Citrus Sinensis ID: 017346
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 373 | ||||||
| 255544083 | 358 | conserved hypothetical protein [Ricinus | 0.943 | 0.983 | 0.683 | 1e-141 | |
| 356538345 | 364 | PREDICTED: uncharacterized protein LOC10 | 0.949 | 0.972 | 0.656 | 1e-140 | |
| 255638059 | 364 | unknown [Glycine max] | 0.949 | 0.972 | 0.653 | 1e-140 | |
| 356541526 | 374 | PREDICTED: uncharacterized protein LOC10 | 0.943 | 0.941 | 0.653 | 1e-138 | |
| 224075812 | 320 | predicted protein [Populus trichocarpa] | 0.857 | 1.0 | 0.707 | 1e-132 | |
| 224075814 | 344 | predicted protein [Populus trichocarpa] | 0.916 | 0.994 | 0.622 | 1e-128 | |
| 449452130 | 351 | PREDICTED: uncharacterized protein LOC10 | 0.871 | 0.925 | 0.641 | 1e-128 | |
| 359495060 | 367 | PREDICTED: uncharacterized protein LOC10 | 0.959 | 0.975 | 0.609 | 1e-127 | |
| 357457035 | 365 | hypothetical protein MTR_3g021060 [Medic | 0.849 | 0.868 | 0.657 | 1e-126 | |
| 359495056 | 361 | PREDICTED: uncharacterized protein LOC10 | 0.857 | 0.886 | 0.631 | 1e-123 |
| >gi|255544083|ref|XP_002513104.1| conserved hypothetical protein [Ricinus communis] gi|223548115|gb|EEF49607.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust.
Identities = 250/366 (68%), Positives = 291/366 (79%), Gaps = 14/366 (3%)
Query: 6 QRSYSELINVGIIVICSCLFVVNSDSDADADAGAKWRRPPVERSCANAYEGRWVYDESYP 65
QRS L I+++CSCL + NS + K R+ ++S + Y+G W+YD SYP
Sbjct: 7 QRSCHVLF--AIVMLCSCLCLANS-------SNPKLRKQ--KKSNCDVYQGSWLYDVSYP 55
Query: 66 LYDSSACPNIRKEFDCNECGRPDHLYLKYRWQPDNCDLPRFDAKDFLWRLSGKKIMFIGD 125
LYDSSACP IRKEFDC + GRPDHLYL+YRWQP +CDLPRFD DFL RL GKKIMFIGD
Sbjct: 56 LYDSSACPFIRKEFDCLKYGRPDHLYLQYRWQPMDCDLPRFDGPDFLQRLMGKKIMFIGD 115
Query: 126 SVSLNQMQSLLCLLQTGLPNTNIIGQSNDTITTVIFEDYDVSVILFHSLYLVDIQVVENV 185
SVSLN +SLLCLL +PN+NI + N +TVIFEDY VSV LFHSL LVDI+ ENV
Sbjct: 116 SVSLNHYESLLCLLHAAVPNSNITQEKN--TSTVIFEDYGVSVTLFHSLLLVDIEQ-ENV 172
Query: 186 GRVLKLNSLKDGNIWKNIDVLVFNTWLWWYRRGPKQPWDYVEFDNKILKDMDRMDAFRQG 245
GRVLKL+SLK+G+IWK++DVLVFNTWLWWYRRGPKQPWDYV+ ILKDMDRM AFR+
Sbjct: 173 GRVLKLDSLKNGDIWKDMDVLVFNTWLWWYRRGPKQPWDYVQDGEAILKDMDRMVAFRKA 232
Query: 246 LKTWAKWVDSDVDTTKTTVIFQGVSPSHYNGTEWDEPEVTNCANEKQPIVGSKYPGGLPE 305
L TWAKWVDSDVDT KT+V FQG+SPSHYNG+EW+EP VTNC+ E +PI GS Y G P
Sbjct: 233 LTTWAKWVDSDVDTNKTSVFFQGISPSHYNGSEWNEPGVTNCSKETEPISGSSYSRGSPL 292
Query: 306 AALVVKDVLRTVKKPVHLLDITTLSQLRKDAHPSSFNGFKAMDCTHWCVAGLPDTWNQLL 365
A V++DVL ++KKPVHLL+ITTLSQLRKDAHPSS NGF+ MDCTHWC+AGLPDTWN LL
Sbjct: 293 ALSVLEDVLSSMKKPVHLLNITTLSQLRKDAHPSSHNGFRGMDCTHWCIAGLPDTWNDLL 352
Query: 366 YTALVN 371
YTAL+N
Sbjct: 353 YTALLN 358
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356538345|ref|XP_003537664.1| PREDICTED: uncharacterized protein LOC100816246 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|255638059|gb|ACU19344.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356541526|ref|XP_003539226.1| PREDICTED: uncharacterized protein LOC100784562 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224075812|ref|XP_002304779.1| predicted protein [Populus trichocarpa] gi|222842211|gb|EEE79758.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224075814|ref|XP_002304780.1| predicted protein [Populus trichocarpa] gi|222842212|gb|EEE79759.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|449452130|ref|XP_004143813.1| PREDICTED: uncharacterized protein LOC101214809 [Cucumis sativus] gi|449515365|ref|XP_004164720.1| PREDICTED: uncharacterized LOC101214809 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|359495060|ref|XP_003634906.1| PREDICTED: uncharacterized protein LOC100852743 [Vitis vinifera] gi|296081292|emb|CBI17736.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|357457035|ref|XP_003598798.1| hypothetical protein MTR_3g021060 [Medicago truncatula] gi|355487846|gb|AES69049.1| hypothetical protein MTR_3g021060 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|359495056|ref|XP_003634905.1| PREDICTED: uncharacterized protein LOC100852636 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 373 | ||||||
| TAIR|locus:2055425 | 385 | TBL37 "AT2G34070" [Arabidopsis | 0.860 | 0.833 | 0.513 | 1.6e-95 | |
| TAIR|locus:2029959 | 380 | TBL38 "AT1G29050" [Arabidopsis | 0.855 | 0.839 | 0.515 | 4.2e-95 | |
| TAIR|locus:2041574 | 367 | TBL39 "AT2G42570" [Arabidopsis | 0.930 | 0.945 | 0.484 | 6.8e-95 | |
| TAIR|locus:2055878 | 364 | AT2G31110 "AT2G31110" [Arabido | 0.852 | 0.873 | 0.501 | 3e-92 | |
| TAIR|locus:2099402 | 356 | TBL41 "TRICHOME BIREFRINGENCE- | 0.847 | 0.887 | 0.509 | 2.5e-90 | |
| TAIR|locus:2037498 | 359 | TBL42 "TRICHOME BIREFRINGENCE- | 0.852 | 0.885 | 0.456 | 3.7e-80 | |
| TAIR|locus:2178813 | 402 | PMR5 "AT5G58600" [Arabidopsis | 0.863 | 0.800 | 0.414 | 4.8e-71 | |
| TAIR|locus:2080280 | 379 | TBL36 "AT3G54260" [Arabidopsis | 0.852 | 0.839 | 0.385 | 1.7e-57 | |
| TAIR|locus:2045688 | 398 | TBL45 "AT2G30010" [Arabidopsis | 0.793 | 0.743 | 0.398 | 4.6e-57 | |
| TAIR|locus:2065069 | 424 | TBL28 "TRICHOME BIREFRINGENCE- | 0.772 | 0.679 | 0.313 | 1.8e-54 |
| TAIR|locus:2055425 TBL37 "AT2G34070" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
Identities = 167/325 (51%), Positives = 227/325 (69%)
Query: 47 ERSCANAYEGRWVYDESYPLYDSSACPNIRKEFDCNECGRPDHLYLKYRWQPDNCDLPRF 106
+ S N ++GRWV+D SYP YDSS CP I EFDC + GRPD +LKY WQPD+C +PRF
Sbjct: 61 QTSGCNLFQGRWVFDASYPFYDSSTCPFIDGEFDCLKFGRPDKQFLKYSWQPDSCTVPRF 120
Query: 107 DAKDFLWRLSGKKIMFIGDSVSLNQMQSLLCLLQTGLPNTNIIGQSNDTITTVIFEDYDV 166
D + FL + GK++MF+GDS+SLN +SL C++ + +PNT ++++ F++YDV
Sbjct: 121 DGEAFLKKWRGKRVMFVGDSLSLNMWESLACMIHSSVPNTKTTFLKRTPLSSLTFQEYDV 180
Query: 167 SVILFHSLYLVDIQVVENVGRVLKLNSLKDG-NIWKNIDVLVFNTWLWWYRRGPK-QPWD 224
++ L+ + YLVDI E+VGRVL L +++DG + WKN+D+LVFN+W WW G + Q WD
Sbjct: 181 TLFLYRTPYLVDISK-ESVGRVLNLGAIEDGADAWKNMDLLVFNSWHWWTHTGVQSQGWD 239
Query: 225 YVEFDNKILKDMDRMDAFRQGLKTWAKWXXXXXXXXXXXXIFQGVSPSHYNGTEWDEPEV 284
++ + +++DMDR+DAF +GL TW +W FQG+SP+HY G EW+EP
Sbjct: 240 FIRDGSSLMRDMDRLDAFNKGLTTWGQWVDQNVNVSQTRVFFQGISPTHYMGREWNEPRK 299
Query: 285 TNCANEKQPIVGSKYPGGLPEAALVVKDVLRTVKKPVHLLDITTLSQLRKDAHPSSFNGF 344
T C + QP+ GS YPGG AA +V VL T++ PV+LLDITTLSQLRKDAHPS++ G
Sbjct: 300 T-CNGQMQPLTGSTYPGGSLPAASIVSRVLSTMRTPVYLLDITTLSQLRKDAHPSTYGGD 358
Query: 345 KAMDCTHWCVAGLPDTWNQLLYTAL 369
DC+HWC+ GLPDTWNQLLY AL
Sbjct: 359 GGTDCSHWCLPGLPDTWNQLLYAAL 383
|
|
| TAIR|locus:2029959 TBL38 "AT1G29050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2041574 TBL39 "AT2G42570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2055878 AT2G31110 "AT2G31110" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2099402 TBL41 "TRICHOME BIREFRINGENCE-LIKE 41" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2037498 TBL42 "TRICHOME BIREFRINGENCE-LIKE 42" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2080280 TBL36 "AT3G54260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2045688 TBL45 "AT2G30010" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2065069 TBL28 "TRICHOME BIREFRINGENCE-LIKE 28" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 373 | |||
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 1e-126 | |
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 8e-97 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 9e-20 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
Score = 367 bits (943), Expect = e-126
Identities = 163/346 (47%), Positives = 220/346 (63%), Gaps = 18/346 (5%)
Query: 42 RRPPVE--RSCANAYEGRWVYDESYPLYDSSACPN-IRKEFDCNECGRPDHLYLKYRWQP 98
RRP ++ +S + G WV D+SYPLY SS CP I EF+C GRPD YLKYRWQP
Sbjct: 42 RRPSLQANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQP 101
Query: 99 DNCDLPRFDAKDFLWRLSGKKIMFIGDSVSLNQMQSLLCLLQTGLPNTNIIGQSNDTITT 158
NC+LPRF+ +FL ++ GK +MF+GDS+ NQ +SL+CL+ + +P+T D ++T
Sbjct: 102 LNCELPRFNGLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLST 161
Query: 159 VIFEDYDVSVILFHSLYLVDIQVVENVGRVLKLNSLK-DGNIWKNIDVLVFNTWLWWYRR 217
F DY VS+ + + YLVDI V+ RVLKL + + N W++ DVL+FNT WW +
Sbjct: 162 FKFLDYGVSISFYKAPYLVDIDAVQG-KRVLKLEEISGNANAWRDADVLIFNTGHWWSHQ 220
Query: 218 GPKQPWDYVEFDNKILKDMDRMDAFRQGLKTWAKWVDSDVDTTKTTVIFQGVSPSHYNGT 277
G Q WDY+E +DMDR+ A + L+TWA WVD++VD ++T V FQ +SP+HYN +
Sbjct: 221 GSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPS 280
Query: 278 EWDEPEVT---NCANEKQPIVGSKYPGGLPEAALVVKDVLRTVKKPVHLLDITTLSQLRK 334
EW T NC E P+ G YPG P+ VV +V+R + P +LLDIT LS+LRK
Sbjct: 281 EWSAGASTTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRK 340
Query: 335 DAHPSSFNGF----------KAMDCTHWCVAGLPDTWNQLLYTALV 370
D HPS ++G ++ DC+HWC+ GLPDTWNQL YTAL
Sbjct: 341 DGHPSIYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF 386
|
Length = 387 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 373 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.93 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 98.8 | |
| cd01841 | 174 | NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa | 96.34 | |
| cd01829 | 200 | SGNH_hydrolase_peri2 SGNH_peri2; putative periplas | 95.94 | |
| cd01834 | 191 | SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG | 95.47 | |
| cd01820 | 214 | PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A | 95.42 | |
| cd01838 | 199 | Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd | 94.03 | |
| COG2845 | 354 | Uncharacterized protein conserved in bacteria [Fun | 93.88 | |
| cd01827 | 188 | sialate_O-acetylesterase_like1 sialate O-acetylest | 85.42 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-114 Score=852.65 Aligned_cols=323 Identities=49% Similarity=0.983 Sum_probs=300.1
Q ss_pred CCCCCCCCCCcceeeCCCCCCCCCCCCC-CCCCCCccccCCCCCCccccccccCCCCCCCCCCHHHHHHHhcCCcEEEEe
Q 017346 46 VERSCANAYEGRWVYDESYPLYDSSACP-NIRKEFDCNECGRPDHLYLKYRWQPDNCDLPRFDAKDFLWRLSGKKIMFIG 124 (373)
Q Consensus 46 ~~~~C~d~~~G~WV~d~~~plY~~~~Cp-~i~~~~~C~~nGRpD~~y~~WrWqP~gC~Lprfd~~~fl~~lrgk~i~FVG 124 (373)
.+++| |+|+|+||+|+++|+|++++|| ||++++||++|||||++|++|||||++|+||||||.+||++||||||||||
T Consensus 49 ~~~~C-D~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FVG 127 (387)
T PLN02629 49 NQSTC-ALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVG 127 (387)
T ss_pred Ccccc-CCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEec
Confidence 46789 9999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHhhcccCCCcceeeccCCCeEEEEEecCCceEEEEeccceeeeeeecccceeEEeccCCCC-CCcccc
Q 017346 125 DSVSLNQMQSLLCLLQTGLPNTNIIGQSNDTITTVIFEDYDVSVILFHSLYLVDIQVVENVGRVLKLNSLKDG-NIWKNI 203 (373)
Q Consensus 125 DSl~Rn~~~SL~ClL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLv~~~~~~~~~~~l~lD~~~~~-~~w~~~ 203 (373)
|||+|||||||+|||++++|...+...++++..+|+|++||+||+||||||||+. ...+..+.|+||.++.. +.|+++
T Consensus 128 DSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~-~~~~~~~~l~LD~id~~a~~w~~~ 206 (387)
T PLN02629 128 DSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDI-DAVQGKRVLKLEEISGNANAWRDA 206 (387)
T ss_pred cccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEee-ecCCCceeEEecCcchhhhhhccC
Confidence 9999999999999999998876655566778899999999999999999999997 44455678999999865 889999
Q ss_pred cEEEEecccccccCCCCCCcceeccCceecccCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEeecCCCCCCCCCCCCCC
Q 017346 204 DVLVFNTWLWWYRRGPKQPWDYVEFDNKILKDMDRMDAFRQGLKTWAKWVDSDVDTTKTTVIFQGVSPSHYNGTEWDEPE 283 (373)
Q Consensus 204 DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~~~~~VffRt~sP~Hf~~g~W~~g~ 283 (373)
|||||||||||.+.+..++++|++.|+.++++|++.+||++||+||++||++++++.+++|||||+||+||+||+||+|+
T Consensus 207 DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hfe~g~Wn~gg 286 (387)
T PLN02629 207 DVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGA 286 (387)
T ss_pred CEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCcccccCCCcCCCC
Confidence 99999999999999888899999999999999999999999999999999999998999999999999999999999873
Q ss_pred ---CCCCCCCCccCCCCCCCCCChHHHHHHHHHHhhcCCCeEEecccccccccccCCCCCCCCC----------CCCCcc
Q 017346 284 ---VTNCANEKQPIVGSKYPGGLPEAALVVKDVLRTVKKPVHLLDITTLSQLRKDAHPSSFNGF----------KAMDCT 350 (373)
Q Consensus 284 ---~g~C~~~t~P~~~~~~~~~~~~~~~~v~~v~~~~~~~v~lLDIt~ls~~R~DaHp~~y~~~----------~~~DC~ 350 (373)
+|+|+++|+|+.++++.++...+++++++++++++.+|++||||.||++|||||||+|++. .++||+
T Consensus 287 ~~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHPs~Y~~~~~~~~~~~p~~~~DC~ 366 (387)
T PLN02629 287 STTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGDLSPSQRANPDRSADCS 366 (387)
T ss_pred CCCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCCCCcccccCCCchhhccCCCCCCCcc
Confidence 3689999999997777777777788999999999999999999999999999999999742 468999
Q ss_pred ccccCCchHHHHHHHHHHHh
Q 017346 351 HWCVAGLPDTWNQLLYTALV 370 (373)
Q Consensus 351 HWClPGv~D~WN~lL~~~L~ 370 (373)
||||||||||||||||++|+
T Consensus 367 HWCLPGvpDTWNelL~a~L~ 386 (387)
T PLN02629 367 HWCLPGLPDTWNQLFYTALF 386 (387)
T ss_pred cccCCCCCccHHHHHHHHHh
Confidence 99999999999999999997
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases | Back alignment and domain information |
|---|
| >cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins | Back alignment and domain information |
|---|
| >COG2845 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 373 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-07 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.8 bits (123), Expect = 3e-07
Identities = 51/385 (13%), Positives = 115/385 (29%), Gaps = 119/385 (30%)
Query: 73 PNIRKEFDCN-------------ECGRPDHLYLKYRWQPDNCDLPRFDAKDFLWRL--SG 117
FDC E DH+ + D W L
Sbjct: 27 DAFVDNFDCKDVQDMPKSILSKEEI---DHIIM----SKDAVSGTLR----LFWTLLSKQ 75
Query: 118 KKI--MFIGDSVSLN--------QMQSLLCLLQTGLPNTNIIGQSNDTITTV-IFEDYDV 166
+++ F+ + + +N + + Q + I Q + +F Y+V
Sbjct: 76 EEMVQKFVEEVLRINYKFLMSPIKTEQ----RQPSMMTRMYIEQRDRLYNDNQVFAKYNV 131
Query: 167 SVI-LFHSL--YLVDIQVVENV--------GR-VLKLNSLKDGNIWKNIDVLVFNTWLWW 214
S + + L L++++ +NV G+ + L+ + +D +F WL
Sbjct: 132 SRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIF--WLNL 189
Query: 215 YRRGPKQPWDYVEFDNKILKDMD---------------RMDAFRQGLKT----------- 248
P +E K+L +D R+ + + L+
Sbjct: 190 KNC--NSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL 247
Query: 249 ------WAKWVDSDVD-------TTKTTVIFQGVSPSHYNGTEWDEPEVTNCANEKQPIV 295
+ + TT+ + +S + D +T +E + ++
Sbjct: 248 LVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL 307
Query: 296 GSKY----PGGLPEAALVVKDVLRTVKKPVHLLDITTLSQLRKDAHPSSFNGFKAMDCTH 351
KY P LP + ++ +++ +D ++++ +K ++C
Sbjct: 308 -LKYLDCRPQDLPREV-----------LTTNPRRLSIIAESIRD-GLATWDNWKHVNCDK 354
Query: 352 W------CVAGLPDTWNQLLYTALV 370
+ L + ++ L
Sbjct: 355 LTTIIESSLNVLEPAEYRKMFDRLS 379
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 373 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 96.83 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0016 Score=57.00 Aligned_cols=121 Identities=14% Similarity=0.158 Sum_probs=71.0
Q ss_pred ccEEEEecccccccCCCCCCcceeccCceecccCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEeecCCCCCCCCCCCCC
Q 017346 203 IDVLVFNTWLWWYRRGPKQPWDYVEFDNKILKDMDRMDAFRQGLKTWAKWVDSDVDTTKTTVIFQGVSPSHYNGTEWDEP 282 (373)
Q Consensus 203 ~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~~~~~VffRt~sP~Hf~~g~W~~g 282 (373)
+|+|||+.|..=.. ...+.|+..|+++++-+.+. .++++|+|-+..|......
T Consensus 75 pd~Vvi~~G~ND~~--------------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~~~~~----- 127 (200)
T 4h08_A 75 FDVIHFNNGLHGFD--------------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVRTGEG----- 127 (200)
T ss_dssp CSEEEECCCSSCTT--------------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCEESGG-----
T ss_pred CCeEEEEeeeCCCC--------------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCccccc-----
Confidence 79999999965110 11357888888888877653 3477899999988653110
Q ss_pred CCCCCCCCCccCCCCCCCCCChHHHHHHHHHHhhcCCCeEEecccccccccccCCCCCCCCCCCCCccccccCCchHHHH
Q 017346 283 EVTNCANEKQPIVGSKYPGGLPEAALVVKDVLRTVKKPVHLLDITTLSQLRKDAHPSSFNGFKAMDCTHWCVAGLPDTWN 362 (373)
Q Consensus 283 ~~g~C~~~t~P~~~~~~~~~~~~~~~~v~~v~~~~~~~v~lLDIt~ls~~R~DaHp~~y~~~~~~DC~HWClPGv~D~WN 362 (373)
+ .. .. .........+++++++.++. .+.++|++..+.-+++.. ...|-+|.---| ...|-
T Consensus 128 --~-----~~-~~--~~~~~~~~~n~~~~~~a~~~--~v~~iD~~~~~~~~~~~~-------~~~Dg~Hpn~~G-y~~~A 187 (200)
T 4h08_A 128 --M-----KE-FA--PITERLNVRNQIALKHINRA--SIEVNDLWKVVIDHPEYY-------AGGDGTHPIDAG-YSALA 187 (200)
T ss_dssp --G-----CE-EC--THHHHHHHHHHHHHHHHHHT--TCEEECHHHHHTTCGGGT-------TTSCSSSCCHHH-HHHHH
T ss_pred --c-----cc-cc--hhHHHHHHHHHHHHHHhhhc--ceEEEecHHhHhcCHHHh-------cCCCCCCCCHHH-HHHHH
Confidence 0 00 00 00001123466777776664 489999987665433321 236888876544 34555
Q ss_pred HHHHHHHh
Q 017346 363 QLLYTALV 370 (373)
Q Consensus 363 ~lL~~~L~ 370 (373)
+.++..|.
T Consensus 188 ~~i~~~i~ 195 (200)
T 4h08_A 188 NQVIKVIK 195 (200)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 373 | |||
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 96.69 | |
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 96.4 | |
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 82.77 |
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: YxiM C-terminal domain-like domain: Hypothetical protein YxiM species: Bacillus subtilis [TaxId: 1423]
Probab=96.69 E-value=0.00089 Score=56.90 Aligned_cols=130 Identities=15% Similarity=0.117 Sum_probs=64.7
Q ss_pred ccccEEEEecccccccCCCCCCcceeccCceecccCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEeecCCCCCCCCCCC
Q 017346 201 KNIDVLVFNTWLWWYRRGPKQPWDYVEFDNKILKDMDRMDAFRQGLKTWAKWVDSDVDTTKTTVIFQGVSPSHYNGTEWD 280 (373)
Q Consensus 201 ~~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~~~~~VffRt~sP~Hf~~g~W~ 280 (373)
+..|+||+..|.- +....+. ...+.|+..++++++-+.+ ....+++-+..| ++..
T Consensus 70 ~~~D~vvi~~G~N----------D~~~~~~------~~~~~~~~~l~~li~~~~~----~~~~~vl~~~~~-~~~~---- 124 (208)
T d2o14a2 70 KPGDYFMLQLGIN----------DTNPKHK------ESEAEFKEVMRDMIRQVKA----KGADVILSTPQG-RATD---- 124 (208)
T ss_dssp CTTCEEEEECCTG----------GGCGGGC------CCHHHHHHHHHHHHHHHHT----TTCEEEEECCCC-CTTC----
T ss_pred CCCCEEEEEcCCC----------ccccccc------ccHHHHHHHHHHHHHHHHh----cCCceeeccccc-cccc----
Confidence 3469999998843 1111111 2346788888888887654 234455544333 2110
Q ss_pred CCCCCCCCCCCccCCCCCCCCCChHHHHHHHHHHhhcCCCeEEecccccccccccCC-----CCCCCCCCCCCccccccC
Q 017346 281 EPEVTNCANEKQPIVGSKYPGGLPEAALVVKDVLRTVKKPVHLLDITTLSQLRKDAH-----PSSFNGFKAMDCTHWCVA 355 (373)
Q Consensus 281 ~g~~g~C~~~t~P~~~~~~~~~~~~~~~~v~~v~~~~~~~v~lLDIt~ls~~R~DaH-----p~~y~~~~~~DC~HWClP 355 (373)
........+. ....+.+++++.++.+ +.++|++.++....+.. ...| ...|-+|.=--
T Consensus 125 ----~~~~~~~~~~--------~~~~~~~~~~~a~~~~--v~~vD~~~~~~~~~~~~~~~~~~~~~---~~~DgvHpn~~ 187 (208)
T d2o14a2 125 ----FTSEGIHSSV--------NRWYRASILALAEEEK--TYLIDLNVLSSAYFTSIGPERTLGLY---MDGDTLHPNRA 187 (208)
T ss_dssp ----BCTTSCBCCT--------TSTTHHHHHHHHHHTT--CEEECHHHHHHHHHHHHCHHHHHTTB---CTTCSSSBBHH
T ss_pred ----cccccchHHH--------HHHHHHHHHHhhccCC--cEEeccHHHHHHHHHHhCcccccccc---CCCCCCCCCHH
Confidence 0010011111 1123567777776654 88999988764221111 1111 12466665333
Q ss_pred CchHHHHHHHHHHHhhCC
Q 017346 356 GLPDTWNQLLYTALVNNG 373 (373)
Q Consensus 356 Gv~D~WN~lL~~~L~~~~ 373 (373)
| -...-++++..|.+.|
T Consensus 188 G-~~~~A~~i~~~lk~~g 204 (208)
T d2o14a2 188 G-ADALARLAVQELKRQG 204 (208)
T ss_dssp H-HHHHHHHHHHHHHHTT
T ss_pred H-HHHHHHHHHHHHHhcc
Confidence 3 3555566666665544
|
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|