcCCce-eeccCCCHHHh---------CCCcEEeec
Confidence            47899999999999999999999999 77777553  3333344332232 22111111011         268999999


Q ss_pred             cCChHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          266 TGNIDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       266 ~g~~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ++.++.-....+..++. |..+.+.+.
T Consensus        80 t~d~~~n~~i~~~a~~~-~ilVNv~D~  105 (113)
T d1pjqa1          80 TDDDTVNQRVSDAAESR-RIFCNVVDA  105 (113)
T ss_dssp             CSCHHHHHHHHHHHHHT-TCEEEETTC
T ss_pred             CCCHHHHHHHHHHHHHc-CCEEEeCCC
Confidence            99866655777777775 888887654

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=97.00  E-value=0.00039  Score=58.43  Aligned_cols=103  Identities=22%  Similarity=0.236  Sum_probs=69.6

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHc
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~  255 (373)
                      +....++.|+++||=+|+|. |..+..+++..|+ +|++++.+++..+.+++    .|...-+.....+  +.+ +  ..
T Consensus        25 l~~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~-~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d--~~~-~--~~   97 (245)
T d1nkva_          25 LGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHND--AAG-Y--VA   97 (245)
T ss_dssp             HHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC--CTT-C--CC
T ss_pred             HHHHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCC-EEEEEecccchhhHHHHHHHHhhccccchhhhhH--Hhh-c--cc
Confidence            55778999999999999865 5567778888898 89999999988776654    4543211111111  000 0  12


Q ss_pred             CCCccEEEEcc------CChHhHHHHHHHhhcCCcEEEEEc
Q 017336          256 NGGVDRSVECT------GNIDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       256 ~~~~d~vid~~------g~~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      .+.||+|+..-      .-...+..+.+.|+|+ |++++..
T Consensus        98 ~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPG-G~l~i~~  137 (245)
T d1nkva_          98 NEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGE  137 (245)
T ss_dssp             SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEE
T ss_pred             cCceeEEEEEehhhccCCHHHHHHHHHHHcCcC-cEEEEEe
Confidence            23799998632      2236788899999997 9988753

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.00  E-value=0.0015  Score=55.18  Aligned_cols=79  Identities=18%  Similarity=0.216  Sum_probs=55.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCcee---ecCCCCC--ccHHHHHHHHcCCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF---VNTSEHD--RPIQEVIAEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~v---i~~~~~~--~~~~~~~~~~~~~~~d  260 (373)
                      +|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ +++|....   .|..+.+  ..+.+.+.+.. +++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~-g~iD   81 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRW-GSID   81 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHh-CCcc
Confidence            4789999987 8999999999999999 899999998776654 55775432   2332221  11222333333 3799


Q ss_pred             EEEEccCC
Q 017336          261 RSVECTGN  268 (373)
Q Consensus       261 ~vid~~g~  268 (373)
                      +++++.|.
T Consensus        82 ilVnnAg~   89 (256)
T d1k2wa_          82 ILVNNAAL   89 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEeeccc
Confidence            99999884

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.99  E-value=0.0022  Score=53.93  Aligned_cols=103  Identities=24%  Similarity=0.352  Sum_probs=68.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-----HhcCCcee---ecCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-----KKFGVTDF---VNTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-----~~lg~~~v---i~~~~~~--~~~~~~~~~~~~  256 (373)
                      +++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+     ++.|....   .|..+.+  ..+.+.+.+.. 
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   81 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF-   81 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            4789999987 8999999999999999 899999988765433     34565432   2332221  11333333333 


Q ss_pred             CCccEEEEccCCh-------------------------HhHHHHHHHhhc-CCcEEEEEcCC
Q 017336          257 GGVDRSVECTGNI-------------------------DNMISAFECVHD-GWGVAVLVGVP  292 (373)
Q Consensus       257 ~~~d~vid~~g~~-------------------------~~~~~~~~~l~~-~~g~~v~~g~~  292 (373)
                      +++|+++++.|..                         ...+.+++.|.. ++|+++.++..
T Consensus        82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~  143 (251)
T d1vl8a_          82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSL  143 (251)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCG
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccc
Confidence            3799999998842                         134456677744 23799988764

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.99  E-value=0.0025  Score=52.92  Aligned_cols=72  Identities=22%  Similarity=0.237  Sum_probs=52.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      +++++||+|+ +++|.++++.+...|+ +|+.+++++++.   ++.+...+ .|..+    ..+.+.+.. +++|+++++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~l---~~~~~~~~~~Dv~~----~~~~~~~~~-g~iD~lVnn   73 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELL---KRSGHRYVVCDLRK----DLDLLFEKV-KEVDILVLN   73 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH---HHTCSEEEECCTTT----CHHHHHHHS-CCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHH---HhcCCcEEEcchHH----HHHHHHHHh-CCCcEEEec
Confidence            5799999987 8999999999999999 899999887654   45555443 23322    223344443 379999998


Q ss_pred             cCC
Q 017336          266 TGN  268 (373)
Q Consensus       266 ~g~  268 (373)
                      .|.
T Consensus        74 AG~   76 (234)
T d1o5ia_          74 AGG   76 (234)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            874

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=96.99  E-value=0.0015  Score=55.82  Aligned_cols=78  Identities=19%  Similarity=0.308  Sum_probs=54.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCcee---ecCCCCC--ccHHHHHHHHcCCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF---VNTSEHD--RPIQEVIAEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~v---i~~~~~~--~~~~~~~~~~~~~~~d  260 (373)
                      +|+++||+|+ +++|.+++..+...|+ +|+.+++++++++.+ ++++....   .|..+.+  ..+.+.+.+.. +++|
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~id   81 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARF-GKID   81 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHh-CCcc
Confidence            5899999987 8999999999999999 899999998887655 44554332   2322211  11222233333 3799


Q ss_pred             EEEEccC
Q 017336          261 RSVECTG  267 (373)
Q Consensus       261 ~vid~~g  267 (373)
                      +++++.|
T Consensus        82 ilvnnAG   88 (276)
T d1bdba_          82 TLIPNAG   88 (276)
T ss_dssp             EEECCCC
T ss_pred             ccccccc
Confidence            9999887

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.97  E-value=0.00019  Score=60.11  Aligned_cols=99  Identities=17%  Similarity=0.250  Sum_probs=62.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCC----ccHHHHHHHHcCC-CccE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD----RPIQEVIAEMTNG-GVDR  261 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~----~~~~~~~~~~~~~-~~d~  261 (373)
                      .+++|||+|+ +++|.+.++.+...|+ +|+.+++.+.+..     .....+......    ..+...+.+.... ++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccc-----cccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            4799999997 8999999999999999 8988877654311     111111111111    1122333333333 7999


Q ss_pred             EEEccCCh--------------------------HhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          262 SVECTGNI--------------------------DNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       262 vid~~g~~--------------------------~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      ++++.|..                          .....+++.|+++ |+++.++...
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-G~Iv~isS~~  131 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG-GLLTLAGAKA  131 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCGG
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc-cceeEEccHH
Confidence            99988731                          1233456667776 9999998754

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.00034  Score=57.98  Aligned_cols=99  Identities=17%  Similarity=0.164  Sum_probs=67.0

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHh----cCCc-----eeecCCCCCccHHHHHHH
Q 017336          184 AKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVT-----DFVNTSEHDRPIQEVIAE  253 (373)
Q Consensus       184 ~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~----lg~~-----~vi~~~~~~~~~~~~~~~  253 (373)
                      ..+++|++||-+|+|. |..++.+|+..|. .+|++++.+++-.+.+++    .+..     .+.... .+  ..+.  .
T Consensus        72 ~~l~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~-gD--~~~~--~  145 (224)
T d1i1na_          72 DQLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVV-GD--GRMG--Y  145 (224)
T ss_dssp             TTSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEE-SC--GGGC--C
T ss_pred             hccCCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEE-ee--cccc--c
Confidence            3789999999999876 7888888887763 389999999887776643    2221     111000 01  0000  0


Q ss_pred             HcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEE
Q 017336          254 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       254 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      ...+.||+|+.+..-+...+..++.|+++ |+++..
T Consensus       146 ~~~~~fD~I~~~~~~~~ip~~l~~~LkpG-G~LV~p  180 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILP  180 (224)
T ss_dssp             GGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             chhhhhhhhhhhcchhhcCHHHHhhcCCC-cEEEEE
Confidence            11237999998877667778899999997 999873

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.96  E-value=0.0023  Score=54.73  Aligned_cols=102  Identities=17%  Similarity=0.178  Sum_probs=70.1

Q ss_pred             hhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHH
Q 017336          179 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM  254 (373)
Q Consensus       179 ~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~  254 (373)
                      .+.+..++++|++||=+|+|. |..+..+++..|+ +|++++.+++..+.+++    .|....+.....+  .     ..
T Consensus        43 ~~~~~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~-~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d--~-----~~  113 (280)
T d2fk8a1          43 LNLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQG--W-----ED  113 (280)
T ss_dssp             HHHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC--G-----GG
T ss_pred             HHHHHcCCCCCCEEEEecCCc-hHHHHHHHHhCce-eEEEecchHHHHHHHHHHHHhhccccchhhhhhh--h-----hh
Confidence            456778999999999999874 3456778888899 89999999998877754    3443211111111  1     11


Q ss_pred             cCCCccEEEEc-----cCC---hHhHHHHHHHhhcCCcEEEEEc
Q 017336          255 TNGGVDRSVEC-----TGN---IDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       255 ~~~~~d~vid~-----~g~---~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      ..+.||.|+..     ++.   +.++....++|+|+ |++++-.
T Consensus       114 ~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~Lkpg-G~~~i~~  156 (280)
T d2fk8a1         114 FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQS  156 (280)
T ss_dssp             CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEE
T ss_pred             hccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCC-ceEEEEE
Confidence            23478988753     332   25688899999997 9998754

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.94  E-value=0.0034  Score=49.91  Aligned_cols=43  Identities=23%  Similarity=0.407  Sum_probs=36.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA  229 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~  229 (373)
                      -.+++|||+|+|+++.+++..+...|++.++.+.++.++.+.+
T Consensus        16 l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~   58 (182)
T d1vi2a1          16 IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKA   58 (182)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHH
T ss_pred             cCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHH
Confidence            3678999999999999999999999998999999987665543

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.92  E-value=0.001  Score=55.97  Aligned_cols=80  Identities=18%  Similarity=0.235  Sum_probs=54.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCc-EEEEEcCChhHHHHHHhcCCce--e--ecCCCCC--ccHHHHHHHHcCC-Cc
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKFGVTD--F--VNTSEHD--RPIQEVIAEMTNG-GV  259 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~-~V~~~~~~~~~~~~~~~lg~~~--v--i~~~~~~--~~~~~~~~~~~~~-~~  259 (373)
                      .++|||+|+ +++|++.++.+...|+. .|+.+.++.++.+.+++.....  +  .|..+.+  ..+.+.+.+..+. +.
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            489999998 89999988888778863 6888889998888877754322  2  2332211  1234444444444 69


Q ss_pred             cEEEEccCC
Q 017336          260 DRSVECTGN  268 (373)
Q Consensus       260 d~vid~~g~  268 (373)
                      |+++++.|.
T Consensus        83 dilinnAG~   91 (250)
T d1yo6a1          83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             EEEEEcCcc
Confidence            999999884

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=96.92  E-value=0.0015  Score=55.27  Aligned_cols=79  Identities=23%  Similarity=0.291  Sum_probs=54.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCcee---ecCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDF---VNTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~v---i~~~~~~--~~~~~~~~~~~~~  257 (373)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+.    +.|.+..   .|..+.+  ..+.+.+.+.. +
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   81 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-G   81 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence            5899999987 8999999999999999 8999999988776543    3454432   2322221  12333333333 3


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|+++++.|.
T Consensus        82 ~iDilVnnaG~   92 (260)
T d1zema1          82 KIDFLFNNAGY   92 (260)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCeehhhhcc
Confidence            79999998773

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.90  E-value=0.002  Score=54.25  Aligned_cols=79  Identities=19%  Similarity=0.304  Sum_probs=54.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCcee---ecCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~v---i~~~~~~--~~~~~~~~~~~~~  257 (373)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|....   .|..+.+  ..+.+.+.+.. +
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~-g   87 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL-G   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            5899999987 8999999999999999 899999998776554    44555432   2222211  11223333333 3


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|+++++.|.
T Consensus        88 ~iDilvnnAG~   98 (255)
T d1fmca_          88 KVDILVNNAGG   98 (255)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEeeeCCcC
Confidence            79999999875

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.89  E-value=0.0032  Score=52.53  Aligned_cols=103  Identities=23%  Similarity=0.300  Sum_probs=68.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCcee---ecCCCCC--ccHHHHHHHHcCCCcc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF---VNTSEHD--RPIQEVIAEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~v---i~~~~~~--~~~~~~~~~~~~~~~d  260 (373)
                      .|+++||+|+ +++|.+.++-+...|+ +|+.+++++++.+.+ ++++.+..   .|..+.+  ..+.+.+.+.. +++|
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~-g~iD   81 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEF-GRLH   81 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHh-CCcc
Confidence            5899999987 7999999999999999 899999998876555 45775432   2332211  11222333333 3799


Q ss_pred             EEEEccCCh-------------------------HhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          261 RSVECTGNI-------------------------DNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       261 ~vid~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +++++.|..                         .........+..+ +.++..+...
T Consensus        82 iLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~-~~i~~~ss~a  138 (241)
T d2a4ka1          82 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG-GSLVLTGSVA  138 (241)
T ss_dssp             EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT-CEEEEECCCT
T ss_pred             Eeccccccccccchhhhhccccccccccccccccccccccccccccc-cceeeccccc
Confidence            999987742                         1233455666665 7777666544

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.84  E-value=0.0035  Score=48.86  Aligned_cols=85  Identities=21%  Similarity=0.286  Sum_probs=58.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC-ceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~-~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      +|.|+|+|.+|...+..++..|. +|++.++++++.+.+++.|. +...+..+           .. ...|+||-++.. 
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~~~~~~~~~~~-----------~~-~~~DiIilavp~-   67 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQDLS-----------LL-QTAKIIFLCTPI-   67 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEESCGG-----------GG-TTCSEEEECSCH-
T ss_pred             EEEEEeecHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhhccceeeeecc-----------cc-cccccccccCcH-
Confidence            58899999999998888889998 89999999999999999885 33322111           11 268999998864 


Q ss_pred             HhHHHHHHHh----hcCCcEEEEEc
Q 017336          270 DNMISAFECV----HDGWGVAVLVG  290 (373)
Q Consensus       270 ~~~~~~~~~l----~~~~g~~v~~g  290 (373)
                      ......++.+    .++ ..++.++
T Consensus        68 ~~~~~vl~~l~~~l~~~-~iv~~~~   91 (165)
T d2f1ka2          68 QLILPTLEKLIPHLSPT-AIVTDVA   91 (165)
T ss_dssp             HHHHHHHHHHGGGSCTT-CEEEECC
T ss_pred             hhhhhhhhhhhhhcccc-cceeecc
Confidence            3334444444    443 4444443

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.83  E-value=0.003  Score=53.56  Aligned_cols=78  Identities=18%  Similarity=0.279  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCC---ceee--cCCCCC--ccHHHHHHHHcCCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGV---TDFV--NTSEHD--RPIQEVIAEMTNGG  258 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~---~~vi--~~~~~~--~~~~~~~~~~~~~~  258 (373)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++.   ...+  |..+.+  ..+.+.+.+.. ++
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~   82 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKH-GK   82 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence            5799999987 8999999999999999 8999999988877654 3432   1122  322211  11222233333 37


Q ss_pred             ccEEEEccC
Q 017336          259 VDRSVECTG  267 (373)
Q Consensus       259 ~d~vid~~g  267 (373)
                      +|+++++.|
T Consensus        83 iD~lVnnAG   91 (268)
T d2bgka1          83 LDIMFGNVG   91 (268)
T ss_dssp             CCEEEECCC
T ss_pred             cceeccccc
Confidence            999999887

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.81  E-value=0.0022  Score=53.69  Aligned_cols=105  Identities=17%  Similarity=0.189  Sum_probs=68.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCcee---ecCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDF---VNTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~v---i~~~~~~--~~~~~~~~~~~~~  257 (373)
                      .|+++||+|+ +++|...+..+...|+ +|+.+++++++++.+.    +.|....   .|..+.+  ..+.+.+.+.. +
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~-g   83 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI-G   83 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-C
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc-C
Confidence            5899999998 7999998888889999 8999999998876553    3554322   2332221  11222233332 3


Q ss_pred             CccEEEEccCCh-------------------------HhHHHHHHHhhc-CCcEEEEEcCCCC
Q 017336          258 GVDRSVECTGNI-------------------------DNMISAFECVHD-GWGVAVLVGVPSK  294 (373)
Q Consensus       258 ~~d~vid~~g~~-------------------------~~~~~~~~~l~~-~~g~~v~~g~~~~  294 (373)
                      ..|+++++.|..                         .....+++.|.. ++|+++.+++...
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~  146 (244)
T d1yb1a_          84 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG  146 (244)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-
T ss_pred             CCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchh
Confidence            799999998853                         123345555533 3488998887654

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.81  E-value=0.0069  Score=51.34  Aligned_cols=102  Identities=20%  Similarity=0.206  Sum_probs=65.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCC-hhHHH----HHHhcCCceee-cCCCCC-cc---HHHHHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS-SKRFE----EAKKFGVTDFV-NTSEHD-RP---IQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~-~~~~~----~~~~lg~~~vi-~~~~~~-~~---~~~~~~~~~~  256 (373)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.++++ ++..+    .+++.+.+... ..+-.+ .+   +.+.+.+.. 
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~-   94 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF-   94 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh-
Confidence            4799999987 8999999999999999 78887665 44433    33455654422 112112 11   222333333 


Q ss_pred             CCccEEEEccCCh-------------------------HhHHHHHHHhhcCCcEEEEEcCC
Q 017336          257 GGVDRSVECTGNI-------------------------DNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       257 ~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ++.|+++++.|..                         .....+...|..+ |+++.++..
T Consensus        95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-g~~i~i~s~  154 (272)
T d1g0oa_          95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSI  154 (272)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCG
T ss_pred             CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc-ccccccccc
Confidence            3799999988752                         1345667777776 888888754

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.80  E-value=0.0091  Score=44.46  Aligned_cols=74  Identities=16%  Similarity=0.204  Sum_probs=55.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      +|+|+|.|.+|...++.+...|. .|++++.++++.+.+++ ++...+. -+..+   .+.+++..-..+|.++-++++.
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~~~~vi~-Gd~~~---~~~l~~~~i~~a~~vv~~t~~d   76 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVIN-GDCTK---IKTLEDAGIEDADMYIAVTGKE   76 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEEE-SCTTS---HHHHHHTTTTTCSEEEECCSCH
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhhhhhhcc-Ccccc---hhhhhhcChhhhhhhcccCCcH
Confidence            58999999999999999999998 89999999999888765 5654333 22222   2234444333789999998874

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.79  E-value=0.0019  Score=54.59  Aligned_cols=79  Identities=25%  Similarity=0.388  Sum_probs=54.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCc-ee----ecCCCCC--ccHHHHHHHHc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVT-DF----VNTSEHD--RPIQEVIAEMT  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~-~v----i~~~~~~--~~~~~~~~~~~  255 (373)
                      +++++||+|+ +++|.+.+..+.+.|+ +|+.+++++++.+.+    ++.+.. .+    .|..+.+  ..+.+.+.+..
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4789999987 8999999999999999 899999998886664    333321 22    2332221  11333344433


Q ss_pred             CCCccEEEEccCC
Q 017336          256 NGGVDRSVECTGN  268 (373)
Q Consensus       256 ~~~~d~vid~~g~  268 (373)
                       +++|+++++.|.
T Consensus        88 -g~iD~lVnnAg~   99 (257)
T d1xg5a_          88 -SGVDICINNAGL   99 (257)
T ss_dssp             -CCCSEEEECCCC
T ss_pred             -CCCCEEEecccc
Confidence             379999999875

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.79  E-value=0.00097  Score=54.21  Aligned_cols=97  Identities=18%  Similarity=0.172  Sum_probs=62.4

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .++|+|+|+ |.+|...+..+...|. +|.++.|+.++.......+++.+. -+-.+  . +.+.+... +.|+||.++|
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~-gD~~d--~-~~l~~al~-~~d~vi~~~g   76 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHVVV-GDVLQ--A-ADVDKTVA-GQDAVIVLLG   76 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSEEEE-SCTTS--H-HHHHHHHT-TCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhccccccccccccc-ccccc--h-hhHHHHhc-CCCEEEEEec
Confidence            478999998 9999999998888898 899999998886544444554332 22122  2 23444333 6899999987


Q ss_pred             ChH----------hHHHHHHHhhcC-CcEEEEEcC
Q 017336          268 NID----------NMISAFECVHDG-WGVAVLVGV  291 (373)
Q Consensus       268 ~~~----------~~~~~~~~l~~~-~g~~v~~g~  291 (373)
                      ...          .....++.++.. -.+++.++.
T Consensus        77 ~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss  111 (205)
T d1hdoa_          77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (205)
T ss_dssp             CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             cCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence            531          122344444442 147777764

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.78  E-value=0.0045  Score=52.07  Aligned_cols=78  Identities=21%  Similarity=0.283  Sum_probs=53.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCcee---ecCCCCC--ccHHHHHHHHcCCC
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHD--RPIQEVIAEMTNGG  258 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~v---i~~~~~~--~~~~~~~~~~~~~~  258 (373)
                      ||.+||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+    ++.|....   .|..+.+  ..+.+.+.+.. ++
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~-g~   79 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY-GP   79 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-CS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHh-CC
Confidence            577899987 8999999999999999 899999998776654    34555432   2332221  11333333333 37


Q ss_pred             ccEEEEccCC
Q 017336          259 VDRSVECTGN  268 (373)
Q Consensus       259 ~d~vid~~g~  268 (373)
                      +|+++++.|.
T Consensus        80 iDilVnnAG~   89 (257)
T d2rhca1          80 VDVLVNNAGR   89 (257)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEecccc
Confidence            9999999874

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.78  E-value=0.0023  Score=53.96  Aligned_cols=105  Identities=20%  Similarity=0.292  Sum_probs=71.7

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHh----c-C--CceeecCCCCCccHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----F-G--VTDFVNTSEHDRPIQEVI  251 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~----l-g--~~~vi~~~~~~~~~~~~~  251 (373)
                      +....+++||++||=.|+|. |.+++.+|+..|. .+|++++.+++..+.+++    + +  .+.+..... +  ..+  
T Consensus        88 Ii~~l~i~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~-d--~~~--  161 (264)
T d1i9ga_          88 IVHEGDIFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS-D--LAD--  161 (264)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS-C--GGG--
T ss_pred             HHHHhCCCCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEec-c--ccc--
Confidence            45678999999999998876 7788889988764 389999999998888765    2 1  122211111 1  100  


Q ss_pred             HHHcCCCccEEEEccCC-hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          252 AEMTNGGVDRSVECTGN-IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       252 ~~~~~~~~d~vid~~g~-~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..+..+.||.||--... .+.+..+.+.|+++ |+++.+-.
T Consensus       162 ~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpG-G~lv~~~P  201 (264)
T d1i9ga_         162 SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYVA  201 (264)
T ss_dssp             CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             ccccCCCcceEEEecCCHHHHHHHHHhccCCC-CEEEEEeC
Confidence            01112379976655554 36788999999997 99987743

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.76  E-value=0.00036  Score=57.77  Aligned_cols=98  Identities=14%  Similarity=0.221  Sum_probs=61.8

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHH---HHHHcCC---cEEEEEcCChhHHHHHHh---------cCCceeecCCCCCccHH
Q 017336          184 AKPERGSSVAVFGLGAVGLAAAE---GARIAGA---SRIIGVDRSSKRFEEAKK---------FGVTDFVNTSEHDRPIQ  248 (373)
Q Consensus       184 ~~~~~~~~vlI~G~g~~G~~ai~---la~~~g~---~~V~~~~~~~~~~~~~~~---------lg~~~vi~~~~~~~~~~  248 (373)
                      ..++++++||.+|+|. |..++.   ++...|.   .+|++++.+++-.+.+++         ++...+.....+.   .
T Consensus        76 ~~l~~g~~VLeIGtGs-GY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~---~  151 (223)
T d1r18a_          76 DHLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDG---R  151 (223)
T ss_dssp             TTCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCG---G
T ss_pred             hccCCCCeEEEecCCC-CHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccc---c
Confidence            3789999999998753 444444   4444443   279999998876666543         1222221111110   0


Q ss_pred             HHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEE
Q 017336          249 EVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVL  288 (373)
Q Consensus       249 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~  288 (373)
                      +.  ....+.||.|+-..+-+...+..++.|+++ |+++.
T Consensus       152 ~~--~~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~g-G~lV~  188 (223)
T d1r18a_         152 KG--YPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIV  188 (223)
T ss_dssp             GC--CGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEE
T ss_pred             cc--cccccceeeEEEEeechhchHHHHHhcCCC-cEEEE
Confidence            00  011237999998877766778889999997 99977

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.75  E-value=0.0049  Score=51.55  Aligned_cols=104  Identities=17%  Similarity=0.230  Sum_probs=66.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh--HHHHHHhcCCcee---ecCCCCC--ccHHHHHHHHcCCCc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTDF---VNTSEHD--RPIQEVIAEMTNGGV  259 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~--~~~~~~~lg~~~v---i~~~~~~--~~~~~~~~~~~~~~~  259 (373)
                      +++++||+|+ +++|.+.++.+...|+ +|+.++++++  ..+.++++|....   .|..+.+  ..+.+.+.+.. +++
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~-G~i   81 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF-GRC   81 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc-CCC
Confidence            4789999987 8999999999999999 8988887653  3345566776432   2332221  11222333333 379


Q ss_pred             cEEEEccCCh----------H---------------hHHHHHHHhhc-CCcEEEEEcCCC
Q 017336          260 DRSVECTGNI----------D---------------NMISAFECVHD-GWGVAVLVGVPS  293 (373)
Q Consensus       260 d~vid~~g~~----------~---------------~~~~~~~~l~~-~~g~~v~~g~~~  293 (373)
                      |+++++.|..          +               ....+++.|.. ++|+++.+++..
T Consensus        82 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~  141 (247)
T d2ew8a1          82 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTT  141 (247)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             CEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccch
Confidence            9999998852          1               22344555533 238999888653

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.74  E-value=0.0025  Score=53.80  Aligned_cols=78  Identities=23%  Similarity=0.250  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----c--CCcee---ecCCCCC--ccHHHHHHHHc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F--GVTDF---VNTSEHD--RPIQEVIAEMT  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----l--g~~~v---i~~~~~~--~~~~~~~~~~~  255 (373)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+.+    .  +....   .|..+.+  ..+.+.+.+..
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            4789999987 8999999999999999 89999999887665432    2  22221   2332221  11222333333


Q ss_pred             CCCccEEEEccC
Q 017336          256 NGGVDRSVECTG  267 (373)
Q Consensus       256 ~~~~d~vid~~g  267 (373)
                       |++|+++++.|
T Consensus        82 -G~iDiLVnnAG   92 (258)
T d1iy8a_          82 -GRIDGFFNNAG   92 (258)
T ss_dssp             -SCCSEEEECCC
T ss_pred             -CCCCEEEECCc
Confidence             37999999887

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.72  E-value=0.0032  Score=53.19  Aligned_cols=79  Identities=20%  Similarity=0.212  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh-HH----HHHHhcCCcee---ecCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RF----EEAKKFGVTDF---VNTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~-~~----~~~~~lg~~~v---i~~~~~~--~~~~~~~~~~~~  256 (373)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.++++.+ +.    +.+++.|.+..   .|..+.+  ..+.+.+.+.. 
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~-   83 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF-   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            5789999987 8999999999999999 8888888743 33    33455665432   2332221  11223333333 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|+++++.|.
T Consensus        84 G~iDiLVnnAG~   95 (261)
T d1geea_          84 GKLDVMINNAGL   95 (261)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEeecccee
Confidence            379999999875

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.0051  Score=47.49  Aligned_cols=99  Identities=24%  Similarity=0.236  Sum_probs=70.2

Q ss_pred             hhhhccC-CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCC
Q 017336          179 ATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG  257 (373)
Q Consensus       179 ~l~~~~~-~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~  257 (373)
                      ++.+..+ .-.|++++|+|-|-+|...++.++.+|+ +|++++.++-+.-.+.--|.. +..       +.    +.. .
T Consensus        13 ~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~-~V~v~e~dp~~al~A~~dG~~-v~~-------~~----~a~-~   78 (163)
T d1li4a1          13 GIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGA-RVIITEIDPINALQAAMEGYE-VTT-------MD----EAC-Q   78 (163)
T ss_dssp             HHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECC-------HH----HHT-T
T ss_pred             HHHHHhCceecCCEEEEeccccccHHHHHHHHhCCC-eeEeeecccchhHHhhcCceE-eee-------hh----hhh-h
Confidence            3444444 4589999999999999999999999999 999999988664444333443 221       21    221 2


Q ss_pred             CccEEEEccCChH-hHHHHHHHhhcCCcEEEEEcCC
Q 017336          258 GVDRSVECTGNID-NMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       258 ~~d~vid~~g~~~-~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ..|+++-++|... .-.+.++.|+++ ..+...|..
T Consensus        79 ~adivvtaTGn~~vI~~eh~~~MKdg-aIL~N~Ghf  113 (163)
T d1li4a1          79 EGNIFVTTTGCIDIILGRHFEQMKDD-AIVCNIGHF  113 (163)
T ss_dssp             TCSEEEECSSCSCSBCHHHHTTCCTT-EEEEECSSS
T ss_pred             hccEEEecCCCccchhHHHHHhccCC-eEEEEeccc
Confidence            5799999999854 455888999996 666665554

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.67  E-value=0.0045  Score=49.27  Aligned_cols=105  Identities=10%  Similarity=-0.018  Sum_probs=65.5

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC-Ccee---------ecCCCCC---ccH
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-VTDF---------VNTSEHD---RPI  247 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg-~~~v---------i~~~~~~---~~~  247 (373)
                      +....+.|+++||.+|+|. |..++.+|++ |+ .|++++.+++..+.+++.. ....         .......   .++
T Consensus        13 ~~~l~~~~~~rvLd~GCG~-G~~a~~la~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   89 (201)
T d1pjza_          13 WSSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   89 (201)
T ss_dssp             HHHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HHHcCCCCCCEEEEecCcC-CHHHHHHHHc-CC-ceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccc
Confidence            3445788999999999976 6778888864 98 8999999999999887631 1100         0000000   000


Q ss_pred             HHHHHHHcCCCccEEEEccCC--------hHhHHHHHHHhhcCCcEEEEEc
Q 017336          248 QEVIAEMTNGGVDRSVECTGN--------IDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       248 ~~~~~~~~~~~~d~vid~~g~--------~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      .+ +.......+|+|++...-        ...+..+.++|+++ |++++..
T Consensus        90 ~~-l~~~~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~Lkpg-G~l~l~~  138 (201)
T d1pjza_          90 FA-LTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLIT  138 (201)
T ss_dssp             SS-STHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEEE
T ss_pred             cc-cccccccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCC-cEEEEEE
Confidence            00 000111268999885431        24567888999997 9876543

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.65  E-value=0.0028  Score=53.34  Aligned_cols=104  Identities=17%  Similarity=0.211  Sum_probs=66.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c----CCcee----ecCCCCC--ccHHHHHHHHc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTDF----VNTSEHD--RPIQEVIAEMT  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-l----g~~~v----i~~~~~~--~~~~~~~~~~~  255 (373)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+.+ +    +...+    .|..+.+  .++.+.+.+..
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            5899999987 8999999999999999 89999999887665432 2    22121    2332221  11333333333


Q ss_pred             CCCccEEEEccCCh-----------------HhHHHHHHHhhcC----CcEEEEEcCCC
Q 017336          256 NGGVDRSVECTGNI-----------------DNMISAFECVHDG----WGVAVLVGVPS  293 (373)
Q Consensus       256 ~~~~d~vid~~g~~-----------------~~~~~~~~~l~~~----~g~~v~~g~~~  293 (373)
                       |++|+++++.|..                 .....+++.|...    .|+++.+++..
T Consensus        81 -G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~  138 (254)
T d2gdza1          81 -GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLA  138 (254)
T ss_dssp             -SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred             -CCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHh
Confidence             3799999998853                 1233445555431    27899888653

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.65  E-value=0.006  Score=52.50  Aligned_cols=80  Identities=16%  Similarity=0.224  Sum_probs=52.8

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hc--------CCcee---ecCCCCC--ccHHHHH
Q 017336          187 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF--------GVTDF---VNTSEHD--RPIQEVI  251 (373)
Q Consensus       187 ~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~l--------g~~~v---i~~~~~~--~~~~~~~  251 (373)
                      =+|+++||+|+ +++|.++++.+...|+ +|++++++.++.+.+. ++        +....   .|..+.+  ..+.+.+
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            36899999987 8999999999999999 8999999987765442 22        22221   2222211  1122233


Q ss_pred             HHHcCCCccEEEEccCC
Q 017336          252 AEMTNGGVDRSVECTGN  268 (373)
Q Consensus       252 ~~~~~~~~d~vid~~g~  268 (373)
                      .+.. ++.|+++++.|.
T Consensus        89 ~~~~-G~iDiLVnnAg~  104 (297)
T d1yxma1          89 LDTF-GKINFLVNNGGG  104 (297)
T ss_dssp             HHHH-SCCCEEEECCCC
T ss_pred             HHHh-CCeEEEEeeccc
Confidence            3333 379999998874

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.64  E-value=0.0037  Score=52.44  Aligned_cols=79  Identities=27%  Similarity=0.302  Sum_probs=54.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCC--ce-e--ecCCCCC--ccHHHHHHHHcCCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGV--TD-F--VNTSEHD--RPIQEVIAEMTNGG  258 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~--~~-v--i~~~~~~--~~~~~~~~~~~~~~  258 (373)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ ++.  .. .  .|..+.+  ..+.+.+.+.. |+
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~   82 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF-GP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH-SS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHh-CC
Confidence            5799999987 8999999999999999 89999999888776543 332  11 1  2222211  11333343333 37


Q ss_pred             ccEEEEccCC
Q 017336          259 VDRSVECTGN  268 (373)
Q Consensus       259 ~d~vid~~g~  268 (373)
                      +|+++++.|.
T Consensus        83 iDiLVnnAg~   92 (251)
T d1zk4a1          83 VSTLVNNAGI   92 (251)
T ss_dssp             CCEEEECCCC
T ss_pred             ceEEEecccc
Confidence            9999999875

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.64  E-value=0.00036  Score=58.32  Aligned_cols=98  Identities=23%  Similarity=0.255  Sum_probs=60.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCC----ccHHHHHHHHc-CCCccEE
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD----RPIQEVIAEMT-NGGVDRS  262 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~----~~~~~~~~~~~-~~~~d~v  262 (373)
                      +.+|||+|+ +++|.+.++.+...|+ +|+.+++++++..     .....+..+...    ....+.+.... .+++|++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhcc-----cccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence            457899988 8999999999999999 8999988765321     111111111111    01112222222 3479999


Q ss_pred             EEccCCh--------------------------HhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          263 VECTGNI--------------------------DNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       263 id~~g~~--------------------------~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +++.|..                          .....++..|+++ |+++.++...
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~Iv~isS~~  131 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGAAA  131 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCGG
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc-eEEEEeccHH
Confidence            9988741                          1233556667776 9999998643

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.63  E-value=0.01  Score=46.31  Aligned_cols=93  Identities=15%  Similarity=0.158  Sum_probs=64.5

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCc-EEEEEcCChhHHHHHHhcCCc-eeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~-~V~~~~~~~~~~~~~~~lg~~-~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      ++|+|+|.|.+|...+.-++..|.. +|++++++++.++.+++.+.. ........          ......|+|+-|+.
T Consensus         2 k~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~----------~~~~~~dlIila~p   71 (171)
T d2g5ca2           2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAK----------VEDFSPDFVMLSSP   71 (171)
T ss_dssp             CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGG----------GGGTCCSEEEECSC
T ss_pred             CEEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhh----------hhccccccccccCC
Confidence            4699999999999988888888853 799999999999999998863 33322111          11125789998887


Q ss_pred             ChH---hHHHHHHHhhcCCcEEEEEcCCC
Q 017336          268 NID---NMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       268 ~~~---~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      ...   .++...+.+.++ ..++.++...
T Consensus        72 ~~~~~~vl~~l~~~~~~~-~ii~d~~s~k   99 (171)
T d2g5ca2          72 VRTFREIAKKLSYILSED-ATVTDQGSVK   99 (171)
T ss_dssp             HHHHHHHHHHHHHHSCTT-CEEEECCSCC
T ss_pred             chhhhhhhhhhhcccccc-cccccccccc
Confidence            533   344455566665 6666665543

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.63  E-value=0.0031  Score=53.23  Aligned_cols=79  Identities=25%  Similarity=0.310  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-----HhcCCcee---ecCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-----KKFGVTDF---VNTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-----~~lg~~~v---i~~~~~~--~~~~~~~~~~~~  256 (373)
                      +|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+     ++.|....   .|..+.+  ..+.+.+.+.. 
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   85 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL-   85 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            4789999987 8999999999999999 899999887654332     34565432   2322221  11233333333 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|+++++.|.
T Consensus        86 g~iDilVnnAg~   97 (260)
T d1h5qa_          86 GPISGLIANAGV   97 (260)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCcEecccccc
Confidence            479999998874

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.63  E-value=0.0009  Score=56.51  Aligned_cols=104  Identities=9%  Similarity=0.054  Sum_probs=61.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCcee----ecCCCCCccH---HHHHHHHc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF----VNTSEHDRPI---QEVIAEMT  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~v----i~~~~~~~~~---~~~~~~~~  255 (373)
                      +|++|||+|+ +++|.+++..+...|+ +|+++.++.++.+.+.+    .+-..+    .|...+...+   .+.+.+..
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~-~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNL-KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCC-SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            4899999987 7999999999999999 66666555444433332    222221    2222111123   23333333


Q ss_pred             CCCccEEEEccCCh-----------------HhHHHHHHHhhc----CCcEEEEEcCCC
Q 017336          256 NGGVDRSVECTGNI-----------------DNMISAFECVHD----GWGVAVLVGVPS  293 (373)
Q Consensus       256 ~~~~d~vid~~g~~-----------------~~~~~~~~~l~~----~~g~~v~~g~~~  293 (373)
                       +++|+++++.|..                 .....+++.|..    ..|+++.++...
T Consensus        83 -g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~  140 (254)
T d1sbya1          83 -KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVT  140 (254)
T ss_dssp             -SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred             -CCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechh
Confidence             3799999998853                 123345555532    128888887654

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.62  E-value=0.0051  Score=51.57  Aligned_cols=79  Identities=20%  Similarity=0.240  Sum_probs=53.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCcee---ecCCCCC--ccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHD--RPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~v---i~~~~~~--~~~~~~~~~~~~~  257 (373)
                      .++.+||+|+ +++|.+++..+...|+ +|+.+++++++.+.+    ++.|....   .|..+.+  ..+.+.+.+.. +
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~-g   86 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH-K   86 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc-C
Confidence            4788999987 8999999998889999 899999998876654    34554332   2332211  11333333333 3


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|+++++.|.
T Consensus        87 ~iDilvnnag~   97 (251)
T d2c07a1          87 NVDILVNNAGI   97 (251)
T ss_dssp             CCCEEEECCCC
T ss_pred             Cceeeeecccc
Confidence            79999998875

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.61  E-value=0.0024  Score=54.45  Aligned_cols=79  Identities=29%  Similarity=0.367  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCc--ee----ecCCCCC--ccHHHHHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVT--DF----VNTSEHD--RPIQEVIAEM  254 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~--~v----i~~~~~~--~~~~~~~~~~  254 (373)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.    +.+..  .+    .|..+.+  ..+.+.+.+.
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            5899999987 8999999999999999 8999999988766543    34432  12    2322221  1122333333


Q ss_pred             cCCCccEEEEccCC
Q 017336          255 TNGGVDRSVECTGN  268 (373)
Q Consensus       255 ~~~~~d~vid~~g~  268 (373)
                      . |++|+++++.|.
T Consensus        82 ~-G~iDilVnnAG~   94 (274)
T d1xhla_          82 F-GKIDILVNNAGA   94 (274)
T ss_dssp             H-SCCCEEEECCCC
T ss_pred             c-CCceEEEeeccc
Confidence            3 379999998773

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.60  E-value=0.0022  Score=54.60  Aligned_cols=79  Identities=27%  Similarity=0.351  Sum_probs=53.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCc--ee----ecCCCCC--ccHHHHHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVT--DF----VNTSEHD--RPIQEVIAEM  254 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~--~v----i~~~~~~--~~~~~~~~~~  254 (373)
                      +|+++||+|+ +++|.+.+..+...|+ +|+.+++++++++.+.    +.+..  .+    .|..+.+  ..+.+.+.+.
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4789999987 8999999999999999 8999999988776553    33321  12    2332221  1123333333


Q ss_pred             cCCCccEEEEccCC
Q 017336          255 TNGGVDRSVECTGN  268 (373)
Q Consensus       255 ~~~~~d~vid~~g~  268 (373)
                      . +++|+++++.|.
T Consensus        83 ~-g~iDilvnnAG~   95 (272)
T d1xkqa_          83 F-GKIDVLVNNAGA   95 (272)
T ss_dssp             H-SCCCEEEECCCC
T ss_pred             h-CCceEEEeCCcc
Confidence            3 379999998774

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.59  E-value=0.0094  Score=45.61  Aligned_cols=82  Identities=24%  Similarity=0.278  Sum_probs=55.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      +|.++|+|.+|.+.++-+...|..+|++.++++++.+.+++ +|+...-+.+.-             ...|+||-|+- |
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~v-------------~~~Div~lavk-P   67 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPEL-------------HSDDVLILAVK-P   67 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCC-------------CTTSEEEECSC-H
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccccccccc-------------cccceEEEecC-H
Confidence            58899999999988774444453489999999998877755 676433222111             14799999886 4


Q ss_pred             HhHHHHHHHhhcCCcEEE
Q 017336          270 DNMISAFECVHDGWGVAV  287 (373)
Q Consensus       270 ~~~~~~~~~l~~~~g~~v  287 (373)
                      ..+....+-+.+. +.++
T Consensus        68 ~~~~~v~~~l~~~-~~~v   84 (152)
T d1yqga2          68 QDMEAACKNIRTN-GALV   84 (152)
T ss_dssp             HHHHHHHTTCCCT-TCEE
T ss_pred             HHHHHhHHHHhhc-ccEE
Confidence            6666667667664 5444

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.59  E-value=0.0049  Score=52.91  Aligned_cols=80  Identities=14%  Similarity=0.197  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-----HhcCCce-eecCCCCCcc-HHHHHHHH--cCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-----KKFGVTD-FVNTSEHDRP-IQEVIAEM--TNG  257 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-----~~lg~~~-vi~~~~~~~~-~~~~~~~~--~~~  257 (373)
                      +|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+     .+.|... .+..+-.+.+ ..+.+...  ..+
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            5799999987 8999999999999999 899999998765433     2334433 2222222211 22222221  123


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ++|+++++.|.
T Consensus       103 ~iDilvnnAg~  113 (294)
T d1w6ua_         103 HPNIVINNAAG  113 (294)
T ss_dssp             SCSEEEECCCC
T ss_pred             ccchhhhhhhh
Confidence            79999999874

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.56  E-value=0.005  Score=48.31  Aligned_cols=71  Identities=15%  Similarity=0.145  Sum_probs=49.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCC---ceeecCCCCCccHHHHHHHHcCCCccE
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGV---TDFVNTSEHDRPIQEVIAEMTNGGVDR  261 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~---~~vi~~~~~~~~~~~~~~~~~~~~~d~  261 (373)
                      ..++++|+|+|+|+++.+++..+...+. +|+++.|+.++.+.+.+ ++.   ...+..+.           .....+|+
T Consensus        15 ~~~~k~vlIlGaGGaarai~~aL~~~~~-~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~-----------~~~~~~di   82 (171)
T d1p77a1          15 LRPNQHVLILGAGGATKGVLLPLLQAQQ-NIVLANRTFSKTKELAERFQPYGNIQAVSMDS-----------IPLQTYDL   82 (171)
T ss_dssp             CCTTCEEEEECCSHHHHTTHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG-----------CCCSCCSE
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHcccCc-eeeeccchHHHHHHHHHHHhhccccchhhhcc-----------ccccccce
Confidence            4578999999999999999888877554 89999999888776643 332   11121111           11136899


Q ss_pred             EEEccCC
Q 017336          262 SVECTGN  268 (373)
Q Consensus       262 vid~~g~  268 (373)
                      +|+|++.
T Consensus        83 iIN~tp~   89 (171)
T d1p77a1          83 VINATSA   89 (171)
T ss_dssp             EEECCCC
T ss_pred             eeecccc
Confidence            9999875

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=96.55  E-value=0.009  Score=50.09  Aligned_cols=83  Identities=18%  Similarity=0.266  Sum_probs=52.7

Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh-------HHHHHHhcCCcee-e--cCCCCCccHHHHHHH
Q 017336          185 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-------RFEEAKKFGVTDF-V--NTSEHDRPIQEVIAE  253 (373)
Q Consensus       185 ~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~-------~~~~~~~lg~~~v-i--~~~~~~~~~~~~~~~  253 (373)
                      ..+|+.++||+|+ |++|++.+..+...|++.|+.+.++..       ..+.+++.|.... +  |..+.+ .+.+.+..
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~-~~~~~~~~   83 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRE-SVRELLGG   83 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHH-HHHHHHHT
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHH-HHHHhhcc
Confidence            4689999999987 899999999888889866777776532       1233445666432 2  322211 12222322


Q ss_pred             HcCC-CccEEEEccCC
Q 017336          254 MTNG-GVDRSVECTGN  268 (373)
Q Consensus       254 ~~~~-~~d~vid~~g~  268 (373)
                      .... ..|.++++.|.
T Consensus        84 i~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          84 IGDDVPLSAVFHAAAT   99 (259)
T ss_dssp             SCTTSCEEEEEECCCC
T ss_pred             cccccccccccccccc
Confidence            2222 68999998874

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.55  E-value=0.002  Score=45.16  Aligned_cols=35  Identities=26%  Similarity=0.376  Sum_probs=31.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      ++++|+|+|.|..|+.+++++...|+ +|++.+...
T Consensus         4 ~~K~v~ViGlG~sG~s~a~~L~~~g~-~v~~~D~~~   38 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVDFFLARGV-TPRVMDTRM   38 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHHTTC-CCEEEESSS
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEeeCCc
Confidence            47899999999999999999999999 899998754

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.54  E-value=0.0026  Score=53.90  Aligned_cols=79  Identities=22%  Similarity=0.279  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCc--ee----ecCCCCC--ccHHHHHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVT--DF----VNTSEHD--RPIQEVIAEM  254 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~--~v----i~~~~~~--~~~~~~~~~~  254 (373)
                      +++.+||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.    +.+..  .+    .|..+.+  ..+.+.+.+.
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            5789999987 8999999999999999 8999999988766543    33321  12    2332221  1122223232


Q ss_pred             cCCCccEEEEccCC
Q 017336          255 TNGGVDRSVECTGN  268 (373)
Q Consensus       255 ~~~~~d~vid~~g~  268 (373)
                      . +++|+++++.|.
T Consensus        83 ~-g~iDilvnnAG~   95 (264)
T d1spxa_          83 F-GKLDILVNNAGA   95 (264)
T ss_dssp             H-SCCCEEEECCC-
T ss_pred             h-CCCCEeeccccc
Confidence            2 379999999873

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=96.49  E-value=0.0067  Score=51.06  Aligned_cols=104  Identities=20%  Similarity=0.312  Sum_probs=65.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh-hHHHHH-----HhcCCcee---ecCCCCC--ccHHHHHHHHc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFEEA-----KKFGVTDF---VNTSEHD--RPIQEVIAEMT  255 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~-~~~~~~-----~~lg~~~v---i~~~~~~--~~~~~~~~~~~  255 (373)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++ ++.+.+     .+.|....   .|..+.+  ..+.+.+.+..
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            5789999987 8999999999999999 899998864 444333     23454432   2222211  11333333333


Q ss_pred             CCCccEEEEccCCh-------------------------HhHHHHHHHhhc-CCcEEEEEcCCC
Q 017336          256 NGGVDRSVECTGNI-------------------------DNMISAFECVHD-GWGVAVLVGVPS  293 (373)
Q Consensus       256 ~~~~d~vid~~g~~-------------------------~~~~~~~~~l~~-~~g~~v~~g~~~  293 (373)
                       |++|+++++.|..                         .....+++.|.. ++|+++.+++..
T Consensus        82 -G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~  144 (260)
T d1x1ta1          82 -GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAH  144 (260)
T ss_dssp             -SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             -CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeeccccc
Confidence             3799999998842                         123345555543 238999988754

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.48  E-value=0.0039  Score=51.55  Aligned_cols=100  Identities=19%  Similarity=0.193  Sum_probs=67.9

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCcee--ecCCCCCccHHHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHDRPIQEVIAE  253 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~v--i~~~~~~~~~~~~~~~  253 (373)
                      +.+.+.+++|++||=+|+|. |..+..+++. +. +|++++.++...+.+++    .+.+.+  +.-+..+  +     .
T Consensus         8 l~~~~~~~~~~rILDiGcGt-G~~~~~la~~-~~-~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~--~-----~   77 (234)
T d1xxla_           8 MIKTAECRAEHRVLDIGAGA-GHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAES--L-----P   77 (234)
T ss_dssp             HHHHHTCCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTB--C-----C
T ss_pred             HHHHhCCCCCCEEEEeCCcC-cHHHHHHHHh-CC-eEEEEeCChhhhhhhhhhhccccccccccccccccc--c-----c
Confidence            56778999999999999875 6777777765 55 89999999887776644    343321  1111111  0     1


Q ss_pred             HcCCCccEEEEccCC------hHhHHHHHHHhhcCCcEEEEEc
Q 017336          254 MTNGGVDRSVECTGN------IDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       254 ~~~~~~d~vid~~g~------~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      +..+.||+|+.+-.-      ...+..+.+.|+|+ |++++..
T Consensus        78 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~~~~~~  119 (234)
T d1xxla_          78 FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQD-GRFLLVD  119 (234)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccccceeeeeceeecccCHHHHHHHHHHeeCCC-cEEEEEE
Confidence            123479999975332      25688999999997 9888753

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.48  E-value=0.0048  Score=51.06  Aligned_cols=93  Identities=18%  Similarity=0.223  Sum_probs=67.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      +.++.+||=+|+| .|..+..+++ .|+ +|++++.+++..+.+++-+...++..+..+  +     .+..+.+|+|+..
T Consensus        40 ~~~~~~vLDiGcG-~G~~~~~l~~-~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~~~~--l-----~~~~~~fD~ii~~  109 (246)
T d2avna1          40 LKNPCRVLDLGGG-TGKWSLFLQE-RGF-EVVLVDPSKEMLEVAREKGVKNVVEAKAED--L-----PFPSGAFEAVLAL  109 (246)
T ss_dssp             CCSCCEEEEETCT-TCHHHHHHHT-TTC-EEEEEESCHHHHHHHHHHTCSCEEECCTTS--C-----CSCTTCEEEEEEC
T ss_pred             cCCCCEEEEECCC-Cchhcccccc-cce-EEEEeecccccccccccccccccccccccc--c-----ccccccccceeee
Confidence            5577889888998 4888888876 588 899999999999999997766555433322  1     1223479999865


Q ss_pred             cC------C-hHhHHHHHHHhhcCCcEEEEE
Q 017336          266 TG------N-IDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       266 ~g------~-~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      ..      . ..++....+.|+++ |.++..
T Consensus       110 ~~~~~~~~d~~~~l~~i~r~Lk~g-G~~ii~  139 (246)
T d2avna1         110 GDVLSYVENKDKAFSEIRRVLVPD-GLLIAT  139 (246)
T ss_dssp             SSHHHHCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cchhhhhhhHHHHHHHHHhhcCcC-cEEEEE
Confidence            33      2 14567888999997 988754

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.47  E-value=0.0098  Score=49.84  Aligned_cols=77  Identities=22%  Similarity=0.200  Sum_probs=51.3

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCcee---ecCCCCC--ccHHHHHHHHcCCCc
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHD--RPIQEVIAEMTNGGV  259 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~v---i~~~~~~--~~~~~~~~~~~~~~~  259 (373)
                      +.+||+|+ +++|++.+..+...|+ +|+.+++++++.+.+    ++.|.+..   .|..+.+  ..+.+.+.+.. |++
T Consensus         2 KValITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   79 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL-GGF   79 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT-TCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-CCc
Confidence            45688987 8999999988888999 899999998876654    34555432   2332221  11333333333 379


Q ss_pred             cEEEEccCC
Q 017336          260 DRSVECTGN  268 (373)
Q Consensus       260 d~vid~~g~  268 (373)
                      |+++++.|.
T Consensus        80 DilVnnAG~   88 (255)
T d1gega_          80 DVIVNNAGV   88 (255)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEecccc
Confidence            999998874

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.00065  Score=56.44  Aligned_cols=99  Identities=16%  Similarity=0.181  Sum_probs=64.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce--eecCCCCCccHHHHHHHHcCCCccEEE
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSV  263 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~--vi~~~~~~~~~~~~~~~~~~~~~d~vi  263 (373)
                      ..+|++||-+|+|. |..+..+++..+. +|++++.+++..+.+++.....  .+.....+  +......+..+.||.++
T Consensus        51 ~~~g~~VLdIGcG~-G~~a~~~a~~~~~-~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~fD~i~  126 (229)
T d1zx0a1          51 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGL--WEDVAPTLPDGHFDGIL  126 (229)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESC--HHHHGGGSCTTCEEEEE
T ss_pred             ccCCCeEEEeeccc-hHHHHHHHHcCCC-eEEEeCCCHHHHHHHHHHhhhccccccccccc--cccccccccccccccee
Confidence            35788999999875 6677788876665 8999999999998887643211  11111111  33333334445788874


Q ss_pred             -EccCCh----------HhHHHHHHHhhcCCcEEEEE
Q 017336          264 -ECTGNI----------DNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       264 -d~~g~~----------~~~~~~~~~l~~~~g~~v~~  289 (373)
                       |.+...          .++..+.+.|+|+ |+++.+
T Consensus       127 fD~~~~~~~~~~~~~~~~~~~~~~r~LkpG-G~~~~~  162 (229)
T d1zx0a1         127 YDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYC  162 (229)
T ss_dssp             ECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEEC
T ss_pred             ecccccccccccccCHHHHHHHHHHHcCCC-cEEEEE
Confidence             544321          2566788999997 998764

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.45  E-value=0.013  Score=45.26  Aligned_cols=89  Identities=17%  Similarity=0.231  Sum_probs=64.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  270 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  270 (373)
                      +|-|+|.|.+|...+.-+...|+ .|++.++++++.+.+++.++... .  .    ..+.++     ..|+||-|+..++
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~~-~--~----~~e~~~-----~~d~ii~~v~~~~   68 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAETA-S--T----AKAIAE-----QCDVIITMLPNSP   68 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-S--S----HHHHHH-----HCSEEEECCSSHH
T ss_pred             EEEEEehhHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHhhhhhc-c--c----HHHHHh-----CCCeEEEEcCCHH
Confidence            47899999999998888888899 89999999999999998887432 1  1    222222     4799999998766


Q ss_pred             hHHHH-------HHHhhcCCcEEEEEcCCC
Q 017336          271 NMISA-------FECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       271 ~~~~~-------~~~l~~~~g~~v~~g~~~  293 (373)
                      .....       ...+.++ ..++.++...
T Consensus        69 ~v~~v~~~~~~~~~~~~~g-~iiid~sT~~   97 (161)
T d1vpda2          69 HVKEVALGENGIIEGAKPG-TVLIDMSSIA   97 (161)
T ss_dssp             HHHHHHHSTTCHHHHCCTT-CEEEECSCCC
T ss_pred             HHHHHHhCCcchhhccCCC-CEEEECCCCC
Confidence            55543       3445564 5666665543

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.42  E-value=0.006  Score=51.32  Aligned_cols=102  Identities=22%  Similarity=0.239  Sum_probs=65.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE-cCChhHHHH----HHhcCCcee-e--cCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEE----AKKFGVTDF-V--NTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~-~~~~~~~~~----~~~lg~~~v-i--~~~~~~--~~~~~~~~~~~~  256 (373)
                      .||++||+|+ +++|.+.++.+...|+ +|+.+ .++++..+.    +++.|.+.. +  |..+.+  ..+.+.+.+.. 
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~-   82 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF-   82 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc-
Confidence            5899999987 8999999999999999 66664 555554443    445666542 2  222211  11333333333 


Q ss_pred             CCccEEEEccCCh-------------------------HhHHHHHHHhhcCCcEEEEEcCC
Q 017336          257 GGVDRSVECTGNI-------------------------DNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       257 ~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ++.|+++++.|..                         .....++..|+.+ |.++.+...
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~~iii~s~  142 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSI  142 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred             CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC-Ccccccccc
Confidence            3799999998852                         1345667777776 777777653

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.41  E-value=0.0032  Score=51.84  Aligned_cols=100  Identities=17%  Similarity=0.222  Sum_probs=68.4

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce--eecCCCCCccHHHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD--FVNTSEHDRPIQEVIAE  253 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~--vi~~~~~~~~~~~~~~~  253 (373)
                      +.+.++++++++||=+|+| .|..+..+++. |+ +|++++.+++..+.+++    .+.+.  ++..+..+  +     .
T Consensus         7 ll~~~~l~~~~rVLDiGcG-~G~~~~~l~~~-~~-~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~--l-----~   76 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVATG-GGHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQ--M-----P   76 (231)
T ss_dssp             HHHHHTCCSCCEEEEETCT-TCHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-C--C-----C
T ss_pred             HHHhcCCCCcCEEEEeccc-CcHHHHHHHHh-CC-EEEEEECCHHHHhhhhhccccccccccccccccccc--c-----c
Confidence            5677899999999999987 46667777654 66 89999999987776643    44433  22211111  0     1


Q ss_pred             HcCCCccEEEEccC-----Ch-HhHHHHHHHhhcCCcEEEEEc
Q 017336          254 MTNGGVDRSVECTG-----NI-DNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       254 ~~~~~~d~vid~~g-----~~-~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      +..+.||+|+..-.     .+ ..+..+.++|+|+ |++++..
T Consensus        77 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~i~~  118 (231)
T d1vl5a_          77 FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVD  118 (231)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccccccccccccccccCCHHHHHHHHHHhcCCC-cEEEEEe
Confidence            12347999987533     22 5688999999997 9998764

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.40  E-value=0.0073  Score=50.65  Aligned_cols=79  Identities=23%  Similarity=0.296  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCc----cHHHHHHHHcC
Q 017336          188 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDR----PIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g--~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~----~~~~~~~~~~~  256 (373)
                      +|+++||+|+ |  ++|.+.++.+...|+ +|+.++++++..+.+++    .+....+..+-.+.    .+.+.+.+.. 
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   84 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF-   84 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc-
Confidence            5899999997 5  799999999999999 78888888765544432    33333332222221    1333333333 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      ++.|+++++.|.
T Consensus        85 g~iDilVnnag~   96 (256)
T d1ulua_          85 GGLDYLVHAIAF   96 (256)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCceEEEecccc
Confidence            379999998764

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.0013  Score=57.34  Aligned_cols=105  Identities=17%  Similarity=0.209  Sum_probs=68.7

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCc-EEEEEcCChhHHHHHHh----cC-----------Ccee--ecCC
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKK----FG-----------VTDF--VNTS  241 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~-~V~~~~~~~~~~~~~~~----lg-----------~~~v--i~~~  241 (373)
                      +....+++||++||=.|+|. |.+++.+|+..|.+ +|++++.+++..+.+++    ++           .+.+  +..+
T Consensus        90 Il~~l~i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~d  168 (324)
T d2b25a1          90 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  168 (324)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHHhCCCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecc
Confidence            45668999999999999876 88888999988643 89999999998887754    11           1111  1111


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCCh-HhHHHHHHHhhcCCcEEEEEcC
Q 017336          242 EHDRPIQEVIAEMTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      -.+  +   ......+.||.||--...+ ..+..+.+.|+|+ |+++.+-.
T Consensus       169 i~~--~---~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpG-G~lv~~~P  213 (324)
T d2b25a1         169 ISG--A---TEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYVV  213 (324)
T ss_dssp             TTC--C---C-------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEES
T ss_pred             hhh--c---ccccCCCCcceEeecCcCHHHHHHHHHHhccCC-CEEEEEeC
Confidence            001  1   1111223688877433433 5789999999997 99998753

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.39  E-value=0.011  Score=45.46  Aligned_cols=93  Identities=24%  Similarity=0.289  Sum_probs=68.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      +=.|++++|.|=|-+|.-.++-++.+|+ +|++++.++-+.=.+.--|. .|..           +.+.. ...|+++-+
T Consensus        20 ~laGk~vvV~GYG~vGrG~A~~~rg~Ga-~V~V~E~DPi~alqA~mdGf-~v~~-----------~~~a~-~~aDi~vTa   85 (163)
T d1v8ba1          20 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGF-NVVT-----------LDEIV-DKGDFFITC   85 (163)
T ss_dssp             CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTC-EECC-----------HHHHT-TTCSEEEEC
T ss_pred             eecCCEEEEecccccchhHHHHHHhCCC-EEEEEecCchhhHHHHhcCC-ccCc-----------hhHcc-ccCcEEEEc
Confidence            4589999999999999999999999999 99999998865333322233 2321           22222 257999999


Q ss_pred             cCChHh-HHHHHHHhhcCCcEEEEEcCCC
Q 017336          266 TGNIDN-MISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       266 ~g~~~~-~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +|..+. -...++.|+++ ..+...|-..
T Consensus        86 TGn~~vI~~~h~~~MKdg-aIl~N~GHfd  113 (163)
T d1v8ba1          86 TGNVDVIKLEHLLKMKNN-AVVGNIGHFD  113 (163)
T ss_dssp             CSSSSSBCHHHHTTCCTT-CEEEECSSTT
T ss_pred             CCCCccccHHHHHHhhCC-eEEEeccccc
Confidence            998764 55788999996 7777766543

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.34  E-value=0.0084  Score=51.66  Aligned_cols=103  Identities=19%  Similarity=0.274  Sum_probs=65.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCC---------hhHHHH----HHhcCCceeecCCCCC--ccHHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS---------SKRFEE----AKKFGVTDFVNTSEHD--RPIQEVI  251 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~---------~~~~~~----~~~lg~~~vi~~~~~~--~~~~~~~  251 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|++.+++         ++..+.    +...+.....+..+.+  ..+.+.+
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~   84 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA   84 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHH
Confidence            4789999998 7999999999999999 78887553         222222    2233444444444322  1233333


Q ss_pred             HHHcCCCccEEEEccCCh-------------------------HhHHHHHHHhhc-CCcEEEEEcCC
Q 017336          252 AEMTNGGVDRSVECTGNI-------------------------DNMISAFECVHD-GWGVAVLVGVP  292 (373)
Q Consensus       252 ~~~~~~~~d~vid~~g~~-------------------------~~~~~~~~~l~~-~~g~~v~~g~~  292 (373)
                      .+.. |++|+++++.|..                         .....++..|.. ++|+||.+++.
T Consensus        85 ~~~~-G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~  150 (302)
T d1gz6a_          85 LDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASA  150 (302)
T ss_dssp             HHHT-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             HHHc-CCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCCh
Confidence            3333 3799999998842                         133455666643 34899999864

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.33  E-value=0.0086  Score=50.13  Aligned_cols=95  Identities=24%  Similarity=0.277  Sum_probs=63.2

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcCCCccE
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDR  261 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~  261 (373)
                      .+++++||=+|+|. |.+++.++ ++|+ +|++++.+++..+.+++    .|....+.  ..+  +.+   ....+.||+
T Consensus       118 ~~~g~~VLDiGcGs-G~l~i~aa-~~g~-~V~gvDis~~av~~A~~na~~n~~~~~~~--~~d--~~~---~~~~~~fD~  187 (254)
T d2nxca1         118 LRPGDKVLDLGTGS-GVLAIAAE-KLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFL--EGS--LEA---ALPFGPFDL  187 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHH-HTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEE--ESC--HHH---HGGGCCEEE
T ss_pred             cCccCEEEEcccch-hHHHHHHH-hcCC-EEEEEECChHHHHHHHHHHHHcCCceeEE--ecc--ccc---cccccccch
Confidence            57899999999874 66666555 4687 89999999988877764    34432111  111  221   222348999


Q ss_pred             EEEccCCh---HhHHHHHHHhhcCCcEEEEEcC
Q 017336          262 SVECTGNI---DNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       262 vid~~g~~---~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      |+......   ..+....+.|+|+ |++++.|.
T Consensus       188 V~ani~~~~l~~l~~~~~~~LkpG-G~lilSgi  219 (254)
T d2nxca1         188 LVANLYAELHAALAPRYREALVPG-GRALLTGI  219 (254)
T ss_dssp             EEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             hhhccccccHHHHHHHHHHhcCCC-cEEEEEec
Confidence            98754332   3456788999997 99987543

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.32  E-value=0.0044  Score=49.35  Aligned_cols=101  Identities=18%  Similarity=0.245  Sum_probs=65.5

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc-eeecCCCCCccHHHHHHHHc
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~-~vi~~~~~~~~~~~~~~~~~  255 (373)
                      ....+++++++||=+|+|. |..++.+|+. +. +|++++.+++..+.+++    +|.. .+-.. ..+  ..+..  ..
T Consensus        26 l~~l~~~~g~~VLDiGcGs-G~~s~~lA~~-~~-~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~-~gd--a~~~~--~~   97 (186)
T d1l3ia_          26 MCLAEPGKNDVAVDVGCGT-GGVTLELAGR-VR-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLM-EGD--APEAL--CK   97 (186)
T ss_dssp             HHHHCCCTTCEEEEESCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEE-ESC--HHHHH--TT
T ss_pred             HHhcCCCCCCEEEEEECCe-Eccccccccc-ce-EEEEecCCHHHHHHHHHHHHHcCCCcceEEE-ECc--hhhcc--cc
Confidence            3457889999999998754 4445566664 44 89999999988777754    5652 22111 111  22222  11


Q ss_pred             CCCccEEEEccCC---hHhHHHHHHHhhcCCcEEEEEc
Q 017336          256 NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       256 ~~~~d~vid~~g~---~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      ...+|+|+...+.   .+.++.+.+.|+++ |+++...
T Consensus        98 ~~~~D~v~~~~~~~~~~~~~~~~~~~Lkpg-G~lvi~~  134 (186)
T d1l3ia_          98 IPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTA  134 (186)
T ss_dssp             SCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             cCCcCEEEEeCccccchHHHHHHHHHhCcC-CEEEEEe
Confidence            2379998876443   25677888999997 9887653

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.31  E-value=0.011  Score=47.44  Aligned_cols=82  Identities=26%  Similarity=0.244  Sum_probs=61.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      -.|++|+|.|.|.+|..+++++...|+ +|++++.+.++.+....+|.+.+ ..+           +......|+++=|.
T Consensus        25 L~gk~v~IqG~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~g~~~~-~~~-----------~~~~~~~DI~iPcA   91 (201)
T d1c1da1          25 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAV-ALE-----------DVLSTPCDVFAPCA   91 (201)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-CGG-----------GGGGCCCSEEEECS
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhhccccc-Ccc-----------ccccccceeeeccc
Confidence            378999999999999999999999999 89999999999999888887643 111           12223688888776


Q ss_pred             CChHhHHHHHHHhhc
Q 017336          267 GNIDNMISAFECVHD  281 (373)
Q Consensus       267 g~~~~~~~~~~~l~~  281 (373)
                      .+...-....+.++-
T Consensus        92 ~~~~I~~~~a~~i~a  106 (201)
T d1c1da1          92 MGGVITTEVARTLDC  106 (201)
T ss_dssp             CSCCBCHHHHHHCCC
T ss_pred             ccccccHHHHhhhhh
Confidence            553444455555544

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.25  E-value=0.0041  Score=53.07  Aligned_cols=102  Identities=16%  Similarity=0.096  Sum_probs=69.9

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce---eecCCCCCccHHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD---FVNTSEHDRPIQEVIA  252 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~---vi~~~~~~~~~~~~~~  252 (373)
                      +...+.++++.+||=+|+|. |..+..+++..|+ +|++++.++...+.+++    .|...   ++..+..+      + 
T Consensus        59 l~~~~~l~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~------l-  129 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGAGY-GGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLE------I-  129 (282)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTS------C-
T ss_pred             HHHhcCCCCCCEEEEeCCCC-cHHHhhhhccCCc-EEEEEeccchhhhhhhccccccccccccccccccccc------c-
Confidence            34557899999999999874 6677788888898 89999999988777654    34421   22211111      0 


Q ss_pred             HHcCCCccEEEEccC-----C-hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          253 EMTNGGVDRSVECTG-----N-IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       253 ~~~~~~~d~vid~~g-----~-~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      .+..+.||+|+..-.     . ..++..+.+.|+|+ |++++...
T Consensus       130 ~~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~Lkpg-G~l~~~~~  173 (282)
T d2o57a1         130 PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  173 (282)
T ss_dssp             SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cccccccchhhccchhhhccCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            112237999986422     1 24678999999997 99887654

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.24  E-value=0.00088  Score=55.95  Aligned_cols=75  Identities=24%  Similarity=0.210  Sum_probs=50.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCC--ccHHHHHHHHcCCCccEEEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD--RPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~--~~~~~~~~~~~~~~~d~vid  264 (373)
                      .++++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+..    ...|..+.+  ..+.+.+.+.. +++|++++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~----~~~Dv~~~~~v~~~~~~~~~~~-g~iDiLVn   79 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLFG----VEVDVTDSDAVDRAFTAVEEHQ-GPVEVLVS   79 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSEE----EECCTTCHHHHHHHHHHHHHHH-SSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhcCceE----EEEecCCHHHHHHHHHHHHHhc-CCceEEEe
Confidence            5799999987 7999999999999999 89999988765432211    122332221  11333333333 37999999


Q ss_pred             ccCC
Q 017336          265 CTGN  268 (373)
Q Consensus       265 ~~g~  268 (373)
                      ++|.
T Consensus        80 nAG~   83 (237)
T d1uzma1          80 NAGL   83 (237)
T ss_dssp             ECSC
T ss_pred             eecc
Confidence            8874

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=96.23  E-value=0.035  Score=42.56  Aligned_cols=95  Identities=17%  Similarity=0.230  Sum_probs=58.0

Q ss_pred             CEEEEECCCHHHH-HHHHHHHHcCCcEEEEE-cCCh--hHHHHHHhcCCceeecCCCCCccHHHHHHHHcC-CCccEEEE
Q 017336          190 SSVAVFGLGAVGL-AAAEGARIAGASRIIGV-DRSS--KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN-GGVDRSVE  264 (373)
Q Consensus       190 ~~vlI~G~g~~G~-~ai~la~~~g~~~V~~~-~~~~--~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~-~~~d~vid  264 (373)
                      =+|.|+|+|.+|. ..+++++....-.++++ +++.  ....+++++|......       ..+.+.+... .++|+||+
T Consensus         5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~-------~~d~l~~~~~~~~iDiVf~   77 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYA-------GVEGLIKLPEFADIDFVFD   77 (157)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESS-------HHHHHHHSGGGGGEEEEEE
T ss_pred             cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCccccc-------ceeeeeecccccccCEEEE
Confidence            3789999999987 56778776644355555 4444  3456778888764321       3334433322 27999999


Q ss_pred             ccCChHhHHHH--HHHhhcCCcEEEEEcCCC
Q 017336          265 CTGNIDNMISA--FECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       265 ~~g~~~~~~~~--~~~l~~~~g~~v~~g~~~  293 (373)
                      ++....+.+..  .+.++.  |.++.-....
T Consensus        78 ATpag~h~~~~~~~~aa~~--G~~VID~s~a  106 (157)
T d1nvmb1          78 ATSASAHVQNEALLRQAKP--GIRLIDLTPA  106 (157)
T ss_dssp             CSCHHHHHHHHHHHHHHCT--TCEEEECSTT
T ss_pred             cCCchhHHHhHHHHHHHHc--CCEEEEcccc
Confidence            98765555544  334554  6655554443

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.13  E-value=0.034  Score=46.02  Aligned_cols=100  Identities=21%  Similarity=0.218  Sum_probs=61.7

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEE-cCChhHHHHH----HhcCCcee---ecCCCCC--ccHHHHHHHHcCCCc
Q 017336          191 SVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEA----KKFGVTDF---VNTSEHD--RPIQEVIAEMTNGGV  259 (373)
Q Consensus       191 ~vlI~G~-g~~G~~ai~la~~~g~~~V~~~-~~~~~~~~~~----~~lg~~~v---i~~~~~~--~~~~~~~~~~~~~~~  259 (373)
                      .+||+|+ +++|++.++.+...|+ +|+.. .+++++.+.+    ++.|....   .|..+.+  ..+.+.+.+.. +++
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   80 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GTI   80 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CCC
Confidence            5788887 8999999999999999 77665 5566555444    34555432   2322221  11333333333 479


Q ss_pred             cEEEEccCCh-------------------------HhHHHHHHHhhc-CCcEEEEEcCC
Q 017336          260 DRSVECTGNI-------------------------DNMISAFECVHD-GWGVAVLVGVP  292 (373)
Q Consensus       260 d~vid~~g~~-------------------------~~~~~~~~~l~~-~~g~~v~~g~~  292 (373)
                      |+++++.|..                         .....+++.|.. ++|+++.+++.
T Consensus        81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~  139 (244)
T d1edoa_          81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASV  139 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCT
T ss_pred             CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcCh
Confidence            9999988742                         133455565522 24999999874

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.12  E-value=0.0067  Score=48.27  Aligned_cols=40  Identities=25%  Similarity=0.297  Sum_probs=34.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  230 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~  230 (373)
                      ++|.|+|+|.+|...++++...|+ +|+..+.+++.++.+.
T Consensus         5 ~~vaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~~~   44 (186)
T d1wdka3           5 KQAAVLGAGIMGGGIAYQSASKGT-PILMKDINEHGIEQGL   44 (186)
T ss_dssp             SSEEEECCHHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHhhhh
Confidence            679999999999999888888999 8999999988766543

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=96.08  E-value=0.0076  Score=51.00  Aligned_cols=79  Identities=11%  Similarity=0.134  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH---hcCCc-eee--cCCCCC--ccHHHHHHHHcC
Q 017336          188 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAK---KFGVT-DFV--NTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~-g--~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~---~lg~~-~vi--~~~~~~--~~~~~~~~~~~~  256 (373)
                      +|+++||+|+ |  ++|.++++.+...|+ +|+.++++++..+.++   +.+.. .+.  +.....  ..+.+.+.+.. 
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-   81 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL-   81 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc-
Confidence            5899999986 5  799999999999999 8999988864333333   22222 222  222111  11223333333 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|+++.+.|.
T Consensus        82 g~id~lV~nag~   93 (274)
T d2pd4a1          82 GSLDFIVHSVAF   93 (274)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCCCeEEeeccc
Confidence            379999998874

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.05  E-value=0.023  Score=46.58  Aligned_cols=103  Identities=18%  Similarity=0.161  Sum_probs=68.4

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHhc----CCceeecCCCCCccHHHHHHHHc
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~l----g~~~vi~~~~~~~~~~~~~~~~~  255 (373)
                      .+...++||++||=+|+|. |..+..+++..|- .+|++++.+++..+.+++.    +....+..+.....   .. ...
T Consensus        66 l~~l~i~pG~~VLDlGaGs-G~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~---~~-~~~  140 (227)
T d1g8aa_          66 LKNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPE---EY-RAL  140 (227)
T ss_dssp             CCCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGG---GG-TTT
T ss_pred             ccccccCCCCEEEEeccCC-CHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcc---cc-ccc
Confidence            3557899999999999876 7788888988763 4899999999888877653    22222222221100   01 011


Q ss_pred             CCCccEEEEccCCh----HhHHHHHHHhhcCCcEEEEE
Q 017336          256 NGGVDRSVECTGNI----DNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       256 ~~~~d~vid~~g~~----~~~~~~~~~l~~~~g~~v~~  289 (373)
                      ...+|+++.-+..+    .++..+.+.|+++ |+++++
T Consensus       141 ~~~vD~i~~d~~~~~~~~~~l~~~~~~Lkpg-G~lvi~  177 (227)
T d1g8aa_         141 VPKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA  177 (227)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccceEEEEEEccccchHHHHHHHHHHhcccC-CeEEEE
Confidence            12688888765432    3577888999997 988764

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.98  E-value=0.0017  Score=54.66  Aligned_cols=74  Identities=23%  Similarity=0.180  Sum_probs=50.7

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce----eecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          191 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD----FVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       191 ~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~----vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      ++||+|+ +++|++++..+...|+ +|++++++.++.+.+++.+...    +.+.++ -..+.+.+.+.. |+.|+++++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~-~~~~~~~~~~~~-G~iDiLVnN   78 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPMSEQE-PAELIEAVTSAY-GQVDVLVSN   78 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEECCCCS-HHHHHHHHHHHH-SCCCEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhhhCcEEEeccCCHHH-HHHHHHHHHHHc-CCCCEEEEC
Confidence            6899998 7999999998999999 8999998888877776543221    222211 122344444443 379999987


Q ss_pred             cC
Q 017336          266 TG  267 (373)
Q Consensus       266 ~g  267 (373)
                      .|
T Consensus        79 Ag   80 (252)
T d1zmta1          79 DI   80 (252)
T ss_dssp             CC
T ss_pred             Cc
Confidence            65

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.96  E-value=0.0034  Score=52.56  Aligned_cols=78  Identities=14%  Similarity=0.214  Sum_probs=49.0

Q ss_pred             CEEEEECC-CHHHHHHHHHHH---HcCCcEEEEEcCChhHHHHHHhc---CCce-e--ecCCCCC--ccHHHHHHHHcC-
Q 017336          190 SSVAVFGL-GAVGLAAAEGAR---IAGASRIIGVDRSSKRFEEAKKF---GVTD-F--VNTSEHD--RPIQEVIAEMTN-  256 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~---~~g~~~V~~~~~~~~~~~~~~~l---g~~~-v--i~~~~~~--~~~~~~~~~~~~-  256 (373)
                      ++|||+|+ +++|+++++.+.   ..|+ +|+.+++++++.+.++++   +... +  .|..+.+  ..+.+.++.... 
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            68999998 899999876554   3577 899999998776655432   2221 2  2333322  113333333333 


Q ss_pred             CCccEEEEccCC
Q 017336          257 GGVDRSVECTGN  268 (373)
Q Consensus       257 ~~~d~vid~~g~  268 (373)
                      +++|+++++.|.
T Consensus        82 ~~iDiLvnNAg~   93 (248)
T d1snya_          82 QGLNVLFNNAGI   93 (248)
T ss_dssp             GCCSEEEECCCC
T ss_pred             CCcceEEeeccc
Confidence            379999998773

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.90  E-value=0.037  Score=44.59  Aligned_cols=102  Identities=17%  Similarity=0.032  Sum_probs=65.7

Q ss_pred             hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcCC
Q 017336          182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG  257 (373)
Q Consensus       182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~~  257 (373)
                      ....++||++||=+|+|. |..+..+++..+..+|++++.+++..+.+++    .+-...+..+..+...   . .....
T Consensus        50 ~~l~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~---~-~~~~~  124 (209)
T d1nt2a_          50 HRLKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWK---Y-SGIVE  124 (209)
T ss_dssp             CCCCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGG---T-TTTCC
T ss_pred             ccCCCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccc---c-ccccc
Confidence            346799999999999865 6677788887765599999999988776644    3322222222111000   0 01112


Q ss_pred             CccEEEEccCCh----HhHHHHHHHhhcCCcEEEEE
Q 017336          258 GVDRSVECTGNI----DNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       258 ~~d~vid~~g~~----~~~~~~~~~l~~~~g~~v~~  289 (373)
                      .+|+++.....+    .++..+.+.|+++ |++++.
T Consensus       125 ~vd~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  159 (209)
T d1nt2a_         125 KVDLIYQDIAQKNQIEILKANAEFFLKEK-GEVVIM  159 (209)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             eEEEEEecccChhhHHHHHHHHHHHhccC-CeEEEE
Confidence            578877654322    3577888999997 998765

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.90  E-value=0.0092  Score=50.57  Aligned_cols=101  Identities=23%  Similarity=0.319  Sum_probs=62.9

Q ss_pred             CCEE-EEECC-CHHHHHHHH-HHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCC--ccHHHHHHHHcC
Q 017336          189 GSSV-AVFGL-GAVGLAAAE-GARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       189 ~~~v-lI~G~-g~~G~~ai~-la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~--~~~~~~~~~~~~  256 (373)
                      |++| ||+|+ +++|+++++ |++..|+ +|+.+++++++.+.+    ++.+... +  .|..+.+  ..+.+.+.+.. 
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~-   79 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-   79 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc-
Confidence            6777 66787 899998775 5566688 899999998886654    3334332 2  2332221  11333444433 


Q ss_pred             CCccEEEEccCCh-------------------------HhHHHHHHHhhcCCcEEEEEcCC
Q 017336          257 GGVDRSVECTGNI-------------------------DNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       257 ~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      +++|++|+..|..                         .....++..|++. |+++.++..
T Consensus        80 g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-g~ivnisS~  139 (275)
T d1wmaa1          80 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ-GRVVNVSSI  139 (275)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECCH
T ss_pred             CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCccccccc
Confidence            3799999998841                         1233445556775 999888763

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.80  E-value=0.014  Score=45.13  Aligned_cols=90  Identities=14%  Similarity=0.186  Sum_probs=61.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      ++|.++|.|.+|...+.-+.+.|+ .|.+.+++.++.+.+.+.+....-+       ..+.+     ...|+++-|+...
T Consensus         2 ~kIg~IGlG~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~~-------~~e~~-----~~~diii~~v~~~   68 (162)
T d3cuma2           2 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGASAARS-------ARDAV-----QGADVVISMLPAS   68 (162)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEECSS-------HHHHH-----TSCSEEEECCSCH
T ss_pred             CEEEEEEEHHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhhccccch-------hhhhc-----cccCeeeecccch
Confidence            468899999999988887777898 8999999999999988887653211       21211     1468888888775


Q ss_pred             HhHHHH-------HHHhhcCCcEEEEEcCCC
Q 017336          270 DNMISA-------FECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       270 ~~~~~~-------~~~l~~~~g~~v~~g~~~  293 (373)
                      ......       ...+.++ ..++.++...
T Consensus        69 ~~~~~v~~~~~~~~~~l~~g-~iiid~st~~   98 (162)
T d3cuma2          69 QHVEGLYLDDDGLLAHIAPG-TLVLECSTIA   98 (162)
T ss_dssp             HHHHHHHHSTTCHHHHSCTT-CEEEECSCCC
T ss_pred             hhHHHHHhccccccccCCCC-CEEEECCCCC
Confidence            544433       3345554 5555554443

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.74  E-value=0.041  Score=45.10  Aligned_cols=103  Identities=17%  Similarity=0.142  Sum_probs=65.4

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC----ceeecCCCCCccHHHHHHHHcC
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV----TDFVNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~----~~vi~~~~~~~~~~~~~~~~~~  256 (373)
                      .+...++||++||=+|+|. |..+..+++.....+|++++.+++..+.+++.-.    ...+..+.....   ..... .
T Consensus        67 l~~l~ikpG~~VLDlGcGs-G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~---~~~~~-~  141 (230)
T d1g8sa_          67 LKVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQ---EYANI-V  141 (230)
T ss_dssp             CCCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGG---GGTTT-C
T ss_pred             HHhCCCCCCCEEEEeCEEc-CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCc---ccccc-c
Confidence            3557899999999999875 6777788876544589999999988887766421    112222221100   00011 1


Q ss_pred             CCccEEEEccCCh----HhHHHHHHHhhcCCcEEEEE
Q 017336          257 GGVDRSVECTGNI----DNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       257 ~~~d~vid~~g~~----~~~~~~~~~l~~~~g~~v~~  289 (373)
                      ..+|+++......    .++..+.+.|+++ |++++.
T Consensus       142 ~~v~~i~~~~~~~~~~~~~l~~~~r~LKpg-G~~~i~  177 (230)
T d1g8sa_         142 EKVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA  177 (230)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ceeEEeeccccchHHHHHHHHHHHHhcccC-ceEEEE
Confidence            1456666655432    3467888899997 988765

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.66  E-value=0.0042  Score=51.21  Aligned_cols=106  Identities=15%  Similarity=-0.002  Sum_probs=66.5

Q ss_pred             hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc-ee------------ecCCCCCcc-H
Q 017336          182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DF------------VNTSEHDRP-I  247 (373)
Q Consensus       182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~-~v------------i~~~~~~~~-~  247 (373)
                      ....+.++.+||..|+|. |..+..+|+ .|+ .|++++.+++..+.+++.... ..            ........+ .
T Consensus        39 ~~l~~~~~~rvLd~GCG~-G~~a~~LA~-~G~-~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  115 (229)
T d2bzga1          39 TFLKGKSGLRVFFPLCGK-AVEMKWFAD-RGH-SVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY  115 (229)
T ss_dssp             HHHTTCCSCEEEETTCTT-CTHHHHHHH-TTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred             HhcCCCCCCEEEEeCCCC-cHHHHHHHh-CCC-cEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence            445678899999999876 777777776 598 899999999988877653211 10            000000000 0


Q ss_pred             HHHHHHH---cCCCccEEEEccCC--------hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          248 QEVIAEM---TNGGVDRSVECTGN--------IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       248 ~~~~~~~---~~~~~d~vid~~g~--------~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ...+..+   ..+.+|+|+++..-        ...+....++|+|+ |++++...
T Consensus       116 ~~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~Lkpg-G~~~l~~~  169 (229)
T d2bzga1         116 CCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKK-FQYLLCVL  169 (229)
T ss_dssp             ESCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             EcchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCc-ceEEEEEc
Confidence            0001111   12368999986431        24567899999997 98776644

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=95.64  E-value=0.052  Score=41.10  Aligned_cols=96  Identities=14%  Similarity=0.183  Sum_probs=63.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCcEEEEEcCChh---HHHHHHhcCCceeecCCCCCcc---------------H
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIA--GASRIIGVDRSSK---RFEEAKKFGVTDFVNTSEHDRP---------------I  247 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~--g~~~V~~~~~~~~---~~~~~~~lg~~~vi~~~~~~~~---------------~  247 (373)
                      .++|.|+|+ |.+|..++.+.+..  .+ +|++++....   =.+.+++|.+..+...++....               -
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g   80 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAG   80 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEES
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccC
Confidence            478999998 99999999999876  46 7777765543   2344567888776544332100               1


Q ss_pred             HHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEE
Q 017336          248 QEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVA  286 (373)
Q Consensus       248 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~  286 (373)
                      .+.+.+.....+|+++.+..+...+.-.+.+++.+ -++
T Consensus        81 ~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~g-k~i  118 (150)
T d1r0ka2          81 ADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKG-KTV  118 (150)
T ss_dssp             HHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTT-SEE
T ss_pred             ccchheecccccceeeeecCchhHHHHHHHHHhcC-CEE
Confidence            11222233336899999877768888888888884 443

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=95.59  E-value=0.023  Score=47.39  Aligned_cols=80  Identities=18%  Similarity=0.243  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCC-ccHHHHHHHHcC--C
Q 017336          188 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHD-RPIQEVIAEMTN--G  257 (373)
Q Consensus       188 ~~~~vlI~G~-g--~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~-~~~~~~~~~~~~--~  257 (373)
                      .|+++||+|+ |  ++|.+++..+...|+ +|+.++++++..+.+++    .+....+..+..+ .+..+...+...  +
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            5899999987 5  688999999999999 78888888765555443    3333332222222 112222222222  2


Q ss_pred             CccEEEEccCC
Q 017336          258 GVDRSVECTGN  268 (373)
Q Consensus       258 ~~d~vid~~g~  268 (373)
                      ..|+.+++.+.
T Consensus        83 ~~d~~v~~a~~   93 (258)
T d1qsga_          83 KFDGFVHSIGF   93 (258)
T ss_dssp             SEEEEEECCCC
T ss_pred             ccceEEEeecc
Confidence            78999987653

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.52  E-value=0.028  Score=46.39  Aligned_cols=96  Identities=18%  Similarity=0.269  Sum_probs=65.3

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCce-eecCCCCCccHHHHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTD-FVNTSEHDRPIQEVIAEM  254 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l----g~~~-vi~~~~~~~~~~~~~~~~  254 (373)
                      ++......+.++||=+|+|. |..+..+++ .|+ .|++++.+++-.+.+++.    +... ++.-+         +.++
T Consensus        33 ~~~~~~~~~~~~iLDiGcGt-G~~~~~l~~-~~~-~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d---------~~~l  100 (251)
T d1wzna1          33 IFKEDAKREVRRVLDLACGT-GIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQGD---------VLEI  100 (251)
T ss_dssp             HHHHTCSSCCCEEEEETCTT-CHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEESC---------GGGC
T ss_pred             HHHHhcCCCCCEEEEeCCCC-Cccchhhcc-cce-EEEEEeeccccccccccccccccccchheehh---------hhhc
Confidence            34445677788999999986 777777776 578 899999999888877653    3221 22111         1112


Q ss_pred             c-CCCccEEEEccCCh---------HhHHHHHHHhhcCCcEEEE
Q 017336          255 T-NGGVDRSVECTGNI---------DNMISAFECVHDGWGVAVL  288 (373)
Q Consensus       255 ~-~~~~d~vid~~g~~---------~~~~~~~~~l~~~~g~~v~  288 (373)
                      . ++.||+|+...+.-         ..+..+.++|+|+ |++++
T Consensus       101 ~~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~Lkpg-G~lii  143 (251)
T d1wzna1         101 AFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPG-GVFIT  143 (251)
T ss_dssp             CCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred             ccccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCC-cEEEE
Confidence            2 23799998754321         3577899999997 98875

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.47  E-value=0.041  Score=44.40  Aligned_cols=93  Identities=13%  Similarity=0.151  Sum_probs=61.6

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-eecCCCCCccHHHHHHHHcCCCcc
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHDRPIQEVIAEMTNGGVD  260 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~-vi~~~~~~~~~~~~~~~~~~~~~d  260 (373)
                      ++++.+||=+|+|. |..+..+++ .|+ +|++++.+++..+.+++    .+... .+..+..+  +     ....+.+|
T Consensus        35 l~~~~~ILDiGcG~-G~~~~~la~-~~~-~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~--l-----~~~~~~fD  104 (226)
T d1ve3a1          35 MKKRGKVLDLACGV-GGFSFLLED-YGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK--L-----SFEDKTFD  104 (226)
T ss_dssp             CCSCCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS--C-----CSCTTCEE
T ss_pred             cCCCCEEEEECCCc-chhhhhHhh-hhc-ccccccccccchhhhhhhhcccccccccccccccc--c-----cccCcCce
Confidence            56888999999976 777778876 477 89999999988877764    33221 22111111  0     01123799


Q ss_pred             EEEEccCC-----h---HhHHHHHHHhhcCCcEEEEE
Q 017336          261 RSVECTGN-----I---DNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       261 ~vid~~g~-----~---~~~~~~~~~l~~~~g~~v~~  289 (373)
                      +|+....-     .   .++..+.+.|+|+ |++++.
T Consensus       105 ~I~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~lii~  140 (226)
T d1ve3a1         105 YVIFIDSIVHFEPLELNQVFKEVRRVLKPS-GKFIMY  140 (226)
T ss_dssp             EEEEESCGGGCCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EEEEecchhhCChhHHHHHHHHHHHHcCcC-cEEEEE
Confidence            98875331     1   3577899999997 998754

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.42  E-value=0.011  Score=49.19  Aligned_cols=47  Identities=30%  Similarity=0.326  Sum_probs=38.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCc
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVT  235 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~  235 (373)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCC
Confidence            6899999987 8999999999999999 899999887766544 456553

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.42  E-value=0.011  Score=51.16  Aligned_cols=98  Identities=18%  Similarity=0.273  Sum_probs=55.7

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHH---HHHhcCCce---eecCCCCCccHHHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE---EAKKFGVTD---FVNTSEHDRPIQEVIAE  253 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~---~~~~lg~~~---vi~~~~~~~~~~~~~~~  253 (373)
                      +.+.....++++||-+|+| .|.+++.+|+ .|+.+|++++.++.-..   ..++.+...   ++.-+..+  +     .
T Consensus        27 i~~~~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~--l-----~   97 (311)
T d2fyta1          27 IYQNPHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEE--V-----H   97 (311)
T ss_dssp             HHHCGGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTT--S-----C
T ss_pred             HHhccccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHH--h-----c
Confidence            3344456789999999987 4666666665 57779999998875432   223334321   22221111  0     0


Q ss_pred             HcCCCccEEEEc-cC----Ch----HhHHHHHHHhhcCCcEEE
Q 017336          254 MTNGGVDRSVEC-TG----NI----DNMISAFECVHDGWGVAV  287 (373)
Q Consensus       254 ~~~~~~d~vid~-~g----~~----~~~~~~~~~l~~~~g~~v  287 (373)
                      .....+|+|+.- .+    ..    ..+...-+.|+|+ |+++
T Consensus        98 ~~~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~-G~ii  139 (311)
T d2fyta1          98 LPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKG-GSVY  139 (311)
T ss_dssp             CSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEE-EEEE
T ss_pred             CccccceEEEEeeeeeecccccccHHHHHHHHhcCCCC-cEEe
Confidence            112379999862 11    11    2233344678997 8775

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.30  E-value=0.088  Score=45.51  Aligned_cols=104  Identities=15%  Similarity=0.163  Sum_probs=67.7

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-----------cCCc--e--eecCCCCC
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----------FGVT--D--FVNTSEHD  244 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-----------lg~~--~--vi~~~~~~  244 (373)
                      +.+..+++++++||=+|+|. |..++++|+..++.++++++.+++..+.+++           +|..  .  ++.-+-.+
T Consensus       143 ~~~~~~l~~~~~vlD~GcG~-G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~~  221 (328)
T d1nw3a_         143 MIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS  221 (328)
T ss_dssp             HHHHSCCCTTCEEEEETCTT-SHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTTS
T ss_pred             HHHHcCCCCCCEEEEcCCCC-CHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcccc
Confidence            56778899999999999876 7888899999998789999999987766643           2221  1  22222122


Q ss_pred             ccHHHHHHHHcCCCccEEEEccC--Ch---HhHHHHHHHhhcCCcEEEEEc
Q 017336          245 RPIQEVIAEMTNGGVDRSVECTG--NI---DNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       245 ~~~~~~~~~~~~~~~d~vid~~g--~~---~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      ..+.+.+.     .+|+|+-..-  .+   ..+....+.|++| |+++..-
T Consensus       222 ~~~~~~~~-----~advi~~~~~~f~~~~~~~l~e~~r~LKpG-g~iv~~~  266 (328)
T d1nw3a_         222 EEWRERIA-----NTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSK  266 (328)
T ss_dssp             HHHHHHHH-----HCSEEEECCTTTCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred             cccccccC-----cceEEEEcceecchHHHHHHHHHHHhCCCC-cEEEEec
Confidence            11222221     2578774211  22   3456778889997 9998754

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=95.27  E-value=0.03  Score=46.82  Aligned_cols=80  Identities=15%  Similarity=0.255  Sum_probs=52.0

Q ss_pred             CCCCEEEEECC-C--HHHHHHHHHHHHcCCcEEEEEcCChhHH-H-HHHhcCCcee---ecCCCCC--ccHHHHHHHHcC
Q 017336          187 ERGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRF-E-EAKKFGVTDF---VNTSEHD--RPIQEVIAEMTN  256 (373)
Q Consensus       187 ~~~~~vlI~G~-g--~~G~~ai~la~~~g~~~V~~~~~~~~~~-~-~~~~lg~~~v---i~~~~~~--~~~~~~~~~~~~  256 (373)
                      =.|+++||+|+ |  ++|.++++-+...|+ +|+.+.+++++. + ..++++....   .|..+.+  ....+.+.+...
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            36899999985 4  599999999999999 788888877664 3 3344554331   2222211  123344444433


Q ss_pred             C--CccEEEEccC
Q 017336          257 G--GVDRSVECTG  267 (373)
Q Consensus       257 ~--~~d~vid~~g  267 (373)
                      .  ..|+++++.|
T Consensus        83 ~~~~ld~~i~~ag   95 (268)
T d2h7ma1          83 AGNKLDGVVHSIG   95 (268)
T ss_dssp             TTCCEEEEEECCC
T ss_pred             cCCCcceeeeccc
Confidence            3  6899999887

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.24  E-value=0.054  Score=43.16  Aligned_cols=87  Identities=18%  Similarity=0.130  Sum_probs=58.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .|++|.|+|.|.+|...+++++.+|+ +|++.++........  .+..    .  .+  +.+.++     ..|+|+.++.
T Consensus        42 ~gk~vgIiG~G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~~--~~~~----~--~~--l~~~l~-----~sDii~~~~p  105 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPELEK--KGYY----V--DS--LDDLYK-----QADVISLHVP  105 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHH--TTCB----C--SC--HHHHHH-----HCSEEEECSC
T ss_pred             cCCeEEEecccccchhHHHhHhhhcc-cccccCccccccccc--ceee----e--cc--cccccc-----ccccccccCC
Confidence            47899999999999999999999999 899997654432221  1211    1  11  333332     3688888765


Q ss_pred             Ch----Hh-HHHHHHHhhcCCcEEEEEcC
Q 017336          268 NI----DN-MISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       268 ~~----~~-~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..    .. -...++.|+++ ..+|.++-
T Consensus       106 lt~~T~~li~~~~l~~mk~~-a~lIN~sR  133 (197)
T d1j4aa1         106 DVPANVHMINDESIAKMKQD-VVIVNVSR  133 (197)
T ss_dssp             CCGGGTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred             ccccccccccHHHHhhhCCc-cEEEecCc
Confidence            32    12 24678888886 77777654

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.21  E-value=0.025  Score=48.12  Aligned_cols=98  Identities=18%  Similarity=0.152  Sum_probs=66.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC--------cee-ecCCCCCccHHHHHHHHcCC
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--------TDF-VNTSEHDRPIQEVIAEMTNG  257 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~--------~~v-i~~~~~~~~~~~~~~~~~~~  257 (373)
                      ...++|||+|.|. |..+-.+++..+..+|.+++.+++=.+.++++-.        +++ +...    +..+.+++...+
T Consensus        79 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~----Da~~~l~~~~~~  153 (290)
T d1xj5a_          79 PNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIG----DGVAFLKNAAEG  153 (290)
T ss_dssp             SCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEES----CHHHHHHTSCTT
T ss_pred             CCCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEc----cHHHHHhhcccc
Confidence            4557999998755 4445577777776689999999998888877431        111 1111    144556555445


Q ss_pred             CccEEEE-ccC---------ChHhHHHHHHHhhcCCcEEEEEc
Q 017336          258 GVDRSVE-CTG---------NIDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       258 ~~d~vid-~~g---------~~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      .+|+||- +..         +.++++.+.++|+++ |.++.-.
T Consensus       154 ~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~  195 (290)
T d1xj5a_         154 SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQA  195 (290)
T ss_dssp             CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             CccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCC-cEEEEec
Confidence            8998764 332         236889999999997 9888754

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.19  E-value=0.047  Score=42.62  Aligned_cols=44  Identities=14%  Similarity=0.229  Sum_probs=38.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  234 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~  234 (373)
                      .+|-++|.|.+|...+.-+...|+ .|++.++++++.+.+.+.++
T Consensus         3 ~nIg~IGlG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~   46 (176)
T d2pgda2           3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEA   46 (176)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTT
T ss_pred             CcEEEEeEhHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhcc
Confidence            578999999999998888888899 89999999999988877554

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.15  E-value=0.013  Score=49.30  Aligned_cols=94  Identities=16%  Similarity=0.147  Sum_probs=60.9

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce---eecCCCCCccHHHHHHHHcCC
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD---FVNTSEHDRPIQEVIAEMTNG  257 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~---vi~~~~~~~~~~~~~~~~~~~  257 (373)
                      .+++|++||-.++|. |..++.+|+.-++ +|++++.+++..+.+++    .|.+.   ++.-+..         ++...
T Consensus       104 ~~~~g~~VlD~~aG~-G~~~l~~a~~~~~-~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~---------~~~~~  172 (260)
T d2frna1         104 VAKPDELVVDMFAGI-GHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNR---------DFPGE  172 (260)
T ss_dssp             HCCTTCEEEETTCTT-TTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTT---------TCCCC
T ss_pred             hcCCccEEEECcceE-cHHHHHHHHhCCc-EEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchH---------HhccC
Confidence            367899999987643 4455566765444 89999999998888764    34432   2222111         12222


Q ss_pred             -CccEEEEc--cCChHhHHHHHHHhhcCCcEEEEEc
Q 017336          258 -GVDRSVEC--TGNIDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       258 -~~d~vid~--~g~~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                       .+|.|+-.  ..+.+++..+++.++++ |.+....
T Consensus       173 ~~~D~Ii~~~p~~~~~~l~~a~~~l~~g-G~lh~~~  207 (260)
T d2frna1         173 NIADRILMGYVVRTHEFIPKALSIAKDG-AIIHYHN  207 (260)
T ss_dssp             SCEEEEEECCCSSGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCCEEEECCCCchHHHHHHHHhhcCCC-CEEEEEe
Confidence             68866542  33457888999999996 8776543

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.15  E-value=0.027  Score=42.89  Aligned_cols=86  Identities=15%  Similarity=0.190  Sum_probs=61.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      +|.++|+|.+|.+.+.-+...|. ++++.+++.++.+.+ +++|....-     +  ..+.+.     ..|+||-|+- |
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~g~~~~~-----~--~~~~~~-----~~dvIilavk-p   67 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPYAM-----S--HQDLID-----QVDLVILGIK-P   67 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCBCS-----S--HHHHHH-----TCSEEEECSC-G
T ss_pred             EEEEEeccHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhccccceeeec-----h--hhhhhh-----ccceeeeecc-h
Confidence            47889999999988776666677 899999998877665 567765321     1  222221     5799999985 4


Q ss_pred             HhHHHHHHHhhcCCcEEEEEcC
Q 017336          270 DNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       270 ~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..+...++.+.++ ..++.+..
T Consensus        68 ~~~~~vl~~l~~~-~~iis~~a   88 (152)
T d2ahra2          68 QLFETVLKPLHFK-QPIISMAA   88 (152)
T ss_dssp             GGHHHHHTTSCCC-SCEEECCT
T ss_pred             HhHHHHhhhcccc-eeEecccc
Confidence            7777888888875 66665543

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.13  E-value=0.028  Score=48.74  Aligned_cols=103  Identities=25%  Similarity=0.262  Sum_probs=63.3

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHc--CCC
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT--NGG  258 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~--~~~  258 (373)
                      .++++++||=+++|. |..++.+|+ .|+..|++++.+++..+.+++    .|...-+.....+  ..+.+....  ++.
T Consensus       142 ~~~~g~~VLDl~~g~-G~~si~~a~-~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d--~~~~~~~~~~~~~~  217 (324)
T d2as0a2         142 WVQPGDRVLDVFTYT-GGFAIHAAI-AGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGS--AFEEMEKLQKKGEK  217 (324)
T ss_dssp             GCCTTCEEEETTCTT-THHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHTTCC
T ss_pred             hcCCCCeeecccCcc-cchhhhhhh-cCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeech--hhhhhHHHHhccCC
Confidence            357899998876532 333334444 477799999999998888765    4543211111222  434443332  238


Q ss_pred             ccEEEEccCC---------------hHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          259 VDRSVECTGN---------------IDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       259 ~d~vid~~g~---------------~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ||+|+--...               ..++..+.++|+++ |.++.+...
T Consensus       218 fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pG-G~lv~~s~s  265 (324)
T d2as0a2         218 FDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDG-GILVTCSCS  265 (324)
T ss_dssp             EEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEE-EEEEEEECC
T ss_pred             CCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCC-cEEEEEeCC
Confidence            9998852221               13567788899997 999887654

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.11  E-value=0.084  Score=40.96  Aligned_cols=100  Identities=19%  Similarity=0.218  Sum_probs=63.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCcEEEEEc-C-ChhHHHHHHhcCCceeecCCCCCccHHH-------HHHHHcCCCcc
Q 017336          191 SVAVFGLGAVGLAAAEGARIA-GASRIIGVD-R-SSKRFEEAKKFGVTDFVNTSEHDRPIQE-------VIAEMTNGGVD  260 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~-g~~~V~~~~-~-~~~~~~~~~~lg~~~vi~~~~~~~~~~~-------~~~~~~~~~~d  260 (373)
                      +|.|.|.|-+|...+..+... .. .++++. . ++.....+.+++.+......+....+.+       .+.+.. .++|
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~di-eiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vD   81 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDM-ELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLL-EKVD   81 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHH-TTCS
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCc-eEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhh-ccCC
Confidence            689999999999888877654 34 555553 2 3345556666665543321111000000       011111 2699


Q ss_pred             EEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          261 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       261 ~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +|+||+|.....+.+...+..+ -+.|+.+...
T Consensus        82 vViEcTG~f~~~~~~~~hl~~G-~k~Vi~s~~~  113 (172)
T d2czca2          82 IIVDATPGGIGAKNKPLYEKAG-VKAIFQGGEK  113 (172)
T ss_dssp             EEEECCSTTHHHHHHHHHHHHT-CEEEECTTSC
T ss_pred             EEEECCCCCCCHHHHHHHHHcC-CCEEEECCCC
Confidence            9999999877778888999997 8888887754

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=95.05  E-value=0.049  Score=44.87  Aligned_cols=102  Identities=18%  Similarity=0.137  Sum_probs=63.8

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCc------EEEEEcCChhHHHHHH----hcCCcee---ecCCCCC--ccHHHHHHHH
Q 017336          191 SVAVFGL-GAVGLAAAEGARIAGAS------RIIGVDRSSKRFEEAK----KFGVTDF---VNTSEHD--RPIQEVIAEM  254 (373)
Q Consensus       191 ~vlI~G~-g~~G~~ai~la~~~g~~------~V~~~~~~~~~~~~~~----~lg~~~v---i~~~~~~--~~~~~~~~~~  254 (373)
                      .|||+|+ +++|.+.+..+...|++      .|+.+++++++++.+.    +.|....   .|..+.+  ..+.+.+.+.
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4688887 79999999888888884      3888889888766553    3454321   2332221  1133333333


Q ss_pred             cCCCccEEEEccCCh-------------------------HhHHHHHHHhhc-CCcEEEEEcCCC
Q 017336          255 TNGGVDRSVECTGNI-------------------------DNMISAFECVHD-GWGVAVLVGVPS  293 (373)
Q Consensus       255 ~~~~~d~vid~~g~~-------------------------~~~~~~~~~l~~-~~g~~v~~g~~~  293 (373)
                      . |++|+++++.|..                         .....+++.|.. ++|+++.+++..
T Consensus        83 ~-g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~  146 (240)
T d2bd0a1          83 Y-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVA  146 (240)
T ss_dssp             T-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             c-CCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechh
Confidence            3 3799999998842                         133445556643 238999987654

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.03  E-value=0.065  Score=47.68  Aligned_cols=105  Identities=14%  Similarity=0.170  Sum_probs=68.4

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc-----------CC----cee-ecCCCC
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-----------GV----TDF-VNTSEH  243 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l-----------g~----~~v-i~~~~~  243 (373)
                      +.+..++++++++|=+|+|. |..++++|+..|+.+|++++.++...+.+++.           +.    ... +.-...
T Consensus       208 Il~~l~Lkpgd~fLDLGCG~-G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f~  286 (406)
T d1u2za_         208 VYQQCQLKKGDTFMDLGSGV-GNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV  286 (406)
T ss_dssp             HHHHTTCCTTCEEEEESCTT-SHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred             HHHHhCCCCCCEEEeCCCCC-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeechh
Confidence            45778899999988889876 88999999999977899999999877766532           11    111 111111


Q ss_pred             CccHHHHHHHHcCCCccEEEEcc--CCh---HhHHHHHHHhhcCCcEEEEEc
Q 017336          244 DRPIQEVIAEMTNGGVDRSVECT--GNI---DNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       244 ~~~~~~~~~~~~~~~~d~vid~~--g~~---~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      ....   ..... ..+|+++-..  -.+   ..+....+.|++| |+++..-
T Consensus       287 ~~~~---~d~~~-~~adVV~inn~~f~~~l~~~L~ei~r~LKPG-GrIVs~~  333 (406)
T d1u2za_         287 DNNR---VAELI-PQCDVILVNNFLFDEDLNKKVEKILQTAKVG-CKIISLK  333 (406)
T ss_dssp             TCHH---HHHHG-GGCSEEEECCTTCCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred             hccc---ccccc-ccceEEEEecccCchHHHHHHHHHHHhcCCC-cEEEEec
Confidence            1111   11111 1477877531  122   3567888899997 9998754

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.99  E-value=0.037  Score=44.87  Aligned_cols=73  Identities=22%  Similarity=0.226  Sum_probs=47.2

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCc-EEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~-~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .+|||+|+ |.+|...+..+...|.. .|+.+.+++++.+.+.. +...+. -+-.+  . +.+.+... ++|+|+++.+
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~~~~-~d~~~--~-~~~~~~~~-~~d~vi~~a~   77 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EADVFI-GDITD--A-DSINPAFQ-GIDALVILTS   77 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTTEEE-CCTTS--H-HHHHHHHT-TCSEEEECCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcEEEE-eeecc--c-cccccccc-cceeeEEEEe
Confidence            68999997 99999999999888853 57777788776654432 333221 11111  1 22333333 6899999875


Q ss_pred             C
Q 017336          268 N  268 (373)
Q Consensus       268 ~  268 (373)
                      .
T Consensus        78 ~   78 (252)
T d2q46a1          78 A   78 (252)
T ss_dssp             C
T ss_pred             e
Confidence            3

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.98  E-value=0.0043  Score=48.17  Aligned_cols=89  Identities=13%  Similarity=0.149  Sum_probs=54.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce--ee-cCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FV-NTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~--vi-~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      +|+|+|+|.+|.+....+...|. .|..+++++++.+.....+.+.  .. .....   ..+.+     +.+|++|-++-
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~D~iii~vk   72 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESLTAN---DPDFL-----ATSDLLLVTLK   72 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEEEES---CHHHH-----HTCSEEEECSC
T ss_pred             EEEEECcCHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCccccccccccc---hhhhh-----cccceEEEeec
Confidence            68999999999998888888998 8999988876544333333211  00 00001   11111     26899999998


Q ss_pred             ChHhHHHHHHHh----hcCCcEEEEEc
Q 017336          268 NIDNMISAFECV----HDGWGVAVLVG  290 (373)
Q Consensus       268 ~~~~~~~~~~~l----~~~~g~~v~~g  290 (373)
                      .. ..+.+.+.+    .++ ..++.+.
T Consensus        73 a~-~~~~~~~~l~~~~~~~-~~Iv~~q   97 (167)
T d1ks9a2          73 AW-QVSDAVKSLASTLPVT-TPILLIH   97 (167)
T ss_dssp             GG-GHHHHHHHHHTTSCTT-SCEEEEC
T ss_pred             cc-chHHHHHhhccccCcc-cEEeecc
Confidence            74 344444444    343 5555553

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.93  E-value=0.011  Score=46.96  Aligned_cols=35  Identities=20%  Similarity=0.299  Sum_probs=31.0

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      +++|+|+|+|..|+.++..+++.|+..|+++++++
T Consensus         4 ~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGAGPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            68899999999999999999999985588887765

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.91  E-value=0.005  Score=52.82  Aligned_cols=99  Identities=17%  Similarity=0.129  Sum_probs=62.3

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCcee---ecCCCCCccHHHHHHHHcC
Q 017336          184 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDF---VNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       184 ~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l----g~~~v---i~~~~~~~~~~~~~~~~~~  256 (373)
                      .+.+++++||=+|+|. |..++.+++. |+ .|++++.+++.++.+++.    +....   .+....+  +...-.....
T Consensus        52 l~~~~~~~vLD~GcG~-G~~~~~la~~-g~-~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  126 (292)
T d1xvaa_          52 LRQHGCHRVLDVACGT-GVDSIMLVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEAN--WLTLDKDVPA  126 (292)
T ss_dssp             HHHTTCCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECC--GGGHHHHSCC
T ss_pred             hhhcCCCEEEEecCCC-cHHHHHHHHc-CC-eeeeccCchHHHHHHHHHHHhcccccccceeeeeecc--ccccccccCC
Confidence            3445678999888875 7777788775 88 899999999988777542    22110   0001111  2211122222


Q ss_pred             -CCccEEEEccCC--------------hHhHHHHHHHhhcCCcEEEE
Q 017336          257 -GGVDRSVECTGN--------------IDNMISAFECVHDGWGVAVL  288 (373)
Q Consensus       257 -~~~d~vid~~g~--------------~~~~~~~~~~l~~~~g~~v~  288 (373)
                       +.+|.|+.....              ...+..+.+.|+|+ |.+++
T Consensus       127 ~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~  172 (292)
T d1xvaa_         127 GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPG-GLLVI  172 (292)
T ss_dssp             TTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEE-EEEEE
T ss_pred             CCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcC-cEEEE
Confidence             379999864321              12688999999997 98876

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.75  E-value=0.049  Score=46.64  Aligned_cols=102  Identities=13%  Similarity=0.057  Sum_probs=64.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc--eeecCCCC---CccHHHHHHHHcCCCccE
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--DFVNTSEH---DRPIQEVIAEMTNGGVDR  261 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~--~vi~~~~~---~~~~~~~~~~~~~~~~d~  261 (373)
                      ...++|||+|+|. |..+-.+++.....+|.+++.+++=.+.++++-..  ...+....   -.+..+.+++ +...+|+
T Consensus       105 ~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~-~~~~yDv  182 (312)
T d2b2ca1         105 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN-HKNEFDV  182 (312)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH-CTTCEEE
T ss_pred             CCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHh-CCCCCCE
Confidence            3457999998765 44455667777766999999999998988875321  01110000   0124555654 4458999


Q ss_pred             EEEccC----------ChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          262 SVECTG----------NIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       262 vid~~g----------~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ||-=..          +.++++.+.++|+++ |.++.-+.
T Consensus       183 II~D~~dp~~~~~~L~t~eFy~~~~~~L~~~-Gi~v~q~~  221 (312)
T d2b2ca1         183 IITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQGE  221 (312)
T ss_dssp             EEECCC-------------HHHHHHHHEEEE-EEEEEECC
T ss_pred             EEEcCCCCCCcchhhhhHHHHHHHHhhcCCC-cEEEEecC
Confidence            884221          226788899999997 99887653

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.74  E-value=0.032  Score=44.38  Aligned_cols=40  Identities=28%  Similarity=0.412  Sum_probs=35.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  230 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~  230 (373)
                      ++|.|+|+|.+|...++++...|+ .|+..+.+++.++.++
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~a~   44 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKSK   44 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCC-cEEEEECChHHHHHHH
Confidence            689999999999999999999999 8999999988766553

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=94.63  E-value=0.043  Score=44.58  Aligned_cols=96  Identities=22%  Similarity=0.236  Sum_probs=61.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHH---cCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcCCC
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARI---AGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGG  258 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~---~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~~~  258 (373)
                      ++++.+||=+|+|. |..+..+++.   .++ +|++++.+++-++.+++    .+....+.....+      ........
T Consensus        37 ~~~~~~vLDlGCGt-G~~~~~l~~~~~~~~~-~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d------~~~~~~~~  108 (225)
T d1im8a_          37 VTADSNVYDLGCSR-GAATLSARRNINQPNV-KIIGIDNSQPMVERCRQHIAAYHSEIPVEILCND------IRHVEIKN  108 (225)
T ss_dssp             CCTTCEEEEESCTT-CHHHHHHHHTCCCSSC-EEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSC------TTTCCCCS
T ss_pred             cCCCCEEEEeccch-hhHHHHHHHhhcCCCC-ceEEeCCCHHHHHHHHHHhHhhcccchhhhccch------hhcccccc
Confidence            67889999999865 6666667764   466 89999999998888865    2322111111111      11112235


Q ss_pred             ccEEEEccCC--------hHhHHHHHHHhhcCCcEEEEEc
Q 017336          259 VDRSVECTGN--------IDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       259 ~d~vid~~g~--------~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      +|+++-+..-        ...+..+.+.|+|+ |.+++..
T Consensus       109 ~d~i~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~li~~~  147 (225)
T d1im8a_         109 ASMVILNFTLQFLPPEDRIALLTKIYEGLNPN-GVLVLSE  147 (225)
T ss_dssp             EEEEEEESCGGGSCGGGHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ceeeEEeeeccccChhhHHHHHHHHHHhCCCC-ceeeccc
Confidence            7776664321        14688999999997 9998764

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=94.63  E-value=0.032  Score=48.55  Aligned_cols=48  Identities=29%  Similarity=0.308  Sum_probs=39.5

Q ss_pred             ccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh
Q 017336          183 VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  231 (373)
Q Consensus       183 ~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~  231 (373)
                      ..-+++|++|||+|+ |-+|...+..+...|+ .|+++.++.++.+.++.
T Consensus         5 ~~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~~   53 (342)
T d1y1pa1           5 NAVLPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQK   53 (342)
T ss_dssp             TCSSCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred             CCCCCCcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHHH
Confidence            345678999999987 8999999988888898 89998888877666543

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.60  E-value=0.042  Score=43.70  Aligned_cols=90  Identities=16%  Similarity=0.231  Sum_probs=60.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCcee----ecCCCCCccHHHHHHHHcCCCc
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF----VNTSEHDRPIQEVIAEMTNGGV  259 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~v----i~~~~~~~~~~~~~~~~~~~~~  259 (373)
                      ++.+||=+|+| .|..+..+++ .|+ +|++++.+++.++.+++    .+.+.+    .+.....          ..+.|
T Consensus        30 ~~grvLDiGcG-~G~~~~~la~-~g~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~----------~~~~f   96 (198)
T d2i6ga1          30 APGRTLDLGCG-NGRNSLYLAA-NGY-DVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT----------FDGEY   96 (198)
T ss_dssp             CSCEEEEETCT-TSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC----------CCCCE
T ss_pred             CCCcEEEECCC-CCHHHHHHHH-Hhh-hhccccCcHHHHHHHHHHhhhccccchhhhheeccccc----------ccccc
Confidence            44589999997 5777777776 488 89999999988876653    454432    1111111          12379


Q ss_pred             cEEEEccC-----C---hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          260 DRSVECTG-----N---IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       260 d~vid~~g-----~---~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      |+|+...-     .   ..+++.+.++|+++ |++++...
T Consensus        97 D~I~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~  135 (198)
T d2i6ga1          97 DFILSTVVMMFLEAQTIPGLIANMQRCTKPG-GYNLIVAA  135 (198)
T ss_dssp             EEEEEESCGGGSCTTHHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             cEEEEeeeeecCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            99987331     1   13677888899997 98887644

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=94.57  E-value=0.066  Score=43.64  Aligned_cols=105  Identities=18%  Similarity=0.185  Sum_probs=69.2

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHH----
Q 017336          184 AKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM----  254 (373)
Q Consensus       184 ~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~----  254 (373)
                      .+....++||-+|.+. |..++.+|+.+.- .+|+.++.+++..+.+++    .|...-+.....+  ..+.+.++    
T Consensus        55 ~~~~~~k~iLEiGT~~-GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~--a~~~L~~l~~~~  131 (227)
T d1susa1          55 LKLINAKNTMEIGVYT-GYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGP--ALPVLDEMIKDE  131 (227)
T ss_dssp             HHHHTCCEEEEECCGG-GHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHCG
T ss_pred             HHhcCCCcEEEecchh-hhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehH--HHHHHHHHHhcc
Confidence            4445678999998743 7777777776632 289999999988777765    5664322222222  44445444    


Q ss_pred             -cCCCccEEEEccCC---hHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          255 -TNGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       255 -~~~~~d~vid~~g~---~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                       ..+.||.||-=...   ...++.+++.|+++ |.++.-+..
T Consensus       132 ~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~g-Giii~DNvl  172 (227)
T d1susa1         132 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDNTL  172 (227)
T ss_dssp             GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEETTT
T ss_pred             ccCCceeEEEeccchhhhHHHHHHHHhhcCCC-cEEEEccCC
Confidence             23479998754332   25688999999997 888876543

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.45  E-value=0.016  Score=50.21  Aligned_cols=94  Identities=19%  Similarity=0.229  Sum_probs=54.5

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHH---HHHHhcCCce---eecCCCCCccHHHHHHHHcCC
Q 017336          184 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF---EEAKKFGVTD---FVNTSEHDRPIQEVIAEMTNG  257 (373)
Q Consensus       184 ~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~---~~~~~lg~~~---vi~~~~~~~~~~~~~~~~~~~  257 (373)
                      ..+.++++||-+|+|. |.+++.+|+ .|+.+|++++.++.-.   +.+++-+...   ++.-+..+  +     ....+
T Consensus        29 ~~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~--~-----~~~~~   99 (316)
T d1oria_          29 RHLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEE--V-----ELPVE   99 (316)
T ss_dssp             HHHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTT--C-----CCSSS
T ss_pred             cccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHH--c-----ccccc
Confidence            3456889999999875 666665555 6877899999876422   2223334322   22222111  0     01123


Q ss_pred             CccEEEEc-cCC--------hHhHHHHHHHhhcCCcEEE
Q 017336          258 GVDRSVEC-TGN--------IDNMISAFECVHDGWGVAV  287 (373)
Q Consensus       258 ~~d~vid~-~g~--------~~~~~~~~~~l~~~~g~~v  287 (373)
                      .+|+|+.- .+.        +..+....++|+|+ |+++
T Consensus       100 ~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~-G~ii  137 (316)
T d1oria_         100 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPD-GLIF  137 (316)
T ss_dssp             CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             eeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCC-eEEE
Confidence            79998763 221        13455667899997 8775

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.42  E-value=0.018  Score=48.67  Aligned_cols=34  Identities=35%  Similarity=0.473  Sum_probs=30.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      +|+|+|+|+|..|+.++..+++.|. +|++++.++
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~-~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSC-EEEEECSSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            5889999999999999999999999 899997643

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.38  E-value=0.026  Score=44.33  Aligned_cols=38  Identities=32%  Similarity=0.371  Sum_probs=33.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      ....+++|+|+|+|+.|+.|+..+.+.|. +|+..+..+
T Consensus        39 ~~~~~k~V~IIGaGPAGL~AA~~la~~G~-~Vtl~E~~~   76 (179)
T d1ps9a3          39 PAVQKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHS   76 (179)
T ss_dssp             SCSSCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCCCCcEEEEECccHHHHHHHHHHHhhcc-ceEEEeccC
Confidence            34557899999999999999999999999 899998764

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.37  E-value=0.16  Score=35.11  Aligned_cols=73  Identities=19%  Similarity=0.261  Sum_probs=51.1

Q ss_pred             CCCCCCEEEEECCCHHHHHH-HHHHHHcCCcEEEEEcCC-hhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEE
Q 017336          185 KPERGSSVAVFGLGAVGLAA-AEGARIAGASRIIGVDRS-SKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  262 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~a-i~la~~~g~~~V~~~~~~-~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~v  262 (373)
                      ..+..++|.++|-|++|..+ +++++..|+ .|.+.+.. ....+.+++.|+.....+....          . .++|+|
T Consensus         4 ~~~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~~----------i-~~~d~v   71 (96)
T d1p3da1           4 EMRRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQAGAKIYIGHAEEH----------I-EGASVV   71 (96)
T ss_dssp             CCTTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHTTCEEEESCCGGG----------G-TTCSEE
T ss_pred             cchhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHCCCeEEECCcccc----------C-CCCCEE
Confidence            35567899999987778665 789999999 89999875 3455667778886544333221          1 257888


Q ss_pred             EEccCCh
Q 017336          263 VECTGNI  269 (373)
Q Consensus       263 id~~g~~  269 (373)
                      +-+.+-+
T Consensus        72 V~S~AI~   78 (96)
T d1p3da1          72 VVSSAIK   78 (96)
T ss_dssp             EECTTSC
T ss_pred             EECCCcC
Confidence            8776643

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.26  E-value=0.026  Score=46.73  Aligned_cols=35  Identities=34%  Similarity=0.305  Sum_probs=31.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      ..++|+|+|+|..|++++..+.+.|. +|+++++++
T Consensus         3 ~~~kV~IiGaG~aGl~~A~~L~~~G~-~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            45789999999999999999999999 899998753

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=94.23  E-value=0.35  Score=36.12  Aligned_cols=95  Identities=17%  Similarity=0.108  Sum_probs=59.6

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCC--CccEEEEcc
Q 017336          190 SSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG--GVDRSVECT  266 (373)
Q Consensus       190 ~~vlI~G-~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~--~~d~vid~~  266 (373)
                      ++|.|+| .|.+|...+..++..|+ .|.+.+++.+........+++.++...... ...+.+.+..+.  .=.+++|+.
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~v~~~~~~~~~~~~iiiD~~   87 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWAVAESILANADVVIVSVPIN-LTLETIERLKPYLTENMLLADLT   87 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGGGHHHHHTTCSEEEECSCGG-GHHHHHHHHGGGCCTTSEEEECC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCC-CcEecccccccccchhhhhccccccccchh-hheeeeecccccccCCceEEEec
Confidence            6899999 69999999999999999 899999887666555555666654433221 233444443332  235788887


Q ss_pred             CChHhHHHHHHHhhcCCcEEEE
Q 017336          267 GNIDNMISAFECVHDGWGVAVL  288 (373)
Q Consensus       267 g~~~~~~~~~~~l~~~~g~~v~  288 (373)
                      .........+....+  .+++.
T Consensus        88 Svk~~~~~~~~~~~~--~~~v~  107 (152)
T d2pv7a2          88 SVKREPLAKMLEVHT--GAVLG  107 (152)
T ss_dssp             SCCHHHHHHHHHHCS--SEEEE
T ss_pred             ccCHHHHHHHHHHcc--CCEEE
Confidence            644333333333333  34543

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=94.20  E-value=0.18  Score=38.53  Aligned_cols=88  Identities=16%  Similarity=0.188  Sum_probs=59.3

Q ss_pred             EEEEECCCHHHHH-HHHHHHHc-CCcEEEEEcCChhHHHHH-HhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          191 SVAVFGLGAVGLA-AAEGARIA-GASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       191 ~vlI~G~g~~G~~-ai~la~~~-g~~~V~~~~~~~~~~~~~-~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      +|.|+|+|..|.- .+..++.. +. .+++++.++++.+.+ ++++...++.  +    +.+    +....+|+|+-|+.
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~--~----~~~----ll~~~iD~V~I~tp   71 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDI-ELVLCTRNPKVLGTLATRYRVSATCT--D----YRD----VLQYGVDAVMIHAA   71 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTE-EEEEECSCHHHHHHHHHHTTCCCCCS--S----TTG----GGGGCCSEEEECSC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEECCHHHHHHHHHhcccccccc--c----HHH----hcccccceeccccc
Confidence            5889999999854 55566555 45 677788887766655 4577654332  1    111    11126899999999


Q ss_pred             ChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          268 NIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       268 ~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ...+.+.+..++..+  .=+++.-
T Consensus        72 ~~~H~~~~~~al~~g--k~V~~EK   93 (167)
T d1xeaa1          72 TDVHSTLAAFFLHLG--IPTFVDK   93 (167)
T ss_dssp             GGGHHHHHHHHHHTT--CCEEEES
T ss_pred             ccccccccccccccc--cccccCC
Confidence            888889999999984  4455544

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.17  E-value=0.13  Score=40.12  Aligned_cols=91  Identities=14%  Similarity=0.174  Sum_probs=60.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCcEEEE-EcCChhHHHH-HHhcCCceee-cCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          191 SVAVFGLGAVGLAAAEGARIA-GASRIIG-VDRSSKRFEE-AKKFGVTDFV-NTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~-g~~~V~~-~~~~~~~~~~-~~~lg~~~vi-~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      +|.|+|+|.+|..-++.++.. ++ .+++ .+++.++.+. +++++..... .+++    +.+.+.   ...+|+|+.++
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~-~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~~----~~~ll~---~~~iD~v~I~t   74 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNA-TISGVASRSLEKAKAFATANNYPESTKIHGS----YESLLE---DPEIDALYVPL   74 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCCTTCEEESS----HHHHHH---CTTCCEEEECC
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCC-EEEEEEeCCccccccchhccccccceeecCc----HHHhhh---ccccceeeecc
Confidence            588999999998877777766 55 5554 4666666444 4556653210 1111    333332   23799999999


Q ss_pred             CChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          267 GNIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       267 g~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ....+.+.+..++..  |.=+++..
T Consensus        75 p~~~h~~~~~~~l~~--g~~v~~EK   97 (184)
T d1ydwa1          75 PTSLHVEWAIKAAEK--GKHILLEK   97 (184)
T ss_dssp             CGGGHHHHHHHHHTT--TCEEEECS
T ss_pred             cchhhcchhhhhhhc--cceeeccc
Confidence            988889999999997  45566644

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=94.15  E-value=0.11  Score=43.08  Aligned_cols=34  Identities=21%  Similarity=0.215  Sum_probs=29.2

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH
Q 017336          191 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR  225 (373)
Q Consensus       191 ~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~  225 (373)
                      +.||+|+ +++|.+.+..+...|+ +|+.++++.++
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~   37 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEG   37 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchH
Confidence            4688887 7999999999999999 89999887554

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=94.10  E-value=0.077  Score=45.44  Aligned_cols=75  Identities=17%  Similarity=0.228  Sum_probs=45.2

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC--Ch---hHHHHHHhcCCceeecCCCCCccHHHHHHHHcCC-CccEE
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR--SS---KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRS  262 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~--~~---~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~-~~d~v  262 (373)
                      .+|||+|+ |-+|...+..+...|. .|+++++  ..   ++.+.+...+--.++.-+-.+   .+.+.+...+ ++|+|
T Consensus         1 ~KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~---~~~l~~~~~~~~~d~V   76 (338)
T d1orra_           1 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN---KNDVTRLITKYMPDSC   76 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTC---HHHHHHHHHHHCCSEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhccCCcEEEEcccCC---HHHHHHHHHhcCCceE
Confidence            36999988 9999999998888898 8988853  12   233334333322222221111   1223333333 78999


Q ss_pred             EEccCC
Q 017336          263 VECTGN  268 (373)
Q Consensus       263 id~~g~  268 (373)
                      |.+.+.
T Consensus        77 ih~aa~   82 (338)
T d1orra_          77 FHLAGQ   82 (338)
T ss_dssp             EECCCC
T ss_pred             Eeeccc
Confidence            998763

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.08  E-value=0.19  Score=41.30  Aligned_cols=34  Identities=32%  Similarity=0.428  Sum_probs=31.0

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      ..+|+|+|+|++|..++..+.+.|.+++..++.+
T Consensus        30 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          30 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            4799999999999999999999999999998754

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.07  E-value=0.13  Score=38.75  Aligned_cols=33  Identities=21%  Similarity=0.314  Sum_probs=29.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR  221 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~  221 (373)
                      .+++|||+|+|.+|.--+..+...|+ +|++++.
T Consensus        12 ~gkrvLViGgG~va~~ka~~Ll~~GA-~VtVvap   44 (150)
T d1kyqa1          12 KDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSP   44 (150)
T ss_dssp             TTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence            67999999999999999999999999 7888843

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=94.05  E-value=0.048  Score=47.41  Aligned_cols=36  Identities=25%  Similarity=0.223  Sum_probs=32.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK  224 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~  224 (373)
                      ++++|||+|+ |-+|...++.+...|+ .|+++++...
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~   43 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAP   43 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCC
Confidence            4699999997 9999999999999999 8999988654

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=94.00  E-value=0.16  Score=38.31  Aligned_cols=87  Identities=15%  Similarity=0.080  Sum_probs=53.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  270 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  270 (373)
                      +|-|+|.|.+|...+.-+...|. .|++.++..++....+..+.... +.      ..+.+    . ..|+||-|+..+.
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~-~~------~~e~~----~-~~diIi~~v~~~~   68 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRSPSTIERARTVGVT-ET------SEEDV----Y-SCPVVISAVTPGV   68 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCCHHHHHHHHHHTCE-EC------CHHHH----H-TSSEEEECSCGGG
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCC-eEEEEcCchhHHHHHhhhccccc-cc------HHHHH----h-hcCeEEEEecCch
Confidence            57889999999999999888998 78888776655554444333221 11      11111    1 4688888887755


Q ss_pred             hHHHHHHHhhcCCcEEEEEc
Q 017336          271 NMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       271 ~~~~~~~~l~~~~g~~v~~g  290 (373)
                      ..+.+.+....-...++.+.
T Consensus        69 ~~~~~~~~~~~~~~~~id~s   88 (152)
T d1i36a2          69 ALGAARRAGRHVRGIYVDIN   88 (152)
T ss_dssp             HHHHHHHHHTTCCSEEEECS
T ss_pred             HHHHHHhhcccCCceeeccC
Confidence            55555444443313444443

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=93.99  E-value=0.049  Score=45.82  Aligned_cols=98  Identities=19%  Similarity=0.103  Sum_probs=64.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC-----C---ceeecCCCCCccHHHHHHHHcCCC
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-----V---TDFVNTSEHDRPIQEVIAEMTNGG  258 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg-----~---~~vi~~~~~~~~~~~~~~~~~~~~  258 (373)
                      ...++|||+|+|. |..+..+++..+..+|.+++.+++=.+.++++-     +   +++-....+   ..+.+++ +..+
T Consensus        74 ~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~D---~~~~l~~-~~~~  148 (274)
T d1iy9a_          74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDD---GFMHIAK-SENQ  148 (274)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESC---SHHHHHT-CCSC
T ss_pred             CCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEech---HHHHHhh-cCCC
Confidence            3568999998765 455566677777679999999999888887742     1   111000111   3334443 3348


Q ss_pred             ccEEEE-ccC---------ChHhHHHHHHHhhcCCcEEEEEc
Q 017336          259 VDRSVE-CTG---------NIDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       259 ~d~vid-~~g---------~~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      +|+|+- ...         +.++++.+.++|+++ |.++.-.
T Consensus       149 yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~-Gv~v~q~  189 (274)
T d1iy9a_         149 YDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQT  189 (274)
T ss_dssp             EEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEEC
T ss_pred             CCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCC-ceEEEec
Confidence            999864 222         347899999999997 9888754

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=93.96  E-value=0.54  Score=35.11  Aligned_cols=95  Identities=8%  Similarity=0.061  Sum_probs=59.1

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhH-HHHH---HhcCCceeecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR-FEEA---KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~-~~~~---~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid  264 (373)
                      .+.|+|+|.|.+|...++.+...|. .|++++.++++ .+.+   ...|...+. -+..+   .+.+++..-..+|.++-
T Consensus         3 knHiII~G~g~~g~~l~~~L~~~~~-~v~vId~d~~~~~~~~~~~~~~~~~vi~-Gd~~d---~~~L~~a~i~~a~~vi~   77 (153)
T d1id1a_           3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVIP-GDSND---SSVLKKAGIDRCRAILA   77 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEEE-SCTTS---HHHHHHHTTTTCSEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCC-CEEEEeccchhHHHHHHHhhcCCcEEEE-ccCcc---hHHHHHhccccCCEEEE
Confidence            4579999999999999999999998 68888777653 2233   334554332 22222   23455543347899999


Q ss_pred             ccCChHh---HHHHHHHhhcCCcEEEEE
Q 017336          265 CTGNIDN---MISAFECVHDGWGVAVLV  289 (373)
Q Consensus       265 ~~g~~~~---~~~~~~~l~~~~g~~v~~  289 (373)
                      +++....   .....+.+.+. -+++.-
T Consensus        78 ~~~~d~~n~~~~~~~r~~~~~-~~iia~  104 (153)
T d1id1a_          78 LSDNDADNAFVVLSAKDMSSD-VKTVLA  104 (153)
T ss_dssp             CSSCHHHHHHHHHHHHHHTSS-SCEEEE
T ss_pred             ccccHHHHHHHHHHHHHhCCC-CceEEE
Confidence            9887432   22334455554 455443

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.94  E-value=0.057  Score=39.09  Aligned_cols=42  Identities=21%  Similarity=0.196  Sum_probs=35.2

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      .+.....++++|+|+|+|.+|+=.++.++.+|. .|..+.+.+
T Consensus        14 ~~~l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~-~vt~i~~~~   55 (121)
T d1mo9a2          14 VEELDYEPGSTVVVVGGSKTAVEYGCFFNATGR-RTVMLVRTE   55 (121)
T ss_dssp             HHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred             HHHHhhCCCCEEEEECCCHHHHHHHHHHHhcch-hheEeeccc
Confidence            344556788999999999999999999999998 888887654

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.92  E-value=0.028  Score=44.62  Aligned_cols=85  Identities=15%  Similarity=0.069  Sum_probs=54.0

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-----eecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-----FVNTSEHDRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~-----vi~~~~~~~~~~~~~~~~~~~~~d~vid  264 (373)
                      ++|.|+|+|..|.+.+.++...|. .|....++++..+.+.+-+...     +..++.-  .+...+.+... +.|+++-
T Consensus         8 ~KI~ViGaG~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i--~~t~~l~~a~~-~ad~iii   83 (189)
T d1n1ea2           8 NKAVVFGSGAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNI--TFTSDVEKAYN-GAEIILF   83 (189)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTE--EEESCHHHHHT-TCSCEEE
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhccccccccccccccccc--ccchhhhhccC-CCCEEEE
Confidence            469999999999998888887776 8999999998888776543211     1000000  00011222222 5799999


Q ss_pred             ccCChHhHHHHHHHh
Q 017336          265 CTGNIDNMISAFECV  279 (373)
Q Consensus       265 ~~g~~~~~~~~~~~l  279 (373)
                      ++.+ ..+...++.+
T Consensus        84 avPs-~~~~~~~~~~   97 (189)
T d1n1ea2          84 VIPT-QFLRGFFEKS   97 (189)
T ss_dssp             CSCH-HHHHHHHHHH
T ss_pred             cCcH-HHHHHHHHHH
Confidence            9987 5555555443

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.90  E-value=0.024  Score=37.68  Aligned_cols=34  Identities=21%  Similarity=0.311  Sum_probs=30.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChh
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  224 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~  224 (373)
                      ++|.|+|+|-+|.+.++-++.+|. ++.+.+.++.
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~-~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGI-AVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTE-EEEEECTTSC
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC-EEEEEcCCCC
Confidence            579999999999999999999999 8888876543

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.88  E-value=0.049  Score=42.52  Aligned_cols=43  Identities=19%  Similarity=0.264  Sum_probs=34.2

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA  229 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~  229 (373)
                      .--++++|||+|+|+++.+++..+...|  +|.++.|+.+|.+.+
T Consensus        14 ~~~~~k~vlIlGaGG~arai~~aL~~~~--~i~I~nR~~~ka~~l   56 (177)
T d1nvta1          14 GRVKDKNIVIYGAGGAARAVAFELAKDN--NIIIANRTVEKAEAL   56 (177)
T ss_dssp             CCCCSCEEEEECCSHHHHHHHHHHTSSS--EEEEECSSHHHHHHH
T ss_pred             CCcCCCEEEEECCcHHHHHHHHHHcccc--ceeeehhhhhHHHHH
Confidence            3357899999999999998877765444  899999998887655

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=93.88  E-value=0.27  Score=37.88  Aligned_cols=101  Identities=22%  Similarity=0.267  Sum_probs=61.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcC-C-hhHHHHHHhcCCceeecCCCCCccHHH-------HHHHHcCCCccE
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDR-S-SKRFEEAKKFGVTDFVNTSEHDRPIQE-------VIAEMTNGGVDR  261 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~-~-~~~~~~~~~lg~~~vi~~~~~~~~~~~-------~~~~~~~~~~d~  261 (373)
                      +|.|.|-|-+|...++++...+--.++++.. + ......+..++.+......+....+.+       ...+.. .++|+
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~-~~vDv   81 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDML-DEADI   81 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH-HTCSE
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhh-cCCCE
Confidence            6889999999999999886554225665532 2 344455556665443222111000000       011111 16999


Q ss_pred             EEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          262 SVECTGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       262 vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      |+||+|.....+.+...+..+ -++++.+...
T Consensus        82 ViEcTG~f~~~~~~~~hl~~G-~K~vi~~~~~  112 (171)
T d1cf2o1          82 VIDCTPEGIGAKNLKMYKEKG-IKAIFQGGEK  112 (171)
T ss_dssp             EEECCSTTHHHHHHHHHHHTT-CEEEECTTSC
T ss_pred             EEEccCCCCCHHHHHHHHHcC-CCEEEECCCC
Confidence            999999877777888889886 7877776543

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=93.87  E-value=0.31  Score=32.98  Aligned_cols=67  Identities=21%  Similarity=0.318  Sum_probs=47.2

Q ss_pred             EEEEECCCHHHHHH-HHHHHHcCCcEEEEEcCCh-hHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336          191 SVAVFGLGAVGLAA-AEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  268 (373)
Q Consensus       191 ~vlI~G~g~~G~~a-i~la~~~g~~~V~~~~~~~-~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  268 (373)
                      +|-++|-|++|..+ +++++..|+ .|.+.|..+ +..+.++++|+.....++..+  +         .++|+|+-+.+-
T Consensus         3 ~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~~--i---------~~~d~vV~SsAI   70 (89)
T d1j6ua1           3 KIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKLGIPIFVPHSADN--W---------YDPDLVIKTPAV   70 (89)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTCCEESSCCTTS--C---------CCCSEEEECTTC
T ss_pred             EEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHCCCeEEeeecccc--c---------CCCCEEEEecCc
Confidence            57778887777754 688899999 899998875 566678999987544333322  1         257888877654


Q ss_pred             h
Q 017336          269 I  269 (373)
Q Consensus       269 ~  269 (373)
                      +
T Consensus        71 ~   71 (89)
T d1j6ua1          71 R   71 (89)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.86  E-value=0.045  Score=39.19  Aligned_cols=34  Identities=29%  Similarity=0.489  Sum_probs=30.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChh
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  224 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~  224 (373)
                      .+|.|+|+|-+|.+.++-|+.+|+ ++++.+.++.
T Consensus        12 ~kigIlGgGQL~rMla~aA~~lG~-~v~v~d~~~~   45 (111)
T d1kjqa2          12 TRVMLLGSGELGKEVAIECQRLGV-EVIAVDRYAD   45 (111)
T ss_dssp             CEEEEESCSHHHHHHHHHHHTTTC-EEEEEESSTT
T ss_pred             CEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcCCCC
Confidence            469999999999999999999999 8888887654

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.77  E-value=0.11  Score=43.78  Aligned_cols=98  Identities=14%  Similarity=0.161  Sum_probs=63.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC--------ceeecCCCCCccHHHHHHHHcCCC
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--------TDFVNTSEHDRPIQEVIAEMTNGG  258 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~--------~~vi~~~~~~~~~~~~~~~~~~~~  258 (373)
                      ...++|||+|+|. |..+-.+++..+..+|++++-+++-.+.++++-.        +++-... .|  ..+.+++ +.++
T Consensus        77 ~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~-~D--a~~~l~~-~~~~  151 (285)
T d2o07a1          77 PNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV-GD--GFEFMKQ-NQDA  151 (285)
T ss_dssp             SSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE-SC--HHHHHHT-CSSC
T ss_pred             cCcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEE-cc--HHHHHhc-CCCC
Confidence            4558999998765 4445566777666799999999998888877421        1110001 11  4445544 3348


Q ss_pred             ccEEEE-ccC---------ChHhHHHHHHHhhcCCcEEEEEc
Q 017336          259 VDRSVE-CTG---------NIDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       259 ~d~vid-~~g---------~~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      +|+||- ...         +.++++.+-+.|+++ |.++.-.
T Consensus       152 yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~  192 (285)
T d2o07a1         152 FDVIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQG  192 (285)
T ss_dssp             EEEEEEECC-----------CHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCEEEEcCCCCCCcccccccHHHHHHHHHhcCCC-CeEEEec
Confidence            999774 221         125788889999997 9887654

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.76  E-value=0.1  Score=42.41  Aligned_cols=82  Identities=18%  Similarity=0.155  Sum_probs=55.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      -.|++|+|.|.|.+|..+++++...|+ +|++++.+..+.+.+.. .|...+ +.++           +..-..|+++=|
T Consensus        37 l~g~~v~IqG~GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~g~~~~-~~~~-----------~~~~~cDIl~Pc  103 (230)
T d1leha1          37 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGADAV-APNA-----------IYGVTCDIFAPC  103 (230)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCEEC-CGGG-----------TTTCCCSEEEEC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhcCCccc-CCcc-----------cccccccEeccc
Confidence            468999999999999999999999999 89999888887766544 555432 1111           111256777766


Q ss_pred             cCChHhHHHHHHHhhc
Q 017336          266 TGNIDNMISAFECVHD  281 (373)
Q Consensus       266 ~g~~~~~~~~~~~l~~  281 (373)
                      .-+...-......|+-
T Consensus       104 A~~~~I~~~~~~~l~a  119 (230)
T d1leha1         104 ALGAVLNDFTIPQLKA  119 (230)
T ss_dssp             SCSCCBSTTHHHHCCC
T ss_pred             ccccccChHHhhccCc
Confidence            5543333344444543

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=93.74  E-value=0.11  Score=41.13  Aligned_cols=89  Identities=21%  Similarity=0.246  Sum_probs=57.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .|++|.|+|.|.+|...+++++.+|+ +|++.++.... +.....+...+   .+    +.+.++     ..|+|.-++.
T Consensus        48 ~gktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~-~~~~~~~~~~~---~~----l~~ll~-----~sD~i~~~~p  113 (193)
T d1mx3a1          48 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSD-GVERALGLQRV---ST----LQDLLF-----HSDCVTLHCG  113 (193)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCT-THHHHHTCEEC---SS----HHHHHH-----HCSEEEECCC
T ss_pred             eCceEEEeccccccccceeeeecccc-ceeeccCcccc-cchhhhccccc---cc----hhhccc-----cCCEEEEeec
Confidence            67899999999999999999999999 89998775433 22233343321   11    333222     2577777655


Q ss_pred             Ch----Hh-HHHHHHHhhcCCcEEEEEcC
Q 017336          268 NI----DN-MISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       268 ~~----~~-~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..    .. -...++.|+++ ..+|.++-
T Consensus       114 lt~~T~~li~~~~l~~mk~~-a~lIN~sR  141 (193)
T d1mx3a1         114 LNEHNHHLINDFTVKQMRQG-AFLVNTAR  141 (193)
T ss_dssp             CCTTCTTSBSHHHHTTSCTT-EEEEECSC
T ss_pred             ccccchhhhhHHHHhccCCC-CeEEecCC
Confidence            22    11 23566777776 66666654

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.69  E-value=0.056  Score=47.82  Aligned_cols=31  Identities=35%  Similarity=0.321  Sum_probs=27.7

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEc
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD  220 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~  220 (373)
                      |++|||+|+ |-+|..++..+...|. .|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEe
Confidence            689999997 9999999999999998 899986

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.64  E-value=0.054  Score=39.14  Aligned_cols=38  Identities=11%  Similarity=0.175  Sum_probs=32.6

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      .++..++|+|+|+|.+|.-+++.++.+|. +|..+.+.+
T Consensus        18 ~l~~p~~v~IiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   55 (117)
T d1onfa2          18 NIKESKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGN   55 (117)
T ss_dssp             TCCCCSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSS
T ss_pred             ccCCCCEEEEECCchHHHHHHHHHHhccc-cceeeehhc
Confidence            34456899999999999999999999999 899997654

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=93.52  E-value=0.12  Score=44.17  Aligned_cols=95  Identities=18%  Similarity=0.193  Sum_probs=63.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC------C---ce--eecCCCCCccHHHHHHHHc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG------V---TD--FVNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg------~---~~--vi~~~~~~~~~~~~~~~~~  255 (373)
                      ...++|||+|+|. |..+-.+++.....+|.+++.+++-.+.++++-      +   ++  ++ .  .  +..+.+++ +
T Consensus        76 ~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~-~--~--Da~~~l~~-~  148 (312)
T d1uira_          76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLV-I--D--DARAYLER-T  148 (312)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEE-E--S--CHHHHHHH-C
T ss_pred             CCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEE-E--c--hHHHHhhh-c
Confidence            3468999998765 555556667665558999999999888887641      1   01  11 1  1  15555654 4


Q ss_pred             CCCccEEEE-c---cC---------ChHhHHHHHHHhhcCCcEEEEE
Q 017336          256 NGGVDRSVE-C---TG---------NIDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       256 ~~~~d~vid-~---~g---------~~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      .+++|+||- .   .+         +.++++.+.++|+++ |.++.-
T Consensus       149 ~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~-Gvlv~~  194 (312)
T d1uira_         149 EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPG-GVMGMQ  194 (312)
T ss_dssp             CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEE-EEEEEE
T ss_pred             CCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCC-ceEEEe
Confidence            448999874 3   12         235788999999997 988754

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.51  E-value=0.043  Score=46.88  Aligned_cols=38  Identities=26%  Similarity=0.317  Sum_probs=32.8

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      .....++|+|+|+|..|+.++..+.+.|. +|++++.++
T Consensus        26 ~~~~pkkV~IIGaG~aGLsaA~~L~~~G~-~V~vlE~~~   63 (370)
T d2iida1          26 ATSNPKHVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASE   63 (370)
T ss_dssp             CCSSCCEEEEECCBHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            44566899999999999999999999998 899998654

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.47  E-value=0.058  Score=38.87  Aligned_cols=35  Identities=17%  Similarity=0.276  Sum_probs=30.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      ..++++|+|+|.+|.-+++.+..+|. +|..+.+.+
T Consensus        21 ~p~~v~IiGgG~ig~E~A~~l~~~G~-~Vtlve~~~   55 (117)
T d1ebda2          21 VPKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAG   55 (117)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             cCCeEEEECCCccceeeeeeeccccc-EEEEEEecc
Confidence            34789999999999999999999999 898887654

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.46  E-value=0.096  Score=42.38  Aligned_cols=105  Identities=15%  Similarity=0.174  Sum_probs=67.8

Q ss_pred             hccCCCCCCEEEEECCCHHHHHHHHHHHHc--CCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHH-
Q 017336          182 NVAKPERGSSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM-  254 (373)
Q Consensus       182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~--g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~-  254 (373)
                      .+.+....++||=+|.+. |..++.+|+.+  +. +|++++.+++..+.+++    .|....+.....+  ..+.+.+. 
T Consensus        53 ~L~~~~~~k~vLEiGt~~-GyStl~~a~al~~~g-~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gd--a~e~l~~~~  128 (219)
T d2avda1          53 NLARLIQAKKALDLGTFT-GYSALALALALPADG-RVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKP--ALETLDELL  128 (219)
T ss_dssp             HHHHHTTCCEEEEECCTT-SHHHHHHHTTSCTTC-EEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESC--HHHHHHHHH
T ss_pred             HHHHccCCCeEEEEechh-hHHHHHHHHhCCCCc-eEEEEeechhHHHHHHHHHHhcCccceEEEEEee--hhhcchhhh
Confidence            345556678999998753 66677777765  33 89999999988777654    4554322222222  44444433 


Q ss_pred             ---cCCCccEEEEccCCh---HhHHHHHHHhhcCCcEEEEEcC
Q 017336          255 ---TNGGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       255 ---~~~~~d~vid~~g~~---~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                         ..+.||.||--....   ..++.+++.|+++ |.++.-+.
T Consensus       129 ~~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~G-Gvii~Dn~  170 (219)
T d2avda1         129 AAGEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLRV  170 (219)
T ss_dssp             HTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             hhcccCCccEEEEeCCHHHHHHHHHHHHHHhcCC-cEEEEeCC
Confidence               233799888654432   4577999999996 88876544

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.41  E-value=0.16  Score=43.91  Aligned_cols=31  Identities=23%  Similarity=0.157  Sum_probs=27.0

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR  221 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~  221 (373)
                      +.|||+|+ |-+|...+..+...|. +|+++++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d~   33 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVADN   33 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEEC
Confidence            67999987 9999999999988998 7888854

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.40  E-value=0.11  Score=40.88  Aligned_cols=98  Identities=13%  Similarity=0.144  Sum_probs=61.8

Q ss_pred             hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc--e--eecCCCCCccHHHHH
Q 017336          180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT--D--FVNTSEHDRPIQEVI  251 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~--~--vi~~~~~~~~~~~~~  251 (373)
                      +.+...+.++++||=+|+|. |..++.+++ .+. +|++++.++...+.+++    .+..  .  ++..+..+       
T Consensus        44 Li~~l~~~~~~~VLDiGcG~-G~~~~~la~-~~~-~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~-------  113 (194)
T d1dusa_          44 LVENVVVDKDDDILDLGCGY-GVIGIALAD-EVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-------  113 (194)
T ss_dssp             HHHHCCCCTTCEEEEETCTT-SHHHHHHGG-GSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-------
T ss_pred             HHHhCCcCCCCeEEEEeecC-ChhHHHHHh-hcc-ccceeeeccccchhHHHHHHHhCCccceEEEEEcchhh-------
Confidence            34556778899999998764 455566665 344 89999999988877764    2332  1  22111110       


Q ss_pred             HHHcCCCccEEEEccC---Ch----HhHHHHHHHhhcCCcEEEEE
Q 017336          252 AEMTNGGVDRSVECTG---NI----DNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       252 ~~~~~~~~d~vid~~g---~~----~~~~~~~~~l~~~~g~~v~~  289 (373)
                       ...++.+|+|+....   +.    .++..+.+.|+++ |++++.
T Consensus       114 -~~~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  156 (194)
T d1dusa_         114 -NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN-GEIWVV  156 (194)
T ss_dssp             -TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             -hhccCCceEEEEcccEEecchhhhhHHHHHHHhcCcC-cEEEEE
Confidence             112237999997322   22    3577888999997 987653

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.38  E-value=0.58  Score=40.48  Aligned_cols=110  Identities=16%  Similarity=0.177  Sum_probs=70.4

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcC--ChhHHHHHHhcCCceeecCCCC---------------
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR--SSKRFEEAKKFGVTDFVNTSEH---------------  243 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~--~~~~~~~~~~lg~~~vi~~~~~---------------  243 (373)
                      .+...+++.+.|+...+|..|.+++..|+.+|.+-++++..  +++|.+.++.+|++.+......               
T Consensus        89 ~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~  168 (355)
T d1jbqa_          89 ERDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRL  168 (355)
T ss_dssp             HHHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHH
T ss_pred             HHcCCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHH
Confidence            34455667777666678999999999999999954444433  5688999999999765421110               


Q ss_pred             ---------------Cc-------cHHHHHHHHcCCCccEEEEccCChHhHH---HHHHHhhcCCcEEEEEcC
Q 017336          244 ---------------DR-------PIQEVIAEMTNGGVDRSVECTGNIDNMI---SAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       244 ---------------~~-------~~~~~~~~~~~~~~d~vid~~g~~~~~~---~~~~~l~~~~g~~v~~g~  291 (373)
                                     +.       .....+.+..++.+|.|+-++|+...+.   ..++...+. -+++.+..
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~-~kii~vep  240 (355)
T d1jbqa_         169 KNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPG-CRIIGVDP  240 (355)
T ss_dssp             HHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEEE
T ss_pred             HHhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCc-ceEEeecc
Confidence                           00       0111222333446899999999765544   444555555 67776654

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=93.33  E-value=0.033  Score=42.33  Aligned_cols=84  Identities=12%  Similarity=-0.058  Sum_probs=51.1

Q ss_pred             EEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhH
Q 017336          193 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM  272 (373)
Q Consensus       193 lI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~  272 (373)
                      -++|+|.+|.+.+..++..+. .+.+.+|+.++.+.+.+.+.....+..+.-            ...|+||-|+.. +.+
T Consensus         3 gfIG~G~mg~~l~~~L~~~~~-~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~------------~~~DiVil~v~d-~~i   68 (153)
T d2i76a2           3 NFVGTGTLTRFFLECLKDRYE-IGYILSRSIDRARNLAEVYGGKAATLEKHP------------ELNGVVFVIVPD-RYI   68 (153)
T ss_dssp             EEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCCCC------------C---CEEECSCT-TTH
T ss_pred             EEEeCcHHHHHHHHHHHhCCC-EEEEEeCChhhhcchhhcccccccchhhhh------------ccCcEEEEeccc-hhh
Confidence            467999999998876655333 445788999988888776654332222210            257999999976 667


Q ss_pred             HHHHHHhhcCCcEEEEEc
Q 017336          273 ISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       273 ~~~~~~l~~~~g~~v~~g  290 (373)
                      ......|+.....++.+.
T Consensus        69 ~~v~~~l~~~~~ivi~~s   86 (153)
T d2i76a2          69 KTVANHLNLGDAVLVHCS   86 (153)
T ss_dssp             HHHHTTTCCSSCCEEECC
T ss_pred             hHHHhhhcccceeeeecc
Confidence            777777765414444443

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.31  E-value=0.34  Score=36.35  Aligned_cols=98  Identities=14%  Similarity=0.305  Sum_probs=63.9

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCcEEEEEcCChhH---HHHHHhcCCceeecCCCCC-ccHH--------------
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIA--GASRIIGVDRSSKR---FEEAKKFGVTDFVNTSEHD-RPIQ--------------  248 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~--g~~~V~~~~~~~~~---~~~~~~lg~~~vi~~~~~~-~~~~--------------  248 (373)
                      ++|.|+|+ |.+|..++.+.++.  .+ +|++++....-   .+.+++|....++..++.. ..+.              
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~   80 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHF-RVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLS   80 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTE-EEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCc-EEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhcccccccc
Confidence            47899998 99999999999987  35 67766554322   3344668887765433221 0011              


Q ss_pred             --HHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEc
Q 017336          249 --EVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       249 --~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                        +.+.+.... ++|+|+.+..+-..+.-.+..++.+  +-+.+.
T Consensus        81 g~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~g--k~iaLA  123 (151)
T d1q0qa2          81 GQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAG--KTILLA  123 (151)
T ss_dssp             SHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTT--CEEEEC
T ss_pred             ChHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcC--CeEEEE
Confidence              223333333 7899999987778888999999984  444443

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=93.30  E-value=0.15  Score=40.28  Aligned_cols=90  Identities=12%  Similarity=0.140  Sum_probs=57.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .++++.|+|.|.+|...+++++.+|. +|++.++...........+...   ..+    +.+.+.     ..|+|..++.
T Consensus        46 ~g~tvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~---~~~----l~~ll~-----~sD~v~l~~p  112 (191)
T d1gdha1          46 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASSSDEASYQATF---HDS----LDSLLS-----VSQFFSLNAP  112 (191)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHHHHTCEE---CSS----HHHHHH-----HCSEEEECCC
T ss_pred             cccceEEeecccchHHHHHHHHhhcc-ccccccccccccchhhcccccc---cCC----HHHHHh-----hCCeEEecCC
Confidence            47999999999999999999999999 8998877544333332322211   111    333232     2578777654


Q ss_pred             Ch----H-hHHHHHHHhhcCCcEEEEEcC
Q 017336          268 NI----D-NMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       268 ~~----~-~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..    . .-...++.|+++ ..+|.++-
T Consensus       113 lt~~T~~li~~~~l~~mk~~-a~lIN~sR  140 (191)
T d1gdha1         113 STPETRYFFNKATIKSLPQG-AIVVNTAR  140 (191)
T ss_dssp             CCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             CCchHhheecHHHhhCcCCc-cEEEecCC
Confidence            21    1 123667778886 77766644

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.21  E-value=0.14  Score=40.31  Aligned_cols=90  Identities=14%  Similarity=0.024  Sum_probs=59.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .++++.|+|.|.+|...+++++.+|. +|+..++........+..+.....   +    +    .+... ..|+|+-+..
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~~~---~----l----~~~l~-~sD~v~~~~p  109 (188)
T d2naca1          43 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWHA---T----R----EDMYP-VCDVVTLNCP  109 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEECS---S----H----HHHGG-GCSEEEECSC
T ss_pred             cccceeeccccccchhhhhhhhccCc-eEEEEeeccccccccccccccccC---C----H----HHHHH-hccchhhccc
Confidence            57899999999999999999999999 899998765555555555543211   1    2    12221 4677776654


Q ss_pred             ChH-----hHHHHHHHhhcCCcEEEEEcC
Q 017336          268 NID-----NMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       268 ~~~-----~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..+     +-...++.|+++ ..+|.++.
T Consensus       110 lt~~T~~li~~~~l~~mk~g-a~lIN~aR  137 (188)
T d2naca1         110 LHPETEHMINDETLKLFKRG-AYIVNTAR  137 (188)
T ss_dssp             CCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             ccccchhhhHHHHHHhCCCC-CEEEecCc
Confidence            221     233667777775 66666544

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.20  E-value=0.21  Score=39.10  Aligned_cols=89  Identities=20%  Similarity=0.224  Sum_probs=59.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      -.++++.|+|.|.+|...+++++.+|. +|++.++...+.. ....+....      +  +.+.++     ..|+|+-++
T Consensus        42 l~~k~vgiiG~G~IG~~va~~~~~fg~-~v~~~d~~~~~~~-~~~~~~~~~------~--l~ell~-----~sDiv~~~~  106 (184)
T d1ygya1          42 IFGKTVGVVGLGRIGQLVAQRIAAFGA-YVVAYDPYVSPAR-AAQLGIELL------S--LDDLLA-----RADFISVHL  106 (184)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCHHH-HHHHTCEEC------C--HHHHHH-----HCSEEEECC
T ss_pred             ccceeeeeccccchhHHHHHHhhhccc-eEEeecCCCChhH-HhhcCceec------c--HHHHHh-----hCCEEEEcC
Confidence            357899999999999999999999999 8999987654432 233343211      1  333332     368888776


Q ss_pred             CChH----h-HHHHHHHhhcCCcEEEEEcC
Q 017336          267 GNID----N-MISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       267 g~~~----~-~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ...+    . =...++.|+++ ..+|.++-
T Consensus       107 Plt~~T~~lin~~~l~~mk~~-a~lIN~sR  135 (184)
T d1ygya1         107 PKTPETAGLIDKEALAKTKPG-VIIVNAAR  135 (184)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred             CCCchhhhhhhHHHHhhhCCC-ceEEEecc
Confidence            5321    2 23667778886 77776654

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=93.10  E-value=0.11  Score=43.37  Aligned_cols=95  Identities=18%  Similarity=0.181  Sum_probs=65.2

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHhcCCce-eecCCCCCccHHHHHHHHcCCCccEEE
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSV  263 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~~~~lg~~~-vi~~~~~~~~~~~~~~~~~~~~~d~vi  263 (373)
                      ..++.+||=+|+|. |..+..+++.. +. ++++++.++...+.+++..... ++..+..+  +     .+..+.+|+|+
T Consensus        82 ~~~~~~iLDiGcG~-G~~~~~l~~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~--l-----~~~~~sfD~v~  152 (268)
T d1p91a_          82 DDKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASSHR--L-----PFSDTSMDAII  152 (268)
T ss_dssp             CTTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCTTS--C-----SBCTTCEEEEE
T ss_pred             CCCCCEEEEeCCCC-cHHHHHHHHHCCCC-EEEEecchHhhhhhhhcccccccceeeehhh--c-----cCCCCCEEEEe
Confidence            45678888888865 66677777766 55 8999999999988887643322 11111111  0     01223799999


Q ss_pred             EccCChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          264 ECTGNIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       264 d~~g~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      .... +..+.+..+.|+|+ |.++....
T Consensus       153 ~~~~-~~~~~e~~rvLkpg-G~l~~~~p  178 (268)
T d1p91a_         153 RIYA-PCKAEELARVVKPG-GWVITATP  178 (268)
T ss_dssp             EESC-CCCHHHHHHHEEEE-EEEEEEEE
T ss_pred             ecCC-HHHHHHHHHHhCCC-cEEEEEee
Confidence            7644 47788999999997 99988754

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.10  E-value=0.057  Score=44.09  Aligned_cols=38  Identities=24%  Similarity=0.263  Sum_probs=33.2

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      ..+.+++|+|+|+|..|+.++..++..|. .|++++.++
T Consensus        45 ~~~~~k~VvIIGaGpAGl~aA~~l~~~G~-~v~l~E~~~   82 (233)
T d1djqa3          45 QTKNKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAE   82 (233)
T ss_dssp             CCSSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             cccCCceEEEEcccHHHHHHHHHHHHhcc-ceeeEeecc
Confidence            34578999999999999999999999999 899997655

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=93.06  E-value=0.081  Score=43.44  Aligned_cols=89  Identities=18%  Similarity=0.201  Sum_probs=58.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-eecCCCCCccHHHHHHHH-cCCCcc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHDRPIQEVIAEM-TNGGVD  260 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~-vi~~~~~~~~~~~~~~~~-~~~~~d  260 (373)
                      .++++||=+|+|. |..+..+++ .|. .|++++.+++.++.+++    .+... ++.   .+      +..+ ..+.||
T Consensus        36 ~~~~~vLDiGCG~-G~~~~~l~~-~g~-~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~---~d------~~~~~~~~~fD  103 (246)
T d1y8ca_          36 LVFDDYLDLACGT-GNLTENLCP-KFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLAC---QD------ISNLNINRKFD  103 (246)
T ss_dssp             CCTTEEEEETCTT-STTHHHHGG-GSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEEC---CC------GGGCCCSCCEE
T ss_pred             CCCCeEEEEeCcC-CHHHHHHHH-hCC-ccEeeccchhhhhhccccccccCccceeec---cc------hhhhccccccc
Confidence            4457899999874 667777765 477 89999999988777654    33321 221   11      1112 234799


Q ss_pred             EEEEccCC------h----HhHHHHHHHhhcCCcEEEE
Q 017336          261 RSVECTGN------I----DNMISAFECVHDGWGVAVL  288 (373)
Q Consensus       261 ~vid~~g~------~----~~~~~~~~~l~~~~g~~v~  288 (373)
                      +|+...+.      .    .++..+.++|+|+ |.+++
T Consensus       104 ~i~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~~i~  140 (246)
T d1y8ca_         104 LITCCLDSTNYIIDSDDLKKYFKAVSNHLKEG-GVFIF  140 (246)
T ss_dssp             EEEECTTGGGGCCSHHHHHHHHHHHHTTEEEE-EEEEE
T ss_pred             ccceeeeeeeccCCHHHHHHHHHHHHHhCCCC-eEEEE
Confidence            99964331      1    2577888899997 98875

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=93.00  E-value=0.16  Score=39.43  Aligned_cols=43  Identities=28%  Similarity=0.340  Sum_probs=37.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  234 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~  234 (373)
                      +|-|+|.|.+|...+.-+...|+ .|++.++++++.+.+.+.+.
T Consensus         3 kIGvIGlG~MG~~ma~~L~~~G~-~V~~~dr~~~~~~~l~~~~~   45 (178)
T d1pgja2           3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMKANA   45 (178)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTT
T ss_pred             EEEEEeehHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCC
Confidence            47889999999998888888899 89999999999988876554

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.00  E-value=0.082  Score=38.46  Aligned_cols=41  Identities=27%  Similarity=0.352  Sum_probs=33.9

Q ss_pred             hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      +...-.++++|+|+|+|.+|+-+++.+..+|. +|..+.+.+
T Consensus        23 ~~~~~~~~k~vvViGgG~iG~E~A~~l~~~g~-~Vtlie~~~   63 (123)
T d1nhpa2          23 QKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILD   63 (123)
T ss_dssp             HHHTCTTCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             HHhhccCCCEEEEECChHHHHHHHHHhhccce-EEEEEEecC
Confidence            33444567899999999999999999999999 898887654

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=92.97  E-value=0.078  Score=40.70  Aligned_cols=95  Identities=16%  Similarity=0.208  Sum_probs=62.4

Q ss_pred             hcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCcc
Q 017336          168 ILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP  246 (373)
Q Consensus       168 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~  246 (373)
                      .+||+....+..|....---.|++|+|+|- ..+|.-...++...|+ +|+.+.+....                     
T Consensus        16 ~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~ga-tVt~~h~~t~~---------------------   73 (166)
T d1b0aa1          16 LRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFTKN---------------------   73 (166)
T ss_dssp             SCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSCSC---------------------
T ss_pred             CCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhc-cccccccccch---------------------
Confidence            344444444433322222347999999997 5899999999999999 78877433211                     


Q ss_pred             HHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          247 IQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       247 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ..+.++     .+|+++-++|.+.++.  -+.++++ ..++.+|..
T Consensus        74 l~~~~~-----~ADivI~a~G~p~~i~--~~~vk~g-~vvIDvGi~  111 (166)
T d1b0aa1          74 LRHHVE-----NADLLIVAVGKPGFIP--GDWIKEG-AIVIDVGIN  111 (166)
T ss_dssp             HHHHHH-----HCSEEEECSCCTTCBC--TTTSCTT-CEEEECCCE
T ss_pred             hHHHHh-----hhhHhhhhccCccccc--ccccCCC-cEEEecCce
Confidence            222222     3799999999876654  3467786 888888764

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=92.95  E-value=0.09  Score=45.87  Aligned_cols=33  Identities=24%  Similarity=0.281  Sum_probs=28.0

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      +.|||+|+ |-+|...+..+...|. .|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence            67899997 9999999999988998 899998743

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=92.91  E-value=0.068  Score=43.78  Aligned_cols=35  Identities=26%  Similarity=0.315  Sum_probs=30.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      +..++|+|+|+|..|++++..+...|. +|.++++.
T Consensus         4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~-~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGSGVIGLSSALILARKGY-SVHILARD   38 (268)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             CCCCcEEEECccHHHHHHHHHHHHCCC-CEEEEeCC
Confidence            345689999999999999999999999 89999864

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.87  E-value=0.087  Score=41.12  Aligned_cols=39  Identities=26%  Similarity=0.325  Sum_probs=33.5

Q ss_pred             EEEEE-CCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH
Q 017336          191 SVAVF-GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  230 (373)
Q Consensus       191 ~vlI~-G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~  230 (373)
                      +|.|+ |+|.+|.+.++.+...|+ +|++.+|++++.+.+.
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l~   41 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAKA   41 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHH
Confidence            57888 569999999999999999 8999999988876653

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.85  E-value=0.043  Score=47.51  Aligned_cols=93  Identities=24%  Similarity=0.248  Sum_probs=52.8

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce---eecCCCCCccHHHHHHHHcC
Q 017336          184 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       184 ~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~---vi~~~~~~~~~~~~~~~~~~  256 (373)
                      ....++++||-+|+|. |.+++.+| +.|+.+|++++.++ ..+.+    ++.+...   ++.-+..+  +     .+..
T Consensus        34 ~~~~~~~~VLDlGcGt-G~ls~~aa-~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~--l-----~~~~  103 (328)
T d1g6q1_          34 KDLFKDKIVLDVGCGT-GILSMFAA-KHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLED--V-----HLPF  103 (328)
T ss_dssp             HHHHTTCEEEEETCTT-SHHHHHHH-HTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTT--S-----CCSS
T ss_pred             cccCCcCEEEEeCCCC-CHHHHHHH-HhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhh--c-----cCcc
Confidence            3456789999999874 56555444 46877999999875 22333    3344322   22221111  0     1122


Q ss_pred             CCccEEEEccC-----Ch----HhHHHHHHHhhcCCcEEE
Q 017336          257 GGVDRSVECTG-----NI----DNMISAFECVHDGWGVAV  287 (373)
Q Consensus       257 ~~~d~vid~~g-----~~----~~~~~~~~~l~~~~g~~v  287 (373)
                      +.+|+|+...-     ..    ..+....++|+|+ |+++
T Consensus       104 ~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~Lkpg-G~ii  142 (328)
T d1g6q1_         104 PKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEG-GLIF  142 (328)
T ss_dssp             SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             cceeEEEEEecceeeccchhHHHHHHHHHhccCCC-eEEE
Confidence            37999876321     11    2344455789997 8774

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.84  E-value=0.61  Score=34.77  Aligned_cols=39  Identities=28%  Similarity=0.405  Sum_probs=31.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhH
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKR  225 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~  225 (373)
                      ..+.+|.|+|+|.+|...+..+...+ +..++.++.++++
T Consensus         4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            35678999999999998888887766 4579999988776

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.81  E-value=0.035  Score=45.39  Aligned_cols=75  Identities=23%  Similarity=0.296  Sum_probs=45.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVE  264 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vid  264 (373)
                      .+++|||+|+ |-+|...++.+...|. .+|++++|++.+...-..-..... .|..+.     +.+.+... ++|+++.
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~-----~~~~~~~~-~~d~vi~   86 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKL-----DDYASAFQ-GHDVGFC   86 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGG-----GGGGGGGS-SCSEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeeccccc-----cccccccc-ccccccc
Confidence            3578999998 9999999998887774 489999886543221111112211 222211     12222222 6899999


Q ss_pred             ccCC
Q 017336          265 CTGN  268 (373)
Q Consensus       265 ~~g~  268 (373)
                      ++|.
T Consensus        87 ~~~~   90 (232)
T d2bkaa1          87 CLGT   90 (232)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            9875

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=92.80  E-value=0.64  Score=35.84  Aligned_cols=136  Identities=17%  Similarity=0.171  Sum_probs=76.2

Q ss_pred             EEEEECCCHHHHH-HHHHHHHcCCc-EEE-EEcCChhHHHH-HHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          191 SVAVFGLGAVGLA-AAEGARIAGAS-RII-GVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       191 ~vlI~G~g~~G~~-ai~la~~~g~~-~V~-~~~~~~~~~~~-~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      +|.|+|+|..|.- .+...+..+-. .++ ++++++++.+. .++++...+++  +    +.+.+.   ...+|+|+.|+
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~--~----~~ell~---~~~id~v~I~t   75 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD--S----YEELLE---SGLVDAVDLTL   75 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES--C----HHHHHH---SSCCSEEEECC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee--e----eecccc---ccccceeeccc
Confidence            6889999999864 46666655421 455 45666666554 45577765542  1    433332   23799999999


Q ss_pred             CChHhHHHHHHHhhcCCcEEEEEcCCCCCceeecc-chhhc--ccceE-EEEeccCCCCCCCHHHHHHHHHcCCC
Q 017336          267 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTL-KGTFFGNYKPRTDLPSVVDMYMNKQL  337 (373)
Q Consensus       267 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~--~~~~i-~g~~~~~~~~~~~~~~~~~~l~~~~l  337 (373)
                      ....+.+.+..++..  |.=+++.-+.....-... .....  ++..+ .+...........+.++.+++.+|++
T Consensus        76 p~~~h~~~~~~al~~--gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v~~~~R~~~~~~~~~~~~~~i~~G~i  148 (181)
T d1zh8a1          76 PVELNLPFIEKALRK--GVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRENSYQKEFEDFYQVVAEGKP  148 (181)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGCCHHHHHHHHHHHHHHSCCC
T ss_pred             ccccccccccccccc--chhhhcCCCCcCCHHHHHHHHHHHHHhCCeEEEEeeccccccCHHHHHHHHHHHCCCC
Confidence            887788888888887  455666443211111111 11111  23333 22221100011246778888898876

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=92.80  E-value=0.049  Score=44.58  Aligned_cols=36  Identities=28%  Similarity=0.295  Sum_probs=31.5

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR  225 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~  225 (373)
                      ++++||+|+ +++|.+.++.+...|+ +|+.+++++++
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~   37 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRREG   37 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCccc
Confidence            478999987 8999999999999999 89999887654

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.74  E-value=0.062  Score=45.64  Aligned_cols=96  Identities=16%  Similarity=0.152  Sum_probs=63.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC--------ce--eecCCCCCccHHHHHHHHcCC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--------TD--FVNTSEHDRPIQEVIAEMTNG  257 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~--------~~--vi~~~~~~~~~~~~~~~~~~~  257 (373)
                      ..++|||+|+|. |..+-.+++..+..+|.+++.+++-.+.++++-.        ++  ++.   .|  ..+.+++ +.+
T Consensus        89 ~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~---~D--a~~~l~~-~~~  161 (295)
T d1inla_          89 NPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI---AN--GAEYVRK-FKN  161 (295)
T ss_dssp             SCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---SC--HHHHGGG-CSS
T ss_pred             CCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEh---hh--HHHHHhc-CCC
Confidence            458999998754 3445566776666689999999998888877421        11  111   11  4444543 334


Q ss_pred             CccEEEE-ccC----------ChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          258 GVDRSVE-CTG----------NIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       258 ~~d~vid-~~g----------~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      .+|+||- +..          +.+++..+.+.|+++ |.++.-..
T Consensus       162 ~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~-Gi~v~q~~  205 (295)
T d1inla_         162 EFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAETE  205 (295)
T ss_dssp             CEEEEEEEC----------CCSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             CCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCC-cEEEEecC
Confidence            8999774 211          236788999999997 98887543

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=92.71  E-value=0.16  Score=41.95  Aligned_cols=100  Identities=12%  Similarity=-0.069  Sum_probs=65.7

Q ss_pred             hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC-CceeecCCCCCccHHHHHHHH--cCCC
Q 017336          182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-VTDFVNTSEHDRPIQEVIAEM--TNGG  258 (373)
Q Consensus       182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg-~~~vi~~~~~~~~~~~~~~~~--~~~~  258 (373)
                      +.....++.+||=+|+|. |..+..++..... .|.+++.+++-.+.+++.- ....+.+...+      +.++  ..+.
T Consensus        87 ~~l~~~~~~~vLD~GcG~-G~~t~~ll~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d------~~~~~~~~~~  158 (254)
T d1xtpa_          87 ASLPGHGTSRALDCGAGI-GRITKNLLTKLYA-TTDLLEPVKHMLEEAKRELAGMPVGKFILAS------METATLPPNT  158 (254)
T ss_dssp             HTSTTCCCSEEEEETCTT-THHHHHTHHHHCS-EEEEEESCHHHHHHHHHHTTTSSEEEEEESC------GGGCCCCSSC
T ss_pred             hhCCCCCCCeEEEecccC-ChhhHHHHhhcCc-eEEEEcCCHHHHHhhhccccccccceeEEcc------ccccccCCCc
Confidence            344556778888899876 7788888877665 8999999999988887642 21122211111      1111  1237


Q ss_pred             ccEEEEccCC-----h---HhHHHHHHHhhcCCcEEEEEc
Q 017336          259 VDRSVECTGN-----I---DNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       259 ~d~vid~~g~-----~---~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      ||+|+..-.-     +   .++..+.+.|+++ |.+++.-
T Consensus       159 fD~I~~~~vl~hl~d~d~~~~l~~~~~~Lkpg-G~iii~e  197 (254)
T d1xtpa_         159 YDLIVIQWTAIYLTDADFVKFFKHCQQALTPN-GYIFFKE  197 (254)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cceEEeeccccccchhhhHHHHHHHHHhcCCC-cEEEEEe
Confidence            9999875321     1   3577889999997 9888753

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=92.70  E-value=0.091  Score=37.75  Aligned_cols=34  Identities=24%  Similarity=0.211  Sum_probs=30.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      .++|+|+|+|.+|+-+++.++.+|. +|..+.+.+
T Consensus        21 p~~vvIiGgG~ig~E~A~~l~~~G~-~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCEEEEECCChhhHHHHHHhhcccc-EEEEEeecc
Confidence            4789999999999999999999999 899997764

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=92.69  E-value=0.096  Score=37.98  Aligned_cols=38  Identities=29%  Similarity=0.413  Sum_probs=33.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChh
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  224 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~  224 (373)
                      ++++++++|+|+|.+|.-++..++.+|. +|..+.++++
T Consensus        27 ~~~~~~vvIIGgG~iG~E~A~~l~~~g~-~Vtli~~~~~   64 (121)
T d1d7ya2          27 LRPQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQPR   64 (121)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             hhcCCeEEEECcchhHHHHHHHhhcccc-eEEEEeeccc
Confidence            4577999999999999999999999998 8998877653

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.62  E-value=0.18  Score=43.07  Aligned_cols=32  Identities=22%  Similarity=0.185  Sum_probs=28.9

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      +++||+|+ |-+|...+..+...|+ .|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECC
Confidence            68999998 9999999999999999 89999874

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=92.62  E-value=0.2  Score=41.94  Aligned_cols=74  Identities=18%  Similarity=0.196  Sum_probs=45.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh-----HHHH---HHhcCCceeecCCCCCccHHHHHHHHcCCC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-----RFEE---AKKFGVTDFVNTSEHDRPIQEVIAEMTNGG  258 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~-----~~~~---~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~  258 (373)
                      +.++|||+|+ |-+|...+..+...|. .|+++.|+..     +.+.   +...+++.+. .+-.+  . +.+.+... +
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~-~d~~d--~-~~~~~~~~-~   75 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIE-ASLDD--H-QRLVDALK-Q   75 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCSSCHHHHHHHHHHHTTTCEEEC-CCSSC--H-HHHHHHHT-T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCCcccchhHHHHHhhhccCCcEEEE-eeccc--c-hhhhhhcc-C
Confidence            4567999997 9999999998888998 7888877532     2222   3344554332 11111  2 22333333 5


Q ss_pred             ccEEEEccC
Q 017336          259 VDRSVECTG  267 (373)
Q Consensus       259 ~d~vid~~g  267 (373)
                      .+.++.+.+
T Consensus        76 ~~~~~~~~~   84 (312)
T d1qyda_          76 VDVVISALA   84 (312)
T ss_dssp             CSEEEECCC
T ss_pred             cchhhhhhh
Confidence            778887765

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.61  E-value=0.093  Score=38.10  Aligned_cols=34  Identities=18%  Similarity=0.299  Sum_probs=30.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      .++++|+|+|.+|+=+++++..+|. +|..+.+.+
T Consensus        23 p~~~vIiG~G~ig~E~A~~l~~lG~-~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCeEEEECCCchHHHHHHHHHhhCc-ceeEEEecc
Confidence            4799999999999999999999999 899887654

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=92.57  E-value=0.19  Score=40.56  Aligned_cols=91  Identities=18%  Similarity=0.169  Sum_probs=58.6

Q ss_pred             EEEEECCCHHHH-HHHHHHHHc-CCcEEEEEcCChhHHH-HHHhcCCce--eecCCCCCccHHHHHHHHcCC-CccEEEE
Q 017336          191 SVAVFGLGAVGL-AAAEGARIA-GASRIIGVDRSSKRFE-EAKKFGVTD--FVNTSEHDRPIQEVIAEMTNG-GVDRSVE  264 (373)
Q Consensus       191 ~vlI~G~g~~G~-~ai~la~~~-g~~~V~~~~~~~~~~~-~~~~lg~~~--vi~~~~~~~~~~~~~~~~~~~-~~d~vid  264 (373)
                      +|.|+|+|.+|. ..+...+.. +++-+.+++++.++.+ .++++|.+.  +..+++.        .++... .+|+|+.
T Consensus        35 riaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d~--------~ell~~~~iD~V~I  106 (221)
T d1h6da1          35 GYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNF--------DKIAKDPKIDAVYI  106 (221)
T ss_dssp             EEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSG--------GGGGGCTTCCEEEE
T ss_pred             EEEEEcCcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCch--------hhhcccccceeeee
Confidence            688999998886 344444433 6633446677776654 445677642  3333331        222223 7999999


Q ss_pred             ccCChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          265 CTGNIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       265 ~~g~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ++....+.+.+.++|..  |.=+++..
T Consensus       107 ~tp~~~H~~~~~~al~~--gk~v~~EK  131 (221)
T d1h6da1         107 ILPNSLHAEFAIRAFKA--GKHVMCEK  131 (221)
T ss_dssp             CSCGGGHHHHHHHHHHT--TCEEEECS
T ss_pred             ccchhhhhhHHHHhhhc--chhhhcCC
Confidence            99988889999999987  56666654

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=92.56  E-value=0.83  Score=38.14  Aligned_cols=110  Identities=16%  Similarity=0.126  Sum_probs=68.7

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEc--CChhHHHHHHhcCCceeecCCCCC--------------
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD--RSSKRFEEAKKFGVTDFVNTSEHD--------------  244 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~--~~~~~~~~~~~lg~~~vi~~~~~~--------------  244 (373)
                      .+...+.++++|+...+|..|++++..++.+|.+-++++.  .++.+.+.++.+|++.++.....+              
T Consensus        52 ~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~  131 (292)
T d2bhsa1          52 EKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANR  131 (292)
T ss_dssp             HHTTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHH
T ss_pred             HHhCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhcccc
Confidence            3445566677666667899999999999999995444443  256888999999997543221110              


Q ss_pred             -----------c--------cHHHHHHHHcCCCccEEEEccCChHhHHHH---HHHhhcCCcEEEEEcC
Q 017336          245 -----------R--------PIQEVIAEMTNGGVDRSVECTGNIDNMISA---FECVHDGWGVAVLVGV  291 (373)
Q Consensus       245 -----------~--------~~~~~~~~~~~~~~d~vid~~g~~~~~~~~---~~~l~~~~g~~v~~g~  291 (373)
                                 .        .....+.+..++.+|+++-++|+...+.-.   ++.+.+. .+++.+..
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~-~~i~~Vep  199 (292)
T d2bhsa1         132 GEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKP-VTIVGLQP  199 (292)
T ss_dssp             TSSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSC-CEEEEEEE
T ss_pred             ccccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCc-ceEEEecc
Confidence                       0        011122233344689999998876655534   4444454 66665543

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.56  E-value=0.061  Score=44.67  Aligned_cols=33  Identities=27%  Similarity=0.395  Sum_probs=29.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      .|+|+|+|..|++++.++++.|...|.++++++
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            689999999999999999999976888887754

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.52  E-value=0.15  Score=39.33  Aligned_cols=95  Identities=19%  Similarity=0.246  Sum_probs=63.4

Q ss_pred             hhcccchhhhhhhhhhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCC
Q 017336          167 CILSCGVSTGLGATLNVAKP-ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD  244 (373)
Q Consensus       167 a~~~~~~~ta~~~l~~~~~~-~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~  244 (373)
                      +.+||+....+.. ++.-++ -.|++|+|+|. ..+|.-...++...|+ +|+.+.+....                   
T Consensus        17 ~~~PcTp~aii~l-L~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~ga-tVt~~~~~t~~-------------------   75 (170)
T d1a4ia1          17 CFIPCTPKGCLEL-IKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKTAH-------------------   75 (170)
T ss_dssp             CCCCHHHHHHHHH-HHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTCSS-------------------
T ss_pred             CCCCChHHHHHHH-HHHhCcccccceEEEEecCCccchHHHHHHHhccC-ceEEEeccccc-------------------
Confidence            3455554444443 333333 47899999997 5899999999999999 88887543222                   


Q ss_pred             ccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          245 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       245 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                        .    .+.+. ..|+++-++|.+.++.  -+.++++ ..++.+|..
T Consensus        76 --l----~~~~~-~aDivi~a~G~~~~i~--~~~vk~g-~iviDvgi~  113 (170)
T d1a4ia1          76 --L----DEEVN-KGDILVVATGQPEMVK--GEWIKPG-AIVIDCGIN  113 (170)
T ss_dssp             --H----HHHHT-TCSEEEECCCCTTCBC--GGGSCTT-CEEEECCCB
T ss_pred             --H----HHHHh-hccchhhccccccccc--cccccCC-CeEeccCcc
Confidence              1    11111 5789999998876644  4577886 788877764

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.48  E-value=0.13  Score=43.41  Aligned_cols=103  Identities=17%  Similarity=0.194  Sum_probs=57.3

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCc--EEEEEcCChhHHH----HHHhc---CCce-e--ecCCCCCccHHHHHHHHcC
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGAS--RIIGVDRSSKRFE----EAKKF---GVTD-F--VNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~--~V~~~~~~~~~~~----~~~~l---g~~~-v--i~~~~~~~~~~~~~~~~~~  256 (373)
                      +.|||+|+ +++|.+++..+...|++  .|..+.++.++.+    .++++   +... .  .|..+. .+..+.+.+...
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~   81 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDS-KSVAAARERVTE   81 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCH-HHHHHHHHTCTT
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccch-Hhhhhhhhhccc
Confidence            34577787 89999999888888984  2333344433322    23333   2221 1  233222 123333444444


Q ss_pred             CCccEEEEccCCh----------H---------------hHHHHHHHhhc-CCcEEEEEcCCC
Q 017336          257 GGVDRSVECTGNI----------D---------------NMISAFECVHD-GWGVAVLVGVPS  293 (373)
Q Consensus       257 ~~~d~vid~~g~~----------~---------------~~~~~~~~l~~-~~g~~v~~g~~~  293 (373)
                      +..|+++++.|..          +               ....++..|.. ++|+++.+++..
T Consensus        82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~  144 (285)
T d1jtva_          82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVG  144 (285)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGG
T ss_pred             cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechh
Confidence            5899999988742          1               23344455532 238999887653

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.46  E-value=1.1  Score=32.77  Aligned_cols=74  Identities=22%  Similarity=0.412  Sum_probs=43.1

Q ss_pred             EEEEECC-CHHHHHHHHHHHH-cCCcEEEE-EcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          191 SVAVFGL-GAVGLAAAEGARI-AGASRIIG-VDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       191 ~vlI~G~-g~~G~~ai~la~~-~g~~~V~~-~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      +|.|.|+ |-+|...++.+.. .+. .+++ +++.+ ...                         .....++|++||++.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~-~l~~~~d~~~-~~~-------------------------~~~~~~~DvvIDFS~   53 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDL-TLSAELDAGD-PLS-------------------------LLTDGNTEVVIDFTH   53 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTS-EEEEEECTTC-CTH-------------------------HHHTTTCSEEEECCC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEecCC-chh-------------------------hhccccCCEEEEccc
Confidence            5889997 9999998888765 466 4443 33211 001                         111125788888875


Q ss_pred             ChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          268 NIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       268 ~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      . +.....++..... |.-+.+|.++
T Consensus        54 p-~~~~~~~~~~~~~-~~~~ViGTTG   77 (135)
T d1yl7a1          54 P-DVVMGNLEFLIDN-GIHAVVGTTG   77 (135)
T ss_dssp             T-TTHHHHHHHHHHT-TCEEEECCCC
T ss_pred             H-HHHHHHHHHHHhc-CCCEEEeccc
Confidence            5 4444444444443 5666667665

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=92.46  E-value=0.61  Score=36.01  Aligned_cols=96  Identities=21%  Similarity=0.212  Sum_probs=58.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCcEEEEEcC-C-hhHHHHHHhcCCceeecCCC----------CCccHHHHHHHHcCC
Q 017336          191 SVAVFGLGAVGLAAAEGARIA-GASRIIGVDR-S-SKRFEEAKKFGVTDFVNTSE----------HDRPIQEVIAEMTNG  257 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~-g~~~V~~~~~-~-~~~~~~~~~lg~~~vi~~~~----------~~~~~~~~~~~~~~~  257 (373)
                      +|.|.|.|-+|...++.+... +. .++++.. . ......+...+.......+.          ....+....     .
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~di-evVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~-----~   76 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDM-KLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLI-----K   76 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHH-----H
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCC-EEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhh-----h
Confidence            588999999999999998865 45 6766633 2 23333343333322111100          001121111     1


Q ss_pred             CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          258 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       258 ~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      ++|+|+||+|.....+.+...+..+ -++++.+...
T Consensus        77 ~vDiViecTG~f~~~e~a~~hl~~G-~KvIi~~~~~  111 (178)
T d1b7go1          77 TSDIVVDTTPNGVGAQYKPIYLQLQ-RNAIFQGGEK  111 (178)
T ss_dssp             HCSEEEECCSTTHHHHHHHHHHHTT-CEEEECTTSC
T ss_pred             cCCEEEECCCCcCCHHHHHHHHHcC-CEEEEECCCC
Confidence            5899999999876777888888886 6777765543

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=92.44  E-value=0.65  Score=36.73  Aligned_cols=94  Identities=15%  Similarity=0.075  Sum_probs=61.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      .||=+|+|. |..++.+|+..--..+++++.+....+.+    ++.+.+.+-....+   .......+..+.+|.|+-..
T Consensus        32 lvLeIGcG~-G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~D---a~~l~~~~~~~~~d~v~i~f  107 (204)
T d2fcaa1          32 IHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNID---ADTLTDVFEPGEVKRVYLNF  107 (204)
T ss_dssp             EEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCC---GGGHHHHCCTTSCCEEEEES
T ss_pred             eEEEEEecC-cHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccc---hhhhhcccCchhhhcccccc
Confidence            455568876 88888899887433899999998776655    44676654222221   11122223334788877654


Q ss_pred             CC--------------hHhHHHHHHHhhcCCcEEEEE
Q 017336          267 GN--------------IDNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       267 g~--------------~~~~~~~~~~l~~~~g~~v~~  289 (373)
                      ..              +++++.+.+.|+|+ |.+.+.
T Consensus       108 p~P~~k~~h~k~Rl~~~~~l~~~~r~Lkpg-G~l~i~  143 (204)
T d2fcaa1         108 SDPWPKKRHEKRRLTYSHFLKKYEEVMGKG-GSIHFK  143 (204)
T ss_dssp             CCCCCSGGGGGGSTTSHHHHHHHHHHHTTS-CEEEEE
T ss_pred             ccccchhhhcchhhhHHHHHHHHHHhCCCC-cEEEEE
Confidence            43              36888999999997 998775

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=92.37  E-value=0.1  Score=37.65  Aligned_cols=35  Identities=20%  Similarity=0.282  Sum_probs=30.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      .+++++|+|+|.+|+=.++++..+|. +|..+.+.+
T Consensus        21 ~p~~i~IiG~G~ig~E~A~~l~~~G~-~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIGAGVIGLELGSVWARLGA-EVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEEeec
Confidence            45889999999999999999999999 788886653

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=92.34  E-value=0.17  Score=43.35  Aligned_cols=99  Identities=18%  Similarity=0.187  Sum_probs=60.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHc--CCCcc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT--NGGVD  260 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~--~~~~d  260 (373)
                      .+|++||=+++|. |..++++|+  |+..|++++.+++..+.+++    .|.+.+- ....+  ..+.++.+.  ++.||
T Consensus       144 ~~g~rVLDl~~gt-G~~s~~~a~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~-~i~~d--~~~~~~~~~~~~~~fD  217 (318)
T d1wxxa2         144 FRGERALDVFSYA-GGFALHLAL--GFREVVAVDSSAEALRRAEENARLNGLGNVR-VLEAN--AFDLLRRLEKEGERFD  217 (318)
T ss_dssp             CCEEEEEEETCTT-THHHHHHHH--HEEEEEEEESCHHHHHHHHHHHHHTTCTTEE-EEESC--HHHHHHHHHHTTCCEE
T ss_pred             hCCCeeeccCCCC-cHHHHHHHh--cCCcEEeecchHHHHHHHHHHHHHcCCCCcc-eeecc--HHHHhhhhHhhhcCCC
Confidence            3688998887643 333445554  33489999999999888864    4554221 11111  333333332  23799


Q ss_pred             EEEEccC-----C----------hHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          261 RSVECTG-----N----------IDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       261 ~vid~~g-----~----------~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      +|+--..     .          .+++..+.+.|+|+ |.++.+...
T Consensus       218 ~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpG-G~Lv~~scs  263 (318)
T d1wxxa2         218 LVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEG-GILATASCS  263 (318)
T ss_dssp             EEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEE-EEEEEEECC
T ss_pred             EEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeCC
Confidence            9885211     1          13566788899997 999887654

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=92.30  E-value=0.19  Score=43.16  Aligned_cols=71  Identities=17%  Similarity=0.218  Sum_probs=43.7

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC----ChhHHHHHHhc---CCcee-ecCCCCCccHHHHHHHHcCC-Ccc
Q 017336          191 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDR----SSKRFEEAKKF---GVTDF-VNTSEHDRPIQEVIAEMTNG-GVD  260 (373)
Q Consensus       191 ~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~----~~~~~~~~~~l---g~~~v-i~~~~~~~~~~~~~~~~~~~-~~d  260 (373)
                      +|||+|+ |-+|...+..+...|. .|+++++    ........+.+   ++..+ .|..+    . +.+.+.... ++|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d----~-~~l~~~~~~~~~d   75 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN----E-ALMTEILHDHAID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTC----H-HHHHHHHHHTTCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCC----H-HHHHHHHhccCCC
Confidence            5999987 9999999999999998 7888864    22222322222   33322 22222    1 223333222 799


Q ss_pred             EEEEccC
Q 017336          261 RSVECTG  267 (373)
Q Consensus       261 ~vid~~g  267 (373)
                      +||++++
T Consensus        76 ~ViHlAa   82 (338)
T d1udca_          76 TVIHFAG   82 (338)
T ss_dssp             EEEECCS
T ss_pred             EEEECCC
Confidence            9999875

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.23  E-value=0.074  Score=45.38  Aligned_cols=36  Identities=25%  Similarity=0.386  Sum_probs=31.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      ++..+|+|+|+|..|+.|+..+...|. +|++++.++
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~-~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            456779999999999999999999999 899997653

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.13  E-value=0.11  Score=41.94  Aligned_cols=97  Identities=12%  Similarity=-0.011  Sum_probs=63.0

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC----CceeecCCCCCccHHHHHHHH--cCC
Q 017336          184 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG----VTDFVNTSEHDRPIQEVIAEM--TNG  257 (373)
Q Consensus       184 ~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg----~~~vi~~~~~~~~~~~~~~~~--~~~  257 (373)
                      ....++.+||=+|+|. |..+..+++..+. +|++++.+++-.+.+++..    ...+ .+...+      +.++  ..+
T Consensus        56 ~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~ak~~~~~~~~~~~-~f~~~d------~~~~~~~~~  126 (222)
T d2ex4a1          56 PNKTGTSCALDCGAGI-GRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEGKRVR-NYFCCG------LQDFTPEPD  126 (222)
T ss_dssp             --CCCCSEEEEETCTT-THHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGGGGEE-EEEECC------GGGCCCCSS
T ss_pred             cCCCCCCEEEEeccCC-CHhhHHHHHhcCC-EEEEeecCHHHhhcccccccccccccc-cccccc------ccccccccc
Confidence            3456778899999875 6677777766665 8999999999888887632    2221 111111      1111  123


Q ss_pred             CccEEEEcc-----CCh---HhHHHHHHHhhcCCcEEEEEc
Q 017336          258 GVDRSVECT-----GNI---DNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       258 ~~d~vid~~-----g~~---~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      .+|+|+...     ..+   ..+..+.+.|+++ |.+++..
T Consensus       127 ~fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~-G~~~i~~  166 (222)
T d2ex4a1         127 SYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPN-GIIVIKD  166 (222)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cccccccccccccchhhhhhhHHHHHHHhcCCc-ceEEEEE
Confidence            799999842     222   4677889999997 9888763

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=92.12  E-value=0.054  Score=44.38  Aligned_cols=33  Identities=27%  Similarity=0.446  Sum_probs=28.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      +|+|+|+|..|+.++..+++.|.+.|+++++++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            489999999999999999999975699997754

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.08  E-value=0.041  Score=47.15  Aligned_cols=31  Identities=23%  Similarity=0.328  Sum_probs=27.5

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR  221 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~  221 (373)
                      ++|||+|+ |-+|...+..+...|. .|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence            68999998 9999999999888898 8988864

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.94  E-value=0.14  Score=37.74  Aligned_cols=38  Identities=24%  Similarity=0.281  Sum_probs=33.2

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      .+.++++|+|+|+|.+|.-++..++.+|. .|..+.+.+
T Consensus        31 ~~~~~k~v~VIGgG~iG~E~A~~l~~~g~-~Vtvie~~~   68 (133)
T d1q1ra2          31 QLIADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAA   68 (133)
T ss_dssp             TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             hhccCCEEEEECCchHHHHHHHHHHhhCc-ceeeeeecc
Confidence            45667999999999999999999999999 899997654

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.88  E-value=0.19  Score=42.09  Aligned_cols=94  Identities=19%  Similarity=0.217  Sum_probs=60.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC-Cc-------------e--eecCCCCCccHHHH
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-VT-------------D--FVNTSEHDRPIQEV  250 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg-~~-------------~--vi~~~~~~~~~~~~  250 (373)
                      ...++|||+|+|. |..+-.+++. +..+|.+++.+++=.+.++++- ..             +  ++.   .+  ..+.
T Consensus        71 ~~p~~vLiiG~G~-G~~~~~~l~~-~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~---~D--a~~~  143 (276)
T d1mjfa_          71 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI---GD--GFEF  143 (276)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE---SC--HHHH
T ss_pred             CCCceEEEecCCc-hHHHHHHHHh-CCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEE---Ch--HHHH
Confidence            4568999998754 2333444554 4458999999999888887632 11             1  111   11  4444


Q ss_pred             HHHHcCCCccEEEE-ccC---------ChHhHHHHHHHhhcCCcEEEEEc
Q 017336          251 IAEMTNGGVDRSVE-CTG---------NIDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       251 ~~~~~~~~~d~vid-~~g---------~~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      +++  .+++|+||. +..         +.+++..+.++|+++ |.++.-+
T Consensus       144 l~~--~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~-Gv~v~q~  190 (276)
T d1mjfa_         144 IKN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQA  190 (276)
T ss_dssp             HHH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             Hhc--cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCC-ceEEEec
Confidence            543  358999774 332         236788999999997 9887643

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=91.84  E-value=0.26  Score=41.31  Aligned_cols=32  Identities=31%  Similarity=0.431  Sum_probs=29.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEc
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD  220 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~  220 (373)
                      .+++|+|.|.|.+|..+++++...|+ +|++++
T Consensus        35 ~gktvaIqGfGnVG~~~A~~L~e~Ga-kvv~vs   66 (293)
T d1hwxa1          35 GDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVG   66 (293)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEE
Confidence            57899999999999999999999999 888875

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=91.81  E-value=0.16  Score=41.74  Aligned_cols=93  Identities=17%  Similarity=0.170  Sum_probs=59.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc-ee--e--cCCCCCccHHHHHHHHcC
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DF--V--NTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~-~v--i--~~~~~~~~~~~~~~~~~~  256 (373)
                      ++++++||=+|+|. |..+..+++. |...|++++.+++.++.+++    .+.. .+  +  |.....  +      ..+
T Consensus        22 ~~~~~~VLDlGCG~-G~~~~~~~~~-~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~--~------~~~   91 (252)
T d1ri5a_          22 TKRGDSVLDLGCGK-GGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRH--M------DLG   91 (252)
T ss_dssp             CCTTCEEEEETCTT-TTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSC--C------CCS
T ss_pred             CCCcCEEEEecccC-cHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhc--c------ccc
Confidence            57899999999875 5556677665 44489999999998888764    3322 11  1  111111  0      012


Q ss_pred             CCccEEEEccCC------h----HhHHHHHHHhhcCCcEEEEE
Q 017336          257 GGVDRSVECTGN------I----DNMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       257 ~~~d~vid~~g~------~----~~~~~~~~~l~~~~g~~v~~  289 (373)
                      +.||+|+....-      .    ..+..+.+.|+++ |.++..
T Consensus        92 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~g-G~~i~~  133 (252)
T d1ri5a_          92 KEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPG-GYFIMT  133 (252)
T ss_dssp             SCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEE-EEEEEE
T ss_pred             ccceEEEEcceeeecCCCHHHHHHHHHHHhceeCCC-CEEEEE
Confidence            379999875332      1    2456677889997 988764

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=91.79  E-value=0.088  Score=38.29  Aligned_cols=36  Identities=22%  Similarity=0.276  Sum_probs=31.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChh
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  224 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~  224 (373)
                      .+++++|+|+|.+|+=++++++.+|. +|.++.+++.
T Consensus        24 ~p~~~viiG~G~iglE~A~~~~~~G~-~Vtvi~~~~~   59 (123)
T d1dxla2          24 IPKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFASE   59 (123)
T ss_dssp             CCSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred             cCCeEEEEccchHHHHHHHHHHhcCC-eEEEEEEccc
Confidence            45899999999999999999999999 8999977543

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.78  E-value=0.38  Score=37.22  Aligned_cols=88  Identities=10%  Similarity=0.046  Sum_probs=49.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChh--HHHHHHhcCCceeecC--CCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTDFVNT--SEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~--~~~~~~~lg~~~vi~~--~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      +|.|+|+|..|.+.+..+-..|. .|....+..+  ..+.+.+-.-...+..  ..........+.+.. ...|+|+.++
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~ad~Ii~av   79 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCL-ENAEVVLLGV   79 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHH-TTCSEEEECS
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHH-hccchhhccc
Confidence            58899999999998888887787 8888876433  3333332111000000  000000111222322 2589999999


Q ss_pred             CChHhHHHHHHHhhc
Q 017336          267 GNIDNMISAFECVHD  281 (373)
Q Consensus       267 g~~~~~~~~~~~l~~  281 (373)
                      .. ..+...++.+.+
T Consensus        80 ps-~~~~~~~~~l~~   93 (180)
T d1txga2          80 ST-DGVLPVMSRILP   93 (180)
T ss_dssp             CG-GGHHHHHHHHTT
T ss_pred             ch-hhhHHHHHhhcc
Confidence            87 455555554444

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.75  E-value=0.063  Score=45.16  Aligned_cols=32  Identities=28%  Similarity=0.411  Sum_probs=29.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      .|+|+|+|+.|++++..+++.|. +|+++++.+
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~-~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGI-DNVILERQT   35 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSSC
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            59999999999999999999999 899998765

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=91.74  E-value=0.092  Score=45.03  Aligned_cols=34  Identities=15%  Similarity=0.270  Sum_probs=30.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      .++|+|+|||..|+.++..+...|. +|++++.++
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~k~G~-~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCEEEEECCcHHHHHHHHHHHhCCC-CEEEEECCC
Confidence            5789999999999999999998898 899997654

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=91.72  E-value=0.17  Score=40.10  Aligned_cols=72  Identities=25%  Similarity=0.319  Sum_probs=45.7

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc-eeecCCCCCccHHHHHHHHcCCCc
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGV  259 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~-~vi~~~~~~~~~~~~~~~~~~~~~  259 (373)
                      ....++ .|++||=+|+|. |.+++. |...|+.+|++++.+++..+.+++.-.. .++..+     +    .+ .+++|
T Consensus        42 ~~~~dl-~Gk~VLDlGcGt-G~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D-----~----~~-l~~~f  108 (197)
T d1ne2a_          42 YNDGNI-GGRSVIDAGTGN-GILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVAD-----V----SE-ISGKY  108 (197)
T ss_dssp             HHHTSS-BTSEEEEETCTT-CHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECC-----G----GG-CCCCE
T ss_pred             HHcCCC-CCCEEEEeCCCC-cHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEEEe-----h----hh-cCCcc
Confidence            344455 589999998763 444443 4456777899999999999888773221 222211     1    11 23589


Q ss_pred             cEEEEc
Q 017336          260 DRSVEC  265 (373)
Q Consensus       260 d~vid~  265 (373)
                      |+||-.
T Consensus       109 D~Vi~N  114 (197)
T d1ne2a_         109 DTWIMN  114 (197)
T ss_dssp             EEEEEC
T ss_pred             eEEEeC
Confidence            999864

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=91.66  E-value=0.13  Score=36.75  Aligned_cols=34  Identities=26%  Similarity=0.339  Sum_probs=30.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      +++++|+|+|.+|.-+++.++.+|. +|..+.+.+
T Consensus        21 p~~vvIiGgG~~G~E~A~~l~~~g~-~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARE   54 (115)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCeEEEECCCHHHHHHHHHHhhccc-ceEEEeeec
Confidence            4789999999999999999999999 898887654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=91.53  E-value=0.081  Score=44.02  Aligned_cols=31  Identities=16%  Similarity=0.281  Sum_probs=27.8

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          191 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       191 ~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      +|||+|+ |-+|...+..++..|. .|++++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~   34 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNV-EVIPTDVQ   34 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSE-EEEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEeech
Confidence            5899998 9999999999999998 89999765

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.50  E-value=0.15  Score=37.09  Aligned_cols=34  Identities=15%  Similarity=0.154  Sum_probs=30.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      .++++|+|+|.+|+-+++.++.+|. +|..+.+++
T Consensus        22 pk~vvIvGgG~iG~E~A~~l~~~G~-~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCEEEEEcCCccHHHHHHHHhcCCc-EEEEEeecc
Confidence            4789999999999999999999999 899997754

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.40  E-value=0.1  Score=43.23  Aligned_cols=42  Identities=24%  Similarity=0.264  Sum_probs=32.2

Q ss_pred             CCCEEEEECC-CHHHHHHHH-HHHH--cCCcEEEEEcCChhHHHHHH
Q 017336          188 RGSSVAVFGL-GAVGLAAAE-GARI--AGASRIIGVDRSSKRFEEAK  230 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~-la~~--~g~~~V~~~~~~~~~~~~~~  230 (373)
                      .|+.+||+|+ +++|.++++ ||+.  .|+ +|+.+++++++++.+.
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~~   50 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLK   50 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHHH
Confidence            4677888888 799998665 4553  588 8999999998877653

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=91.39  E-value=0.73  Score=38.93  Aligned_cols=99  Identities=18%  Similarity=0.155  Sum_probs=66.3

Q ss_pred             hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcC--ChhHHHHHHhcCCceeecCCCC----------------
Q 017336          182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR--SSKRFEEAKKFGVTDFVNTSEH----------------  243 (373)
Q Consensus       182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~--~~~~~~~~~~lg~~~vi~~~~~----------------  243 (373)
                      +...+.++++|+...+|..|.+++..++.+|.+-++++..  +..|.+.++.+|+..+......                
T Consensus        54 ~~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~~~~~~~~~~~~~~~~~~~~~  133 (310)
T d1y7la1          54 KDGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASD  133 (310)
T ss_dssp             HTTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHC
T ss_pred             HcCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEeccCccccchhhHHHHHHHHhh
Confidence            4455677777766678999999999999999965555533  4578888888998765321110                


Q ss_pred             -----------Cc--------cHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhh
Q 017336          244 -----------DR--------PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH  280 (373)
Q Consensus       244 -----------~~--------~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~  280 (373)
                                 +.        .....+.+..++.+|+|+.++|+...+.-....++
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk  189 (310)
T d1y7la1         134 PSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIK  189 (310)
T ss_dssp             TTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHH
T ss_pred             cCccccCCCCcchhhHHHhhhhHHHHHHHhcCCCCCEEEecCcCCcchhHHHHHHH
Confidence                       00        01223344445579999999998776666666664

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=91.32  E-value=0.14  Score=39.22  Aligned_cols=36  Identities=28%  Similarity=0.395  Sum_probs=30.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCc-EEEEEcCCh
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSS  223 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~-~V~~~~~~~  223 (373)
                      .|++|+|+|+|..|+.+++.++..+.+ +|+++++++
T Consensus         1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            378999999999999999999888753 788887654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.30  E-value=0.12  Score=37.45  Aligned_cols=34  Identities=24%  Similarity=0.102  Sum_probs=29.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      ..++++|+|+|.+|+=.+++++.+|. .|..+.++
T Consensus        19 ~P~~vvIIGgG~iG~E~A~~l~~lG~-~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVGASYVALECAGFLAGIGL-DVTVMVRS   52 (122)
T ss_dssp             CCCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             CCCeEEEECCCccHHHHHHHHhhcCC-eEEEEEec
Confidence            34689999999999999999999999 77777653

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.28  E-value=0.12  Score=44.04  Aligned_cols=44  Identities=23%  Similarity=0.240  Sum_probs=33.7

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh--HHHHHHhcCC
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGV  234 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~--~~~~~~~lg~  234 (373)
                      ++|||+|+ |-+|...+..+...|+ +|+++++...  ..+.++.++.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~l~~~~~   47 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGI   47 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcccHHHHHHhcc
Confidence            58999998 9999999998888899 8999987542  3344555544

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=91.18  E-value=0.16  Score=36.99  Aligned_cols=35  Identities=23%  Similarity=0.289  Sum_probs=30.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      +.+++++|+|+|.+|+=.+++.+.+|. +|..+.+.
T Consensus        24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~-~Vtive~~   58 (125)
T d1ojta2          24 EVPGKLLIIGGGIIGLEMGTVYSTLGS-RLDVVEMM   58 (125)
T ss_dssp             CCCSEEEEESCSHHHHHHHHHHHHHTC-EEEEECSS
T ss_pred             ccCCeEEEECCCHHHHHHHHHhhcCCC-EEEEEEee
Confidence            345899999999999999999999999 88888664

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=91.08  E-value=0.79  Score=33.01  Aligned_cols=92  Identities=9%  Similarity=0.076  Sum_probs=60.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      +.++|+|.|.+|..++..++  +. .|++++.++++.+.++..|...+. -+..+   .+.+++..-..++.++-+....
T Consensus         1 kHivI~G~g~~g~~l~~~L~--~~-~i~vi~~d~~~~~~~~~~~~~~i~-Gd~~~---~~~L~~a~i~~A~~vi~~~~~d   73 (129)
T d2fy8a1           1 RHVVICGWSESTLECLRELR--GS-EVFVLAEDENVRKKVLRSGANFVH-GDPTR---VSDLEKANVRGARAVIVNLESD   73 (129)
T ss_dssp             CCEEEESCCHHHHHHHHTSC--GG-GEEEEESCTTHHHHHHHTTCEEEE-SCTTS---HHHHHHTTCTTCSEEEECCSSH
T ss_pred             CEEEEECCCHHHHHHHHHHc--CC-CCEEEEcchHHHHHHHhcCccccc-cccCC---HHHHHHhhhhcCcEEEEeccch
Confidence            46899999999998877664  33 567788899998988888876543 22222   2345554333789999888764


Q ss_pred             H---hHHHHHHHhhcCCcEEEEE
Q 017336          270 D---NMISAFECVHDGWGVAVLV  289 (373)
Q Consensus       270 ~---~~~~~~~~l~~~~g~~v~~  289 (373)
                      .   ......+.+.|. .+++..
T Consensus        74 ~~n~~~~~~~r~~~~~-~~iia~   95 (129)
T d2fy8a1          74 SETIHCILGIRKIDES-VRIIAE   95 (129)
T ss_dssp             HHHHHHHHHHHHHCSS-SCEEEE
T ss_pred             hhhHHHHHHHHHHCCC-ceEEEE
Confidence            3   233455566665 555544

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.00  E-value=1.3  Score=36.21  Aligned_cols=33  Identities=30%  Similarity=0.422  Sum_probs=29.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD  220 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~  220 (373)
                      -.+++|+|.|.|.+|..+++++...|+ +|++++
T Consensus        34 l~g~~v~IQGfGnVG~~~a~~L~e~Ga-kvvavs   66 (255)
T d1bgva1          34 LVGKTVALAGFGNVAWGAAKKLAELGA-KAVTLS   66 (255)
T ss_dssp             STTCEEEECCSSHHHHHHHHHHHHHTC-EEEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEe
Confidence            468899999999999999999999999 787774

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=90.88  E-value=0.28  Score=42.27  Aligned_cols=37  Identities=24%  Similarity=0.269  Sum_probs=31.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR  225 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~  225 (373)
                      +.++|||+|+ |.+|...+..+...|. +|+++.|+..+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~   39 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKG   39 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCC-eEEEEECCcch
Confidence            5689999997 9999999999999999 78888776543

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=90.63  E-value=0.32  Score=40.47  Aligned_cols=36  Identities=22%  Similarity=0.193  Sum_probs=26.9

Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHHHH
Q 017336          192 VAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEE  228 (373)
Q Consensus       192 vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~-~~~~~~~  228 (373)
                      +||+|+ +++|.++++.+...|+ +|+.+.+ ++++.+.
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~   42 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANA   42 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHH
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCCHHHHHH
Confidence            577787 7999999999999999 6776544 4444443

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=90.63  E-value=0.32  Score=35.26  Aligned_cols=89  Identities=18%  Similarity=0.226  Sum_probs=53.5

Q ss_pred             CCCEEEEECCCHH-----------HHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcC
Q 017336          188 RGSSVAVFGLGAV-----------GLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~g~~-----------G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~  256 (373)
                      ..++|||+|+|+.           +.-++..+|..|+ +++.+.++++....-..+ +++++- +.-..+.+..+-+.  
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~-~~iliN~NP~TVstd~d~-aD~lYf-ePlt~e~v~~Ii~~--   80 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGY-RVINVNSNPATIMTDPEM-ADATYI-EPIHWEVVRKIIEK--   80 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTC-EEEEECSCTTCGGGCGGG-SSEEEC-SCCCHHHHHHHHHH--
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCC-eEEEecCchHhhhcChhh-cceeee-ecCCHHHHHHHHHH--
Confidence            4588999998753           3445555567799 899998887764322221 233321 11111122222222  


Q ss_pred             CCccEEEEccCChHhHHHHHHHhhc
Q 017336          257 GGVDRSVECTGNIDNMISAFECVHD  281 (373)
Q Consensus       257 ~~~d~vid~~g~~~~~~~~~~~l~~  281 (373)
                      ++.|.|+-..|++-.++.+.++...
T Consensus        81 E~pd~il~~~GGQtalnla~~L~~~  105 (127)
T d1a9xa3          81 ERPDAVLPTMGGQTALNCALELERQ  105 (127)
T ss_dssp             HCCSEEECSSSHHHHHHHHHHHHHT
T ss_pred             hCcCCeEEEeeeehHhHHHHHHHHc
Confidence            2789999999997777777777654

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.60  E-value=0.59  Score=37.86  Aligned_cols=33  Identities=33%  Similarity=0.473  Sum_probs=28.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHH-HHcCCcEEEEEc
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGA-RIAGASRIIGVD  220 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la-~~~g~~~V~~~~  220 (373)
                      -.+++|+|.|.|.+|..+++++ +..|+ +|++++
T Consensus        29 l~g~~vaIqG~GnVG~~~a~~L~~e~Ga-~vv~vs   62 (234)
T d1b26a1          29 PKKATVAVQGFGNVGQFAALLISQELGS-KVVAVS   62 (234)
T ss_dssp             TTTCEEEEECCSHHHHHHHHHHHHHHCC-EEEEEE
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHhcCC-ceEEee
Confidence            4689999999999999999887 56799 787775

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=90.59  E-value=0.96  Score=34.48  Aligned_cols=96  Identities=20%  Similarity=0.133  Sum_probs=53.5

Q ss_pred             cCCCCCCEEEEECC--CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc-eeecCCCCCccHHHHHHHHcC
Q 017336          184 AKPERGSSVAVFGL--GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       184 ~~~~~~~~vlI~G~--g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~-~vi~~~~~~~~~~~~~~~~~~  256 (373)
                      ..+.++.+||=.++  |.+|.   . |...|+ +|+.++.+++..+.+++    ++.. .+...+.+.  +.. ......
T Consensus        37 ~~~~~g~~vLDl~~G~G~~~i---~-a~~~ga-~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d~--~~~-~~~~~~  108 (171)
T d1ws6a1          37 LRYPRRGRFLDPFAGSGAVGL---E-AASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEV--FLP-EAKAQG  108 (171)
T ss_dssp             HHCTTCCEEEEETCSSCHHHH---H-HHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHH--HHH-HHHHTT
T ss_pred             ccccCCCeEEEeccccchhhh---h-hhhccc-hhhhcccCHHHHhhhhHHHHhhccccceeeeehhc--ccc-cccccC
Confidence            34677888887754  56554   3 334588 78899999998887753    5553 333222111  211 112233


Q ss_pred             CCccEEEEc----cCChHhHHHHHH--HhhcCCcEEEE
Q 017336          257 GGVDRSVEC----TGNIDNMISAFE--CVHDGWGVAVL  288 (373)
Q Consensus       257 ~~~d~vid~----~g~~~~~~~~~~--~l~~~~g~~v~  288 (373)
                      ..||+||--    .+-.+.+.....  .++++ |.+++
T Consensus       109 ~~fD~If~DPPY~~~~~~~l~~l~~~~ll~~~-g~ivi  145 (171)
T d1ws6a1         109 ERFTVAFMAPPYAMDLAALFGELLASGLVEAG-GLYVL  145 (171)
T ss_dssp             CCEEEEEECCCTTSCTTHHHHHHHHHTCEEEE-EEEEE
T ss_pred             CccceeEEccccccCHHHHHHHHHHcCCcCCC-eEEEE
Confidence            389999742    222234443332  46775 76654

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.57  E-value=0.65  Score=33.70  Aligned_cols=72  Identities=11%  Similarity=0.233  Sum_probs=46.2

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336          191 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       191 ~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      +|.|+|+ |-+|.+..+++...+..-+..++.+..           ..         +         ..+|++||++.. 
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~-----------~~---------~---------~~~DVvIDFS~p-   51 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV-----------EE---------L---------DSPDVVIDFSSP-   51 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE-----------EE---------C---------SCCSEEEECSCG-
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH-----------HH---------h---------ccCCEEEEecCH-
Confidence            5889997 999999999999988843333332110           00         0         157999998866 


Q ss_pred             HhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          270 DNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       270 ~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      +.....++..... +.=+.+|.++
T Consensus        52 ~~~~~~l~~~~~~-~~p~ViGTTG   74 (128)
T d1vm6a3          52 EALPKTVDLCKKY-RAGLVLGTTA   74 (128)
T ss_dssp             GGHHHHHHHHHHH-TCEEEECCCS
T ss_pred             HHHHHHHHHHHhc-CCCEEEEcCC
Confidence            4444444444443 5666777765

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.54  E-value=0.11  Score=41.81  Aligned_cols=31  Identities=19%  Similarity=0.396  Sum_probs=28.1

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          192 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       192 vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      |+|+|+|..|+.++..+.+.|. +|+++++++
T Consensus         8 viViGaG~~Gl~~A~~La~~G~-~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGTGITECILSGLLSVDGK-KVLHIDKQD   38 (297)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence            7899999999999999999998 899998865

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=90.52  E-value=0.13  Score=42.42  Aligned_cols=34  Identities=26%  Similarity=0.435  Sum_probs=28.9

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK  224 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~  224 (373)
                      +.|||+|+ +++|.++++.+...|+ +|+.++++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECChH
Confidence            46789987 8999999999999999 8988887643

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=90.50  E-value=0.3  Score=40.12  Aligned_cols=102  Identities=21%  Similarity=0.105  Sum_probs=61.3

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCceeecCCCCCccHHHHHHHHcC
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFVNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~vi~~~~~~~~~~~~~~~~~~  256 (373)
                      .....+.+.++||=+|+|. |..++.++++..--++++++.. +..+.+    .+.+...-+.....+  +    .+..+
T Consensus        73 ~~~~d~~~~~~VLDvGcG~-G~~~~~la~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~rv~~~~~D--~----~~~~~  144 (253)
T d1tw3a2          73 AAAYDWTNVRHVLDVGGGK-GGFAAAIARRAPHVSATVLEMA-GTVDTARSYLKDEGLSDRVDVVEGD--F----FEPLP  144 (253)
T ss_dssp             HHHSCCTTCSEEEEETCTT-SHHHHHHHHHCTTCEEEEEECT-THHHHHHHHHHHTTCTTTEEEEECC--T----TSCCS
T ss_pred             HhhcCCccCCEEEEeCCCC-CHHHHHHHHhcceeEEEEccCH-HHHHHHHHHHHHhhcccchhhcccc--c----hhhcc
Confidence            3445667788999998875 7788889988743388888864 333333    334432111111111  1    01112


Q ss_pred             CCccEEEEccC-----Ch---HhHHHHHHHhhcCCcEEEEEcC
Q 017336          257 GGVDRSVECTG-----NI---DNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       257 ~~~d~vid~~g-----~~---~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      +++|+|+-..-     .+   .++..+.+.|+|+ |++++...
T Consensus       145 ~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPG-G~l~i~e~  186 (253)
T d1tw3a2         145 RKADAIILSFVLLNWPDHDAVRILTRCAEALEPG-GRILIHER  186 (253)
T ss_dssp             SCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             cchhheeeccccccCCchhhHHHHHHHHHhcCCC-cEEEEEec
Confidence            37999885422     11   3477899999997 99988754

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.49  E-value=0.25  Score=37.30  Aligned_cols=36  Identities=31%  Similarity=0.359  Sum_probs=30.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      .-+++|+|+|+|.+|.=++..+.++|++.|+++.+.
T Consensus        43 ~~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          43 SIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             cCCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeC
Confidence            346789999999999999999999999888887654

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=90.34  E-value=0.34  Score=41.43  Aligned_cols=73  Identities=16%  Similarity=0.112  Sum_probs=44.3

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceee-cCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          191 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFV-NTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       191 ~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi-~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      +|||+|+ |-+|...++.+...|...|++++....+...+.+ -.+..+. |.... ..+.+....    ++|+||.+++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~-~~~~~~~~~----~~d~Vih~a~   76 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIH-SEWIEYHVK----KCDVVLPLVA   76 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTC-SHHHHHHHH----HCSEEEECBC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCCh-HHHHHHHHh----CCCccccccc
Confidence            5999988 9999999988877774379998776544333322 1222221 22221 123332222    5899999877


Q ss_pred             C
Q 017336          268 N  268 (373)
Q Consensus       268 ~  268 (373)
                      -
T Consensus        77 ~   77 (342)
T d2blla1          77 I   77 (342)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=90.33  E-value=0.55  Score=39.10  Aligned_cols=97  Identities=16%  Similarity=0.214  Sum_probs=64.9

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHh----cCCce-eecCCCCCccHHHHHHHHcCC
Q 017336          184 AKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHDRPIQEVIAEMTNG  257 (373)
Q Consensus       184 ~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~----lg~~~-vi~~~~~~~~~~~~~~~~~~~  257 (373)
                      .++.++.+||=+|+|. |..+..+++..+. .+|++++.+++..+.+++    .+... .+..+..+      +  ...+
T Consensus        23 ~~~~~~~~ILDiGcG~-G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~------~--~~~~   93 (281)
T d2gh1a1          23 WKITKPVHIVDYGCGY-GYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATE------I--ELND   93 (281)
T ss_dssp             SCCCSCCEEEEETCTT-THHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTT------C--CCSS
T ss_pred             hccCCcCEEEEecCcC-CHHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccccccccc------c--cccC
Confidence            3567788999899874 7888888887642 289999999988877764    34322 11111111      0  0123


Q ss_pred             CccEEEEccC-----Ch-HhHHHHHHHhhcCCcEEEEEc
Q 017336          258 GVDRSVECTG-----NI-DNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       258 ~~d~vid~~g-----~~-~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      .+|+|+....     .+ ..+..+.+.|+|+ |.++...
T Consensus        94 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~lii~~  131 (281)
T d2gh1a1          94 KYDIAICHAFLLHMTTPETMLQKMIHSVKKG-GKIICFE  131 (281)
T ss_dssp             CEEEEEEESCGGGCSSHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             CceEEEEehhhhcCCCHHHHHHHHHHHcCcC-cEEEEEE
Confidence            7999987532     22 4678999999997 9888764

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=90.18  E-value=0.8  Score=38.91  Aligned_cols=99  Identities=14%  Similarity=0.097  Sum_probs=62.3

Q ss_pred             cCCCCCCEEEEECC--CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCC--ce--eecCCCCCccHHHHHHH
Q 017336          184 AKPERGSSVAVFGL--GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV--TD--FVNTSEHDRPIQEVIAE  253 (373)
Q Consensus       184 ~~~~~~~~vlI~G~--g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~--~~--vi~~~~~~~~~~~~~~~  253 (373)
                      ..+.+|++||=+.+  |+.++.    |...|+..|+.++.++...+.+++    -|.  +.  ++.   .+  ..+.++.
T Consensus       140 ~~~~~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~---~d--~~~~l~~  210 (317)
T d2b78a2         140 NGSAAGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVV---MD--VFDYFKY  210 (317)
T ss_dssp             HTTTBTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEE---SC--HHHHHHH
T ss_pred             HHhhCCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEE---cc--HHHHHHH
Confidence            45678999998754  555543    224688789999999988888764    122  21  222   12  4444443


Q ss_pred             Hc--CCCccEEEEccC---------------ChHhHHHHHHHhhcCCcEEEEEcCC
Q 017336          254 MT--NGGVDRSVECTG---------------NIDNMISAFECVHDGWGVAVLVGVP  292 (373)
Q Consensus       254 ~~--~~~~d~vid~~g---------------~~~~~~~~~~~l~~~~g~~v~~g~~  292 (373)
                      ..  ++.||+||-=..               -.+++..+.++|+|+ |.++.+...
T Consensus       211 ~~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pg-G~l~~~scs  265 (317)
T d2b78a2         211 ARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSEN-GLIIASTNA  265 (317)
T ss_dssp             HHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEE-EEEEEEECC
T ss_pred             HHhhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeCC
Confidence            32  237999875211               013667788999997 988876553

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=90.06  E-value=0.44  Score=36.11  Aligned_cols=87  Identities=11%  Similarity=0.101  Sum_probs=55.7

Q ss_pred             EEEEECCCHHHHH-HHHHHHHc-CCcEEEEEcCChhHH-HHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          191 SVAVFGLGAVGLA-AAEGARIA-GASRIIGVDRSSKRF-EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       191 ~vlI~G~g~~G~~-ai~la~~~-g~~~V~~~~~~~~~~-~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      +|.|+|+|.+|.- .+..++.. +++-+.+++++.++. +..++++++. .  +.    + +.+   . ..+|+|+.|+.
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~-~--~~----~-~~l---~-~~~D~V~I~tp   70 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY-A--DS----L-SSL---A-ASCDAVFVHSS   70 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB-C--SS----H-HHH---H-TTCSEEEECSC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc-c--cc----c-hhh---h-hhccccccccc
Confidence            5889999988864 55655544 663344455655544 4456677642 1  11    2 222   1 25899999998


Q ss_pred             ChHhHHHHHHHhhcCCcEEEEEcC
Q 017336          268 NIDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       268 ~~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ...+.+.+..+|..+  .=+++.-
T Consensus        71 ~~~h~~~~~~al~~g--k~V~~EK   92 (164)
T d1tlta1          71 TASHFDVVSTLLNAG--VHVCVDK   92 (164)
T ss_dssp             TTHHHHHHHHHHHTT--CEEEEES
T ss_pred             chhcccccccccccc--ceeeccc
Confidence            878889999999884  4455544

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=89.96  E-value=0.22  Score=40.73  Aligned_cols=34  Identities=35%  Similarity=0.469  Sum_probs=30.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcC
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR  221 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~  221 (373)
                      -.+++|+|.|.|.+|..+++++...|+ +|++++-
T Consensus        29 l~g~~v~IqGfGnVG~~~a~~L~~~Ga-kvv~vsD   62 (242)
T d1v9la1          29 IEGKTVAIQGMGNVGRWTAYWLEKMGA-KVIAVSD   62 (242)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEEC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEeec
Confidence            478999999999999999999999999 8887753

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.83  E-value=0.25  Score=42.75  Aligned_cols=75  Identities=15%  Similarity=0.205  Sum_probs=45.2

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          187 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       187 ~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      .++-+|||+|+ |-+|...+..+...|. .|+++++...... ........+...+-.+  .. .+.+.. .++|.|+.+
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~~~~~~-~~~~~~~~~~~~D~~~--~~-~~~~~~-~~~d~Vih~   86 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEHM-TEDMFCDEFHLVDLRV--ME-NCLKVT-EGVDHVFNL   86 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSSS-CGGGTCSEEEECCTTS--HH-HHHHHH-TTCSEEEEC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCCccch-hhhcccCcEEEeechh--HH-HHHHHh-hcCCeEeec
Confidence            45778999987 9999999999999998 8998865433211 1111111221111111  22 233332 268999997


Q ss_pred             cC
Q 017336          266 TG  267 (373)
Q Consensus       266 ~g  267 (373)
                      .+
T Consensus        87 a~   88 (363)
T d2c5aa1          87 AA   88 (363)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=89.57  E-value=0.14  Score=41.69  Aligned_cols=31  Identities=42%  Similarity=0.582  Sum_probs=27.7

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          192 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       192 vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      |+|+|+|..|++++..+.+.|. +|+++++.+
T Consensus         5 ViIIGaG~aGl~aA~~la~~G~-~V~liEk~~   35 (251)
T d2i0za1           5 VIVIGGGPSGLMAAIGAAEEGA-NVLLLDKGN   35 (251)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            8899999999998888888999 899998765

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=89.50  E-value=0.11  Score=43.24  Aligned_cols=31  Identities=39%  Similarity=0.475  Sum_probs=28.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      +|+|+|+|..|+.++..+.+.|. +|++++.+
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~-~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGT-DAVLLESS   32 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTC-CEEEECSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCC-CEEEEecC
Confidence            48999999999999999999999 79999765

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=89.35  E-value=0.15  Score=41.84  Aligned_cols=33  Identities=27%  Similarity=0.354  Sum_probs=29.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChh
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  224 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~  224 (373)
                      .|+|+|+|+.|++++..|...|. +|++++..++
T Consensus         6 DViIIGaG~aGl~aA~~la~~G~-~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGKK   38 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             cEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCC
Confidence            48999999999999998989998 8999988754

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=89.33  E-value=0.082  Score=41.48  Aligned_cols=35  Identities=23%  Similarity=0.253  Sum_probs=30.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      +++.|+|+|+|+.|+.++..+.++|. +|+++++.+
T Consensus         4 k~~dVvIIGGGpaGl~AA~~~ar~g~-~v~iie~~~   38 (190)
T d1trba1           4 KHSKLLILGSGPAGYTAAVYAARANL-QPVLITGME   38 (190)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHTTTC-CCEEECCSS
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEEeec
Confidence            45689999999999999999999999 788886543

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=89.31  E-value=0.2  Score=42.20  Aligned_cols=36  Identities=28%  Similarity=0.352  Sum_probs=30.7

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCcEEEEEcCChh
Q 017336          188 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSK  224 (373)
Q Consensus       188 ~~~~vlI~G~-g--~~G~~ai~la~~~g~~~V~~~~~~~~  224 (373)
                      +|+++||+|+ |  ++|.+.++.+...|+ +|+.+.+++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga-~Vvi~~~~~~   45 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPA   45 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCchh
Confidence            6789999997 4  799999999999999 7888877654

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=89.30  E-value=0.18  Score=39.99  Aligned_cols=86  Identities=17%  Similarity=0.186  Sum_probs=55.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .+++|.|+|.|.+|..++++++.+|+ +|++.++...+.       ....+...  +  +.+.++     ..|+|.-++.
T Consensus        44 ~~ktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-------~~~~~~~~--~--l~~l~~-----~~D~v~~~~p  106 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPMKG-------DHPDFDYV--S--LEDLFK-----QSDVIDLHVP  106 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSS-------CCTTCEEC--C--HHHHHH-----HCSEEEECCC
T ss_pred             cceeeeeeecccccccccccccccce-eeeccCCccchh-------hhcchhHH--H--HHHHHH-----hcccceeeec
Confidence            46899999999999999999999999 899998753321       00001111  1  322222     2577777654


Q ss_pred             ChH-----hHHHHHHHhhcCCcEEEEEcC
Q 017336          268 NID-----NMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       268 ~~~-----~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..+     +-...++.|+++ ..+|.++-
T Consensus       107 lt~~T~~li~~~~l~~mk~~-a~lIN~aR  134 (199)
T d1dxya1         107 GIEQNTHIINEAAFNLMKPG-AIVINTAR  134 (199)
T ss_dssp             CCGGGTTSBCHHHHHHSCTT-EEEEECSC
T ss_pred             ccccccccccHHHhhccCCc-eEEEeccc
Confidence            321     234677888886 77776654

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=89.11  E-value=0.26  Score=38.41  Aligned_cols=84  Identities=25%  Similarity=0.324  Sum_probs=55.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .+++|.|+|.|.+|...+++++.+|+ +|++.+++...       +.....  .  +  +    .+... ..|+|+.++.
T Consensus        41 ~gk~vgIiG~G~IG~~va~~l~~~g~-~v~~~d~~~~~-------~~~~~~--~--~--l----~ell~-~sDiv~~~~p  101 (181)
T d1qp8a1          41 QGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPKE-------GPWRFT--N--S--L----EEALR-EARAAVCALP  101 (181)
T ss_dssp             TTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCCC-------SSSCCB--S--C--S----HHHHT-TCSEEEECCC
T ss_pred             cCceEEEeccccccccceeeeecccc-ccccccccccc-------cceeee--e--c--h----hhhhh-ccchhhcccc
Confidence            57899999999999999999999999 89999875421       111111  1  1  2    22222 4788888764


Q ss_pred             Ch-H---h-HHHHHHHhhcCCcEEEEEcC
Q 017336          268 NI-D---N-MISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       268 ~~-~---~-~~~~~~~l~~~~g~~v~~g~  291 (373)
                      .. +   . -...++.|+++ ..+|.++.
T Consensus       102 l~~~t~~li~~~~l~~mk~~-ailIN~~R  129 (181)
T d1qp8a1         102 LNKHTRGLVKYQHLALMAED-AVFVNVGR  129 (181)
T ss_dssp             CSTTTTTCBCHHHHTTSCTT-CEEEECSC
T ss_pred             cccccccccccceeeecccc-ceEEeccc
Confidence            32 1   1 24667778886 77776653

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=89.07  E-value=0.14  Score=39.42  Aligned_cols=82  Identities=15%  Similarity=0.118  Sum_probs=51.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336          191 SVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  269 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  269 (373)
                      +|.|+|.|.+|...+..++.. +++-|.++++++++.   ...   .+..+.+.        ... ...+|+|+.|++..
T Consensus         5 rvgiiG~G~ig~~~~~~l~~~~~~elvav~~~~~~~~---~~~---~~~~~~~~--------~~~-~~~~D~Vvi~tp~~   69 (170)
T d1f06a1           5 RVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLD---TKT---PVFDVADV--------DKH-ADDVDVLFLCMGSA   69 (170)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCS---SSS---CEEEGGGG--------GGT-TTTCSEEEECSCTT
T ss_pred             eEEEECChHHHHHHHHHHHhCCCcEEEEEEecccccc---ccc---ccccchhh--------hhh-ccccceEEEeCCCc
Confidence            589999999998887777765 563343444443321   111   12111111        111 12689999999987


Q ss_pred             HhHHHHHHHhhcCCcEEEE
Q 017336          270 DNMISAFECVHDGWGVAVL  288 (373)
Q Consensus       270 ~~~~~~~~~l~~~~g~~v~  288 (373)
                      .+.+.+.++|..+ -.++.
T Consensus        70 ~h~~~a~~aL~aG-~~vv~   87 (170)
T d1f06a1          70 TDIPEQAPKFAQF-ACTVD   87 (170)
T ss_dssp             THHHHHHHHHTTT-SEEEC
T ss_pred             ccHHHHHHHHHCC-CcEEE
Confidence            8899999999995 55553

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=89.02  E-value=0.13  Score=44.91  Aligned_cols=31  Identities=16%  Similarity=0.314  Sum_probs=26.1

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC
Q 017336          191 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDR  221 (373)
Q Consensus       191 ~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~  221 (373)
                      +|||+|+ |-+|...+..+...|...|++++.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~   33 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK   33 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence            6999987 999999999998889866777754

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=88.92  E-value=0.37  Score=34.49  Aligned_cols=89  Identities=12%  Similarity=-0.003  Sum_probs=50.1

Q ss_pred             CCCEEEEECCCHH-----------HHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcC
Q 017336          188 RGSSVAVFGLGAV-----------GLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~G~g~~-----------G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~  256 (373)
                      ..++|||+|+|+.           +.-++.-+|..|+ +++.+.++++....-..+ +++++. +.-..+.+..+-+.  
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~-~~IliN~NPeTVstd~d~-aD~lYf-eplt~e~v~~Ii~~--   77 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGY-ETIMVNCNPETVSTDYDT-SDRLYF-EPVTLEDVLEIVRI--   77 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTC-EEEEECCCTTSSTTSTTS-SSEEEC-CCCSHHHHHHHHHH--
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCC-eEEEEecChhhhhcChhh-cCceEE-ccCCHHHHHHHHHH--
Confidence            3578999998753           3445555667799 888998887764221111 233321 11111122222222  


Q ss_pred             CCccEEEEccCChHhHHHHHHHhhc
Q 017336          257 GGVDRSVECTGNIDNMISAFECVHD  281 (373)
Q Consensus       257 ~~~d~vid~~g~~~~~~~~~~~l~~  281 (373)
                      ++.|.|+-..|++-.++.+.++-+.
T Consensus        78 E~p~~ii~~~GGQtalnla~~L~~~  102 (121)
T d1a9xa4          78 EKPKGVIVQYGGQTPLKLARALEAA  102 (121)
T ss_dssp             HCCSEEECSSSTHHHHTTHHHHHHT
T ss_pred             hCCCEEEeehhhhhHHHHHHHHHHc
Confidence            2678888888886666666655444

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.78  E-value=0.4  Score=37.85  Aligned_cols=69  Identities=16%  Similarity=0.271  Sum_probs=41.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCc-EEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  266 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~-~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~  266 (373)
                      .++|||+|+ |-+|...+..+...|.. +|++..+++..       ....+ .....+  +.+... ......|+|++|+
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-------~~~~~-~~~~~d--~~~~~~-~~~~~~d~vi~~~   70 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------EHPRL-DNPVGP--LAELLP-QLDGSIDTAFCCL   70 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------CCTTE-ECCBSC--HHHHGG-GCCSCCSEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-------hcccc-cccccc--hhhhhh-ccccchheeeeee
Confidence            379999998 99999999988888752 56666554311       00111 111111  433322 2233689999998


Q ss_pred             CC
Q 017336          267 GN  268 (373)
Q Consensus       267 g~  268 (373)
                      |.
T Consensus        71 g~   72 (212)
T d2a35a1          71 GT   72 (212)
T ss_dssp             CC
T ss_pred             ee
Confidence            75

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=88.77  E-value=0.28  Score=35.29  Aligned_cols=35  Identities=23%  Similarity=0.334  Sum_probs=30.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      .+++++|+|+|.+|+-+++.+..+|. +|..+.+++
T Consensus        31 ~~~~vvIiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   65 (122)
T d1xhca2          31 NSGEAIIIGGGFIGLELAGNLAEAGY-HVKLIHRGA   65 (122)
T ss_dssp             HHSEEEEEECSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             cCCcEEEECCcHHHHHHHHHhhcccc-eEEEEeccc
Confidence            45789999999999999999999999 888887654

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=88.64  E-value=0.78  Score=34.98  Aligned_cols=95  Identities=21%  Similarity=0.322  Sum_probs=57.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC--hhHHHHHHhcCC-------ce-------eec------CCCCCccHH
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS--SKRFEEAKKFGV-------TD-------FVN------TSEHDRPIQ  248 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~--~~~~~~~~~lg~-------~~-------vi~------~~~~~~~~~  248 (373)
                      +|.|.|-|-+|.++.+++...+. .|+++.-.  .+....+-++.-       +.       .++      +.+.+    
T Consensus         2 kigINGfGRIGR~~~R~l~~~~i-~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~----   76 (168)
T d2g82a1           2 KVGINGFGRIGRQVFRILHSRGV-EVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKD----   76 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTC-CEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSS----
T ss_pred             EEEEECCcHHHHHHHHHHhcCCC-EEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCC----
Confidence            57899999999999998888888 56666332  233333433211       10       000      01111    


Q ss_pred             HHHHHHcCC--CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          249 EVIAEMTNG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       249 ~~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                        ..+....  ++|+|+||+|.-...+.+...+..+ .+-|++..+.
T Consensus        77 --p~~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~g-akkViiSAP~  120 (168)
T d2g82a1          77 --PKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGG-AKKVIITAPA  120 (168)
T ss_dssp             --GGGCCTGGGTEEEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCC
T ss_pred             --hHHCcccccCCceeEeccccccchHHhhhhhccc-cceeeecccc
Confidence              1122222  7999999999866677888888886 5445554443

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=88.51  E-value=0.19  Score=40.00  Aligned_cols=31  Identities=26%  Similarity=0.350  Sum_probs=27.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      -|+|+|+|+.|+.++..+.++|. +|++++..
T Consensus         5 DvvVIGgGpaGl~aA~~aa~~G~-kV~vie~~   35 (221)
T d1dxla1           5 DVVIIGGGPGGYVAAIKAAQLGF-KTTCIEKR   35 (221)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTC-CEEEEECS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEEec
Confidence            37899999999999999999999 78888764

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=88.47  E-value=0.2  Score=38.57  Aligned_cols=30  Identities=30%  Similarity=0.269  Sum_probs=26.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcC
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDR  221 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~  221 (373)
                      .|+|+|+|+.|+.|+..|.+.|. +|+++++
T Consensus         3 DViIIGgGpaGl~AAi~aar~G~-~v~iie~   32 (184)
T d1fl2a1           3 DVLIVGSGPAGAAAAIYSARKGI-RTGLMGE   32 (184)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTC-CEEEECS
T ss_pred             cEEEECcCHHHHHHHHHHHHcCC-eEEEEEE
Confidence            37899999999999999999999 7888864

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=88.42  E-value=0.44  Score=35.88  Aligned_cols=39  Identities=18%  Similarity=0.204  Sum_probs=32.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhH
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR  225 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~  225 (373)
                      ++..+|.|+|+|.+|..++.++...+...++.++.++++
T Consensus         5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~   43 (154)
T d1pzga1           5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGM   43 (154)
T ss_dssp             SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSH
T ss_pred             cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEecccc
Confidence            456889999999999888888787786689999877654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=88.40  E-value=0.66  Score=38.22  Aligned_cols=34  Identities=24%  Similarity=0.268  Sum_probs=29.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      .++|||+|+ |-+|...+..+...|. .|++++++.
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~-~V~~l~R~~   37 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVRES   37 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEECCC
Confidence            478999998 9999999999998998 799888754

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.29  E-value=0.38  Score=38.02  Aligned_cols=41  Identities=34%  Similarity=0.535  Sum_probs=35.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF  232 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l  232 (373)
                      +|.|+|.|-+|+..+..+...|. .|++++.++++.+.+.+-
T Consensus         2 kI~ViGlG~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~g   42 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQG   42 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT
T ss_pred             EEEEECCCHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhccc
Confidence            47899999999998888888898 899999999998887663

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.17  E-value=0.52  Score=39.09  Aligned_cols=103  Identities=12%  Similarity=0.029  Sum_probs=58.0

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHH----c-CCc-EEEEEcCChhHHHHHHhc-C----Cce-eecCCCCCccHHHH--
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARI----A-GAS-RIIGVDRSSKRFEEAKKF-G----VTD-FVNTSEHDRPIQEV--  250 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~----~-g~~-~V~~~~~~~~~~~~~~~l-g----~~~-vi~~~~~~~~~~~~--  250 (373)
                      ..++.-+||=+|+|. |..+..+++.    . +.. .+++++.++..++.+++. .    ... .++.....  +.+.  
T Consensus        37 ~~~~~~~VLDiGcG~-G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~~  113 (280)
T d1jqea_          37 DTKSEIKILSIGGGA-GEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKET--SSEYQS  113 (280)
T ss_dssp             TTCSEEEEEEETCTT-SHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSC--HHHHHH
T ss_pred             cCCCCCeEEEEcCCC-CHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhh--hhhhcc
Confidence            344555788888753 4444444432    2 221 578999999888877652 1    111 12222221  2211  


Q ss_pred             -HHH-HcCCCccEEEEccC-----C-hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          251 -IAE-MTNGGVDRSVECTG-----N-IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       251 -~~~-~~~~~~d~vid~~g-----~-~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                       ... ...+.||+|+....     . ...+..+.+.|+|+ |.+++.-.
T Consensus       114 ~~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~Lkpg-G~l~i~~~  161 (280)
T d1jqea_         114 RMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTN-AKMLIIVV  161 (280)
T ss_dssp             HHTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             hhcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCC-CEEEEEEe
Confidence             111 12237999987432     2 25788999999997 98876643

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=87.80  E-value=2  Score=36.18  Aligned_cols=109  Identities=20%  Similarity=0.117  Sum_probs=67.8

Q ss_pred             hhccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCcEEEEE--cCChhHHHHHHhcCCceeecCCC---------------
Q 017336          181 LNVAKPERGSSVAVF-GLGAVGLAAAEGARIAGASRIIGV--DRSSKRFEEAKKFGVTDFVNTSE---------------  242 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~-G~g~~G~~ai~la~~~g~~~V~~~--~~~~~~~~~~~~lg~~~vi~~~~---------------  242 (373)
                      .+...++++.+.+|. .+|..|.+.+..++.+|.+-++++  ..++.|++.++.+|++.+.....               
T Consensus        56 ~~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~~  135 (320)
T d1z7wa1          56 EKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILA  135 (320)
T ss_dssp             HHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHH
T ss_pred             HHcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHHH
Confidence            344556666565565 569999999999999999544444  33568888999999875432110               


Q ss_pred             -----------CCc--------cHHHHHHHHcCCCccEEEEccCChHhHH---HHHHHhhcCCcEEEEEc
Q 017336          243 -----------HDR--------PIQEVIAEMTNGGVDRSVECTGNIDNMI---SAFECVHDGWGVAVLVG  290 (373)
Q Consensus       243 -----------~~~--------~~~~~~~~~~~~~~d~vid~~g~~~~~~---~~~~~l~~~~g~~v~~g  290 (373)
                                 .+.        .....+.+...+.+|+++-++|+...+.   ..++...+. -+++.+.
T Consensus       136 ~~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~-~~~igve  204 (320)
T d1z7wa1         136 KTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNAN-VKLYGVE  204 (320)
T ss_dssp             HCTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred             hCCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcc-eeeeccc
Confidence                       000        1222333344447899999998865544   444555554 6666554

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=87.72  E-value=2.5  Score=32.16  Aligned_cols=95  Identities=23%  Similarity=0.361  Sum_probs=55.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHc----CCcEEEEEcC--ChhHHHHHHhcC-------Cce-------eec------CCCCC
Q 017336          191 SVAVFGLGAVGLAAAEGARIA----GASRIIGVDR--SSKRFEEAKKFG-------VTD-------FVN------TSEHD  244 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~----g~~~V~~~~~--~~~~~~~~~~lg-------~~~-------vi~------~~~~~  244 (373)
                      +|.|.|-|-+|.+.+..+...    .. .|+++..  +.+....+-++.       .+.       .++      +...+
T Consensus         3 kigINGfGRIGR~v~R~~~~~~~~~~~-~vvaINd~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~   81 (173)
T d1obfo1           3 RVAINGYGRIGRNILRAHYEGGKSHDI-EIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRN   81 (173)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTSCSSE-EEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSC
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCCCCe-EEEEEcCCCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEecCC
Confidence            578899999999998877543    23 5666642  334444443321       110       111      01111


Q ss_pred             ccHHHHHHHHcCC--CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          245 RPIQEVIAEMTNG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       245 ~~~~~~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                            ..+....  ++|+|+||+|.-...+.+...|..+ .+-|++..+.
T Consensus        82 ------p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~G-akkViiSAP~  125 (173)
T d1obfo1          82 ------PAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGG-AKKVIISAPG  125 (173)
T ss_dssp             ------GGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHT-CSEEEESSCC
T ss_pred             ------HHHCcccccccceEEEecccccCHHHHHHHhccC-CcceEEecCC
Confidence                  1122222  8999999999766677888888887 5555555443

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=87.71  E-value=0.28  Score=39.48  Aligned_cols=93  Identities=15%  Similarity=0.060  Sum_probs=56.8

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce--eecCCCCCccHHHHHHHHcCCCccEE
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRS  262 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~--vi~~~~~~~~~~~~~~~~~~~~~d~v  262 (373)
                      ..-++++||=+|+|. |..+..+++ .|. +|++++.+++..+.+++...+.  ++..+..+      +  ...+.||+|
T Consensus        17 ~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~------~--~~~~~fD~I   85 (225)
T d2p7ia1          17 PFFRPGNLLELGSFK-GDFTSRLQE-HFN-DITCVEASEEAISHAQGRLKDGITYIHSRFED------A--QLPRRYDNI   85 (225)
T ss_dssp             GGCCSSCEEEESCTT-SHHHHHHTT-TCS-CEEEEESCHHHHHHHHHHSCSCEEEEESCGGG------C--CCSSCEEEE
T ss_pred             hhCCCCcEEEEeCCC-cHHHHHHHH-cCC-eEEEEeCcHHHhhhhhcccccccccccccccc------c--ccccccccc
Confidence            334567899899865 666655654 476 7999999999999987643322  12111111      0  112379999


Q ss_pred             EEcc-----CCh-HhHHHHH-HHhhcCCcEEEEE
Q 017336          263 VECT-----GNI-DNMISAF-ECVHDGWGVAVLV  289 (373)
Q Consensus       263 id~~-----g~~-~~~~~~~-~~l~~~~g~~v~~  289 (373)
                      +..-     ..+ ..+.... ++|+++ |.++..
T Consensus        86 ~~~~vleh~~d~~~~l~~i~~~~Lk~g-G~l~i~  118 (225)
T d2p7ia1          86 VLTHVLEHIDDPVALLKRINDDWLAEG-GRLFLV  118 (225)
T ss_dssp             EEESCGGGCSSHHHHHHHHHHTTEEEE-EEEEEE
T ss_pred             cccceeEecCCHHHHHHHHHHHhcCCC-ceEEEE
Confidence            8632     122 2345555 578996 888764

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.55  E-value=0.7  Score=39.42  Aligned_cols=30  Identities=27%  Similarity=0.199  Sum_probs=26.8

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEc
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVD  220 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~  220 (373)
                      ++|||+|+ |-+|...+..+...|. .|++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~-~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY-LPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC-CEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC-EEEEEE
Confidence            68999987 9999999999988998 788875

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=87.52  E-value=0.25  Score=41.82  Aligned_cols=33  Identities=27%  Similarity=0.304  Sum_probs=28.9

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      -.|+|+|||..|++++..++..|. .|++++..+
T Consensus         8 ~dV~IIGAG~sGl~~a~~L~~~G~-~v~i~Ek~~   40 (298)
T d1w4xa1           8 VDVLVVGAGFSGLYALYRLRELGR-SVHVIETAG   40 (298)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CCEEEECccHHHHHHHHHHHhCCC-CEEEEEcCC
Confidence            358999999999999999999999 788897754

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=87.31  E-value=0.26  Score=40.65  Aligned_cols=32  Identities=19%  Similarity=0.135  Sum_probs=27.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      .|+|+|+|.+|+.++..+.+.|. +|+++++.+
T Consensus         6 DvvIIGaGi~Gls~A~~La~~G~-~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGGGIIGSAIAYYLAKENK-NTALFESGT   37 (276)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            48999999999998888888898 899998753

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=87.31  E-value=0.61  Score=33.82  Aligned_cols=62  Identities=21%  Similarity=0.160  Sum_probs=48.5

Q ss_pred             hhhccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336          180 TLNVAKPERGSSVAVF-GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  241 (373)
Q Consensus       180 l~~~~~~~~~~~vlI~-G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~  241 (373)
                      +++.+++..-+.+++. ..-..-.++.++++.+|..++++...+++..+.++++|++.++++.
T Consensus        57 ~l~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~p~  119 (132)
T d1lssa_          57 TLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSPE  119 (132)
T ss_dssp             HHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEECHH
T ss_pred             hhhhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEECHH
Confidence            3456777776666654 3346677888999999988899888889999999999999988653

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=87.26  E-value=0.23  Score=41.95  Aligned_cols=32  Identities=13%  Similarity=0.345  Sum_probs=28.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      .|+|+|||..|+.++..+...|. +|.+++.++
T Consensus         3 dv~IIGaG~sGl~~A~~L~~~g~-~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGSGLFGAVCANELKKLNK-KVLVIEKRN   34 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGTC-CEEEECSSS
T ss_pred             cEEEECCcHHHHHHHHHHHhCCC-cEEEEECCC
Confidence            48999999999999999988898 899997754

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=87.19  E-value=0.24  Score=39.34  Aligned_cols=30  Identities=20%  Similarity=0.313  Sum_probs=27.2

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          192 VAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       192 vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      |+|+|+|+.|+.++..|.++|. +|++++.+
T Consensus         5 vvVIG~G~aG~~aA~~a~~~G~-kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGGGSGGIASINRAAMYGQ-KCALIEAK   34 (217)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            7889999999999999999999 79988764

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.02  E-value=0.23  Score=42.40  Aligned_cols=31  Identities=29%  Similarity=0.398  Sum_probs=27.6

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          192 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       192 vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      |+|+|+|..|+.++..+++.|. +|++++.++
T Consensus         2 ViVIGaG~aGL~aA~~L~~~G~-~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGGGISGMAAAKLLHDSGL-NVVVLEARD   32 (383)
T ss_dssp             EEEECCBHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            7899999999999999999999 899997643

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=86.89  E-value=0.31  Score=41.70  Aligned_cols=34  Identities=24%  Similarity=0.404  Sum_probs=26.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCCh
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSS  223 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~  223 (373)
                      ++|+|+|||..|++++..+++.|. ..|++.++++
T Consensus         5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            689999999999988866655542 3899998764

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=86.80  E-value=0.29  Score=38.81  Aligned_cols=30  Identities=30%  Similarity=0.380  Sum_probs=27.0

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          192 VAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       192 vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      |+|+|+|+.|+.++..|.+.|. +|+++++.
T Consensus         6 viVIG~GpaGl~aA~~aar~G~-kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKG   35 (223)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence            7888999999999999999999 78888764

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=86.72  E-value=3.6  Score=34.01  Aligned_cols=100  Identities=18%  Similarity=0.148  Sum_probs=64.3

Q ss_pred             hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEE--cCChhHHHHHHhcCCceeecCC------------------
Q 017336          182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGV--DRSSKRFEEAKKFGVTDFVNTS------------------  241 (373)
Q Consensus       182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~--~~~~~~~~~~~~lg~~~vi~~~------------------  241 (373)
                      +...++++.+|+..++|..|.+++..++.+|.+-++++  ..++.+...++.+|++.+....                  
T Consensus        54 ~~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~~~~~~~~~~~~~~~~~~~~~~~  133 (302)
T d1fcja_          54 KRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASD  133 (302)
T ss_dssp             HHTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHTS
T ss_pred             HcCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccceEEeccccccchhhhHHHHHHhhh
Confidence            44566777776666789999999999999998644444  3356788888888886542110                  


Q ss_pred             --------CC-Cc--------cHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhc
Q 017336          242 --------EH-DR--------PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD  281 (373)
Q Consensus       242 --------~~-~~--------~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~  281 (373)
                              .. +.        .....+.+..++.+|+++-++|+...+.-....++.
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~ti~~Ei~e~~~~~~d~vv~~vG~GG~~~Gi~~~lk~  190 (302)
T d1fcja_         134 PQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKG  190 (302)
T ss_dssp             TTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHT
T ss_pred             ccceeccccccccchhHHHHhHHHHHHHHhcCCCCCEEEEcCCCccccccceeeeee
Confidence                    00 00        122234444455789999999987666655555543

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.59  E-value=0.52  Score=40.20  Aligned_cols=93  Identities=18%  Similarity=0.194  Sum_probs=61.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHH-HcCCcEEEEEcCChhHHHHH----HhcCCceeecCCCCCccHHHHHHHHcCCCccE
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGAR-IAGASRIIGVDRSSKRFEEA----KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDR  261 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~-~~g~~~V~~~~~~~~~~~~~----~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~  261 (373)
                      +..+++.|+|+|..+..-++.+. .+..++|.+.++++++.+..    +..+.....+.       .+.+     .+.|+
T Consensus       123 ~~~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~-------~~a~-----~~aDi  190 (320)
T d1omoa_         123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQP-------AEEA-----SRCDV  190 (320)
T ss_dssp             TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECC-------HHHH-----TSSSE
T ss_pred             CCccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccch-------hhhh-----ccccE
Confidence            45578899999988887666554 56788999999998876544    33444333221       1111     26899


Q ss_pred             EEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          262 SVECTGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       262 vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      |+-|+.+..-+ .-.+.++++ -++..+|...
T Consensus       191 V~taT~s~~P~-~~~~~l~~G-~hv~~iGs~~  220 (320)
T d1omoa_         191 LVTTTPSRKPV-VKAEWVEEG-THINAIGADG  220 (320)
T ss_dssp             EEECCCCSSCC-BCGGGCCTT-CEEEECSCCS
T ss_pred             EEEeccCcccc-cchhhcCCC-CeEeecCCcc
Confidence            99998764321 112468896 8888888754

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=86.55  E-value=0.62  Score=36.53  Aligned_cols=90  Identities=21%  Similarity=0.240  Sum_probs=58.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      +.++.+||=+|+|. |..+..+     . ++++++.+++..+.+++-+...+.. +..+  +     ....+.||+|+..
T Consensus        34 ~~~~~~vLDiGcG~-G~~~~~~-----~-~~~giD~s~~~~~~a~~~~~~~~~~-d~~~--l-----~~~~~~fD~I~~~   98 (208)
T d1vlma_          34 LLPEGRGVEIGVGT-GRFAVPL-----K-IKIGVEPSERMAEIARKRGVFVLKG-TAEN--L-----PLKDESFDFALMV   98 (208)
T ss_dssp             HCCSSCEEEETCTT-STTHHHH-----T-CCEEEESCHHHHHHHHHTTCEEEEC-BTTB--C-----CSCTTCEEEEEEE
T ss_pred             hCCCCeEEEECCCC-ccccccc-----c-eEEEEeCChhhcccccccccccccc-cccc--c-----ccccccccccccc
Confidence            34567899899863 4444333     2 5789999999999999877654322 1111  0     0112379999875


Q ss_pred             cC-----Ch-HhHHHHHHHhhcCCcEEEEEcC
Q 017336          266 TG-----NI-DNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       266 ~g-----~~-~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..     .+ ..+..+.+.|+++ |.+++...
T Consensus        99 ~~l~h~~d~~~~l~~~~~~L~pg-G~l~i~~~  129 (208)
T d1vlma_          99 TTICFVDDPERALKEAYRILKKG-GYLIVGIV  129 (208)
T ss_dssp             SCGGGSSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cccccccccccchhhhhhcCCCC-ceEEEEec
Confidence            32     22 4678999999997 98887644

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.43  E-value=0.3  Score=39.10  Aligned_cols=32  Identities=28%  Similarity=0.355  Sum_probs=27.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      -|+|+|+|+.|+.++..|.++|. +|++++..+
T Consensus         7 DviVIG~GpAGl~aA~~aa~~G~-kV~lie~~~   38 (233)
T d1v59a1           7 DVVIIGGGPAGYVAAIKAAQLGF-NTACVEKRG   38 (233)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence            37889999999999999999999 788887643

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=86.29  E-value=0.31  Score=38.86  Aligned_cols=31  Identities=26%  Similarity=0.286  Sum_probs=28.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      .++|+|+|+.|+.++..|.++|. +|++++..
T Consensus         7 DlvVIG~GpaGl~aA~~aa~~G~-~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGGGPGGYVAAIRAGQLGI-PTVLVEGQ   37 (220)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Confidence            47899999999999999999999 89999764

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=86.25  E-value=1.3  Score=32.74  Aligned_cols=38  Identities=24%  Similarity=0.194  Sum_probs=30.3

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCC-cEEEEEcCChhHHH
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAGA-SRIIGVDRSSKRFE  227 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~  227 (373)
                      .+|.|+|| |.+|..++.++...+. +.++.++.++.+.+
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~   40 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV   40 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh
Confidence            36899997 9999999888887774 68888988765533

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=86.12  E-value=0.25  Score=42.27  Aligned_cols=32  Identities=28%  Similarity=0.389  Sum_probs=25.7

Q ss_pred             EEEEECCCHHHHHHHHHHH-----HcCCcEEEEEcCCh
Q 017336          191 SVAVFGLGAVGLAAAEGAR-----IAGASRIIGVDRSS  223 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~-----~~g~~~V~~~~~~~  223 (373)
                      -|+|+|+|.+|++++.++.     +.|. +|+++++.+
T Consensus         9 DV~IvGaG~aGl~lA~~La~~~~~~~G~-~v~vlEr~~   45 (360)
T d1pn0a1           9 DVLIVGAGPAGLMAARVLSEYVRQKPDL-KVRIIDKRS   45 (360)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHHHHSTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHhcccccCCC-cEEEEcCCC
Confidence            3899999999999877773     5688 799997654

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.10  E-value=0.59  Score=41.55  Aligned_cols=33  Identities=24%  Similarity=0.387  Sum_probs=29.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      .+|||+|+|++|.-++..+-..|.+.+..++.+
T Consensus        38 ~kVlvvG~GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          38 CKVLVIGAGGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             CCEEEECSSTTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             CeEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence            679999999999999999999999889988764

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=86.00  E-value=0.32  Score=40.79  Aligned_cols=32  Identities=25%  Similarity=0.398  Sum_probs=26.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      .|+|+|+|.+|++++..+.+.|.++|++++++
T Consensus         3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            59999999999987777777786569898765

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.88  E-value=0.24  Score=39.67  Aligned_cols=100  Identities=16%  Similarity=0.141  Sum_probs=56.7

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHH----hcCCceeecCCCCCccHHHHHHH---HcC
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAE---MTN  256 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~----~lg~~~vi~~~~~~~~~~~~~~~---~~~  256 (373)
                      +..+.++||=+|.+. |..++.+|+.+.. .+|++++.+++..+.++    ..|...-+.....+  ..+.+.+   ...
T Consensus        53 ~~~kpk~ILEiGt~~-G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd--~~e~l~~l~~~~~  129 (214)
T d2cl5a1          53 REYSPSLVLELGAYC-GYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGA--SQDLIPQLKKKYD  129 (214)
T ss_dssp             HHHCCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESC--HHHHGGGHHHHSC
T ss_pred             HhhCCCEEEEEccCc-hhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeecc--ccccccchhhccc
Confidence            344557899998743 5566677776532 28999999988777664    35653322222222  3333332   222


Q ss_pred             -CCccEEEEccCChH-----hHHHHHHHhhcCCcEEEE
Q 017336          257 -GGVDRSVECTGNID-----NMISAFECVHDGWGVAVL  288 (373)
Q Consensus       257 -~~~d~vid~~g~~~-----~~~~~~~~l~~~~g~~v~  288 (373)
                       +.+|.||--.....     .+...++.|+++ |.++.
T Consensus       130 ~~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpG-GvIv~  166 (214)
T d2cl5a1         130 VDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKG-TVLLA  166 (214)
T ss_dssp             CCCEEEEEECSCGGGHHHHHHHHHHTTCEEEE-EEEEE
T ss_pred             ccccceeeecccccccccHHHHHHHhCccCCC-cEEEE
Confidence             26898775433222     133455668886 76543

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=85.86  E-value=0.35  Score=38.77  Aligned_cols=31  Identities=35%  Similarity=0.396  Sum_probs=27.6

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          192 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       192 vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      |+|+|+|+.|+.++..|.+.|. +|++++..+
T Consensus         9 viIIG~GPaGlsaA~~aa~~G~-~V~viE~~~   39 (229)
T d1ojta1           9 VVVLGGGPGGYSAAFAAADEGL-KVAIVERYK   39 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence            7888999999999999999999 899997643

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=85.65  E-value=0.67  Score=36.15  Aligned_cols=39  Identities=23%  Similarity=0.243  Sum_probs=32.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  231 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~  231 (373)
                      +|.|+|.|-+|+..+.++ +.|. .|++++.++++.+.+++
T Consensus         2 kI~ViGlG~vGl~~a~~~-a~g~-~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           2 KIAVAGSGYVGLSLGVLL-SLQN-EVTIVDILPSKVDKINN   40 (196)
T ss_dssp             EEEEECCSHHHHHHHHHH-TTTS-EEEEECSCHHHHHHHHT
T ss_pred             EEEEECCChhHHHHHHHH-HCCC-cEEEEECCHHHHHHHhh
Confidence            578899999999876555 5688 89999999999888765

>d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Homoserine dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.63  E-value=3.7  Score=30.91  Aligned_cols=91  Identities=15%  Similarity=0.085  Sum_probs=51.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcC--Cc-EEEEEcCChh---------------HHHHHHhcCCceeecCCCCCccHHHHHH
Q 017336          191 SVAVFGLGAVGLAAAEGARIAG--AS-RIIGVDRSSK---------------RFEEAKKFGVTDFVNTSEHDRPIQEVIA  252 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g--~~-~V~~~~~~~~---------------~~~~~~~lg~~~vi~~~~~~~~~~~~~~  252 (373)
                      +|.|+|.|.+|...++++....  .+ +++++..+..               ..+.......      ....  ......
T Consensus         6 ~I~l~G~G~VG~~l~~~l~~~~~~l~~~v~~i~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~   77 (168)
T d1ebfa1           6 NVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTT------KTLP--LDDLIA   77 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHHTCCC------BCCC--HHHHHH
T ss_pred             EEEEEeCCHHHHHHHHHHHHhHHHhhhheEEEEEeeeeeecccccchHhhhhhhhhhhhccc------cccc--HHHHHH
Confidence            4688899999999988776543  21 5555533211               1111111111      0111  111121


Q ss_pred             HHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEc
Q 017336          253 EMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       253 ~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      ..... ..|+++||.++.+......++|..+ -.+|..+
T Consensus        78 ~~~~~~~~~vivd~t~~~~~~~~~~~aL~~G-~hVVTAN  115 (168)
T d1ebfa1          78 HLKTSPKPVILVDNTSSAYIAGFYTKFVENG-ISIATPN  115 (168)
T ss_dssp             HHTTCSSCEEEEECSCCHHHHTTHHHHHHTT-CEEECCC
T ss_pred             HhccCCCceEEEEecCChHHHHHHHHHHHcC-CeEEecC
Confidence            22222 6799999999988777778888886 6666543

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.55  E-value=0.31  Score=38.01  Aligned_cols=32  Identities=19%  Similarity=0.170  Sum_probs=27.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR  221 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~  221 (373)
                      ..+|+|+|+|+.|+.++..|.+.|. ++++++.
T Consensus         5 ~~~VvIIGgGpaGl~aA~~~ar~g~-~v~vie~   36 (192)
T d1vdca1           5 NTRLCIVGSGPAAHTAAIYAARAEL-KPLLFEG   36 (192)
T ss_dssp             EEEEEEECCSHHHHHHHHHHHHTTC-CCEEECC
T ss_pred             cceEEEECCCHHHHHHHHHHHHcCC-cEEEEEe
Confidence            3679999999999999999999999 7888864

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=85.34  E-value=0.83  Score=34.09  Aligned_cols=38  Identities=13%  Similarity=0.124  Sum_probs=31.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhH
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR  225 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~  225 (373)
                      |..+|.|+|+|.+|...+.++...+...++.++.++++
T Consensus         2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~   39 (150)
T d1t2da1           2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNM   39 (150)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCc
Confidence            45689999999999988888888888889999887654

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=85.25  E-value=0.38  Score=38.16  Aligned_cols=30  Identities=27%  Similarity=0.335  Sum_probs=26.8

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          192 VAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       192 vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      |+|+|+|+.|+.|+..|.+.|. +|++++..
T Consensus         6 viIIGgGpAGl~aA~~aar~G~-~V~viE~~   35 (229)
T d3lada1           6 VIVIGAGPGGYVAAIKSAQLGL-KTALIEKY   35 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTC-CEEEEECC
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-eEEEEecc
Confidence            7888999999999999999999 78888753

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=84.93  E-value=0.4  Score=40.33  Aligned_cols=31  Identities=35%  Similarity=0.581  Sum_probs=27.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      -|+|+|+|..|+.++.-|...|+ +|++++..
T Consensus        18 DVlVIG~G~aGl~aA~~la~~G~-~V~lvEK~   48 (308)
T d1y0pa2          18 DVVVVGSGGAGFSAAISATDSGA-KVILIEKE   48 (308)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEecC
Confidence            48999999999999999999999 79999764

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=84.92  E-value=1.4  Score=32.64  Aligned_cols=70  Identities=17%  Similarity=0.158  Sum_probs=43.4

Q ss_pred             CCCEEEEECC--CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-eecCCCCCccHHHHHHHHcCCCcc
Q 017336          188 RGSSVAVFGL--GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHDRPIQEVIAEMTNGGVD  260 (373)
Q Consensus       188 ~~~~vlI~G~--g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~-vi~~~~~~~~~~~~~~~~~~~~~d  260 (373)
                      .|++||=+++  |.+|+.+    ...|+.+|+.++.+.+..+.+++    ++... +..... +  ..+.+. ...+.||
T Consensus        14 ~g~~vlDl~~GtG~~~iea----~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~-D--~~~~l~-~~~~~fD   85 (152)
T d2esra1          14 NGGRVLDLFAGSGGLAIEA----VSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKM-E--AERAID-CLTGRFD   85 (152)
T ss_dssp             CSCEEEEETCTTCHHHHHH----HHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECS-C--HHHHHH-HBCSCEE
T ss_pred             CCCeEEEcCCccCHHHHHH----HHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcc-c--cccccc-ccccccc
Confidence            5788877754  6666643    34688899999999887766654    56533 211122 2  444443 3344899


Q ss_pred             EEEEc
Q 017336          261 RSVEC  265 (373)
Q Consensus       261 ~vid~  265 (373)
                      +||--
T Consensus        86 iIf~D   90 (152)
T d2esra1          86 LVFLD   90 (152)
T ss_dssp             EEEEC
T ss_pred             eeEec
Confidence            98863

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=84.71  E-value=1.7  Score=34.97  Aligned_cols=95  Identities=9%  Similarity=-0.005  Sum_probs=56.9

Q ss_pred             CEEEEECCCH----HHHHHHHHHHHc--CCcEEE-EEcCChhHHH-HHHhcCCceeecCCCCCccHHHHHHHHcCCCccE
Q 017336          190 SSVAVFGLGA----VGLAAAEGARIA--GASRII-GVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDR  261 (373)
Q Consensus       190 ~~vlI~G~g~----~G~~ai~la~~~--g~~~V~-~~~~~~~~~~-~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~  261 (373)
                      =+|.|+|+|.    ++..-+...+..  ++ +++ +++++.++.+ .+++++....-.+++    +.+.+.   ...+|+
T Consensus        17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~-~ivav~d~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~---~~~iD~   88 (237)
T d2nvwa1          17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQF-QIVALYNPTLKSSLQTIEQLQLKHATGFDS----LESFAQ---YKDIDM   88 (237)
T ss_dssp             EEEEEECCCSTTSHHHHTHHHHHHHTTTTE-EEEEEECSCHHHHHHHHHHTTCTTCEEESC----HHHHHH---CTTCSE
T ss_pred             eEEEEEecCccccHHHHHHHHHHHhcCCCe-EEEEEEcCCHHHHHHHHHhcccccceeecc----hhhccc---ccccce
Confidence            4688999865    344444444443  46 555 4566665544 456777654322222    333222   237999


Q ss_pred             EEEccCChHhHHHHHHHhhcC----CcEEEEEcCC
Q 017336          262 SVECTGNIDNMISAFECVHDG----WGVAVLVGVP  292 (373)
Q Consensus       262 vid~~g~~~~~~~~~~~l~~~----~g~~v~~g~~  292 (373)
                      |+.|+....+.+.+..+|..+    .++-+++.-+
T Consensus        89 V~i~tp~~~h~~~~~~al~aG~~~~~~k~V~~EKP  123 (237)
T d2nvwa1          89 IVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWA  123 (237)
T ss_dssp             EEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESS
T ss_pred             eeccCCCcchhhHHHHHHHhcccccCCceEEEecc
Confidence            999999878888888888763    0245666544

>d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=84.69  E-value=0.78  Score=31.55  Aligned_cols=24  Identities=38%  Similarity=0.522  Sum_probs=19.1

Q ss_pred             ceEEEEEeCCCCC----------CCCCCCEEeec
Q 017336           65 AAGVVESVGEGVS----------DLEVGDHVLPV   88 (373)
Q Consensus        65 ~~G~V~~vG~~v~----------~~~~Gd~V~~~   88 (373)
                      ..|+|+++|++..          .+++||+|+..
T Consensus        38 ~~G~VvavG~g~~~~~~~~~~~~~vk~GD~Vl~~   71 (99)
T d1p3ha_          38 QEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYS   71 (99)
T ss_dssp             EEEEEEEECCCEECSSSSCEECCSCCTTCEEEEE
T ss_pred             eEEEEEEECCceEcCCCCEecCCeeecCCEEEEc
Confidence            3699999998742          37899999854

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=84.60  E-value=0.34  Score=37.13  Aligned_cols=32  Identities=31%  Similarity=0.420  Sum_probs=26.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCc-EEEEE
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGV  219 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~-~V~~~  219 (373)
                      .+++|+|+|+|.+|.-++..++++|.+ .|+..
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v~v~~~   34 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLV   34 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCCceEEEEe
Confidence            468999999999999999999999974 34444

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=84.36  E-value=2.5  Score=32.04  Aligned_cols=95  Identities=21%  Similarity=0.307  Sum_probs=58.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcC---ChhHHHHHHhcC-------Cce-------eec------CCCCCccH
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDR---SSKRFEEAKKFG-------VTD-------FVN------TSEHDRPI  247 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~---~~~~~~~~~~lg-------~~~-------vi~------~~~~~~~~  247 (373)
                      +|.|.|-|-+|++++..+...+. .++++.-   +.+....+-++-       .+.       .++      ....+   
T Consensus         2 kIgINGfGRIGR~~~R~~~~~~~-~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~---   77 (169)
T d1dssg1           2 KIGINGFGRIGRLVLRAALEMGA-QVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMK---   77 (169)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTC-CEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSS---
T ss_pred             eEEEECCcHHHHHHHHHHHhCCC-cEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCC---
Confidence            57899999999999999988888 5666632   234555554321       110       111      00011   


Q ss_pred             HHHHHHHcCC--CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          248 QEVIAEMTNG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       248 ~~~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                         ..+....  ++|+|+||+|.-...+.+...+..+ .+-|++..+.
T Consensus        78 ---p~~i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~g-akkViisaP~  121 (169)
T d1dssg1          78 ---PENIPWSKAGAEYIVESTGVFTTIEKASAHFKGG-AKKVIISAPS  121 (169)
T ss_dssp             ---GGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTT-CSEEEESSCC
T ss_pred             ---hHHCCccccCCCEEEecCceEcCHHHHHHHHhcC-CceEeecCCc
Confidence               1111111  7999999999866777888888886 5555555544

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.32  E-value=0.46  Score=37.64  Aligned_cols=30  Identities=40%  Similarity=0.412  Sum_probs=26.9

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          192 VAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       192 vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      ++|+|+|+.|+.++..|.++|. +|++++..
T Consensus         6 viIIG~GpaG~~aA~~aar~G~-kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGGGSGGLASARRAAELGA-RAAVVESH   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            7888999999999999999999 78888754

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=84.27  E-value=0.45  Score=39.31  Aligned_cols=30  Identities=33%  Similarity=0.441  Sum_probs=26.6

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          192 VAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       192 vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      |+|+|+|.+|+.++..+.+.|. +|+++++.
T Consensus         6 vvIIGaGi~Gls~A~~La~~G~-~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGAGSMGMAAGYQLAKQGV-KTLLVDAF   35 (281)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEeCC
Confidence            8899999999998888888998 89999764

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=84.10  E-value=2.9  Score=34.53  Aligned_cols=98  Identities=16%  Similarity=0.258  Sum_probs=57.7

Q ss_pred             cCCCCCCEEEEEC-C-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCceee-cCCCCCccHHHHHHHHcC
Q 017336          184 AKPERGSSVAVFG-L-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFV-NTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       184 ~~~~~~~~vlI~G-~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~vi-~~~~~~~~~~~~~~~~~~  256 (373)
                      ...+++++||=.- | |+=..   +++..+.-..|++.+.+..|.+.+    +.+|...++ ...+..  .   ......
T Consensus        98 L~~~~g~~vLD~CAaPGgKt~---~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~~--~---~~~~~~  169 (284)
T d1sqga2          98 LAPQNGEHILDLCAAPGGKTT---HILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY--P---SQWCGE  169 (284)
T ss_dssp             HCCCTTCEEEEESCTTCHHHH---HHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTC--T---HHHHTT
T ss_pred             cCccccceeEeccCccccchh---hhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccccc--c---chhccc
Confidence            4678899998773 3 54333   333333324899999999987766    457876432 222221  1   112223


Q ss_pred             CCccEEEE---ccCCh-------------------------HhHHHHHHHhhcCCcEEEEEc
Q 017336          257 GGVDRSVE---CTGNI-------------------------DNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       257 ~~~d~vid---~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      +.||.|+-   |+|..                         ..+..+++.++++ |++|..-
T Consensus       170 ~~fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~g-G~lvYsT  230 (284)
T d1sqga2         170 QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG-GTLVYAT  230 (284)
T ss_dssp             CCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEE-EEEEEEE
T ss_pred             ccccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCC-ceEEEee
Confidence            47888665   55542                         3566777778886 7776543

>d2ax3a2 c.104.1.1 (A:1-211) Hypothetical protein TM0922, N-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: YjeF N-terminal domain-like
superfamily: YjeF N-terminal domain-like
family: YjeF N-terminal domain-like
domain: Hypothetical protein TM0922, N-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=84.09  E-value=3.9  Score=32.11  Aligned_cols=94  Identities=22%  Similarity=0.167  Sum_probs=53.7

Q ss_pred             CCCEEEEE-CC---CHHHHHHHHHHHHcCCcEEEEEcCChh-------HHHHHHhcCCceeecCCCCCccHHHHHHHHcC
Q 017336          188 RGSSVAVF-GL---GAVGLAAAEGARIAGASRIIGVDRSSK-------RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       188 ~~~~vlI~-G~---g~~G~~ai~la~~~g~~~V~~~~~~~~-------~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~  256 (373)
                      ..++|+|+ |.   |+=|++++..++..|+ +|.++-..++       ..+..++++...+ ......          ..
T Consensus        39 ~~~~vlvl~G~GNNGGDGl~~Ar~L~~~g~-~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----------~~  106 (211)
T d2ax3a2          39 SDYRFLVLCGGGNNGGDGFVVARNLLGVVK-DVLVVFLGKKKTPDCEYNYGLYKKFGGKVV-EQFEPS----------IL  106 (211)
T ss_dssp             TTCEEEEEECSSHHHHHHHHHHHHHTTTSS-EEEEEECCSSCCHHHHHHHHHHHHTTCCEE-SCCCGG----------GG
T ss_pred             cCCcEEEEECCCCCchhHHHHHHHHHhcCC-eeEEEecCccCCcHHHHHHHHHHHcCCccc-cccccc----------cc
Confidence            35567665 64   4667788888888898 6665533221       2233344555432 211110          01


Q ss_pred             CCccEEEEccCCh-------HhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          257 GGVDRSVECTGNI-------DNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       257 ~~~d~vid~~g~~-------~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                      ..+|+++|+.-+.       ..+...++.++.....++.+..++
T Consensus       107 ~~~dlIIDal~G~Gl~~~l~~~~~~~i~~iN~~~~~vlsiDiPS  150 (211)
T d2ax3a2         107 NEFDVVVDAIFGTGLRGEITGEYAEIINLVNKSGKVVVSVDVPS  150 (211)
T ss_dssp             GGCSEEEEESCCTTCCSCCCHHHHHHHHHHHHSCCEEEEESSCT
T ss_pred             cCceEEEEecccCCccccchHHHHHHHHHHHhhccceeeeccCc
Confidence            2689999985321       456677788887635566776554

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=83.78  E-value=1.6  Score=35.59  Aligned_cols=101  Identities=19%  Similarity=0.087  Sum_probs=61.0

Q ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHH----HhcCCceeecCCCCCccHHHHHHHHc
Q 017336          181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEA----KKFGVTDFVNTSEHDRPIQEVIAEMT  255 (373)
Q Consensus       181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~~----~~lg~~~vi~~~~~~~~~~~~~~~~~  255 (373)
                      .+...+...++||=+|+|. |..+..++++. +. ++++++. ++-.+.+    ++.|....+.....+  +   . +..
T Consensus        74 ~~~~d~~~~~~vlDvG~G~-G~~~~~l~~~~P~~-~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~d--~---~-~~~  144 (256)
T d1qzza2          74 ADAYDWSAVRHVLDVGGGN-GGMLAAIALRAPHL-RGTLVEL-AGPAERARRRFADAGLADRVTVAEGD--F---F-KPL  144 (256)
T ss_dssp             HHTSCCTTCCEEEEETCTT-SHHHHHHHHHCTTC-EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECC--T---T-SCC
T ss_pred             HhcCCCccCCEEEEECCCC-CHHHHHHHHhhcCc-EEEEecC-hHHHHHHHHHHhhcCCcceeeeeeee--c---c-ccc
Confidence            3444567778898888865 78888999887 55 8899986 4333333    334432211111111  0   0 011


Q ss_pred             CCCccEEEEccC-----C---hHhHHHHHHHhhcCCcEEEEEcC
Q 017336          256 NGGVDRSVECTG-----N---IDNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       256 ~~~~d~vid~~g-----~---~~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      +.++|+|+-..-     .   ..++..+.+.|+|+ |+++++..
T Consensus       145 p~~~D~v~~~~vLh~~~d~~~~~lL~~i~~~Lkpg-G~llI~d~  187 (256)
T d1qzza2         145 PVTADVVLLSFVLLNWSDEDALTILRGCVRALEPG-GRLLVLDR  187 (256)
T ss_dssp             SCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             cccchhhhccccccccCcHHHHHHHHHHHhhcCCc-ceeEEEEe
Confidence            236898875421     1   13577889999997 99998764

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=83.72  E-value=1.5  Score=38.00  Aligned_cols=93  Identities=16%  Similarity=0.149  Sum_probs=62.5

Q ss_pred             ECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh---c-CCcee--------------ecCCCCCccHHHHHHHHcC
Q 017336          195 FGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---F-GVTDF--------------VNTSEHDRPIQEVIAEMTN  256 (373)
Q Consensus       195 ~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~---l-g~~~v--------------i~~~~~~~~~~~~~~~~~~  256 (373)
                      -+-++.|.-.+.+|+..|+..|++.+.+++..+.+++   + +....              +.....+  ....+.+ .+
T Consensus        51 D~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~D--a~~~~~~-~~  127 (375)
T d2dula1          51 DALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDD--ANRLMAE-RH  127 (375)
T ss_dssp             ESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESC--HHHHHHH-ST
T ss_pred             EcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehhh--hhhhhHh-hc
Confidence            3457778889999999998899999999998888865   2 21110              1011111  3233322 23


Q ss_pred             CCccE-EEEccCCh-HhHHHHHHHhhcCCcEEEEEcC
Q 017336          257 GGVDR-SVECTGNI-DNMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       257 ~~~d~-vid~~g~~-~~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      ..||+ .+|..|++ +++..++++++.+ |.+.+...
T Consensus       128 ~~fDvIDiDPfGs~~pfldsAi~a~~~~-Gll~vTaT  163 (375)
T d2dula1         128 RYFHFIDLDPFGSPMEFLDTALRSAKRR-GILGVTAT  163 (375)
T ss_dssp             TCEEEEEECCSSCCHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             CcCCcccCCCCCCcHHHHHHHHHHhccC-CEEEEEec
Confidence            37995 57888874 6789999999996 87776643

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=83.39  E-value=0.88  Score=32.11  Aligned_cols=33  Identities=15%  Similarity=0.062  Sum_probs=26.3

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHc---CCcEEEEEcCC
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIA---GASRIIGVDRS  222 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~---g~~~V~~~~~~  222 (373)
                      +++++|+|+|.+|.-.++++..+   |. .|..+.+.
T Consensus        18 p~~v~IiGgG~ig~E~A~~l~~~~~~g~-~Vtli~~~   53 (117)
T d1feca2          18 PKRALCVGGGYISIEFAGIFNAYKARGG-QVDLAYRG   53 (117)
T ss_dssp             CSEEEEECSSHHHHHHHHHHHHHSCTTC-EEEEEESS
T ss_pred             CCeEEEECCChHHHHHHHHhHhhccccc-ccceeccc
Confidence            58999999999999888776654   66 78888664

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=83.17  E-value=1.2  Score=32.90  Aligned_cols=38  Identities=32%  Similarity=0.315  Sum_probs=30.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHH
Q 017336          189 GSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRF  226 (373)
Q Consensus       189 ~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~  226 (373)
                      ..+|.|+|+|.+|...+..+...| +..++.++.++++.
T Consensus         5 ~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~   43 (146)
T d1ez4a1           5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRT   43 (146)
T ss_dssp             BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchh
Confidence            468999999999998887777766 45899999887653

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=83.12  E-value=4.4  Score=30.53  Aligned_cols=96  Identities=22%  Similarity=0.306  Sum_probs=56.0

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc---CCcEEEEEcC--ChhHHHHHHhc----CC---ce-------eec------CCCCC
Q 017336          190 SSVAVFGLGAVGLAAAEGARIA---GASRIIGVDR--SSKRFEEAKKF----GV---TD-------FVN------TSEHD  244 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~---g~~~V~~~~~--~~~~~~~~~~l----g~---~~-------vi~------~~~~~  244 (373)
                      .+|.|.|-|-+|.++...+...   +. .|+++.-  +.+....+-++    |.   +.       +++      +...+
T Consensus         1 ~kIgINGfGRIGR~v~R~~~~~~~~~i-~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~   79 (169)
T d1hdgo1           1 ARVAINGFGRIGRLVYRIIYERKNPDI-EVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD   79 (169)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCTTC-EEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred             CEEEEECCChHHHHHHHHHHhccCCCE-EEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCC
Confidence            3688999999999999877643   35 6777633  23444444332    11   10       110      00011


Q ss_pred             ccHHHHHHHHcCC--CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          245 RPIQEVIAEMTNG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       245 ~~~~~~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                            ..+...+  ++|+|+||+|.-...+.+...+..+ .+-+++..+.
T Consensus        80 ------p~~i~W~~~gvD~ViEcTG~f~t~~~~~~hl~~G-akkViiSAP~  123 (169)
T d1hdgo1          80 ------PSKLPWKDLGVDFVIESTGVFRNREKAELHLQAG-AKKVIITAPA  123 (169)
T ss_dssp             ------GGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCC
T ss_pred             ------hhhCCccccCCCEEEEecceeccccchhhhccCC-CceEEEeccc
Confidence                  1111111  7999999999866777888888886 5445554443

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.09  E-value=0.77  Score=34.02  Aligned_cols=89  Identities=15%  Similarity=-0.001  Sum_probs=48.9

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcC--CcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          190 SSVAVFGL-GAVGLAAAEGARIAG--ASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~la~~~g--~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      =+|.|+|+ |-+|+-.++++...+  ...+..+.++...-+.+...+.+.. .+.+..+           -.+.|++|-+
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~~~~~~~~~-----------~~~~d~vf~a   71 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSFD-----------FSSVGLAFFA   71 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGGCC-----------GGGCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccchhccchhhh-----------hccceEEEec
Confidence            46899998 999999999997543  2245555443221111111111111 1111111           1268999999


Q ss_pred             cCChHhHHHHHHHhhcCCcEEEEEc
Q 017336          266 TGNIDNMISAFECVHDGWGVAVLVG  290 (373)
Q Consensus       266 ~g~~~~~~~~~~~l~~~~g~~v~~g  290 (373)
                      .+........-+.+..+ .+++..+
T Consensus        72 ~p~~~s~~~~~~~~~~g-~~VID~S   95 (144)
T d2hjsa1          72 AAAEVSRAHAERARAAG-CSVIDLS   95 (144)
T ss_dssp             SCHHHHHHHHHHHHHTT-CEEEETT
T ss_pred             CCcchhhhhccccccCC-ceEEeec
Confidence            98855555566666664 5665543

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=82.85  E-value=2.5  Score=35.77  Aligned_cols=103  Identities=12%  Similarity=0.125  Sum_probs=63.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcC--ChhHHHHHHhcCCceeecCCCCC--------------------
Q 017336          187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR--SSKRFEEAKKFGVTDFVNTSEHD--------------------  244 (373)
Q Consensus       187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~--~~~~~~~~~~lg~~~vi~~~~~~--------------------  244 (373)
                      .+..+|+...+|..|.+++..++.+|..-++++..  +.+|.+.++.+|++.+......+                    
T Consensus        73 ~~~~~vv~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (331)
T d1tdja1          73 QKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPP  152 (331)
T ss_dssp             SCSSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSSHHHHHHHHHHHHHHHCCEECCS
T ss_pred             CCCCeeeecccchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEEcCcccccchhhhhhhhhcCCCccccc
Confidence            34455666667888999999999999954444432  46788889999997543221110                    


Q ss_pred             ---c-------cHHHHHHHHcCCCccEEEEccCChHhHH---HHHHHhhcCCcEEEEEcC
Q 017336          245 ---R-------PIQEVIAEMTNGGVDRSVECTGNIDNMI---SAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       245 ---~-------~~~~~~~~~~~~~~d~vid~~g~~~~~~---~~~~~l~~~~g~~v~~g~  291 (373)
                         .       .+...+.+. .+.+|.||-++|+...+.   ..++.+.+. -+++.+..
T Consensus       153 ~~~~~~~~g~~t~~~Ei~~q-~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~-~~ii~ve~  210 (331)
T d1tdja1         153 FDHPMVIAGQGTLALELLQQ-DAHLDRVFVPVGGGGLAAGVAVLIKQLMPQ-IKVIAVEA  210 (331)
T ss_dssp             SCCHHHHHHHHHHHHHHHHH-CTTCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEEE
T ss_pred             cCChHHhhhhhhHHHHHHHh-cCCCCEEEEeCChhHHHHHHHHHHHHhCCC-cEEEEecc
Confidence               0       011112222 136899999998765543   455555565 67776643

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.80  E-value=1.2  Score=37.82  Aligned_cols=33  Identities=18%  Similarity=0.322  Sum_probs=29.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC
Q 017336          188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR  221 (373)
Q Consensus       188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~  221 (373)
                      ..++|||+|+ |-+|...+..+...|. +|+++++
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~-~V~~~d~   48 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDN   48 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEEC
Confidence            4578999987 9999999999999999 8999864

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.58  E-value=0.52  Score=37.77  Aligned_cols=29  Identities=31%  Similarity=0.407  Sum_probs=26.5

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCcEEEEEcC
Q 017336          192 VAVFGLGAVGLAAAEGARIAGASRIIGVDR  221 (373)
Q Consensus       192 vlI~G~g~~G~~ai~la~~~g~~~V~~~~~  221 (373)
                      |+|+|+|+.|+.++..|.++|. +|++++.
T Consensus         6 viVIG~GpaGl~aA~~aa~~G~-kV~viE~   34 (235)
T d1h6va1           6 LIIIGGGSGGLAAAKEAAKFDK-KVMVLDF   34 (235)
T ss_dssp             EEEECCSHHHHHHHHHHGGGCC-CEEEECC
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-eEEEEec
Confidence            7889999999999999999999 7999974

>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermotoga maritima [TaxId: 2336]

Probab=82.53  E-value=2.9  Score=34.63  Aligned_cols=47  Identities=21%  Similarity=0.195  Sum_probs=35.5

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCcEEEEEcC--ChhHHHHHHhcCCceee
Q 017336          192 VAVFGLGAVGLAAAEGARIAGASRIIGVDR--SSKRFEEAKKFGVTDFV  238 (373)
Q Consensus       192 vlI~G~g~~G~~ai~la~~~g~~~V~~~~~--~~~~~~~~~~lg~~~vi  238 (373)
                      |+...+|..|.++...++.+|..-++.+..  ++.|.+.++.+|++.+.
T Consensus        58 vv~~SsGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~GA~V~~  106 (293)
T d1o58a_          58 IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVL  106 (293)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred             eEEecCcchhhHHHHhhhhccceeEeeccccccHHHeeccccCCcEEEE
Confidence            333466999999999999999865555533  56788999999987543

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=82.48  E-value=0.67  Score=36.98  Aligned_cols=33  Identities=18%  Similarity=0.222  Sum_probs=26.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc--CCcEEEEEcCCh
Q 017336          190 SSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSS  223 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~--g~~~V~~~~~~~  223 (373)
                      .+|+|+|+|+.|+.|+..+++.  |. .|++++..+
T Consensus         2 ~kv~iIGaGpaGl~aA~~L~~~~~~~-~V~v~e~~~   36 (230)
T d1cjca2           2 PQICVVGSGPAGFYTAQHLLKHHSRA-HVDIYEKQL   36 (230)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHCSSC-EEEEECSSS
T ss_pred             CeEEEECccHHHHHHHHHHHhcCCCC-eEEEEeCCC
Confidence            3799999999999999877654  66 898887764

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=82.45  E-value=5.7  Score=29.89  Aligned_cols=95  Identities=24%  Similarity=0.344  Sum_probs=57.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCcEEEEEcC---ChhHHHHHHhcCC-------ce-------eec------CCCCCcc
Q 017336          191 SVAVFGLGAVGLAAAEGARIA-GASRIIGVDR---SSKRFEEAKKFGV-------TD-------FVN------TSEHDRP  246 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~-g~~~V~~~~~---~~~~~~~~~~lg~-------~~-------vi~------~~~~~~~  246 (373)
                      +|.|.|-|-+|+++...+... .. .++++.-   +.+....+-++-.       +.       .++      +...+  
T Consensus         3 kIgINGFGRIGR~v~R~~~~~~~~-~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~--   79 (169)
T d1u8fo1           3 KVGVNGFGRIGRLVTRAAFNSGKV-DIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERD--   79 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSS-EEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS--
T ss_pred             EEEEECCcHHHHHHHHHHHHCCCc-EEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCC--
Confidence            688999999999999877655 46 6777633   3345555544211       10       111      00111  


Q ss_pred             HHHHHHHHcCC--CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          247 IQEVIAEMTNG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       247 ~~~~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                          ..+....  ++|+|+||+|.-...+.+...+..+ .+-+++..+.
T Consensus        80 ----p~~i~W~~~~vDiViEcTG~f~~~~~~~~hl~~g-akkViiSaP~  123 (169)
T d1u8fo1          80 ----PSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGG-AKRVIISAPS  123 (169)
T ss_dssp             ----GGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGT-CSEEEESSCC
T ss_pred             ----hhhCCccccCCCEEEEecceeccHHHHHHHHhcC-CceEeecccc
Confidence                1122222  7999999999866667777788886 5555555443

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.28  E-value=0.71  Score=39.31  Aligned_cols=33  Identities=30%  Similarity=0.318  Sum_probs=28.3

Q ss_pred             CEE-EEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          190 SSV-AVFGL-GAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       190 ~~v-lI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      ++| ||+|+ |-+|...+..+...|+ +|+++++..
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~-~V~~i~r~~   35 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGY-EVHGIVRRS   35 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence            457 99987 8999999999988999 899998753

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.15  E-value=0.56  Score=39.71  Aligned_cols=31  Identities=42%  Similarity=0.623  Sum_probs=27.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      -|+|+|+|..|+.++.-|...|+ +|++++..
T Consensus        21 DVvVIGaG~aGl~AA~~aa~~G~-~V~vlEK~   51 (317)
T d1qo8a2          21 QVLVVGAGSAGFNASLAAKKAGA-NVILVDKA   51 (317)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCC
Confidence            48999999999999999999999 79999754

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=82.12  E-value=3.5  Score=31.05  Aligned_cols=95  Identities=27%  Similarity=0.343  Sum_probs=56.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCC--hhHHHHHHhc----C---Cce-------eec------CCCCCccH
Q 017336          191 SVAVFGLGAVGLAAAEGARIA-GASRIIGVDRS--SKRFEEAKKF----G---VTD-------FVN------TSEHDRPI  247 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~-g~~~V~~~~~~--~~~~~~~~~l----g---~~~-------vi~------~~~~~~~~  247 (373)
                      +|.|.|-|-+|.+++..+... .. .|+++.-.  .+....+-++    |   .+.       +++      +.+.+   
T Consensus         3 kigINGFGRIGR~v~R~~~~~~~i-~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~---   78 (166)
T d1gado1           3 KVGINGFGRIGRIVFRAAQKRSDI-EIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERD---   78 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSE-EEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS---
T ss_pred             EEEEECCcHHHHHHHHHHhhCCCe-EEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCC---
Confidence            578889999999999888765 35 67777433  2333333322    1   110       111      01111   


Q ss_pred             HHHHHHHcCC--CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336          248 QEVIAEMTNG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  293 (373)
Q Consensus       248 ~~~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  293 (373)
                         ..+...+  ++|+|+||+|.-...+.+...|..+ .+-|++..+.
T Consensus        79 ---p~~i~W~~~gvDiViEcTG~f~t~~~~~~hl~~g-akkViiSaP~  122 (166)
T d1gado1          79 ---PANLKWDEVGVDVVAEATGLFLTDETARKHITAG-AKKVVMTGPS  122 (166)
T ss_dssp             ---GGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTT-CSEEEESSCC
T ss_pred             ---hHHCCccccCCCEEEEccccccCHHHHHHHhcCC-CceEEeeccc
Confidence               1111111  7999999999766677888889886 5555555444

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=82.05  E-value=1.1  Score=31.58  Aligned_cols=35  Identities=14%  Similarity=0.023  Sum_probs=27.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCc--EEEEEcCC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGAS--RIIGVDRS  222 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~--~V~~~~~~  222 (373)
                      .+++++|+|+|.+|.=++..++.++..  .|..+.+.
T Consensus        19 ~p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~   55 (117)
T d1aoga2          19 PPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRG   55 (117)
T ss_dssp             CCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESS
T ss_pred             cCCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEecc
Confidence            457999999999999988887777642  58788654

>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Malate oxidoreductase (malic enzyme)
species: Thermotoga maritima [TaxId: 2336]

Probab=82.02  E-value=1.3  Score=35.19  Aligned_cols=39  Identities=28%  Similarity=0.350  Sum_probs=33.1

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          184 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       184 ~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      ..--.+++|+++|+|..|...+++....+.++++.+++.
T Consensus        21 g~~l~d~riv~~GAGsAg~gia~~l~~~~~~~i~~~D~~   59 (222)
T d1vl6a1          21 EKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK   59 (222)
T ss_dssp             TCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred             CCChhhcEEEEEChHHHHHHHHHHHHHhcccceEeecce
Confidence            344467899999999999999999999999899999774

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.93  E-value=0.46  Score=38.03  Aligned_cols=34  Identities=18%  Similarity=0.155  Sum_probs=27.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCc------EEEEEcCCh
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAGAS------RIIGVDRSS  223 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g~~------~V~~~~~~~  223 (373)
                      .+|+|+|+|+.|++|+..+.+.|..      .|.+.+..+
T Consensus         3 ~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~   42 (239)
T d1lqta2           3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLP   42 (239)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred             cEEEEECcCHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence            4899999999999999888877621      688887655

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=81.71  E-value=0.99  Score=35.02  Aligned_cols=86  Identities=13%  Similarity=0.127  Sum_probs=56.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336          188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  267 (373)
Q Consensus       188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g  267 (373)
                      .+++|.|+|.|.+|...+++++.+|. +|+..++.....       ........  +  +.+.++     ..|+|+.+..
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-------~~~~~~~~--~--l~ell~-----~sDii~i~~p  105 (188)
T d1sc6a1          43 RGKKLGIIGYGHIGTQLGILAESLGM-YVYFYDIENKLP-------LGNATQVQ--H--LSDLLN-----MSDVVSLHVP  105 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCC-------CTTCEECS--C--HHHHHH-----HCSEEEECCC
T ss_pred             cceEEEEeecccchhhhhhhcccccc-eEeeccccccch-------hhhhhhhh--h--HHHHHh-----hccceeeccc
Confidence            57899999999999999999999999 899997653211       01111111  1  333232     2588887765


Q ss_pred             ChH-----hHHHHHHHhhcCCcEEEEEcC
Q 017336          268 NID-----NMISAFECVHDGWGVAVLVGV  291 (373)
Q Consensus       268 ~~~-----~~~~~~~~l~~~~g~~v~~g~  291 (373)
                      -.+     +-...++.|+++ ..+|.++.
T Consensus       106 lt~~T~~li~~~~l~~mk~~-a~lIN~aR  133 (188)
T d1sc6a1         106 ENPSTKNMMGAKEISLMKPG-SLLINASR  133 (188)
T ss_dssp             SSTTTTTCBCHHHHHHSCTT-EEEEECSC
T ss_pred             CCcchhhhccHHHHhhCCCC-CEEEEcCc
Confidence            221     234777888886 77776654

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=81.45  E-value=0.59  Score=39.54  Aligned_cols=32  Identities=44%  Similarity=0.667  Sum_probs=27.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336          191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  223 (373)
Q Consensus       191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~  223 (373)
                      -|+|+|+|..|+.++..|...|+ +|++++..+
T Consensus        25 DVvVIG~G~aGl~aA~~la~~G~-~V~llEk~~   56 (322)
T d1d4ca2          25 DVVIIGSGGAGLAAAVSARDAGA-KVILLEKEP   56 (322)
T ss_dssp             SEEEECSSHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred             eEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            38999999999999988889999 799997643

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=81.34  E-value=1.5  Score=32.40  Aligned_cols=36  Identities=31%  Similarity=0.534  Sum_probs=29.3

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhH
Q 017336          190 SSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKR  225 (373)
Q Consensus       190 ~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~  225 (373)
                      ++|.|+|+|.+|..++..+...| +..++.++.++++
T Consensus         2 kKI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~   38 (146)
T d1hyha1           2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAK   38 (146)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CeEEEECcCHHHHHHHHHHHhcCCCceEEEEecccch
Confidence            67889999999988887777666 4588899888776

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=81.29  E-value=0.66  Score=38.27  Aligned_cols=30  Identities=27%  Similarity=0.499  Sum_probs=22.9

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336          191 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS  222 (373)
Q Consensus       191 ~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~  222 (373)
                      +|||+|+ |-+|...+..+...|.  ++++.+.
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~--~v~~~~~   32 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN--LIALDVH   32 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE--EEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC--EEEEECC
Confidence            5999998 9999998888777773  5555443

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=81.19  E-value=2.6  Score=36.53  Aligned_cols=55  Identities=22%  Similarity=0.171  Sum_probs=40.5

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEc--CChhHHHHHHhcCCceeec
Q 017336          185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD--RSSKRFEEAKKFGVTDFVN  239 (373)
Q Consensus       185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~--~~~~~~~~~~~lg~~~vi~  239 (373)
                      +++++.+|+-..+|..|.+.+.+|+.+|.+-++++.  .+++|.+.++.+|++.+..
T Consensus       140 ~~~~g~~VVeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~  196 (382)
T d1wkva1         140 RVEKGSLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVD  196 (382)
T ss_dssp             TSCTTCEEEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCCEEEEeCCcHHHHHHHHHHHHcCCCEEEEeeccccccccccccccCcceeec
Confidence            466776654446699999999999999995444443  2567888899999986543

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=80.68  E-value=1.6  Score=35.87  Aligned_cols=29  Identities=28%  Similarity=0.367  Sum_probs=24.5

Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCcEEEEEc
Q 017336          192 VAVFGL-GAVGLAAAEGARIAGASRIIGVD  220 (373)
Q Consensus       192 vlI~G~-g~~G~~ai~la~~~g~~~V~~~~  220 (373)
                      |||+|+ |-+|...+..+...|...|++++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d   31 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVD   31 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEE
Confidence            799987 89999988888888975788875

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=80.44  E-value=1  Score=33.37  Aligned_cols=83  Identities=19%  Similarity=0.164  Sum_probs=42.4

Q ss_pred             CEEEEECC-CHHHHHHHHH-HHHc--CCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336          190 SSVAVFGL-GAVGLAAAEG-ARIA--GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  265 (373)
Q Consensus       190 ~~vlI~G~-g~~G~~ai~l-a~~~--g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~  265 (373)
                      ++|.|+|| |.+|+-.+++ +.+.  -...++...++........ ++..........+  ..    .+  .++|++|-|
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~-~~~~~~~~~~~~~--~~----~~--~~~DivF~a   72 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPS-FGGTTGTLQDAFD--LE----AL--KALDIIVTC   72 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCG-GGTCCCBCEETTC--HH----HH--HTCSEEEEC
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccc-ccCCceeeecccc--hh----hh--hcCcEEEEe
Confidence            37899998 9999999974 4432  3335665654432211110 1111110000111  10    11  168999999


Q ss_pred             cCChHhHHHHHHHhhc
Q 017336          266 TGNIDNMISAFECVHD  281 (373)
Q Consensus       266 ~g~~~~~~~~~~~l~~  281 (373)
                      ++.......+-++...
T Consensus        73 ~~~~~s~~~~~~~~~~   88 (146)
T d1t4ba1          73 QGGDYTNEIYPKLRES   88 (146)
T ss_dssp             SCHHHHHHHHHHHHHT
T ss_pred             cCchHHHHhhHHHHhc
Confidence            9984444444454454