Citrus Sinensis ID: 017376

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370--
MAANSTSETQATMELNHYDRESELKAFDNTKAGVKGLVDAGIDRIPRIFYLPTDCLDKTPVPRDVQYIFPTVDLQGVDKDPIQRKEIVERVRKASETSGFFQVINHGIPVSILEELKEGVRRFFEQDFELKKEFYTRDITKMVGYNSNFDLYSAPAANWRDTILFNMAPNPPKPEEMPAACRDIVMEYTKSVMKLGPLLFELLSEALGLNPNYLKGMDCAEGLLLLGHYYPACPQPELTMGATEHADDDFVTVLLQDHIGGLQVCYQNHWIDVPPSPGALVINIGDLLQLISNDKFISAEHRVLANRVGPRISVASFFSPKRQPSSKLYGPIKELLSEENPPKYRETTVRDFVLHLHKKGLDGTSALEHFKL
cccccccccccccccccccHHHHHHHcccccccHHHHHHcccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHcccccccEEEEcccccccccccccEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccccccEEEEEEEccccccccccccccccccccccEEEEccccccEEEEEccEEEEcccccccEEEEccccHHHHHcccccccccEEEEcccccEEEEEEEEcccccccccEEEccccccccccccccccccHHHHHHHHHHcccccccccccccc
cccccccccccccccccccHHHHHHHcccccHcHHHHHHccccccccHEEccccccccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHccccccEEEEEccccEcccccccHHHHEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccEEEEEEEcccccccccccEEEEcccccEEEEEEcccccEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEccccccccccccHHHHcccccccccccccHHHHHHHHHHccccccccccHccc
MAANSTSETQATMELNHydreselkafdntkaGVKGLVdagidriprifylptdcldktpvprdvqyifptvdlqgvdkdpiqRKEIVERVRKASETSGFFQVINHGIPVSILEELKEGVRRFFEQDFELKKEFYTRDITKMVGYnsnfdlysapaanwrdtilfnmapnppkpeempaaCRDIVMEYTKSVMKLGPLLFELLSEalglnpnylkgmdcAEGLLLlghyypacpqpeltmgatehaddDFVTVLLQDHIGGLqvcyqnhwidvppspgalvINIGDLLQLISNDKFISAEHRVLANrvgprisvasffspkrqpssklygpikellseenppkyrettVRDFVLHLHKkgldgtsalehfkl
maanstsetqatMELNHYDRESELKAFDNTKAGVKGLVDAGIDRIPRIFYLptdcldktpvPRDVQYIfptvdlqgvdkdpiQRKEIVERVRkasetsgffqvinhgipVSILEELKEGVRRFFEQDFELKKEFYTRDITKMVGYNSNFDLYSAPAANWRDTILFNMAPNPPKPEEMPAACRDIVMEYTKSVMKLGPLLFELLSEALGLNPNYLKGMDCAEGLLLLGHYYPACPQPELTMGATEHADDDFVTVLLQDHIGGLQVCYQNHWIDVPPSPGALVINIGDLLQLISNDKFISAEHRVLANrvgprisvasffspkrqpssklygpikellseenppkyreTTVRDFVLHLHKkgldgtsalehfkl
MAANSTSETQATMELNHYDRESELKAFDNTKAGVKGLVDAGIDRIPRIFYLPTDCLDKTPVPRDVQYIFPTVDLQGVDKDPIQRKEIVERVRKASETSGFFQVINHGIPVSILEELKEGVRRFFEQDFELKKEFYTRDITKMVGYNSNFDLYSAPAANWRDTILFNMAPNPPKPEEMPAACRDIVMEYTKSVMKlgpllfellsealglNPNYLKGMDCAEGLLLLGHYYPACPQPELTMGATEHADDDFVTVLLQDHIGGLQVCYQNHWIDVPPSPGALVINIGDLLQLISNDKFISAEHRVLANRVGPRISVASFFSPKRQPSSKLYGPIKELLSEENPPKYRETTVRDFVLHLHKKGLDGTSALEHFKL
**************************FDNTKAGVKGLVDAGIDRIPRIFYLPTDCLDKTPVPRDVQYIFPTVDLQGVDKDPIQRKEIVERVRKASETSGFFQVINHGIPVSILEELKEGVRRFFEQDFELKKEFYTRDITKMVGYNSNFDLYSAPAANWRDTILFNM***********AACRDIVMEYTKSVMKLGPLLFELLSEALGLNPNYLKGMDCAEGLLLLGHYYPACPQPELTMGATEHADDDFVTVLLQDHIGGLQVCYQNHWIDVPPSPGALVINIGDLLQLISNDKFISAEHRVLANRVGPRISVASFF*****************************TVRDFVLHLHK**************
************************KAFDNTKAGVKGLVDAGIDRIPRIFYLPT*************YIFPTVDLQGVDKDPIQRKEIVERVRKASETSGFFQVINHGIPVSILEELKEGVRRFFEQDFELKKE*******KMVGYNSNFDLYSAPAANWRDTILFNMAPNPPKPEEMPAACRDIVMEYTKSVMKLGPLLFELLSEALGLNPNYLKGMDCAEGLLLLGHYYPACPQPELTMGATEHADDDFVTVLLQDHIGGLQVCYQNHWIDVPPSPGALVINIGDLLQLISNDKFISAEHRVLANRVGPRISVASFFSPKRQPSSKLYGPIKELLSEENPPKYRETTVRDFVLHLHKKGLDGTSALEHFKL
**********ATMELNHYDRESELKAFDNTKAGVKGLVDAGIDRIPRIFYLPTDCLDKTPVPRDVQYIFPTVDLQGVDKDPIQRKEIVERVRKASETSGFFQVINHGIPVSILEELKEGVRRFFEQDFELKKEFYTRDITKMVGYNSNFDLYSAPAANWRDTILFNMAPNPPKPEEMPAACRDIVMEYTKSVMKLGPLLFELLSEALGLNPNYLKGMDCAEGLLLLGHYYPACPQPELTMGATEHADDDFVTVLLQDHIGGLQVCYQNHWIDVPPSPGALVINIGDLLQLISNDKFISAEHRVLANRVGPRISVASFFSPKRQPSSKLYGPIKELLSEENPPKYRETTVRDFVLHLHKKGLDGTSALEHFKL
******************DRESELKAFDNTKAGVKGLVDAGIDRIPRIFYLPTDCLD*****RDVQYIFPTVDLQGVDKDPIQRKEIVERVRKASETSGFFQVINHGIPVSILEELKEGVRRFFEQDFELKKEFYTRDITKMVGYNSNFDLYSAPAANWRDTILFNMAPNPPKPEEMPAACRDIVMEYTKSVMKLGPLLFELLSEALGLNPNYLKGMDCAEGLLLLGHYYPACPQPELTMGATEHADDDFVTVLLQDHIGGLQVCYQNHWIDVPPSPGALVINIGDLLQLISNDKFISAEHRVLANRVGPRISVASFFSPKRQPSSKLYGPIKELLSEENPPKYRETTVRDFVLHLHKKGLDGTSALE****
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MAANSTSETQATMELNHYDRESELKAFDNTKAGVKGLVDAGIDRIPRIFYLPTDCLDKTPVPRDVQYIFPTVDLQGVDKDPIQRKEIVERVRKASETSGFFQVINHGIPVSILEELKEGVRRFFEQDFELKKEFYTRDITKMVGYNSNFDLYSAPAANWRDTILFNMAPNPPKPEEMPAACRDIVMEYTKSVMKLGPLLFELLSEALGLNPNYLKGMDCAEGLLLLGHYYPACPQPELTMGATEHADDDFVTVLLQDHIGGLQVCYQNHWIDVPPSPGALVINIGDLLQLISNDKFISAEHRVLANRVGPRISVASFFSPKRQPSSKLYGPIKELLSEENPPKYRETTVRDFVLHLHKKGLDGTSALEHFKL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query372 2.2.26 [Sep-21-2011]
Q84MB3365 1-aminocyclopropane-1-car yes no 0.951 0.969 0.598 1e-127
Q8H1S4369 1-aminocyclopropane-1-car no no 0.954 0.962 0.591 1e-125
Q9LTH8364 1-aminocyclopropane-1-car no no 0.948 0.969 0.596 1e-122
P93824360 1-aminocyclopropane-1-car no no 0.959 0.991 0.575 1e-120
Q9C5K7369 1-aminocyclopropane-1-car no no 0.954 0.962 0.577 1e-119
Q9LTH7366 1-aminocyclopropane-1-car no no 0.970 0.986 0.561 1e-117
P10967363 1-aminocyclopropane-1-car N/A no 0.927 0.950 0.587 1e-117
Q43383398 1-aminocyclopropane-1-car no no 0.991 0.927 0.547 1e-113
O04847401 Deacetoxyvindoline 4-hydr N/A no 0.940 0.872 0.570 1e-113
Q9SKK4359 Probable 2-oxoacid depend no no 0.951 0.986 0.541 1e-110
>sp|Q84MB3|ACCH1_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1 Back     alignment and function desciption
 Score =  456 bits (1173), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 212/354 (59%), Positives = 268/354 (75%)

Query: 19  DRESELKAFDNTKAGVKGLVDAGIDRIPRIFYLPTDCLDKTPVPRDVQYIFPTVDLQGVD 78
           DR + LKAFD TK GVKGL+DAGI  IP IF  P   L     P    +  PT+DL+G  
Sbjct: 12  DRSTLLKAFDETKTGVKGLIDAGITEIPSIFRAPPATLTSPKPPSSSDFSIPTIDLKGGG 71

Query: 79  KDPIQRKEIVERVRKASETSGFFQVINHGIPVSILEELKEGVRRFFEQDFELKKEFYTRD 138
            D I R+ +VE++  A+E  GFFQVINHGIP+ +LE++ +G+R F EQD E+KK FY+RD
Sbjct: 72  TDSITRRSLVEKIGDAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGFYSRD 131

Query: 139 ITKMVGYNSNFDLYSAPAANWRDTILFNMAPNPPKPEEMPAACRDIVMEYTKSVMKLGPL 198
               + Y+SNFDL+S+PAANWRDT+    AP+PP+PE++PA C ++++EY+K VMKLG L
Sbjct: 132 PASKMVYSSNFDLFSSPAANWRDTLGCYTAPDPPRPEDLPATCGEMMIEYSKEVMKLGKL 191

Query: 199 LFELLSEALGLNPNYLKGMDCAEGLLLLGHYYPACPQPELTMGATEHADDDFVTVLLQDH 258
           LFELLSEALGLN N+LK MDC   LLLLGHYYP CPQP+LT+G T+H+D+ F+T+LLQDH
Sbjct: 192 LFELLSEALGLNTNHLKDMDCTNSLLLLGHYYPPCPQPDLTLGLTKHSDNSFLTILLQDH 251

Query: 259 IGGLQVCYQNHWIDVPPSPGALVINIGDLLQLISNDKFISAEHRVLANRVGPRISVASFF 318
           IGGLQV +  +W+DVPP PGALV+N+GDLLQLI+NDKFIS EHRVLAN  GPRISVA FF
Sbjct: 252 IGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVAGPRISVACFF 311

Query: 319 SPKRQPSSKLYGPIKELLSEENPPKYRETTVRDFVLHLHKKGLDGTSALEHFKL 372
           S     + ++YGPIKE+LSEENPP YR+TT+ ++      KG DGTS L + K+
Sbjct: 312 SSYLMANPRVYGPIKEILSEENPPNYRDTTITEYAKFYRSKGFDGTSGLLYLKI 365

Arabidopsis thaliana (taxid: 3702)
>sp|Q8H1S4|ACCH3_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 3 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1 Back     alignment and function description
>sp|Q9LTH8|ACH11_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 11 OS=Arabidopsis thaliana GN=At5g59530 PE=2 SV=1 Back     alignment and function description
>sp|P93824|ACCH6_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 6 OS=Arabidopsis thaliana GN=At1g04350 PE=2 SV=1 Back     alignment and function description
>sp|Q9C5K7|ACCH2_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1 Back     alignment and function description
>sp|Q9LTH7|ACH12_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 12 OS=Arabidopsis thaliana GN=At5g59540 PE=2 SV=1 Back     alignment and function description
>sp|P10967|ACCH3_SOLLC 1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1 Back     alignment and function description
>sp|Q43383|ACCH5_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 5 OS=Arabidopsis thaliana GN=2A6 PE=2 SV=2 Back     alignment and function description
>sp|O04847|DV4H_CATRO Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2 Back     alignment and function description
>sp|Q9SKK4|GSL_ARATH Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query372
224111004366 predicted protein [Populus trichocarpa] 0.951 0.967 0.739 1e-154
255576836363 Desacetoxyvindoline 4-hydroxylase, putat 0.954 0.977 0.723 1e-150
255576838363 Desacetoxyvindoline 4-hydroxylase, putat 0.954 0.977 0.721 1e-149
225433009364 PREDICTED: 1-aminocyclopropane-1-carboxy 0.978 1.0 0.658 1e-146
225433017365 PREDICTED: 1-aminocyclopropane-1-carboxy 0.940 0.958 0.703 1e-145
225433023363 PREDICTED: 1-aminocyclopropane-1-carboxy 0.967 0.991 0.678 1e-145
359477716 673 PREDICTED: 1-aminocyclopropane-1-carboxy 0.943 0.521 0.696 1e-143
147818396367 hypothetical protein VITISV_000986 [Viti 0.986 1.0 0.666 1e-142
359477713362 PREDICTED: LOW QUALITY PROTEIN: 1-aminoc 0.973 1.0 0.653 1e-140
224111006379 predicted protein [Populus trichocarpa] 0.994 0.976 0.640 1e-139
>gi|224111004|ref|XP_002315712.1| predicted protein [Populus trichocarpa] gi|222864752|gb|EEF01883.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 264/357 (73%), Positives = 308/357 (86%), Gaps = 3/357 (0%)

Query: 19  DRESELKAFDNTKAGVKGLVDAGIDRIPRIFYLPTDCLDKT-PVPRDVQYIFPTVDLQGV 77
           DR SELKAFD TKAGVKGLVDAGI ++P IF+ P D LDKT  V  D ++ FP +DL+GV
Sbjct: 10  DRTSELKAFDETKAGVKGLVDAGITKVPWIFHHPPDDLDKTLIVATDGKFRFPIIDLEGV 69

Query: 78  DKDPIQRKEIVERVRKASETSGFFQVINHGIPVSILEELKEGVRRFFEQDFELKKEFYTR 137
            KDP QRKEIVERVR ASET GFF+V+NHGIPVS+LEE+K+GV RF+EQD ELKKE+++R
Sbjct: 70  RKDPFQRKEIVERVRDASETWGFFEVVNHGIPVSVLEEMKDGVCRFYEQDVELKKEYFSR 129

Query: 138 DITKMVGYNSNFDLYSAPAANWRDTILFNMAPNPPKPEEMPAACRDIVMEYTKSVMKLGP 197
           D T+ V YNSNFDLY+A + NWRDT+ + MAP PP PEE+PAACRDI++EYTK VMKLG 
Sbjct: 130 DYTRKVIYNSNFDLYTASSTNWRDTVSYIMAPGPPMPEELPAACRDILIEYTKEVMKLGN 189

Query: 198 LLFELLSEALGLNPNYLKGMDCAEGLLLLGHYYPACPQPELTMGATEHADDDFVTVLLQD 257
            LFELLSEALGLNPN+LK +DC++GL +LGHYYPACPQPELT+G T+H+D+DF+TVLLQD
Sbjct: 190 SLFELLSEALGLNPNHLKDIDCSKGLTILGHYYPACPQPELTLGTTKHSDNDFLTVLLQD 249

Query: 258 HIGGLQVCYQNHWIDVPPSPGALVINIGDLLQ--LISNDKFISAEHRVLANRVGPRISVA 315
           HIGGLQV YQNHW+DVPP+PGAL+INIGDLLQ  LISNDKFIS EHRVLANR+GPR+SVA
Sbjct: 250 HIGGLQVMYQNHWVDVPPTPGALLINIGDLLQATLISNDKFISVEHRVLANRIGPRVSVA 309

Query: 316 SFFSPKRQPSSKLYGPIKELLSEENPPKYRETTVRDFVLHLHKKGLDGTSALEHFKL 372
           SFFS    P+S+ YGPIKELLSEE+PPKYRETTVRD+V +   KGLDGTSAL HFKL
Sbjct: 310 SFFSTNLNPNSRPYGPIKELLSEESPPKYRETTVRDYVAYFIHKGLDGTSALLHFKL 366

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255576836|ref|XP_002529304.1| Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis] gi|223531228|gb|EEF33073.1| Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255576838|ref|XP_002529305.1| Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis] gi|223531229|gb|EEF33074.1| Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225433009|ref|XP_002284582.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225433017|ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Vitis vinifera] gi|147807864|emb|CAN66433.1| hypothetical protein VITISV_027452 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225433023|ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359477716|ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 3 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147818396|emb|CAN62402.1| hypothetical protein VITISV_000986 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359477713|ref|XP_003632011.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224111006|ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|222864753|gb|EEF01884.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query372
TAIR|locus:2009130365 AT1G06620 [Arabidopsis thalian 0.948 0.967 0.566 1.3e-109
TAIR|locus:2009175369 AT1G06650 [Arabidopsis thalian 0.954 0.962 0.555 2.4e-108
TAIR|locus:2148403364 AT5G59530 [Arabidopsis thalian 0.948 0.969 0.557 7.5e-105
TAIR|locus:2009210369 AT1G06640 [Arabidopsis thalian 0.954 0.962 0.541 6.7e-104
TAIR|locus:2052781358 AT2G30830 [Arabidopsis thalian 0.948 0.986 0.541 2.3e-103
TAIR|locus:2052796362 AT2G30840 [Arabidopsis thalian 0.951 0.977 0.537 4.7e-103
TAIR|locus:2018349360 AT1G04350 [Arabidopsis thalian 0.959 0.991 0.537 1.3e-102
TAIR|locus:2824199366 AT1G06645 [Arabidopsis thalian 0.946 0.961 0.530 3e-101
TAIR|locus:2148303366 AT5G59540 [Arabidopsis thalian 0.954 0.969 0.533 1.3e-100
TAIR|locus:2020798398 2A6 [Arabidopsis thaliana (tax 0.991 0.927 0.513 9.4e-98
TAIR|locus:2009130 AT1G06620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1083 (386.3 bits), Expect = 1.3e-109, P = 1.3e-109
 Identities = 201/355 (56%), Positives = 257/355 (72%)

Query:    19 DRESELKAFDNTKAGVKGLVDAGIDRIPRIFYLPTDCLDKTPVPRDVQYIFPTVDLQGVD 78
             DR + LKAFD TK GVKGL+DAGI  IP IF  P   L     P    +  PT+DL+G  
Sbjct:    12 DRSTLLKAFDETKTGVKGLIDAGITEIPSIFRAPPATLTSPKPPSSSDFSIPTIDLKGGG 71

Query:    79 KDPIQRKEIVERVRKASETSGFFQVINHGIPVSILEELKEGVRRFFEQDFELKKEFYTRD 138
              D I R+ +VE++  A+E  GFFQVINHGIP+ +LE++ +G+R F EQD E+KK FY+RD
Sbjct:    72 TDSITRRSLVEKIGDAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGFYSRD 131

Query:   139 -ITKMVGYNSNFDLYSAPAANWRDTILFNMAPNPPKPEEMPAACRDIVMEYTKSVMKXXX 197
               +KMV Y+SNFDL+S+PAANWRDT+    AP+PP+PE++PA C ++++EY+K VMK   
Sbjct:   132 PASKMV-YSSNFDLFSSPAANWRDTLGCYTAPDPPRPEDLPATCGEMMIEYSKEVMKLGK 190

Query:   198 XXXXXXXXXXXXNPNYLKGMDCAEGLLLLGHYYPACPQPELTMGATEHADDDFVTVLLQD 257
                         N N+LK MDC   LLLLGHYYP CPQP+LT+G T+H+D+ F+T+LLQD
Sbjct:   191 LLFELLSEALGLNTNHLKDMDCTNSLLLLGHYYPPCPQPDLTLGLTKHSDNSFLTILLQD 250

Query:   258 HIGGLQVCYQNHWIDVPPSPGALVINIGDLLQLISNDKFISAEHRVLANRVGPRISVASF 317
             HIGGLQV +  +W+DVPP PGALV+N+GDLLQLI+NDKFIS EHRVLAN  GPRISVA F
Sbjct:   251 HIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVAGPRISVACF 310

Query:   318 FSPKRQPSSKLYGPIKELLSEENPPKYRETTVRDFVLHLHKKGLDGTSALEHFKL 372
             FS     + ++YGPIKE+LSEENPP YR+TT+ ++      KG DGTS L + K+
Sbjct:   311 FSSYLMANPRVYGPIKEILSEENPPNYRDTTITEYAKFYRSKGFDGTSGLLYLKI 365
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009414 "response to water deprivation" evidence=RCA
GO:0009611 "response to wounding" evidence=RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA
GO:0042538 "hyperosmotic salinity response" evidence=RCA
TAIR|locus:2009175 AT1G06650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148403 AT5G59530 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009210 AT1G06640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2052781 AT2G30830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2052796 AT2G30840 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018349 AT1G04350 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2824199 AT1G06645 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148303 AT5G59540 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020798 2A6 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q84MB3ACCH1_ARATHNo assigned EC number0.59880.95160.9698yesno
O04847DV4H_CATRO1, ., 1, 4, ., 1, 1, ., 2, 00.57020.94080.8728N/Ano
P10967ACCH3_SOLLCNo assigned EC number0.58790.92740.9504N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!
4th Layer1.14.11.9LOW CONFIDENCE prediction!
3rd Layer1.14.11.13LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query372
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 1e-70
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 3e-65
PLN02947374 PLN02947, PLN02947, oxidoreductase 3e-63
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 2e-56
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 7e-55
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 2e-53
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 6e-53
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 6e-52
PLN02704335 PLN02704, PLN02704, flavonol synthase 3e-51
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 1e-49
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 9e-45
PLN02904357 PLN02904, PLN02904, oxidoreductase 6e-44
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 3e-43
PLN02216357 PLN02216, PLN02216, protein SRG1 3e-42
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 2e-40
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 8e-39
PLN02997325 PLN02997, PLN02997, flavonol synthase 4e-37
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 1e-36
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 6e-33
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 1e-32
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 7e-32
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 4e-30
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 3e-27
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 3e-24
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 4e-20
PLN02485329 PLN02485, PLN02485, oxidoreductase 1e-19
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 9e-16
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 3e-05
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information 
 Score =  224 bits (574), Expect = 1e-70
 Identities = 115/352 (32%), Positives = 182/352 (51%), Gaps = 19/352 (5%)

Query: 34  VKGLVDAGIDRIPRIFYLPT----DCLDKTPVPRDVQYIFPTVDLQGV-DKDPIQRKEIV 88
           V+ L ++G+  IP  +  P     +  + T  P ++    P +DL  +   D   R   +
Sbjct: 15  VQSLSESGLPTIPDRYVKPPSQRPNSSNTTSAPAEIN--IPVIDLSSLFSDDARLRDATL 72

Query: 89  ERVRKASETSGFFQVINHGIPVSILEELKEGVRRFFEQDFELKKEFYTRDITKMVGYNSN 148
             + +A    GFFQV+NHG+   +++  +E  R FF    E+K+  Y        GY S 
Sbjct: 73  RAISEACREWGFFQVVNHGVRPELMDRAREAWREFFHLPLEVKQR-YANSPATYEGYGSR 131

Query: 149 FDLYSAPAANWRDTILFNMAP----NPPKPEEMPAACRDIVMEYTKSVMKLGPLLFELLS 204
             +      +W D    +  P    +P K   +P +CR+++ EY + V+KL   L ++LS
Sbjct: 132 LGVEKGAILDWSDYYFLHYLPSSLKDPNKWPSLPPSCRELIEEYGEEVVKLCGRLMKVLS 191

Query: 205 EALGLNPNYLK---GMDCAEGLLLLGHYYPACPQPELTMGATEHADDDFVTVLLQD-HIG 260
             LGL  + L+   G +   G  L  +YYP CPQP+LT+G + H+D   +T+LL D ++ 
Sbjct: 192 VNLGLEEDRLQNAFGGEDGVGACLRVNYYPKCPQPDLTLGLSPHSDPGGMTILLPDDNVA 251

Query: 261 GLQVCYQNHWIDVPPSPGALVINIGDLLQLISNDKFISAEHRVLANRVGPRISVASFFSP 320
           GLQV   + WI V P P A ++NIGD +Q++SN  + S EHRV+ N    R+S+A F++P
Sbjct: 252 GLQVRRDDAWITVKPVPDAFIVNIGDQIQVLSNAIYKSVEHRVIVNSAKERVSLAFFYNP 311

Query: 321 KRQPSSKLYGPIKELLSEENPPKYRETTVRDFVLHLHKKGLDGTSALEHFKL 372
           K   S     P+KEL++ + P  Y   T  ++ L +  KG  G S +E  K 
Sbjct: 312 K---SDLPIEPLKELVTPDRPALYPPMTFDEYRLFIRTKGPRGKSQVESLKS 360

Length = 362
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 372
PLN02947374 oxidoreductase 100.0
PLN02904357 oxidoreductase 100.0
PLN02216357 protein SRG1 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02276361 gibberellin 20-oxidase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02704335 flavonol synthase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02997325 flavonol synthase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02485329 oxidoreductase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.92
PLN03176120 flavanone-3-hydroxylase; Provisional 99.89
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.88
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.24
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 94.43
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 93.03
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 84.73
TIGR02466201 conserved hypothetical protein. This family consis 83.24
PF13532194 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; 80.59
>PLN02947 oxidoreductase Back     alignment and domain information 
Probab=100.00  E-value=5.6e-85  Score=637.46  Aligned_cols=336  Identities=34%  Similarity=0.573  Sum_probs=294.4

Q ss_pred             ccchHHHHhCCCCCCCCcccCCCCCCCCCCC-C---CCCCCCcceEeCCCCCCChhHHHHHHHHHHHHHhhcCeEEEecC
Q 017376           31 KAGVKGLVDAGIDRIPRIFYLPTDCLDKTPV-P---RDVQYIFPTVDLQGVDKDPIQRKEIVERVRKASETSGFFQVINH  106 (372)
Q Consensus        31 ~~~v~~l~~~~~~~vP~~y~~~~~~~~~~~~-~---~~~~~~IPvIDls~l~~~~~~~~~~~~~l~~A~~~~GFF~l~nH  106 (372)
                      ..+||.|++.|+.+||++||+|++++|.... .   +....+||||||+.+.+  ..+..++++|++||++||||||+||
T Consensus        25 ~~~v~~l~~~~~~~vp~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~--~~~~~~~~~l~~Ac~~~GFF~v~nH  102 (374)
T PLN02947         25 QKGVKHLCDSGITKVPAKYILPASDRPGLTRDEAIAASGNLKLPVIDLAELRG--SNRPHVLATLAAACREYGFFQVVNH  102 (374)
T ss_pred             ecCHHHHHhcCCCcCCHHhcCCchhccccccccccccCCCCCCCeEECcccCC--ccHHHHHHHHHHHHHHCcEEEEEcC
Confidence            5689999999999999999999988875311 0   01345899999998852  2467789999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHhhcCCHHHHhhhhccCCCCccccccCcccCCCCCCCcccccccccCCCC----CCCCCCchhhH
Q 017376          107 GIPVSILEELKEGVRRFFEQDFELKKEFYTRDITKMVGYNSNFDLYSAPAANWRDTILFNMAPNP----PKPEEMPAACR  182 (372)
Q Consensus       107 GI~~~l~~~~~~~~~~FF~LP~EeK~~~~~~~~~~~~gy~~~~~~~~~~~~d~~e~~~~~~~p~~----~~~~~~P~~fr  182 (372)
                      |||.++++++++.+++||+||.|+|+++...+.....||+..+....+...+|+|.+.+...|..    .||+ .|+.||
T Consensus       103 GIp~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~gyg~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~WP~-~~~~fr  181 (374)
T PLN02947        103 GVPSEVIGGMIDVARRFFELPLEERAKYMSADMRAPVRYGTSFNQNKDAVFCWRDFLKLVCHPLSDVLPHWPS-SPADLR  181 (374)
T ss_pred             CCCHHHHHHHHHHHHHHhcCCHHHHhhhhcccCCCCeeeccccccccccccCceeceeeecCCcccccccCcc-chHHHH
Confidence            99999999999999999999999999976544334467766554445566899999887666632    2443 246899


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHcCCC---hhhhcccccCcCceeeecccCCCCCcccCCCCCCccCCCceEEEeeCCC
Q 017376          183 DIVMEYTKSVMKLGPLLFELLSEALGLN---PNYLKGMDCAEGLLLLGHYYPACPQPELTMGATEHADDDFVTVLLQDHI  259 (372)
Q Consensus       183 ~~~~~y~~~~~~la~~ll~~la~~Lgl~---~~~~~~~~~~~~~~~~~~yYP~~~~~~~~~g~~~HtD~~~lTlL~qd~~  259 (372)
                      +++++|+++|.+|+.+||++|+++||++   .++|.+......+.+|+|||||||+|+.++|+++|||+|+||||+||++
T Consensus       182 ~~~~~Y~~~~~~L~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrln~YPp~p~~~~~~G~~~HTD~g~lTlL~Qd~v  261 (374)
T PLN02947        182 KVAATYAKATKRLFLELMEAILESLGIVKRGSDELLEEFEAGSQMMVVNCYPACPEPELTLGMPPHSDYGFLTLLLQDEV  261 (374)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCCCccchHHHHHHhcCcceeeeeecCCCCCCcccccCCCCccCCCceEEEEecCC
Confidence            9999999999999999999999999997   4466655555567899999999999999999999999999999999999


Q ss_pred             CCceeeeCCcEEecCCCCCceEEechhHHHHhhcCeeccccccccCCCCCCeEEEEeeecCCCCCCCcEEecCccccCCC
Q 017376          260 GGLQVCYQNHWIDVPPSPGALVINIGDLLQLISNDKFISAEHRVLANRVGPRISVASFFSPKRQPSSKLYGPIKELLSEE  339 (372)
Q Consensus       260 ~GLqV~~~g~W~~V~p~pg~lvVniGD~Le~lSnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~~~~i~Pl~~~~~~~  339 (372)
                      +||||+++|+|++|+|+||+|||||||+||+||||+|||++|||++++.++||||+||+.|+.   |++|+|+++|++++
T Consensus       262 ~GLQV~~~g~Wi~V~p~pga~VVNvGD~Lq~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~---d~~i~Pl~~lv~~~  338 (374)
T PLN02947        262 EGLQIMHAGRWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVLHRVRVNSTKPRISVASLHSLPF---ERVVGPAPELVDEQ  338 (374)
T ss_pred             CCeeEeECCEEEeCCCCCCeEEEEeCceeeeeeCCEEeccccccccCCCCCEEEEEEEecCCC---CCEEeCChHhcCCC
Confidence            999999999999999999999999999999999999999999999998889999999999997   89999999999999


Q ss_pred             CCCCCCCccHHHHHHHHHHcCCCCCCcccccCC
Q 017376          340 NPPKYRETTVRDFVLHLHKKGLDGTSALEHFKL  372 (372)
Q Consensus       340 ~p~~y~~~~~~ey~~~~~~~~~~~~~~l~~~~~  372 (372)
                      +|++|++++|+||++.++++...++..++.+|+
T Consensus       339 ~p~~Y~~~~~~ey~~~~~~~~~~~~~~l~~~~~  371 (374)
T PLN02947        339 NPRRYMDTDFATFLAYLASAEGKHKNFLESRKL  371 (374)
T ss_pred             CCCcCCCCCHHHHHHHHHHhccCchhhhhhhhc
Confidence            999999999999999999999999999998885

>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query372
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 3e-33
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 3e-33
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 4e-32
1w9y_A319 The Structure Of Acc Oxidase Length = 319 1e-25
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 1e-10
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 7e-09
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  139 bits (350), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 166/352 (47%), Gaps = 43/352 (12%)
Query: 34  VKGLVDAGIDRIPRIFYLPTDCLDKTPVPRDVQYIF-----------PTVDLQGVDKDPI 82
           V+ L  +GI  IP+ +  P + L+       +  +F           PT+DL+ ++ D  
Sbjct: 7   VESLAKSGIISIPKEYIRPKEELE------SINDVFLEEKKEDGPQVPTIDLKNIESDDE 60
Query: 83  Q-RKEIVERVRKASETSGFFQVINHGIPVSILEELKEGVRRFFEQDFELKKEFYTRDIT- 140
           + R+  +E ++KAS   G   +INHGIP  ++E +K+    FF    E K+++     T 
Sbjct: 61  KIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATG 120
Query: 141 KMVGYNSNFDLYSAPAANWRDTILFNMAPNPPKPEE---------MPAACRDIVMEYTKS 191
           K+ GY S     ++    W D   F++A     PEE          P+   +   EY K 
Sbjct: 121 KIQGYGSKLANNASGQLEWED-YFFHLA----YPEEKRDLSIWPKTPSDYIEATSEYAKC 175
Query: 192 VMKXXXXXXXXXXXXXXXNPNYL-KGMDCAEGLLLLG--HYYPACPQPELTMGATEHADD 248
           +                  P+ L K +   E LLL    +YYP CPQPEL +G   H D 
Sbjct: 176 LRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDV 235
Query: 249 DFVTVLLQDHIGGLQVCYQNHWIDVPPSPGALVINIGDLLQLISNDKFISAEHRVLANRV 308
             +T +L + + GLQ+ Y+  W+     P ++V++IGD L+++SN K+ S  HR L N+ 
Sbjct: 236 SALTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKE 295
Query: 309 GPRISVASFFSPKRQPSSKL-YGPIKELLSEENPPKYRETTVRDFVLHLHKK 359
             RIS A F  P   P  K+   P+ E++S E+P K+     R F  H+  K
Sbjct: 296 KVRISWAVFCEP---PKDKIVLKPLPEMVSVESPAKF---PPRTFAQHIEHK 341
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query372
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-143
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-129
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 6e-74
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 1e-73
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 8e-67
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 9e-64
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  408 bits (1052), Expect = e-143
 Identities = 106/353 (30%), Positives = 167/353 (47%), Gaps = 20/353 (5%)

Query: 34  VKGLVDAGIDRIPRIFYLPTDCLDKTPVPRDVQYI-----FPTVDLQGVDK-DPIQRKEI 87
           V+ L  +GI  IP+ +  P + L+        +        PT+DL+ ++  D   R+  
Sbjct: 7   VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENC 66

Query: 88  VERVRKASETSGFFQVINHGIPVSILEELKEGVRRFFEQDFELKKEFYTRDIT-KMVGYN 146
           +E ++KAS   G   +INHGIP  ++E +K+    FF    E K+++     T K+ GY 
Sbjct: 67  IEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYG 126

Query: 147 SNFDLYSAPAANWRDTILFNMAPNPPKPE----EMPAACRDIVMEYTKSVMKLGPLLFEL 202
           S     ++    W D       P   +      + P+   +   EY K +  L   +F+ 
Sbjct: 127 SKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKA 186

Query: 203 LSEALGLNPNYL-KGMDCAEGLLLLG--HYYPACPQPELTMGATEHADDDFVTVLLQDHI 259
           LS  LGL P+ L K +   E LLL    +YYP CPQPEL +G   H D   +T +L + +
Sbjct: 187 LSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMV 246

Query: 260 GGLQVCYQNHWIDVPPSPGALVINIGDLLQLISNDKFISAEHRVLANRVGPRISVASFFS 319
            GLQ+ Y+  W+     P ++V++IGD L+++SN K+ S  HR L N+   RIS A F  
Sbjct: 247 PGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCE 306

Query: 320 PKRQPSSKLYGPIKELLSEENPPKYRETTVRDFVLHLHKKGLDGTSALEHFKL 372
           P       +  P+ E++S E+P K+   T    +    +  L G    E    
Sbjct: 307 PP--KDKIVLKPLPEMVSVESPAKFPPRTFAQHI----EHKLFGKEQEELVSE 353
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query372
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 93.14
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 92.44
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 87.38
3s57_A204 Alpha-ketoglutarate-dependent dioxygenase ALKB HO; 80.79
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 80.71
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 80.33
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=2e-83  Score=624.97  Aligned_cols=332  Identities=30%  Similarity=0.515  Sum_probs=291.8

Q ss_pred             ccchHHHHhCCCCCCCCcccCCCCCCCCCCCC--CC---CCCCcceEeCCCCC-CChhHHHHHHHHHHHHHhhcCeEEEe
Q 017376           31 KAGVKGLVDAGIDRIPRIFYLPTDCLDKTPVP--RD---VQYIFPTVDLQGVD-KDPIQRKEIVERVRKASETSGFFQVI  104 (372)
Q Consensus        31 ~~~v~~l~~~~~~~vP~~y~~~~~~~~~~~~~--~~---~~~~IPvIDls~l~-~~~~~~~~~~~~l~~A~~~~GFF~l~  104 (372)
                      .++||+|+++|+.+||++|++|.++++.....  ..   ...+||||||+.+. +++..|.+++++|.+||++||||||+
T Consensus         4 ~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~   83 (356)
T 1gp6_A            4 VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   83 (356)
T ss_dssp             CCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             cccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEe
Confidence            46799999999999999999998777653210  00   12369999999986 46667888999999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHhhcCCHHHHhhhhccCC-CCccccccCcccCCCCCCCcccccccccCCC-----CCCCCCCc
Q 017376          105 NHGIPVSILEELKEGVRRFFEQDFELKKEFYTRDI-TKMVGYNSNFDLYSAPAANWRDTILFNMAPN-----PPKPEEMP  178 (372)
Q Consensus       105 nHGI~~~l~~~~~~~~~~FF~LP~EeK~~~~~~~~-~~~~gy~~~~~~~~~~~~d~~e~~~~~~~p~-----~~~~~~~P  178 (372)
                      ||||+.++++++++++++||+||.|+|+++..... ....||+........+..||+|.|.+...|.     ..||+. |
T Consensus        84 nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~-~  162 (356)
T 1gp6_A           84 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKT-P  162 (356)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCS-S
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCc-c
Confidence            99999999999999999999999999999865443 3567888766555567789999998876552     235543 4


Q ss_pred             hhhHHHHHHHHHHHHhHHHHHHHHHHHHcCCChhhhccccc---CcCceeeecccCCCCCcccCCCCCCccCCCceEEEe
Q 017376          179 AACRDIVMEYTKSVMKLGPLLFELLSEALGLNPNYLKGMDC---AEGLLLLGHYYPACPQPELTMGATEHADDDFVTVLL  255 (372)
Q Consensus       179 ~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~---~~~~~~~~~yYP~~~~~~~~~g~~~HtD~~~lTlL~  255 (372)
                      +.||+++++|+++|.+|+.+||++|+++||+++++|.+.+.   ...+.+|+||||||++++.++|+++|||+|+||||+
T Consensus       163 ~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~  242 (356)
T 1gp6_A          163 SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL  242 (356)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEE
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEE
Confidence            58999999999999999999999999999999999998765   356789999999999999999999999999999999


Q ss_pred             eCCCCCceeeeCCcEEecCCCCCceEEechhHHHHhhcCeeccccccccCCCCCCeEEEEeeecCCCCCCCc-EEecCcc
Q 017376          256 QDHIGGLQVCYQNHWIDVPPSPGALVINIGDLLQLISNDKFISAEHRVLANRVGPRISVASFFSPKRQPSSK-LYGPIKE  334 (372)
Q Consensus       256 qd~~~GLqV~~~g~W~~V~p~pg~lvVniGD~Le~lSnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~~~-~i~Pl~~  334 (372)
                      ||+++||||+++|+|++|+|+||+|||||||+||+||||+|||++|||++++.++||||+||++|+.   |+ +|+|+++
T Consensus       243 qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~---d~~~i~pl~~  319 (356)
T 1gp6_A          243 HNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPK---DKIVLKPLPE  319 (356)
T ss_dssp             ECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCT---TTCEECCCGG
T ss_pred             EcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCC---CCcEEeCChh
Confidence            9999999999999999999999999999999999999999999999999998899999999999997   78 9999999


Q ss_pred             ccCCCCCCCCCCccHHHHHHHHHHcCCCCCCc
Q 017376          335 LLSEENPPKYRETTVRDFVLHLHKKGLDGTSA  366 (372)
Q Consensus       335 ~~~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~  366 (372)
                      |+++++|++|+++||+||+..++.+++++|..
T Consensus       320 ~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~~  351 (356)
T 1gp6_A          320 MVSVESPAKFPPRTFAQHIEHKLFGKEQEELV  351 (356)
T ss_dssp             GCCSSSCCSSCCEEHHHHHHHHHHHHHHHHC-
T ss_pred             hcCCCCCccCCCccHHHHHHHHHHhccCcchh
Confidence            99999999999999999999988877766543
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A* Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 372
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 8e-68
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 1e-58
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 7e-50
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 8e-40
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  215 bits (548), Expect = 8e-68
 Identities = 99/346 (28%), Positives = 160/346 (46%), Gaps = 17/346 (4%)

Query: 32  AGVKGLVDAGIDRIPRIFYLPTDCLDK-----TPVPRDVQYIFPTVDLQGVDK-DPIQRK 85
             V+ L  +GI  IP+ +  P + L+          ++     PT+DL+ ++  D   R+
Sbjct: 4   ERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRE 63

Query: 86  EIVERVRKASETSGFFQVINHGIPVSILEELKEGVRRFFEQDFELKKEFYTRDITKMVG- 144
             +E ++KAS   G   +INHGIP  ++E +K+    FF    E K+++     T  +  
Sbjct: 64  NCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQG 123

Query: 145 YNSNFDLYSAPAANWRDTILFNMAP----NPPKPEEMPAACRDIVMEYTKSVMKLGPLLF 200
           Y S     ++    W D       P    +     + P+   +   EY K +  L   +F
Sbjct: 124 YGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVF 183

Query: 201 ELLSEALGLNPNYLKGMDCAEGLLLLGHYYP---ACPQPELTMGATEHADDDFVTVLLQD 257
           + LS  LGL P+ L+        LLL         CPQPEL +G   H D   +T +L +
Sbjct: 184 KALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN 243

Query: 258 HIGGLQVCYQNHWIDVPPSPGALVINIGDLLQLISNDKFISAEHRVLANRVGPRISVASF 317
            + GLQ+ Y+  W+     P ++V++IGD L+++SN K+ S  HR L N+   RIS A F
Sbjct: 244 MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVF 303

Query: 318 FSPKRQPSSKLYGPIKELLSEENPPKYRETTVRDFVLH-LHKKGLD 362
             P       +  P+ E++S E+P K+   T    + H L  K  +
Sbjct: 304 CEPP--KDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQE 347
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query372
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 89.49
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.6e-78  Score=587.59  Aligned_cols=325  Identities=31%  Similarity=0.531  Sum_probs=278.2

Q ss_pred             ccchHHHHhCCCCCCCCcccCCCCCCCCCCC-----CCCCCCCcceEeCCCCC-CChhHHHHHHHHHHHHHhhcCeEEEe
Q 017376           31 KAGVKGLVDAGIDRIPRIFYLPTDCLDKTPV-----PRDVQYIFPTVDLQGVD-KDPIQRKEIVERVRKASETSGFFQVI  104 (372)
Q Consensus        31 ~~~v~~l~~~~~~~vP~~y~~~~~~~~~~~~-----~~~~~~~IPvIDls~l~-~~~~~~~~~~~~l~~A~~~~GFF~l~  104 (372)
                      ...||+|+++|+.+||++||+|+..++....     .+.+..+||||||+.+. +++..|++++++|++||++||||||+
T Consensus         3 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~   82 (349)
T d1gp6a_           3 VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   82 (349)
T ss_dssp             CCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             CcchHHHHhCCCccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEE
Confidence            3479999999999999999999999887632     13456789999999997 67778899999999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHhhcCCHHHHhhhhccCCCCcc-ccccCcccCCCCCCCcccccccccCCC-----CCCCCCCc
Q 017376          105 NHGIPVSILEELKEGVRRFFEQDFELKKEFYTRDITKMV-GYNSNFDLYSAPAANWRDTILFNMAPN-----PPKPEEMP  178 (372)
Q Consensus       105 nHGI~~~l~~~~~~~~~~FF~LP~EeK~~~~~~~~~~~~-gy~~~~~~~~~~~~d~~e~~~~~~~p~-----~~~~~~~P  178 (372)
                      ||||+.++++++++++++||+||.|+|+++......... +|+...........+|.+.+.....+.     +.||+. +
T Consensus        83 nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~~-~  161 (349)
T d1gp6a_          83 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKT-P  161 (349)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCS-S
T ss_pred             ccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhcccccccccccccccccc-c
Confidence            999999999999999999999999999997543332222 344333334455567776654322221     234433 3


Q ss_pred             hhhHHHHHHHHHHHHhHHHHHHHHHHHHcCCChhhhcccc---cCcCceeeecccCCCCCcccCCCCCCccCCCceEEEe
Q 017376          179 AACRDIVMEYTKSVMKLGPLLFELLSEALGLNPNYLKGMD---CAEGLLLLGHYYPACPQPELTMGATEHADDDFVTVLL  255 (372)
Q Consensus       179 ~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~---~~~~~~~~~~yYP~~~~~~~~~g~~~HtD~~~lTlL~  255 (372)
                      +.|++.+++|+++|.+|+.+|+++++++||+++++|.+..   ......+|++|||+|+.++..+|+++|||+|+||||+
T Consensus       162 ~~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~  241 (349)
T d1gp6a_         162 SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL  241 (349)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEE
T ss_pred             chHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEEEe
Confidence            5799999999999999999999999999999999988654   2234578999999999999999999999999999999


Q ss_pred             eCCCCCceeeeCCcEEecCCCCCceEEechhHHHHhhcCeeccccccccCCCCCCeEEEEeeecCCCCCCCcEEecCccc
Q 017376          256 QDHIGGLQVCYQNHWIDVPPSPGALVINIGDLLQLISNDKFISAEHRVLANRVGPRISVASFFSPKRQPSSKLYGPIKEL  335 (372)
Q Consensus       256 qd~~~GLqV~~~g~W~~V~p~pg~lvVniGD~Le~lSnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~~~~i~Pl~~~  335 (372)
                      |+.++||||+.+|+|++|+|.+|++|||+||+||+||||+||||+|||+.+++++||||+||++|+.|  .++++|+++|
T Consensus       242 q~~~~GLqv~~~g~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d--~~i~~pl~~~  319 (349)
T d1gp6a_         242 HNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKD--KIVLKPLPEM  319 (349)
T ss_dssp             ECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTT--TCEECCCGGG
T ss_pred             ccCCcceeeecCCceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCc--ceeecCCHHH
Confidence            99999999999999999999999999999999999999999999999999988999999999999983  2456999999


Q ss_pred             cCCCCCCCCCCccHHHHHHHHHH
Q 017376          336 LSEENPPKYRETTVRDFVLHLHK  358 (372)
Q Consensus       336 ~~~~~p~~y~~~~~~ey~~~~~~  358 (372)
                      +++++|++|+++||+||++.++.
T Consensus       320 v~~~~p~~y~~~t~~e~~~~rl~  342 (349)
T d1gp6a_         320 VSVESPAKFPPRTFAQHIEHKLF  342 (349)
T ss_dssp             CCSSSCCSSCCEEHHHHHHHHHH
T ss_pred             cCCCCCCCCCCccHHHHHHHHHh
Confidence            99999999999999999998764
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure