Citrus Sinensis ID: 017426

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370--
Protein Sequence
MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL
Secondary Structure (PSIPRED)
ccccccccccccccccccEEEEEEEcccEEEEEEcccccccccEEEEEEEEEEEccHHccccccccccccccccEEccccccEEEEEEcccccccccccccccccccEEEEcccccccccHHccccccccccccEEEEccccccccccEEEEccccEEEcccccccccHHHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHccccEEEEEccccHHHHHHHHccccEEEEcccccccHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHHccccEEEEEccccccccccHHHHHccccEEEEEccccccHHHHHHHHHcccccccccEEEEEccccHHHHHHHHHHHcccccEEEEEEc
Secondary Structure Prediction (SSPRO)
cccccccccccccccHHcEEEEEEEccEEEEEEcccccccccEEEEEEEEEEEcHHHHHHHHHcEccccEccccEEcccEEEEEEEEEcccccccccccEEEEccEcEEEEccEEcccccHHHHcccHHHccccEEccEccEccccEcEEEEEHHHEEEccccccHHHHHcHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHcccccEEEEcccccccccccHHHHHccccEEEEcccccccHHHHHHHHHccccccHHHEEEEEEHHHHHHHHHHHHHHcccccEEEEEEc
Coil and Loop (DISEMBL)
mgkggmsqgekedgeEVNMAAWLLGVntlkiqpfelpslgpydVLVRMKAVGicgsdvhylktlrcadfvvkepmvigHECAGVIEKVgsevktlvpgdrvtlvpgdrvalepgiscwrcdhckggrynlcpemkffatppvhgslanqvvhpadlcfklpdnvsleegamceplsvgvhacrranigpetnvlimgaGPIGLVTMLAARafgaprivivdvddyRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTgidvsfdcaglnktmstalgatcaggkvclvgmghhemtvpltpaavreVDVVGVFRYKNTWPLCLELLRsgkidvkplvthrfgfsQKEVEEAFETSARGGTAIKVMFNL
Flexible Loop (DISEMBL)
mgkggmsqgekedGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKvgsevktlvpgdrvtlvpgdrvalepgiscwrcdhCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAkeigadnivkvSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAfetsarggtaiKVMFNL
Low Complexity Region (SEG)
MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL
Disordered region (IsUnstruct)
*****************NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQK**********************
Disordered Region (DISOPRED)
*********************WLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL
Disordered Region (DISEMBL)
**************EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL
Disordered Region (DISPRO)
************DGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNxxxxxxxxxxxxxxxxxxxxxMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	372	2.2.26 [Sep-21-2011]
Q1PSI9	366	L-idonate 5-dehydrogenase	no	no	0.975	0.991	0.778	1e-173
Q58D31	356	Sorbitol dehydrogenase OS	yes	no	0.911	0.952	0.485	3e-88
P27867	357	Sorbitol dehydrogenase OS	yes	no	0.913	0.952	0.484	9e-88
Q64442	357	Sorbitol dehydrogenase OS	yes	no	0.913	0.952	0.478	2e-87
Q00796	357	Sorbitol dehydrogenase OS	yes	no	0.913	0.952	0.478	2e-86
Q5R5F3	357	Sorbitol dehydrogenase OS	yes	no	0.913	0.952	0.476	2e-86
P07846	354	Sorbitol dehydrogenase OS	N/A	no	0.908	0.954	0.480	2e-86
Q4R639	357	Sorbitol dehydrogenase OS	N/A	no	0.913	0.952	0.473	6e-86
A1CFY8	358	Probable D-xylulose reduc	N/A	no	0.905	0.941	0.425	2e-71
Q86ZV0	358	D-xylulose reductase A OS	no	no	0.913	0.949	0.420	4e-71

>sp|Q1PSI9|IDND_VITVI L-idonate 5-dehydrogenase OS=Vitis vinifera GN=VIT_16s0100g00290 PE=1 SV=2

 Score =  606 bits (1562), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 292/375 (77%), Positives = 329/375 (87%), Gaps = 12/375 (3%)

Query: 1   MGKGGMSQGE---KEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSD 57
           MGKGG S+     KE GEE NMAAWLLG+ TLKIQP+ LPSLGPYDV VR+KAVGICGSD
Sbjct: 1   MGKGGNSEDAVSGKEHGEE-NMAAWLLGIKTLKIQPYILPSLGPYDVKVRIKAVGICGSD 59

Query: 58  VHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISC 117
           VH+ KT+RCA+F+VK+PMVIGHECAG+IE+VGSEVK LV GDRV        ALEPGISC
Sbjct: 60  VHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKNLVAGDRV--------ALEPGISC 111

Query: 118 WRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV 177
            RC  C+ G+YNLC EMKFF +PP +GSLANQVVHP++LCFKLPDNVSLEEGAMCEPLSV
Sbjct: 112 NRCSLCRNGQYNLCREMKFFGSPPTNGSLANQVVHPSNLCFKLPDNVSLEEGAMCEPLSV 171

Query: 178 GVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN 237
           G+HACRRAN+GPETNVLIMG+GPIGLVTMLAARAFGAPRIV+VDVDD RL++AK++GAD+
Sbjct: 172 GIHACRRANVGPETNVLIMGSGPIGLVTMLAARAFGAPRIVLVDVDDQRLAIAKDLGADD 231

Query: 238 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH 297
           I++VSTN+QD+ EEV KIQ  M TG+DVSFDC G NKTMSTAL AT AGGKVCLVG+   
Sbjct: 232 IIRVSTNIQDLDEEVAKIQSTMVTGVDVSFDCVGFNKTMSTALNATRAGGKVCLVGLAQS 291

Query: 298 EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 357
           EMTVPLTPAA REVD+VG+FRY+NTWPLCLE LRSGKIDVKPL+THRF FSQK+VEEAFE
Sbjct: 292 EMTVPLTPAAAREVDIVGIFRYRNTWPLCLEFLRSGKIDVKPLITHRFTFSQKDVEEAFE 351

Query: 358 TSARGGTAIKVMFNL 372
           TSARGG AIKVMFNL
Sbjct: 352 TSARGGNAIKVMFNL 366

Involved in the catabolism of ascorbate to tartrate. The enzyme has no activity with NADP(+).
Vitis vinifera (taxid: 29760)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: nEC: 8

>sp|Q58D31|DHSO_BOVIN Sorbitol dehydrogenase OS=Bos taurus GN=SORD PE=2 SV=3

 Score =  325 bits (833), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 172/354 (48%), Positives = 240/354 (67%), Gaps = 15/354 (4%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct: 8   NLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVL 67

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
           GHE +G + KVGS V+ L PGDRV        A+EPG      + CK GRYNL P + F 
Sbjct: 68  GHEASGTVVKVGSLVRHLQPGDRV--------AIEPGAPRETDEFCKIGRYNLSPTIFFC 119

Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
           ATPP  G+L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ G
Sbjct: 120 ATPPDDGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCG 179

Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQ 256
           AGPIGLV++LAA+A GA ++V+ D+   RLS AKE+GAD I+++S  + Q+IA++VE + 
Sbjct: 180 AGPIGLVSLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILQISNESPQEIAKKVEGL- 238

Query: 257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 316
             +G+  +V+ +C G+  ++   + AT +GG + LVG+G    +VPL  AA REVD+ GV
Sbjct: 239 --LGSKPEVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGV 296

Query: 317 FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 370
           FRY NTWP+ + +L S  ++VKPLVTHRF    ++  EAFETS + G  +KVM 
Sbjct: 297 FRYCNTWPMAISMLASKSVNVKPLVTHRFPL--EKALEAFETSKK-GLGLKVMI 347

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P27867|DHSO_RAT Sorbitol dehydrogenase OS=Rattus norvegicus GN=Sord PE=1 SV=4

 Score =  323 bits (829), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 172/355 (48%), Positives = 240/355 (67%), Gaps = 15/355 (4%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   ++++ + +P LGP DVL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct: 9   NLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVL 68

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
           GHE AG + KVG  VK L PGDRV        A+EPG+     + CK GRYNL P + F 
Sbjct: 69  GHEAAGTVTKVGPMVKHLKPGDRV--------AIEPGVPREIDEFCKIGRYNLTPSIFFC 120

Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
           ATPP  G+L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ G
Sbjct: 121 ATPPDDGNLCRFYKHSADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCG 180

Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQ 256
           AGPIG+VT+L A+A GA ++V++D+   RL+ AKE+GAD  ++V+     DIA++VE + 
Sbjct: 181 AGPIGIVTLLVAKAMGASQVVVIDLSASRLAKAKEVGADFTIQVAKETPHDIAKKVESV- 239

Query: 257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 316
             +G+  +V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AAVREVD+ GV
Sbjct: 240 --LGSKPEVTIECTGAESSVQTGIYATHSGGTLVVVGMGPEMINLPLVHAAVREVDIKGV 297

Query: 317 FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 371
           FRY NTWP+ + +L S  ++VKPLVTHRF   +K V EAFET A+ G  +KVM  
Sbjct: 298 FRYCNTWPMAVSMLASKTLNVKPLVTHRFPL-EKAV-EAFET-AKKGLGLKVMIK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q64442|DHSO_MOUSE Sorbitol dehydrogenase OS=Mus musculus GN=Sord PE=1 SV=3

 Score =  323 bits (827), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 170/355 (47%), Positives = 239/355 (67%), Gaps = 15/355 (4%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   ++++ + +P LGP DVL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct: 9   NLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVL 68

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
           GHE AG + KVG  VK L PGDRV        A+EPG+     ++CK GRYNL P + F 
Sbjct: 69  GHEAAGTVTKVGELVKHLKPGDRV--------AIEPGVPREVDEYCKIGRYNLTPTIFFC 120

Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
           ATPP  G+L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ G
Sbjct: 121 ATPPDDGNLCRFYKHNADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCG 180

Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQ 256
           AGP+G+VT+L A+A GA ++V+ D+   RL+ AKE+GAD  ++V     Q+IA +VE + 
Sbjct: 181 AGPVGMVTLLVAKAMGAAQVVVTDLSASRLTKAKEVGADFTIQVGKETPQEIASKVESL- 239

Query: 257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 316
             +G+  +V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AA+REVD+ GV
Sbjct: 240 --LGSKPEVTIECTGAESSVQTGIYATHSGGTLVIVGMGAEMVNLPLVHAAIREVDIKGV 297

Query: 317 FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 371
           FRY NTWP+ + +L S  ++VKPLVTHRF   +K V EAFET A+ G  +KVM  
Sbjct: 298 FRYCNTWPMAISMLASKTLNVKPLVTHRFPL-EKAV-EAFET-AKKGVGLKVMIK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q00796|DHSO_HUMAN Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=1 SV=4

 Score =  320 bits (819), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 170/355 (47%), Positives = 234/355 (65%), Gaps = 15/355 (4%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct: 9   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 68

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
           GHE +G +EKVGS VK L PGDRV        A+EPG      + CK GRYNL P + F 
Sbjct: 69  GHEASGTVEKVGSSVKHLKPGDRV--------AIEPGAPRENDEFCKMGRYNLSPSIFFC 120

Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
           ATPP  G+L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ G
Sbjct: 121 ATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCG 180

Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQ 256
           AGPIG+VT+L A+A GA ++V+ D+   RLS AKEIGAD ++++S  + Q+IA +VE   
Sbjct: 181 AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE--- 237

Query: 257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 316
             +G   +V+ +C G   ++   + AT +GG + LVG+G    TVPL  AA+REVD+ GV
Sbjct: 238 GQLGCKPEVTIECTGAEASIQAGIYATRSGGNLVLVGLGSEMTTVPLLHAAIREVDIKGV 297

Query: 317 FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 371
           FRY NTWP+ + +L S  ++VKPLVTHRF    ++  EAFET  + G  +K+M  
Sbjct: 298 FRYCNTWPVAISMLASKSVNVKPLVTHRFPL--EKALEAFETFKK-GLGLKIMLK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q5R5F3|DHSO_PONAB Sorbitol dehydrogenase OS=Pongo abelii GN=SORD PE=2 SV=1

 Score =  319 bits (817), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 169/355 (47%), Positives = 235/355 (66%), Gaps = 15/355 (4%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct: 9   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEDGRIGNFIVKKPMVL 68

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
           GHE +G +EKVGS VK L PGDRV        A+EPG      + CK GRYNL P + F 
Sbjct: 69  GHEASGTVEKVGSLVKHLKPGDRV--------AIEPGAPRENDEFCKIGRYNLSPSIFFC 120

Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
           ATPP  G+L     H A  C+KLPDNV+ EEGAM EPLSVG+HACRR  +     VL+ G
Sbjct: 121 ATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGAMIEPLSVGIHACRRGGVTLGHKVLVCG 180

Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQ 256
           AGPIG+VT+L A+A GA ++V+ D+   RLS AKEIGAD ++++S  + Q+IA +VE + 
Sbjct: 181 AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGL- 239

Query: 257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 316
             +G   +V+ +C G   ++   + AT +GG + LVG+G    T+PL  AA+REVD+ GV
Sbjct: 240 --LGCKPEVTIECTGAGASIQAGIYATHSGGTLVLVGLGSEMTTIPLLHAAIREVDIKGV 297

Query: 317 FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 371
           FRY NTWP+ + +L S  ++VKPL+THRF    ++  EAFET  + G  +K+M  
Sbjct: 298 FRYCNTWPVAISMLASKSVNVKPLITHRFPL--EKALEAFETFKK-GLGLKIMLK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P07846|DHSO_SHEEP Sorbitol dehydrogenase OS=Ovis aries GN=SORD PE=1 SV=1

 Score =  319 bits (817), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 170/354 (48%), Positives = 239/354 (67%), Gaps = 16/354 (4%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct: 7   NLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQG-RIGDFVVKKPMVL 65

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
           GHE +G + KVGS V+ L PGDRV        A++PG      + CK GRYNL P + F 
Sbjct: 66  GHEASGTVVKVGSLVRHLQPGDRV--------AIQPGAPRQTDEFCKIGRYNLSPTIFFC 117

Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
           ATPP  G+L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ G
Sbjct: 118 ATPPDDGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCG 177

Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQ 256
           AGPIGLV +LAA+A GA ++V+ D+   RLS AKE+GAD I+++S  + ++IA++VE + 
Sbjct: 178 AGPIGLVNLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKVEGL- 236

Query: 257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 316
             +G+  +V+ +C G+  ++   + AT +GG + LVG+G    +VPL  AA REVD+ GV
Sbjct: 237 --LGSKPEVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGV 294

Query: 317 FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 370
           FRY NTWP+ + +L S  ++VKPLVTHRF    ++  EAFETS + G  +KVM 
Sbjct: 295 FRYCNTWPMAISMLASKSVNVKPLVTHRFPL--EKALEAFETSKK-GLGLKVMI 345

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Ovis aries (taxid: 9940)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q4R639|DHSO_MACFA Sorbitol dehydrogenase OS=Macaca fascicularis GN=SORD PE=2 SV=3

 Score =  317 bits (813), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 168/355 (47%), Positives = 236/355 (66%), Gaps = 15/355 (4%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct: 9   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEEGRIGNFIVKKPMVL 68

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
           GHE +G +EKVGS VK L PGDRV        A+EPG+     + CK GRYNL P + F 
Sbjct: 69  GHEASGTVEKVGSLVKHLKPGDRV--------AIEPGVPRENDEFCKSGRYNLSPSIFFC 120

Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
           ATPP  G+L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ G
Sbjct: 121 ATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHRVLVCG 180

Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQ 256
           AGPIG+V++L A+A GA ++V+ D+   RLS AKEIGAD ++++S  + Q+IA +VE + 
Sbjct: 181 AGPIGVVSLLVAKAMGAAQVVVTDLSAPRLSKAKEIGADLVLQISKESPQEIAGKVEGL- 239

Query: 257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 316
             +G   +V+ +C G   ++   + AT +GG + LVG+G    T+PL  AAVREVD+ GV
Sbjct: 240 --LGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTIPLLHAAVREVDIKGV 297

Query: 317 FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 371
           FRY NTWP+ + +L S  +++KPLVTHRF    ++  EAFET  + G  +K+M  
Sbjct: 298 FRYCNTWPVAISMLASKSVNIKPLVTHRFPL--EKALEAFETFKK-GLGLKIMLK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Macaca fascicularis (taxid: 9541)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|A1CFY8|XYL2_ASPCL Probable D-xylulose reductase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=xdhA PE=3 SV=2

 Score =  269 bits (688), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 153/360 (42%), Positives = 217/360 (60%), Gaps = 23/360 (6%)

Query: 18  NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMV 76
           N++  L G++ +K +   +P L  P+DV+V +K  GICGSDVHY +      FVVK+PMV
Sbjct: 10  NLSFVLEGIHQVKFEDRPIPELRDPHDVIVNVKYTGICGSDVHYWEHGAIGHFVVKDPMV 69

Query: 77  IGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF 136
           +GHE +GV+ KVGS V +L    +V    GDRVA+EPG+ C RC+ CK G+YNLC +M F
Sbjct: 70  LGHESSGVVAKVGSAVTSL----KV----GDRVAMEPGVPCRRCEPCKAGKYNLCEKMAF 121

Query: 137 FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIM 196
            ATPP  G+LA     P D C+KLP+N+SL+EGA+ EPL V VH  R+A+I P  +V++ 
Sbjct: 122 AATPPYDGTLAKYYPLPEDFCYKLPENISLQEGALMEPLGVAVHITRQASIKPGESVVVF 181

Query: 197 GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI---VKVS--TNLQDIAEE 251
           GAGP+GL+    ARAFGA +I+ VD+   RL  AK+  A  I    KVS   N   + EE
Sbjct: 182 GAGPVGLLCCAVARAFGASKIIAVDIQKTRLDFAKKYAATAIFEPAKVSAVANADQMREE 241

Query: 252 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREV 311
            +     +G G DV  D +G   ++ T +     GG     GMG +E+  P+  A  +E+
Sbjct: 242 ND-----LGPGADVVIDASGAEPSVHTGIHVLRPGGTYVQGGMGRNEINFPIMAACTKEL 296

Query: 312 DVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 370
            + G FRY    + L ++L+ SGK++VK L+T    F  +E E+AF+   + G  IK + 
Sbjct: 297 TIKGSFRYGSGDYKLAVDLVASGKVNVKDLITGVVEF--QEAEQAFK-EVKAGKGIKTLI 353

Xylitol dehydrogenase which catalyzes the conversion of xylitol to D-xylulose. Xylose is a major component of hemicelluloses such as xylan. Most fungi utilize D-xylose via three enzymatic reactions, xylose reductase (XR), xylitol dehydrogenase (XDH), and xylulokinase, to form xylulose 5-phosphate, which enters pentose phosphate pathway.

Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) (taxid: 344612)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

>sp|Q86ZV0|XYL2_ASPOR D-xylulose reductase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=xdhA PE=3 SV=2

 Score =  268 bits (686), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 150/357 (42%), Positives = 215/357 (60%), Gaps = 17/357 (4%)

Query: 18  NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMV 76
           N++  L G++ +K +   +P L   +DVLV ++  GICGSDVHY +      FVVK+PMV
Sbjct: 10  NLSFVLEGIHKVKFEDRPIPQLRDAHDVLVDVRFTGICGSDVHYWEHGSIGQFVVKDPMV 69

Query: 77  IGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF 136
           +GHE +GVI KVGS V TL    +V    GD VA+EPGI C RC+ CK G+YNLC +M F
Sbjct: 70  LGHESSGVISKVGSAVTTL----KV----GDHVAMEPGIPCRRCEPCKEGKYNLCEKMAF 121

Query: 137 FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIM 196
            ATPP  G+LA   V P D C+KLP+N++L+E A+ EPLSV VH  ++AN+ P  +V++ 
Sbjct: 122 AATPPYDGTLAKYYVLPEDFCYKLPENINLQEAAVMEPLSVAVHIVKQANVAPGQSVVVF 181

Query: 197 GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI- 255
           GAGP+GL+    ARAFG+P+++ VD+   RL  AK+  A  I + S       E  E+I 
Sbjct: 182 GAGPVGLLCCAVARAFGSPKVIAVDIQKGRLEFAKKYAATAIFEPSK--VSALENAERIV 239

Query: 256 -QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV 314
            +  +G G D+  D +G   ++ T +     GG     GMG +E+T P+  A  +E++V 
Sbjct: 240 NENDLGRGADIVIDASGAEPSVHTGIHVLRPGGTYVQGGMGRNEITFPIMAACTKELNVR 299

Query: 315 GVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 370
           G FRY    + L + L+ SGK+ VK L+T    F  ++ E+AF    + G  IK + 
Sbjct: 300 GSFRYGSGDYKLAVNLVASGKVSVKELITGVVSF--EDAEQAFH-EVKAGKGIKTLI 353

Xylitol dehydrogenase which catalyzes the conversion of xylitol to D-xylulose. Xylose is a major component of hemicelluloses such as xylan. Most fungi utilize D-xylose via three enzymatic reactions, xylose reductase (XR), xylitol dehydrogenase (XDH), and xylulokinase, to form xylulose 5-phosphate, which enters pentose phosphate pathway.

Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	372
224120122	364	predicted protein [Populus trichocarpa]	0.978	1.0	0.852	0.0
255539581	364	alcohol dehydrogenase, putative [Ricinus	0.978	1.0	0.857	0.0
358345351	362	L-idonate 5-dehydrogenase [Medicago trun	0.973	1.0	0.838	0.0
358248648	364	uncharacterized protein LOC100791559 [Gl	0.978	1.0	0.844	0.0
356559880	364	PREDICTED: L-idonate 5-dehydrogenase-lik	0.978	1.0	0.838	0.0
217072128	362	unknown [Medicago truncatula] gi|3885198	0.973	1.0	0.833	0.0
350538545	355	sorbitol related enzyme [Solanum lycoper	0.954	1.0	0.838	0.0
225469310	365	PREDICTED: L-idonate 5-dehydrogenase [Vi	0.978	0.997	0.844	1e-180
15242240	364	L-iditol 2-dehydrogenase [Arabidopsis th	0.978	1.0	0.827	1e-179
21553353	364	sorbitol dehydrogenase-like protein [Ara	0.978	1.0	0.825	1e-179

>gi|224120122|ref|XP_002318247.1| predicted protein [Populus trichocarpa] gi|222858920|gb|EEE96467.1| predicted protein [Populus trichocarpa]

 Score =  655 bits (1691), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/372 (85%), Positives = 341/372 (91%), Gaps = 8/372 (2%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS GE +DGEE NMAAWLLGVNTLKIQPF+LP LGP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSHGETKDGEEENMAAWLLGVNTLKIQPFKLPCLGPHDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRC 120
           LKT++CA FVVKEPMVIGHECAG+IE+VGSE+K+LVPGDRV        ALEPGISCWRC
Sbjct: 61  LKTMKCAHFVVKEPMVIGHECAGIIEEVGSEIKSLVPGDRV--------ALEPGISCWRC 112

Query: 121 DHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH 180
             CK GRYNLCP+MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH
Sbjct: 113 YLCKEGRYNLCPDMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH 172

Query: 181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 240
           ACRRANIGPETNVL+MGAGPIGLVT+LAARAFGAPRIVIVDVDDYRLSVAK++GAD IVK
Sbjct: 173 ACRRANIGPETNVLVMGAGPIGLVTLLAARAFGAPRIVIVDVDDYRLSVAKDLGADEIVK 232

Query: 241 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT 300
           VSTNLQD+ +EV  I +AMGTG+DV+FDCAG NKTMSTAL AT  GGKVCL+GMGH+EMT
Sbjct: 233 VSTNLQDVDQEVVLIHQAMGTGVDVTFDCAGFNKTMSTALSATRPGGKVCLIGMGHNEMT 292

Query: 301 VPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 360
           VPLTPAA REVDV+GVFRYKNTWPLC+E L SGKIDVKPL+THRFGFSQKEVEEAFETSA
Sbjct: 293 VPLTPAAAREVDVIGVFRYKNTWPLCIEFLSSGKIDVKPLITHRFGFSQKEVEEAFETSA 352

Query: 361 RGGTAIKVMFNL 372
            G TAIKVMFNL
Sbjct: 353 SGSTAIKVMFNL 364

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539581|ref|XP_002510855.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223549970|gb|EEF51457.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  655 bits (1689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/372 (85%), Positives = 341/372 (91%), Gaps = 8/372 (2%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS GE +D +E N+AAWLLGVNTLKIQPF+LPSLGP DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSHGENKDVQEENLAAWLLGVNTLKIQPFKLPSLGPNDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRC 120
           LKTLRCA FVV+EPMVIGHECAG+IE VGSEVK LVPGDRV        ALEPGISCWRC
Sbjct: 61  LKTLRCAHFVVEEPMVIGHECAGIIEGVGSEVKNLVPGDRV--------ALEPGISCWRC 112

Query: 121 DHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH 180
           D CK GRYNLCPEMKFFATPPVHGSLANQVVHPADLCF+LP+NVSLEEGAMCEPLSVGVH
Sbjct: 113 DLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFRLPENVSLEEGAMCEPLSVGVH 172

Query: 181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 240
           ACRRANIGPETNVL+MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK++GAD IVK
Sbjct: 173 ACRRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKDLGADAIVK 232

Query: 241 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT 300
           VST++QD+A+EV  I KAMGTG+DV+ DCAG NKTMS+AL AT +GGKVCLVGMGH+EMT
Sbjct: 233 VSTSIQDVADEVVLIHKAMGTGVDVTLDCAGFNKTMSSALSATRSGGKVCLVGMGHNEMT 292

Query: 301 VPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 360
           VPLTPAA REVDV+GVFRYKNTWPLCLE LRSGKIDVKPL+THRFGFSQKEVE AFETSA
Sbjct: 293 VPLTPAAAREVDVIGVFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEAAFETSA 352

Query: 361 RGGTAIKVMFNL 372
           RGG AIKVMFNL
Sbjct: 353 RGGDAIKVMFNL 364

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358345351|ref|XP_003636744.1| L-idonate 5-dehydrogenase [Medicago truncatula] gi|355502679|gb|AES83882.1| L-idonate 5-dehydrogenase [Medicago truncatula]

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/372 (83%), Positives = 342/372 (91%), Gaps = 10/372 (2%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS    +D E+ NMAAWL+G+NTLKIQPF LPSLGP+DV ++MKAVGICGSDVHY
Sbjct: 1   MGKGGMSV--DDDVEQQNMAAWLVGLNTLKIQPFNLPSLGPHDVRIKMKAVGICGSDVHY 58

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRC 120
           LKTLRCADF+VKEPMVIGHECAG+IE+VGS+VKTLVPGDRV        A+EPGISCWRC
Sbjct: 59  LKTLRCADFIVKEPMVIGHECAGIIEEVGSQVKTLVPGDRV--------AIEPGISCWRC 110

Query: 121 DHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH 180
           DHCK GRYNLCP+MKFFATPPVHGSLANQ+VHPADLCFKLP+NVSLEEGAMCEPLSVGVH
Sbjct: 111 DHCKLGRYNLCPDMKFFATPPVHGSLANQIVHPADLCFKLPENVSLEEGAMCEPLSVGVH 170

Query: 181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 240
           ACRRANIGPETNVLIMGAGPIGLVTML+ARAFGAPRIV+VDVDD+RLSVAK +GAD+IVK
Sbjct: 171 ACRRANIGPETNVLIMGAGPIGLVTMLSARAFGAPRIVVVDVDDHRLSVAKSLGADDIVK 230

Query: 241 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT 300
           VSTN+QD+AEEV++I   +G G+DV+FDCAG NKTM+TAL AT  GGKVCLVGMGH EMT
Sbjct: 231 VSTNIQDVAEEVKQIHNVLGAGVDVTFDCAGFNKTMTTALTATQPGGKVCLVGMGHSEMT 290

Query: 301 VPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 360
           VPLTPAA REVDVVG+FRYKNTWPLCLE LRSGKIDVKPL+THRFGFSQKEVEEAFETSA
Sbjct: 291 VPLTPAAAREVDVVGIFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSA 350

Query: 361 RGGTAIKVMFNL 372
           RGG AIKVMFNL
Sbjct: 351 RGGNAIKVMFNL 362

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248648|ref|NP_001239661.1| uncharacterized protein LOC100791559 [Glycine max] gi|255638941|gb|ACU19772.1| unknown [Glycine max]

 Score =  650 bits (1677), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/372 (84%), Positives = 339/372 (91%), Gaps = 8/372 (2%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS  E  +G+E NMAAWL+G+N+LKIQPF+LP+LGP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSIDEHGEGKEENMAAWLVGINSLKIQPFKLPTLGPHDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRC 120
           LKTLRCA F+VKEPMVIGHECAG+IE+VGS+VK+LVPGDRV        A+EPGISCWRC
Sbjct: 61  LKTLRCAHFIVKEPMVIGHECAGIIEEVGSQVKSLVPGDRV--------AIEPGISCWRC 112

Query: 121 DHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH 180
           DHCK GRYNLC +MKFFATPPVHGSLANQ+VHPADLCFKLPDNVSLEEGAMCEPLSVGVH
Sbjct: 113 DHCKQGRYNLCDDMKFFATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVH 172

Query: 181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 240
           ACRRANIGPET VLIMGAGPIGLVTMLAARAFGAPR VIVDVDDYRLSVAK +GAD+IVK
Sbjct: 173 ACRRANIGPETYVLIMGAGPIGLVTMLAARAFGAPRTVIVDVDDYRLSVAKSLGADDIVK 232

Query: 241 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT 300
           VSTN+QD+AEEV +IQK MG  IDV+FDCAG +KTMSTAL AT  GGKVCLVGMGH EMT
Sbjct: 233 VSTNIQDVAEEVVQIQKVMGADIDVTFDCAGFDKTMSTALSATQPGGKVCLVGMGHSEMT 292

Query: 301 VPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 360
           VPLTPAA REVDV+GVFRY NTWPLCLE LRSGKIDVKPL+THRFGFSQKEVEEAFETSA
Sbjct: 293 VPLTPAAAREVDVLGVFRYMNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSA 352

Query: 361 RGGTAIKVMFNL 372
           RGG AIKVMFNL
Sbjct: 353 RGGNAIKVMFNL 364

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559880|ref|XP_003548224.1| PREDICTED: L-idonate 5-dehydrogenase-like [Glycine max]

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/372 (83%), Positives = 340/372 (91%), Gaps = 8/372 (2%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS  E  +G+E NMAAWL+G+NTLKIQPF+LP+LGP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSIDEHGEGKEENMAAWLVGMNTLKIQPFKLPTLGPHDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRC 120
           LKTLRCA F+VKEPMVIGHECAG+IE+VGS+VK+LVPGDRV        A+EPGISCW C
Sbjct: 61  LKTLRCAHFIVKEPMVIGHECAGIIEEVGSQVKSLVPGDRV--------AIEPGISCWHC 112

Query: 121 DHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH 180
           +HCK GRYNLC +MKFFATPPVHGSLANQ+VHPADLCFKLPDNVSLEEGAMCEPLSVGVH
Sbjct: 113 NHCKHGRYNLCDDMKFFATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVH 172

Query: 181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 240
           ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAP+ VIVDVDD+RLSVAK +GAD+I+K
Sbjct: 173 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPKTVIVDVDDHRLSVAKSLGADDIIK 232

Query: 241 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT 300
           VSTN++D+AEEV +IQK MG GIDV+FDCAG +KTMSTAL AT  GGKVCLVGMGH EMT
Sbjct: 233 VSTNIKDVAEEVVQIQKVMGAGIDVTFDCAGFDKTMSTALSATQPGGKVCLVGMGHSEMT 292

Query: 301 VPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 360
           VPLTPAA REVDVVGVFRY NTWPLCLE LRSGKIDVKPL+THRFGFSQKEVEEAFETSA
Sbjct: 293 VPLTPAAAREVDVVGVFRYMNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSA 352

Query: 361 RGGTAIKVMFNL 372
           RGG AIKVMFNL
Sbjct: 353 RGGNAIKVMFNL 364

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217072128|gb|ACJ84424.1| unknown [Medicago truncatula] gi|388519843|gb|AFK47983.1| unknown [Medicago truncatula]

 Score =  646 bits (1667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/372 (83%), Positives = 340/372 (91%), Gaps = 10/372 (2%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS    +D E+ NMAAWL+G+NTLKIQPF LPSLGP+DV ++MKAVGICGSDVHY
Sbjct: 1   MGKGGMSV--DDDVEQQNMAAWLVGLNTLKIQPFNLPSLGPHDVRIKMKAVGICGSDVHY 58

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRC 120
           LKTLRCADF+VKEPMVIGHECAG+I + GS+VKTLVPGDRV        A+EPGISCWRC
Sbjct: 59  LKTLRCADFIVKEPMVIGHECAGIIGEAGSQVKTLVPGDRV--------AIEPGISCWRC 110

Query: 121 DHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH 180
           DHCK GRYNLCP+MKFFATPPVHGSLANQ+VHPADLCFKLP+NVSLEEGAMCEPLSVGVH
Sbjct: 111 DHCKLGRYNLCPDMKFFATPPVHGSLANQIVHPADLCFKLPENVSLEEGAMCEPLSVGVH 170

Query: 181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 240
           ACRRANIGPETNVLIMGAGPIGLVTML+ARAFGAPRIV+VDVDD+RLSVAK +GAD+IVK
Sbjct: 171 ACRRANIGPETNVLIMGAGPIGLVTMLSARAFGAPRIVVVDVDDHRLSVAKSLGADDIVK 230

Query: 241 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT 300
           VSTN+QD+AEEV++I   +G G+DV+FDCAG NKTM+TAL AT  GGKVCLVGMGH EMT
Sbjct: 231 VSTNIQDVAEEVKQIHNVLGAGVDVTFDCAGFNKTMTTALTATQPGGKVCLVGMGHSEMT 290

Query: 301 VPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 360
           VPLTPAA REVDVVG+FRYKNTWPLCLE LRSGKIDVKPL+THRFGFSQKEVEEAFETSA
Sbjct: 291 VPLTPAAAREVDVVGIFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSA 350

Query: 361 RGGTAIKVMFNL 372
           RGG AIKVMFNL
Sbjct: 351 RGGNAIKVMFNL 362

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350538545|ref|NP_001234092.1| sorbitol related enzyme [Solanum lycopersicum] gi|78183416|dbj|BAE47038.1| sorbitol related enzyme [Solanum lycopersicum]

 Score =  644 bits (1660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/372 (83%), Positives = 337/372 (90%), Gaps = 17/372 (4%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGG  +         NMAAWLLGVNTLKIQPF LP+LGP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGSDE---------NMAAWLLGVNTLKIQPFNLPALGPHDVRVRMKAVGICGSDVHY 51

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRC 120
           LKT+RCADFVVKEPMVIGHECAG+IE+VG EVKTLVPGDRV        ALEPGISCWRC
Sbjct: 52  LKTMRCADFVVKEPMVIGHECAGIIEEVGGEVKTLVPGDRV--------ALEPGISCWRC 103

Query: 121 DHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH 180
           + CK GRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD++SLEEGAMCEPLSVGVH
Sbjct: 104 NLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDDISLEEGAMCEPLSVGVH 163

Query: 181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 240
           ACRRAN+GPETN+L++GAGPIGLVT+LAARAFGAPRIVIVDVDDYRLSVAK++GAD+IVK
Sbjct: 164 ACRRANVGPETNILVLGAGPIGLVTLLAARAFGAPRIVIVDVDDYRLSVAKKLGADDIVK 223

Query: 241 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT 300
           VS N+QD+A ++E IQKAMG GID SFDCAG NKTMSTALGAT  GGKVCLVGMGHHEMT
Sbjct: 224 VSINIQDVATDIENIQKAMGGGIDASFDCAGFNKTMSTALGATRPGGKVCLVGMGHHEMT 283

Query: 301 VPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 360
           VPLTPAA REVDV+G+FRYKNTWPLCLE LRSGKIDVKPL+THRFGFSQ+EVEEAFETSA
Sbjct: 284 VPLTPAAAREVDVIGIFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQEEVEEAFETSA 343

Query: 361 RGGTAIKVMFNL 372
           RGG AIKVMFNL
Sbjct: 344 RGGDAIKVMFNL 355

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225469310|ref|XP_002269895.1| PREDICTED: L-idonate 5-dehydrogenase [Vitis vinifera] gi|297741125|emb|CBI31856.3| unnamed protein product [Vitis vinifera]

 Score =  637 bits (1643), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 315/373 (84%), Positives = 337/373 (90%), Gaps = 9/373 (2%)

Query: 1   MGKGGMSQGEKEDGEEV-NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVH 59
           MGKGGMSQG    GE   NMAAWLLGVN LKIQPF LP LGP+DV VRMKAVGICGSDVH
Sbjct: 1   MGKGGMSQGGDGRGEGEENMAAWLLGVNNLKIQPFILPPLGPHDVRVRMKAVGICGSDVH 60

Query: 60  YLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWR 119
           YLK LRCADF+VKEPMVIGHECAG+I++VG +VK+LVPGDRV        ALEPGISCWR
Sbjct: 61  YLKKLRCADFIVKEPMVIGHECAGIIDEVGPQVKSLVPGDRV--------ALEPGISCWR 112

Query: 120 CDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV 179
           C  CK GRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV
Sbjct: 113 CQLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV 172

Query: 180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 239
           HACRRA+IGPE+NVL+MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK++GAD IV
Sbjct: 173 HACRRADIGPESNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKDLGADEIV 232

Query: 240 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM 299
           KVSTN+QD+AEEV +I KAMG  +DVSFDCAG +KTMSTAL AT  GGKVCLVGMGH+EM
Sbjct: 233 KVSTNIQDVAEEVVQIHKAMGARVDVSFDCAGFDKTMSTALSATSTGGKVCLVGMGHNEM 292

Query: 300 TVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS 359
           TVPLTPAA REVDVVGVFRYKNTWP+C+E LRS KIDVKPL+THRFGFSQ+EVEEAFETS
Sbjct: 293 TVPLTPAAAREVDVVGVFRYKNTWPICIEFLRSVKIDVKPLITHRFGFSQREVEEAFETS 352

Query: 360 ARGGTAIKVMFNL 372
           ARGGTAIKVMFNL
Sbjct: 353 ARGGTAIKVMFNL 365

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242240|ref|NP_200010.1| L-iditol 2-dehydrogenase [Arabidopsis thaliana] gi|42573658|ref|NP_974925.1| L-iditol 2-dehydrogenase [Arabidopsis thaliana] gi|13877797|gb|AAK43976.1|AF370161_1 putative sorbitol dehydrogenase [Arabidopsis thaliana] gi|10177732|dbj|BAB11045.1| sorbitol dehydrogenase-like protein [Arabidopsis thaliana] gi|22136876|gb|AAM91782.1| putative sorbitol dehydrogenase [Arabidopsis thaliana] gi|110741231|dbj|BAF02166.1| sorbitol dehydrogenase-like protein [Arabidopsis thaliana] gi|332008769|gb|AED96152.1| L-iditol 2-dehydrogenase [Arabidopsis thaliana] gi|332008770|gb|AED96153.1| L-iditol 2-dehydrogenase [Arabidopsis thaliana]

 Score =  634 bits (1634), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 308/372 (82%), Positives = 333/372 (89%), Gaps = 8/372 (2%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMSQGE    EE NMAAWL+G+NTLKIQPF LPS+GP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSQGEGSKVEEENMAAWLVGINTLKIQPFLLPSVGPHDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRC 120
           LKT+RCADFVVKEPMVIGHECAG+IE+VG EVK LV GDRV        ALEPGISCWRC
Sbjct: 61  LKTMRCADFVVKEPMVIGHECAGIIEEVGEEVKHLVVGDRV--------ALEPGISCWRC 112

Query: 121 DHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH 180
           + C+ GRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP+NVSLEEGAMCEPLSVGVH
Sbjct: 113 NLCREGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVH 172

Query: 181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 240
           ACRRA +GPETNVL+MGAGPIGLVTMLAARAF  PRIVIVDVD+ RL+VAK++GAD IV+
Sbjct: 173 ACRRAEVGPETNVLVMGAGPIGLVTMLAARAFSVPRIVIVDVDENRLAVAKQLGADEIVQ 232

Query: 241 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT 300
           V+TNL+D+  EVE+IQKAMG+ IDV+FDCAG NKTMSTAL AT  GGKVCLVGMGH  MT
Sbjct: 233 VTTNLEDVGSEVEQIQKAMGSNIDVTFDCAGFNKTMSTALAATRCGGKVCLVGMGHGIMT 292

Query: 301 VPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 360
           VPLTPAA REVDVVGVFRYKNTWPLCLE L SGKIDVKPL+THRFGFSQKEVE+AFETSA
Sbjct: 293 VPLTPAAAREVDVVGVFRYKNTWPLCLEFLTSGKIDVKPLITHRFGFSQKEVEDAFETSA 352

Query: 361 RGGTAIKVMFNL 372
           RG  AIKVMFNL
Sbjct: 353 RGSNAIKVMFNL 364

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21553353|gb|AAM62446.1| sorbitol dehydrogenase-like protein [Arabidopsis thaliana]

 Score =  632 bits (1631), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 307/372 (82%), Positives = 333/372 (89%), Gaps = 8/372 (2%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMSQGE    EE NMAAWL+G+NTLKIQPF LPS+GP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSQGEGSKVEEENMAAWLVGINTLKIQPFLLPSVGPHDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRC 120
           LKT+RCADFVVKEPMVIGHECAG+IE+VG EVK LV GDRV        ALEPGISCWRC
Sbjct: 61  LKTMRCADFVVKEPMVIGHECAGIIEEVGEEVKHLVVGDRV--------ALEPGISCWRC 112

Query: 121 DHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH 180
           + C+ GRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP+NVSLEEGAMCEPLSVGVH
Sbjct: 113 NLCREGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVH 172

Query: 181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 240
           ACRRA +GPETNVL+MGAGPIGLVTMLAA+AF  PRIVIVDVD+ RL+VAK++GAD IV+
Sbjct: 173 ACRRAEVGPETNVLVMGAGPIGLVTMLAAQAFSVPRIVIVDVDENRLAVAKQLGADEIVQ 232

Query: 241 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT 300
           V+TNL+D+  EVE+IQKAMG+ IDV+FDCAG NKTMSTAL AT  GGKVCLVGMGH  MT
Sbjct: 233 VTTNLEDVGSEVEQIQKAMGSNIDVTFDCAGFNKTMSTALAATRCGGKVCLVGMGHGIMT 292

Query: 301 VPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 360
           VPLTPAA REVDVVGVFRYKNTWPLCLE L SGKIDVKPL+THRFGFSQKEVE+AFETSA
Sbjct: 293 VPLTPAAAREVDVVGVFRYKNTWPLCLEFLTSGKIDVKPLITHRFGFSQKEVEDAFETSA 352

Query: 361 RGGTAIKVMFNL 372
           RG  AIKVMFNL
Sbjct: 353 RGSNAIKVMFNL 364

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	372
TAIR|locus:2173093	364	AT5G51970 [Arabidopsis thalian	0.978	1.0	0.827	3.3e-166
FB|FBgn0022359	360	Sodh-2 "Sorbitol dehydrogenase	0.924	0.955	0.514	8.6e-88
FB|FBgn0024289	360	Sodh-1 "Sorbitol dehydrogenase	0.924	0.955	0.508	4.7e-87
WB|WBGene00011003	347	R04B5.5 [Caenorhabditis elegan	0.908	0.974	0.471	1.7e-84
RGD|3734	357	Sord "sorbitol dehydrogenase"	0.908	0.946	0.487	7.2e-84
MGI|MGI:98266	357	Sord "sorbitol dehydrogenase"	0.908	0.946	0.481	1.5e-83
UNIPROTKB|Q58D31	356	SORD "Sorbitol dehydrogenase"	0.908	0.949	0.490	5e-83
UNIPROTKB|F1PXG0	356	SORD "Uncharacterized protein"	0.908	0.949	0.490	1.3e-82
UNIPROTKB|Q00796	357	SORD "Sorbitol dehydrogenase"	0.908	0.946	0.484	3.6e-82
UNIPROTKB|Q5R5F3	357	SORD "Sorbitol dehydrogenase"	0.908	0.946	0.481	3.6e-82

TAIR|locus:2173093 AT5G51970 [Arabidopsis thaliana (taxid:3702)]

 Score = 1617 (574.3 bits), Expect = 3.3e-166, P = 3.3e-166
 Identities = 308/372 (82%), Positives = 333/372 (89%)

Query:     1 MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
             MGKGGMSQGE    EE NMAAWL+G+NTLKIQPF LPS+GP+DV VRMKAVGICGSDVHY
Sbjct:     1 MGKGGMSQGEGSKVEEENMAAWLVGINTLKIQPFLLPSVGPHDVRVRMKAVGICGSDVHY 60

Query:    61 LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRC 120
             LKT+RCADFVVKEPMVIGHECAG+IE+VG EVK LV GDRV        ALEPGISCWRC
Sbjct:    61 LKTMRCADFVVKEPMVIGHECAGIIEEVGEEVKHLVVGDRV--------ALEPGISCWRC 112

Query:   121 DHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH 180
             + C+ GRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP+NVSLEEGAMCEPLSVGVH
Sbjct:   113 NLCREGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVH 172

Query:   181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 240
             ACRRA +GPETNVL+MGAGPIGLVTMLAARAF  PRIVIVDVD+ RL+VAK++GAD IV+
Sbjct:   173 ACRRAEVGPETNVLVMGAGPIGLVTMLAARAFSVPRIVIVDVDENRLAVAKQLGADEIVQ 232

Query:   241 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT 300
             V+TNL+D+  EVE+IQKAMG+ IDV+FDCAG NKTMSTAL AT  GGKVCLVGMGH  MT
Sbjct:   233 VTTNLEDVGSEVEQIQKAMGSNIDVTFDCAGFNKTMSTALAATRCGGKVCLVGMGHGIMT 292

Query:   301 VPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 360
             VPLTPAA REVDVVGVFRYKNTWPLCLE L SGKIDVKPL+THRFGFSQKEVE+AFETSA
Sbjct:   293 VPLTPAAAREVDVVGVFRYKNTWPLCLEFLTSGKIDVKPLITHRFGFSQKEVEDAFETSA 352

Query:   361 RGGTAIKVMFNL 372
             RG  AIKVMFNL
Sbjct:   353 RGSNAIKVMFNL 364

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

FB|FBgn0022359 Sodh-2 "Sorbitol dehydrogenase-2" [Drosophila melanogaster (taxid:7227)]

 Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
 Identities = 183/356 (51%), Positives = 238/356 (66%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N+ A L G+  L+++   +P +   +VL+ M +VGICGSDVHYL   R  DFV+ +PM+I
Sbjct:     5 NLTAVLHGIEDLRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTKPMII 64

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
             GHE AGV+ K+G +V TL    +V    GDRVA+EPG+ C  CDHCK GRYNLC +M F 
Sbjct:    65 GHEAAGVVAKLGKKVTTL----KV----GDRVAIEPGVPCRYCDHCKQGRYNLCADMVFC 116

Query:   138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
             ATPP  G+L     H AD CFKLPD+VS+EEGA+ EPLSVGVHACRRA +G  + VLI+G
Sbjct:   117 ATPPYDGNLTRYYKHAADFCFKLPDHVSMEEGALLEPLSVGVHACRRAGVGLGSKVLILG 176

Query:   198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 257
             AGPIGLVT+LAA+A GA  I+I D+   RL VAKE+GA + + +  + Q   E V+ + +
Sbjct:   177 AGPIGLVTLLAAQAMGASEILITDLVQQRLDVAKELGATHTLLLQRD-QSAEETVKVVHQ 235

Query:   258 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF 317
              M    D S DC G   +   A+ AT +GG V +VGMG  E+ +PL  A  RE+D+ GVF
Sbjct:   236 TMSEVPDKSIDCCGAESSARLAIFATRSGGVVVVVGMGAPEVKLPLINALAREIDIRGVF 295

Query:   318 RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFNL 372
             RY N +   L L+ SGK++VK LVTH +  +  E  EAFETS RG G AIKVM ++
Sbjct:   296 RYCNDYSAALALVASGKVNVKRLVTHHYDIT--ETAEAFETSRRGTGGAIKVMIHV 349

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=ISS;TAS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

FB|FBgn0024289 Sodh-1 "Sorbitol dehydrogenase 1" [Drosophila melanogaster (taxid:7227)]

 Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
 Identities = 181/356 (50%), Positives = 238/356 (66%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N+ A L G+  ++++   +P +   +VL+ M +VGICGSDVHYL   R  DFV+ +PM+I
Sbjct:     5 NLTAVLHGIEDMRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTKPMII 64

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
             GHE AGV+ K+G +V TL    +V    GDRVA+EPG+ C +CDHCK G+YNLCP M F 
Sbjct:    65 GHESAGVVAKLGKKVTTL----KV----GDRVAIEPGVPCRKCDHCKQGKYNLCPGMVFC 116

Query:   138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
             ATPP  G+L     H AD CFKLPD+V++EEGA+ EPLSVGVHAC+RA +   + VLI+G
Sbjct:   117 ATPPYDGNLTRYYKHAADFCFKLPDHVTMEEGALLEPLSVGVHACKRAEVTLGSKVLILG 176

Query:   198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 257
             AGPIGLVT++AA+A GA  I+I D+   RL VAKE+GA + + +  + Q   E    +QK
Sbjct:   177 AGPIGLVTLMAAQAMGASEILITDLVQQRLDVAKELGATHTLLLKRD-QTAEETAVLVQK 235

Query:   258 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF 317
              MG   D S DC G   +   A+ AT +GG V +VGMG  E+ +PL  A  REVD+ GVF
Sbjct:   236 TMGGQPDKSIDCCGAESSARLAIFATRSGGIVVVVGMGAAEIKLPLINALAREVDIRGVF 295

Query:   318 RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFNL 372
             RY N +   L L+ SGK++VK LVTH F    KE  +AFETS +G G AIKVM ++
Sbjct:   296 RYCNDYAAALALVASGKVNVKRLVTHHFDI--KETAKAFETSRKGLGGAIKVMIHV 349

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=NAS

GO:0000166 "nucleotide binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

WB|WBGene00011003 R04B5.5 [Caenorhabditis elegans (taxid:6239)]

 Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
 Identities = 166/352 (47%), Positives = 238/352 (67%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++A L GV+ L+++   +P  GP  VLV++  VGICGSDVHY        FVVKEPM++
Sbjct:     5 NLSAVLYGVDDLRLEQVPIPKPGPNQVLVKVHTVGICGSDVHYWTHGAIGPFVVKEPMIV 64

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
             GHE +G++ +VG+EVK L    +V    GDR+A+EPG+ C  C+HCK GRYNLCPEM+FF
Sbjct:    65 GHETSGIVSEVGNEVKHL----KV----GDRIAMEPGLPCKLCEHCKTGRYNLCPEMRFF 116

Query:   138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
             ATPPVHG+L+  VVH AD CFKLPDN+S E+GA+ EPLSV +HACRR N+     VL++G
Sbjct:   117 ATPPVHGTLSRFVVHDADFCFKLPDNLSFEDGALIEPLSVAIHACRRGNVQMGHRVLVLG 176

Query:   198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 257
             AGPIG++ ++ A+A GA ++VI D+DD RL++AK++GAD  + V     D  +   +I  
Sbjct:   177 AGPIGVLNLITAKAVGAGKVVITDLDDGRLALAKKLGADATINVKGKSLDAVKS--EIIT 234

Query:   258 AMGTGI-DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 316
             A+G    DV  +C G   ++ TA+  T +GG + LVG+G   + +P+  +A REVD+ G+
Sbjct:   235 ALGDQQPDVCIECTGAQPSIETAITTTKSGGVIVLVGLGADRVEIPIIESATREVDMRGI 294

Query:   317 FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 368
             FRY N +P  +EL+ SGK+++  L   R  +  +E +EAF+ + +    IKV
Sbjct:   295 FRYVNCYPTAIELISSGKLNLSGLT--RAHYKLEETQEAFKRTQKADV-IKV 343

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

RGD|3734 Sord "sorbitol dehydrogenase" [Rattus norvegicus (taxid:10116)]

 Score = 840 (300.8 bits), Expect = 7.2e-84, P = 7.2e-84
 Identities = 172/353 (48%), Positives = 240/353 (67%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++  + G   ++++ + +P LGP DVL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct:     9 NLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVL 68

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
             GHE AG + KVG  VK L PGDRV        A+EPG+     + CK GRYNL P + F 
Sbjct:    69 GHEAAGTVTKVGPMVKHLKPGDRV--------AIEPGVPREIDEFCKIGRYNLTPSIFFC 120

Query:   138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
             ATPP  G+L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ G
Sbjct:   121 ATPPDDGNLCRFYKHSADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCG 180

Query:   198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQ 256
             AGPIG+VT+L A+A GA ++V++D+   RL+ AKE+GAD  ++V+     DIA++VE + 
Sbjct:   181 AGPIGIVTLLVAKAMGASQVVVIDLSASRLAKAKEVGADFTIQVAKETPHDIAKKVESV- 239

Query:   257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 316
               +G+  +V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AAVREVD+ GV
Sbjct:   240 --LGSKPEVTIECTGAESSVQTGIYATHSGGTLVVVGMGPEMINLPLVHAAVREVDIKGV 297

Query:   317 FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 369
             FRY NTWP+ + +L S  ++VKPLVTHRF   +K VE AFET A+ G  +KVM
Sbjct:   298 FRYCNTWPMAVSMLASKTLNVKPLVTHRFPL-EKAVE-AFET-AKKGLGLKVM 347

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=IEA;ISO

GO:0005575 "cellular_component" evidence=ND

GO:0005739 "mitochondrion" evidence=ISO

GO:0006060 "sorbitol metabolic process" evidence=ISO

GO:0006062 "sorbitol catabolic process" evidence=ISO

GO:0006970 "response to osmotic stress" evidence=IEP

GO:0008270 "zinc ion binding" evidence=ISO;IDA

GO:0009725 "response to hormone stimulus" evidence=IDA

GO:0016020 "membrane" evidence=ISO

GO:0030317 "sperm motility" evidence=ISO;ISS

GO:0031514 "motile cilium" evidence=ISS

GO:0031667 "response to nutrient levels" evidence=IEP

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0042493 "response to drug" evidence=IEP

GO:0042802 "identical protein binding" evidence=IDA

GO:0046370 "fructose biosynthetic process" evidence=ISO

GO:0046686 "response to cadmium ion" evidence=IDA

GO:0046688 "response to copper ion" evidence=IDA

GO:0051160 "L-xylitol catabolic process" evidence=ISO

GO:0051164 "L-xylitol metabolic process" evidence=ISO

GO:0051287 "NAD binding" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

MGI|MGI:98266 Sord "sorbitol dehydrogenase" [Mus musculus (taxid:10090)]

 Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
 Identities = 170/353 (48%), Positives = 239/353 (67%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++  + G   ++++ + +P LGP DVL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct:     9 NLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVL 68

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
             GHE AG + KVG  VK L PGDRV        A+EPG+     ++CK GRYNL P + F 
Sbjct:    69 GHEAAGTVTKVGELVKHLKPGDRV--------AIEPGVPREVDEYCKIGRYNLTPTIFFC 120

Query:   138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
             ATPP  G+L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ G
Sbjct:   121 ATPPDDGNLCRFYKHNADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCG 180

Query:   198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQ 256
             AGP+G+VT+L A+A GA ++V+ D+   RL+ AKE+GAD  ++V     Q+IA +VE + 
Sbjct:   181 AGPVGMVTLLVAKAMGAAQVVVTDLSASRLTKAKEVGADFTIQVGKETPQEIASKVESL- 239

Query:   257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 316
               +G+  +V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AA+REVD+ GV
Sbjct:   240 --LGSKPEVTIECTGAESSVQTGIYATHSGGTLVIVGMGAEMVNLPLVHAAIREVDIKGV 297

Query:   317 FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 369
             FRY NTWP+ + +L S  ++VKPLVTHRF   +K VE AFET A+ G  +KVM
Sbjct:   298 FRYCNTWPMAISMLASKTLNVKPLVTHRFPL-EKAVE-AFET-AKKGVGLKVM 347

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=ISO;IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005929 "cilium" evidence=IEA

GO:0006060 "sorbitol metabolic process" evidence=IDA

GO:0006062 "sorbitol catabolic process" evidence=ISO

GO:0008270 "zinc ion binding" evidence=ISO

GO:0009725 "response to hormone stimulus" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0030317 "sperm motility" evidence=IDA

GO:0042802 "identical protein binding" evidence=ISO

GO:0042995 "cell projection" evidence=IEA

GO:0046370 "fructose biosynthetic process" evidence=ISO

GO:0046686 "response to cadmium ion" evidence=ISO

GO:0046688 "response to copper ion" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0051160 "L-xylitol catabolic process" evidence=ISO

GO:0051164 "L-xylitol metabolic process" evidence=ISO

GO:0051287 "NAD binding" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO;IDA

UNIPROTKB|Q58D31 SORD "Sorbitol dehydrogenase" [Bos taurus (taxid:9913)]

 Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
 Identities = 173/353 (49%), Positives = 240/353 (67%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++  + G   L+++ + +P  GP +VL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct:     8 NLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVL 67

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
             GHE +G + KVGS V+ L PGDRV        A+EPG      + CK GRYNL P + F 
Sbjct:    68 GHEASGTVVKVGSLVRHLQPGDRV--------AIEPGAPRETDEFCKIGRYNLSPTIFFC 119

Query:   138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
             ATPP  G+L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ G
Sbjct:   120 ATPPDDGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCG 179

Query:   198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQ 256
             AGPIGLV++LAA+A GA ++V+ D+   RLS AKE+GAD I+++S    Q+IA++VE + 
Sbjct:   180 AGPIGLVSLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILQISNESPQEIAKKVEGL- 238

Query:   257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 316
               +G+  +V+ +C G+  ++   + AT +GG + LVG+G    +VPL  AA REVD+ GV
Sbjct:   239 --LGSKPEVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGV 296

Query:   317 FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 369
             FRY NTWP+ + +L S  ++VKPLVTHRF   +K +E AFETS +G   +KVM
Sbjct:   297 FRYCNTWPMAISMLASKSVNVKPLVTHRFPL-EKALE-AFETSKKG-LGLKVM 346

GO:0030317 "sperm motility" evidence=ISS

GO:0031514 "motile cilium" evidence=ISS

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0051160 "L-xylitol catabolic process" evidence=IEA

GO:0046370 "fructose biosynthetic process" evidence=IEA

GO:0006062 "sorbitol catabolic process" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1PXG0 SORD "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
 Identities = 173/353 (49%), Positives = 236/353 (66%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N+   + G   L+++ + +P  GP +VL++M +VGICGSDVHY +  R  DF+VK+PMV+
Sbjct:     8 NLTLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFIVKKPMVL 67

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
             GHE +G + KVGS VK L  GDRV        A+EPG      + CK GRYNL P + F 
Sbjct:    68 GHEASGTVVKVGSLVKHLKSGDRV--------AIEPGALREMDEFCKIGRYNLSPSIFFC 119

Query:   138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
             ATPP  G+L     H AD C+KLPDNV+ EEGA+ EPLSVG+HACRRA I     VL+ G
Sbjct:   120 ATPPDDGNLCQFYKHNADFCYKLPDNVTYEEGALIEPLSVGIHACRRAGITLGNKVLVCG 179

Query:   198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQ 256
             AGPIGLVT++ A+A GA ++++ D+   RLS AKE+GAD ++++S    ++IA +VE + 
Sbjct:   180 AGPIGLVTLIVAKAMGAGQVLVTDLSASRLSKAKEVGADIVLQISKESPKEIASKVEDM- 238

Query:   257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 316
               +G   + + +C G+   + + + AT AGG + LVG+G    TVPLT A+ REVD+ GV
Sbjct:   239 --LGCKPEATIECTGVESAIQSGIYATRAGGTLVLVGLGSEMTTVPLTHASTREVDIKGV 296

Query:   317 FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 369
             FRY NTWP+ + +L S  ++VKPLVTHRF   +K +E AFET AR GT +KVM
Sbjct:   297 FRYCNTWPMAISMLASKAVNVKPLVTHRFPL-EKALE-AFET-ARKGTGLKVM 346

GO:0051287 "NAD binding" evidence=IEA

GO:0051160 "L-xylitol catabolic process" evidence=IEA

GO:0046370 "fructose biosynthetic process" evidence=IEA

GO:0030317 "sperm motility" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006062 "sorbitol catabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q00796 SORD "Sorbitol dehydrogenase" [Homo sapiens (taxid:9606)]

 Score = 824 (295.1 bits), Expect = 3.6e-82, P = 3.6e-82
 Identities = 171/353 (48%), Positives = 234/353 (66%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct:     9 NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 68

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
             GHE +G +EKVGS VK L PGDRV        A+EPG      + CK GRYNL P + F 
Sbjct:    69 GHEASGTVEKVGSSVKHLKPGDRV--------AIEPGAPRENDEFCKMGRYNLSPSIFFC 120

Query:   138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
             ATPP  G+L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ G
Sbjct:   121 ATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCG 180

Query:   198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQ 256
             AGPIG+VT+L A+A GA ++V+ D+   RLS AKEIGAD ++++S    Q+IA +VE   
Sbjct:   181 AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEG-- 238

Query:   257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 316
               +G   +V+ +C G   ++   + AT +GG + LVG+G    TVPL  AA+REVD+ GV
Sbjct:   239 -QLGCKPEVTIECTGAEASIQAGIYATRSGGNLVLVGLGSEMTTVPLLHAAIREVDIKGV 297

Query:   317 FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 369
             FRY NTWP+ + +L S  ++VKPLVTHRF   +K +E AFET  +G   +K+M
Sbjct:   298 FRYCNTWPVAISMLASKSVNVKPLVTHRFPL-EKALE-AFETFKKG-LGLKIM 347

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=ISS;IDA

GO:0008270 "zinc ion binding" evidence=ISS;IDA

GO:0006006 "glucose metabolic process" evidence=TAS

GO:0006062 "sorbitol catabolic process" evidence=IDA

GO:0051287 "NAD binding" evidence=IDA

GO:0030246 "carbohydrate binding" evidence=NAS

GO:0016020 "membrane" evidence=IDA

GO:0046370 "fructose biosynthetic process" evidence=IDA

GO:0051160 "L-xylitol catabolic process" evidence=IDA

GO:0051164 "L-xylitol metabolic process" evidence=IDA

GO:0005615 "extracellular space" evidence=TAS

GO:0030317 "sperm motility" evidence=ISS;NAS

GO:0031514 "motile cilium" evidence=ISS

UNIPROTKB|Q5R5F3 SORD "Sorbitol dehydrogenase" [Pongo abelii (taxid:9601)]

 Score = 824 (295.1 bits), Expect = 3.6e-82, P = 3.6e-82
 Identities = 170/353 (48%), Positives = 235/353 (66%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct:     9 NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEDGRIGNFIVKKPMVL 68

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
             GHE +G +EKVGS VK L PGDRV        A+EPG      + CK GRYNL P + F 
Sbjct:    69 GHEASGTVEKVGSLVKHLKPGDRV--------AIEPGAPRENDEFCKIGRYNLSPSIFFC 120

Query:   138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
             ATPP  G+L     H A  C+KLPDNV+ EEGAM EPLSVG+HACRR  +     VL+ G
Sbjct:   121 ATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGAMIEPLSVGIHACRRGGVTLGHKVLVCG 180

Query:   198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQ 256
             AGPIG+VT+L A+A GA ++V+ D+   RLS AKEIGAD ++++S    Q+IA +VE + 
Sbjct:   181 AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGL- 239

Query:   257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 316
               +G   +V+ +C G   ++   + AT +GG + LVG+G    T+PL  AA+REVD+ GV
Sbjct:   240 --LGCKPEVTIECTGAGASIQAGIYATHSGGTLVLVGLGSEMTTIPLLHAAIREVDIKGV 297

Query:   317 FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 369
             FRY NTWP+ + +L S  ++VKPL+THRF   +K +E AFET  +G   +K+M
Sbjct:   298 FRYCNTWPVAISMLASKSVNVKPLITHRFPL-EKALE-AFETFKKG-LGLKIM 347

GO:0030317 "sperm motility" evidence=ISS

GO:0031514 "motile cilium" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A8GLC6	TDH_SERP5	1, ., 1, ., 1, ., 1, 0, 3	0.3195	0.8494	0.9266	yes	no
Q64442	DHSO_MOUSE	1, ., 1, ., 1, ., 1, 4	0.4788	0.9139	0.9523	yes	no
Q14IB6	TDH_FRAT1	1, ., 1, ., 1, ., 1, 0, 3	0.3173	0.8413	0.8917	yes	no
A2QY54	XYL2_ASPNC	1, ., 1, ., 1, ., 9	0.4055	0.9059	0.9413	yes	no
Q5ARL6	XYL2_EMENI	1, ., 1, ., 1, ., 9	0.4067	0.9166	0.9498	yes	no
A0Q5K3	TDH_FRATN	1, ., 1, ., 1, ., 1, 0, 3	0.3143	0.8413	0.8917	yes	no
P27867	DHSO_RAT	1, ., 1, ., 1, ., 1, 4	0.4845	0.9139	0.9523	yes	no
A4IZ92	TDH_FRATW	1, ., 1, ., 1, ., 1, 0, 3	0.3173	0.8413	0.8917	yes	no
Q92MT4	XYLD_RHIME	1, ., 1, ., 1, ., 9	0.4089	0.8037	0.8641	yes	no
Q58D31	DHSO_BOVIN	1, ., 1, ., 1, ., 1, 4	0.4858	0.9112	0.9522	yes	no
B2SDJ2	TDH_FRATM	1, ., 1, ., 1, ., 1, 0, 3	0.3173	0.8413	0.8917	yes	no
Q07786	DHSO2_YEAST	1, ., 1, ., 1, ., 1, 4	0.3933	0.9247	0.9635	yes	no
Q48AM4	TDH_COLP3	1, ., 1, ., 1, ., 1, 0, 3	0.3235	0.8548	0.9325	yes	no
Q00796	DHSO_HUMAN	1, ., 1, ., 1, ., 1, 4	0.4788	0.9139	0.9523	yes	no
Q0BKV5	TDH_FRATO	1, ., 1, ., 1, ., 1, 0, 3	0.3173	0.8413	0.8917	yes	no
A1JHX8	TDH_YERE8	1, ., 1, ., 1, ., 1, 0, 3	0.3215	0.8467	0.9237	yes	no
Q5GN51	XYL2_ASPNG	1, ., 1, ., 1, ., 9	0.4055	0.9059	0.9413	yes	no
P36624	DHSO_SCHPO	1, ., 1, ., 1, ., 1, 4	0.4128	0.8360	0.8638	yes	no
Q98D10	XYLD_RHILO	1, ., 1, ., 1, ., 9	0.3791	0.8602	0.9195	yes	no
Q1PSI9	IDND_VITVI	1, ., 1, ., 1, ., n, 8	0.7786	0.9758	0.9918	no	no
B0TYR8	TDH_FRAP2	1, ., 1, ., 1, ., 1, 0, 3	0.3203	0.8413	0.8917	yes	no
Q2A282	TDH_FRATH	1, ., 1, ., 1, ., 1, 0, 3	0.3173	0.8413	0.8917	yes	no
P35497	DHSO1_YEAST	1, ., 1, ., 1, ., 1, 4	0.3961	0.9247	0.9635	yes	no
P22144	XYL2_PICST	1, ., 1, ., 1, ., 9	0.3494	0.9112	0.9338	yes	no
A7NDM9	TDH_FRATF	1, ., 1, ., 1, ., 1, 0, 3	0.3173	0.8413	0.8917	yes	no
Q4WAU7	XYL2_ASPFU	1, ., 1, ., 1, ., 9	0.4197	0.9139	0.9497	yes	no
Q06004	DHSO_BACSU	1, ., 1, ., 1, ., 1, 4	0.4114	0.8602	0.9065	yes	no
Q5NGW4	TDH_FRATT	1, ., 1, ., 1, ., 1, 0, 3	0.3173	0.8413	0.8917	yes	no
Q5R5F3	DHSO_PONAB	1, ., 1, ., 1, ., 1, 4	0.4760	0.9139	0.9523	yes	no
Q8U7Y1	XYLD_AGRT5	1, ., 1, ., 1, ., 9	0.3780	0.8333	0.8857	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.983
4th Layer	1.1.1.14	LOW CONFIDENCE prediction!
4th Layer	1.1.1.n8	0.979

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	372
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	0.0
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	0.0
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	4e-97
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	2e-89
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	2e-88
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	4e-87
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	5e-81
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	7e-80
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	6e-74
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	3e-64
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	4e-63
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	9e-62
cd05281	341	cd05281, TDH, Threonine dehydrogenase	3e-61
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	3e-60
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	7e-60
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	1e-58
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	2e-57
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	1e-55
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	1e-55
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	3e-54
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	9e-54
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	7e-53
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	2e-51
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	7e-50
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	3e-49
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	4e-49
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	6e-49
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	7e-48
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	2e-47
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	2e-43
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	4e-43
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	7e-43
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	1e-42
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	2e-42
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	2e-42
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	3e-42
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	5e-41
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	1e-40
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	1e-40
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	2e-39
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	4e-39
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	6e-39
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	2e-37
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	6e-36
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	1e-35
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	2e-35
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	7e-35
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	9e-34
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	2e-33
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	2e-31
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	8e-31
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	3e-30
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	7e-28
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	9e-28
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	6e-27
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	3e-26
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	2e-25
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	4e-25
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	7e-25
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	2e-24
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	3e-24
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	1e-23
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	2e-23
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	4e-23
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	4e-23
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	8e-23
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	9e-23
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	1e-22
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	1e-22
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	2e-22
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	2e-22
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	2e-22
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	5e-20
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	3e-19
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	1e-18
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	3e-18
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	4e-18
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	5e-18
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	9e-18
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	6e-17
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	1e-16
cd08238	410	cd08238, sorbose_phosphate_red, L-sorbose-1-phosph	1e-16
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	3e-16
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	3e-15
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	6e-15
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	2e-13
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	3e-13
smart00829	287	smart00829, PKS_ER, Enoylreductase	3e-12
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	5e-12
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	9e-12
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	1e-11
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	1e-11
cd08237	341	cd08237, ribitol-5-phosphate_DH, ribitol-5-phospha	2e-11
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	3e-11
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	4e-09
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	9e-09
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	2e-08
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	2e-08
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	3e-08
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	4e-08
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	4e-08
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	2e-07
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	3e-07
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	5e-07
TIGR01202	308	TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacter	2e-06
pfam13602	129	pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenas	9e-06
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	8e-05
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	2e-04
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	3e-04
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	0.001
COG2226	238	COG2226, UbiE, Methylase involved in ubiquinone/me	0.002
PRK06392	326	PRK06392, PRK06392, homoserine dehydrogenase; Prov	0.003

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score =  735 bits (1900), Expect = 0.0
 Identities = 321/372 (86%), Positives = 339/372 (91%), Gaps = 8/372 (2%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS GE    EE NMAAWL+GVNTLKIQPF+LP LGP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSSGEGSGVEEENMAAWLVGVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRC 120
           LKT+RCADFVVKEPMVIGHECAG+IE+VGSEVK LV GDRV        ALEPGISCWRC
Sbjct: 61  LKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRV--------ALEPGISCWRC 112

Query: 121 DHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH 180
           + CK GRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP+NVSLEEGAMCEPLSVGVH
Sbjct: 113 NLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVH 172

Query: 181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 240
           ACRRANIGPETNVL+MGAGPIGLVTMLAARAFGAPRIVIVDVDD RLSVAK++GAD IV 
Sbjct: 173 ACRRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVL 232

Query: 241 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT 300
           VSTN++D+  EVE+IQKAMG GIDVSFDC G NKTMSTAL AT AGGKVCLVGMGH+EMT
Sbjct: 233 VSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMT 292

Query: 301 VPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 360
           VPLTPAA REVDVVGVFRY+NTWPLCLE LRSGKIDVKPL+THRFGFSQKEVEEAFETSA
Sbjct: 293 VPLTPAAAREVDVVGVFRYRNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSA 352

Query: 361 RGGTAIKVMFNL 372
           RGG AIKVMFNL
Sbjct: 353 RGGNAIKVMFNL 364

Length = 364

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score =  520 bits (1343), Expect = 0.0
 Identities = 196/354 (55%), Positives = 244/354 (68%), Gaps = 14/354 (3%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           AA L G   L+++   +P  GP +VLVR++AVGICGSDVHY K  R  DFVVKEPMV+GH
Sbjct: 1   AAVLHGPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGH 60

Query: 80  ECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 139
           E AG +  VGS V  L  GDRV        A+EPG+ C  C+ CK GRYNLCP+M+F AT
Sbjct: 61  ESAGTVVAVGSGVTHLKVGDRV--------AIEPGVPCRTCEFCKSGRYNLCPDMRFAAT 112

Query: 140 PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAG 199
           PPV G+L   V HPAD C KLPDNVSLEEGA+ EPLSVGVHACRRA + P   VL+ GAG
Sbjct: 113 PPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGVHACRRAGVRPGDTVLVFGAG 172

Query: 200 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 259
           PIGL+T   A+AFGA ++V+ D+D  RL  AKE+GA + V V T  +D  E  EKI + +
Sbjct: 173 PIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT--EDTPESAEKIAELL 230

Query: 260 GT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR 318
           G  G DV  +C G    + TA+ AT  GG V LVGMG  E+T+PL+ A++RE+D+ GVFR
Sbjct: 231 GGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFR 290

Query: 319 YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFN 371
           Y NT+P  +ELL SGK+DVKPL+THRF    ++  EAFET+A+G    IKV+  
Sbjct: 291 YANTYPTAIELLASGKVDVKPLITHRFPL--EDAVEAFETAAKGKKGVIKVVIE 342

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score =  292 bits (749), Expect = 4e-97
 Identities = 129/349 (36%), Positives = 181/349 (51%), Gaps = 21/349 (6%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
               L+++    P  GP +V VR+ A GICGSD+HY +        ++EPMV+GHE +GV
Sbjct: 5   AAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGV 64

Query: 85  IEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA----TP 140
           +E VG  V  L PG RV        A+ P   C  CD+C+ GR NLC  M+F       P
Sbjct: 65  VEAVGPGVTGLAPGQRV--------AVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFP 116

Query: 141 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGP 200
            V G     +V  A  C  LPD +SL   A+ EPL+V +HA  RA       VL+ GAGP
Sbjct: 117 HVQGGFREYLVVDASQCVPLPDGLSLRRAALAEPLAVALHAVNRAGDLAGKRVLVTGAGP 176

Query: 201 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 260
           IG + + AAR  GA  IV  D+ D  L+VA+ +GAD  V       ++A +      A  
Sbjct: 177 IGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETV-------NLARDPLAAYAADK 229

Query: 261 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYK 320
              DV F+ +G    +++AL     GG V  VGM    + +PL     +E+D+ G FR+ 
Sbjct: 230 GDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFD 289

Query: 321 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 369
           + +   + LL +G+IDV+PL+T  F     E  EAF  +A    ++KV 
Sbjct: 290 DEFAEAVRLLAAGRIDVRPLITAVFPLE--EAAEAFALAADRTRSVKVQ 336

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  272 bits (697), Expect = 2e-89
 Identities = 135/367 (36%), Positives = 196/367 (53%), Gaps = 39/367 (10%)

Query: 19  MAAWLL-GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVH-YLKTLRCADFVVKEPMV 76
           M A +L G   L+ +    P  GP +VLV++KA GICGSD+  YL T          P+V
Sbjct: 1   MKALVLTGPGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGT-----GAYHPPLV 55

Query: 77  IGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF 136
           +GHE +G +E+VGS V  L  GDRV + P     L P   C +C++CK G Y+LC    +
Sbjct: 56  LGHEFSGTVEEVGSGVDDLAVGDRVAVNP-----LLP---CGKCEYCKKGEYSLCSNYDY 107

Query: 137 FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIM 196
             +    G+ A  V  PA    K+PD+V  EE AM EP +V +HA R A I     V+++
Sbjct: 108 IGSR-RDGAFAEYVSVPARNLIKIPDHVDYEEAAMIEPAAVALHAVRLAGITLGDTVVVI 166

Query: 197 GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ 256
           GAG IGL+ +   +  GA R++ VD+DD +L+VA+E+GAD+ +          E+VEK++
Sbjct: 167 GAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE------EDVEKVR 220

Query: 257 KAM-GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-----RE 310
           +   G G D+  + AG   T+  AL     GGKV LVG+ + ++T  L+  A      +E
Sbjct: 221 ELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVT--LSEEAFEKILRKE 278

Query: 311 VDVVGVFRYKNT------WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT 364
           + + G +   +       W   L+LL SGKI V+PL+THR      +   AFE  A    
Sbjct: 279 LTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLE--DGPAAFERLADREE 336

Query: 365 A-IKVMF 370
              KV+ 
Sbjct: 337 FSGKVLL 343

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  270 bits (692), Expect = 2e-88
 Identities = 120/362 (33%), Positives = 174/362 (48%), Gaps = 26/362 (7%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           A   +G   ++++    P  GP DVL+R+ A GICGSD+H  +      FV    +++GH
Sbjct: 4   AVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGE--PFVPPGDIILGH 61

Query: 80  ECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 139
           E  G + +VG                GDRV +EP I C  C +C+ G YNLC    F+  
Sbjct: 62  EFVGEVVEVG---------VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGY 112

Query: 140 ----PPVHGSLANQVVHPAD-LCFKLPDNVSLEEGAMCEPLSVGVHAC-RRANIGPETNV 193
                 + G  A  V  PAD    KLPD +  E  A+ EPL+   H    RA + P   V
Sbjct: 113 AGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAERAAVRPGGTV 172

Query: 194 LIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE 253
           +++GAGPIGL+ +  A+  GA  +++VD    RL +AKE G  ++V    N  +     E
Sbjct: 173 VVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVV---VNPSEDDAGAE 229

Query: 254 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVD 312
            ++   G G DV  +  G    +  AL A   GG V +VG+   E         V +E+ 
Sbjct: 230 ILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELT 289

Query: 313 VVGVFR--YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET-SARGGTAIKVM 369
           + G  R   +  +   L+LL SGKID + L+THR      +  EA+E  + R   AIKV+
Sbjct: 290 LRGSLRPSGREDFERALDLLASGKIDPEKLITHRLPLD--DAAEAYELFADRKEEAIKVV 347

Query: 370 FN 371
             
Sbjct: 348 LK 349

Length = 350

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  266 bits (682), Expect = 4e-87
 Identities = 126/354 (35%), Positives = 186/354 (52%), Gaps = 24/354 (6%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           A    G   L+++   +P  GP +VL+++ A GICG+D+H  +     +F    P+V GH
Sbjct: 3   ALVYEGPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYE----GEFGAAPPLVPGH 58

Query: 80  ECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 139
           E AGV+  VGS+V     GDRV        A++P I C  C +C+ GR NLC  +     
Sbjct: 59  EFAGVVVAVGSKVTGFKVGDRV--------AVDPNIYCGECFYCRRGRPNLCENLTAVGV 110

Query: 140 PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAG 199
              +G  A  VV PA   +K+PDN+S EE A+ EPLS  VH      I P  +VL+ GAG
Sbjct: 111 T-RNGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDLLGIKPGDSVLVFGAG 169

Query: 200 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 259
           PIGL+     +  GA R+ + + ++ +L +AK++GA   V          E+ E  ++  
Sbjct: 170 PIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETV------DPSREDPEAQKEDN 223

Query: 260 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVF 317
             G DV  +  G+ KT+  A+     GG V + G+   +  V ++P  +  +E+ ++G F
Sbjct: 224 PYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSF 283

Query: 318 RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 371
               T+P  + LL SGKIDVK LV+HR      EV EA E   R G A+KV+  
Sbjct: 284 INPYTFPRAIALLESGKIDVKGLVSHRLPLE--EVPEALE-GMRSGGALKVVVV 334

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  250 bits (642), Expect = 5e-81
 Identities = 134/364 (36%), Positives = 197/364 (54%), Gaps = 39/364 (10%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           AA L G N ++++   +P  GP +VLV+++A GICG+DV   K +R     +K P ++GH
Sbjct: 3   AAVLHGPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDV---KKIRGGHTDLKPPRILGH 59

Query: 80  ECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK--FF 137
           E AG I +VG  V     GDRV       VA  P + C  C +C  G  N+CP  K    
Sbjct: 60  EIAGEIVEVGDGVTGFKVGDRVF------VA--PHVPCGECHYCLRGNENMCPNYKKFGN 111

Query: 138 ATPPVHGSLANQVVHPA-----DLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETN 192
                 G  A  V  PA         KLPDNVS EE A+ EPL+  ++A R+A I P   
Sbjct: 112 LYD---GGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCINAQRKAGIKPGDT 168

Query: 193 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV 252
           VL++GAGPIGL+  + A+A GA ++++ D++++RL  AK++GAD  +  +   +D+ E+V
Sbjct: 169 VLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAE--EDLVEKV 226

Query: 253 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV--RE 310
            ++    G G DV     G  +  + AL     GG++   G      TV + P  +  RE
Sbjct: 227 RELTD--GRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYRE 284

Query: 311 VDVVGVFR-----YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTA 365
           + + G +      YK      LEL+ SGKIDVK L+THRF    +++EEAFE  A  G +
Sbjct: 285 ITITGSYAASPEDYKEA----LELIASGKIDVKDLITHRFPL--EDIEEAFEL-AADGKS 337

Query: 366 IKVM 369
           +K++
Sbjct: 338 LKIV 341

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  248 bits (635), Expect = 7e-80
 Identities = 129/365 (35%), Positives = 187/365 (51%), Gaps = 35/365 (9%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVH-YLKTLRCAD---FVVKE-- 73
           AA   G   ++++    P + P +V +++   GICGSD+H YL      D   F+  E  
Sbjct: 3   AARYHGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYL------DGPIFIPTEGH 56

Query: 74  --------PMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKG 125
                   P+ +GHE +GV+ +VGS V     GDRV         +EP I C  C  CK 
Sbjct: 57  PHLTGETAPVTLGHEFSGVVVEVGSGVTGFKVGDRV--------VVEPTIKCGTCGACKR 108

Query: 126 GRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRA 185
           G YNLC  + F       G  A  VV PA    KLPDNV LEE A+ EPL+V  HA RR+
Sbjct: 109 GLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAVAWHAVRRS 168

Query: 186 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL 245
              P    L++GAGPIGL+T+LA +A GA +I++ +  + R  +A+E+GA  ++  +   
Sbjct: 169 GFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTE-- 226

Query: 246 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP 305
            D+  EV K+    G G+DVSFDCAG+  T+ TA+ A    G    V +    ++     
Sbjct: 227 VDVVAEVRKLTG--GGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPND 284

Query: 306 AAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-G 363
             ++E  + G   Y +  +   ++LL SGKID +PL+T R       VE+ FE       
Sbjct: 285 LVLKEKTLTGSICYTREDFEEVIDLLASGKIDAEPLITSRIPLEDI-VEKGFEELINDKE 343

Query: 364 TAIKV 368
             +K+
Sbjct: 344 QHVKI 348

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  232 bits (594), Expect = 6e-74
 Identities = 128/348 (36%), Positives = 189/348 (54%), Gaps = 26/348 (7%)

Query: 26  VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI 85
              L++     P  G  +VLVR+K VGICGSD+H        +     P ++GHE +G +
Sbjct: 9   PGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLH---IYHGRNPFASYPRILGHELSGEV 65

Query: 86  EKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-- 143
            +VG  V  L  GDRV +        +P ISC  C  C+ GR N C  ++      VH  
Sbjct: 66  VEVGEGVAGLKVGDRVVV--------DPYISCGECYACRKGRPNCCENLQVLG---VHRD 114

Query: 144 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGL 203
           G  A  +V PAD    +P+ +SL++ A+ EPL++G HA RRA +     VL++GAGPIGL
Sbjct: 115 GGFAEYIVVPAD-ALLVPEGLSLDQAALVEPLAIGAHAVRRAGVTAGDTVLVVGAGPIGL 173

Query: 204 VTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 263
             +  A+A GA R+++VD+DD RL  A+E+GAD+ + V    +D+A  + ++    G G 
Sbjct: 174 GVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD--EDVAARLREL--TDGEGA 228

Query: 264 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT- 322
           DV  D  G   +M  A+     GG+V LVG+    +T P      +E+ ++G        
Sbjct: 229 DVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATRED 288

Query: 323 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET-SARGGTAIKVM 369
           +P  ++LL SGK+D + L+THRF F   +V EAF+   A  G  IKV+
Sbjct: 289 FPDVIDLLESGKVDPEALITHRFPFE--DVPEAFDLWEAPPGGVIKVL 334

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  205 bits (523), Expect = 3e-64
 Identities = 94/292 (32%), Positives = 146/292 (50%), Gaps = 25/292 (8%)

Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVT 102
           +VLVR++A G+CG+D+H  +         K P+++GHE AGV+ +VG  V          
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGY--PPPPKLPLILGHEGAGVVVEVGPGVT--------G 50

Query: 103 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 162
           +  GDRV + P + C  C+ C+                 + G  A  VV PAD    LPD
Sbjct: 51  VKVGDRVVVLPNLGCGTCELCRE-----LCPGGGILGEGLDGGFAEYVVVPADNLVPLPD 105

Query: 163 NVSLEEGAM-CEPLSVGVHACRRAN-IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV 220
            +SLEE A+  EPL+   HA RRA  + P   VL++GAG +GL+    A+A GA R+++ 
Sbjct: 106 GLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGA-RVIVT 164

Query: 221 DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTAL 280
           D  D +L +AKE+GAD+++             E+++   G G DV  D  G  +T++ AL
Sbjct: 165 DRSDEKLELAKELGADHVIDYKEED-----LEEELRLTGGGGADVVIDAVGGPETLAQAL 219

Query: 281 GATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELL 330
                GG++ +VG          L     +E+ ++G     +  +   L+LL
Sbjct: 220 RLLRPGGRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDLL 271

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score =  203 bits (519), Expect = 4e-63
 Identities = 110/310 (35%), Positives = 159/310 (51%), Gaps = 24/310 (7%)

Query: 30  KIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG 89
           +++    P  GP +VL+++ A GICGSD+H     +     V+ P+V+GHE +G I +VG
Sbjct: 15  ELREVPEPEPGPGEVLIKVAAAGICGSDLH---IYKGDYDPVETPVVLGHEFSGTIVEVG 71

Query: 90  SEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQ 149
            +V+    GDRV               C RC +C+ G YNLCP  K   T    G  A  
Sbjct: 72  PDVEGWKVGDRVVSETTFST-------CGRCPYCRRGDYNLCPHRKGIGTQ-ADGGFAEY 123

Query: 150 VVHPADLCFKLPDNVSLEEGAMCEPLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLA 208
           V+ P +   +LP+N+SLE  A+ EPL+V VHA   R+ I P   V++ G GPIGL+    
Sbjct: 124 VLVPEESLHELPENLSLEAAALTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQV 183

Query: 209 ARAFGAPRIVIVDV--DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 266
           A+  GA  +V+V    D+ RL VAKE+GAD    V+   +D+AE V +I    G G DV 
Sbjct: 184 AKLQGA-TVVVVGTEKDEVRLDVAKELGAD---AVNGGEEDLAELVNEITD--GDGADVV 237

Query: 267 FDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVFRYKNT-W 323
            +C+G    +  AL     GG++  VG+        +    +  +E+ V+G        W
Sbjct: 238 IECSGAVPALEQALELLRKGGRIVQVGIFGPLA-ASIDVERIIQKELSVIGSRSSTPASW 296

Query: 324 PLCLELLRSG 333
              L LL SG
Sbjct: 297 ETALRLLASG 306

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score =  201 bits (513), Expect = 9e-62
 Identities = 108/339 (31%), Positives = 175/339 (51%), Gaps = 24/339 (7%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
           P  GP DVL+++K   ICG+DVH       A   +  PMV+GHE  G + +VGSEV    
Sbjct: 21  PEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80

Query: 97  PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVVHPA 154
            GDRV+         E  I C  C +C+ GR +LC   K      V+  G+ A  +V PA
Sbjct: 81  VGDRVSG--------EGHIVCGHCRNCRAGRRHLCRNTKGVG---VNRPGAFAEYLVIPA 129

Query: 155 DLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA 214
              +K+PD++  +  A+ +P    VH     ++  E  VLI GAGPIG++    A+  GA
Sbjct: 130 FNVWKIPDDIPDDLAAIFDPFGNAVHTALSFDLVGED-VLITGAGPIGIMAAAVAKHVGA 188

Query: 215 PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK 274
             +VI DV++YRL +A+++GA   V V+   +D+ + + ++   M  G DV  + +G   
Sbjct: 189 RHVVITDVNEYRLELARKMGATRAVNVAK--EDLRDVMAEL--GMTEGFDVGLEMSGAPS 244

Query: 275 TMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYK--NTWPLCLELLRS 332
                L     GG++ ++G+   +M +       + + + G++  +   TW     LL+S
Sbjct: 245 AFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQS 304

Query: 333 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 371
           G +D+ P++THRF     + ++ FE   R G + KV+ +
Sbjct: 305 G-LDLSPIITHRFPI--DDFQKGFEA-MRSGQSGKVILD 339

Length = 341

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score =  199 bits (509), Expect = 3e-61
 Identities = 110/349 (31%), Positives = 177/349 (50%), Gaps = 25/349 (7%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
            ++    +P  GP +VL+++ A  ICG+DVH  +    A   +K P++ GHE AG + +V
Sbjct: 13  AELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEV 72

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSL 146
           G  V  +  GD V+         E  I C +C  C+ G Y++C   K      V   G  
Sbjct: 73  GEGVTRVKVGDYVSA--------ETHIVCGKCYQCRTGNYHVCQNTKILG---VDTDGCF 121

Query: 147 ANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTM 206
           A  VV P +  +K   ++  E  ++ EPL   VH     ++    +VLI G GPIGL+ +
Sbjct: 122 AEYVVVPEENLWKNDKDIPPEIASIQEPLGNAVHTVLAGDV-SGKSVLITGCGPIGLMAI 180

Query: 207 LAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 266
             A+A GA  ++  D + YRL +AK++GAD ++      +D+  EV+ +    GTG+DV 
Sbjct: 181 AVAKAAGASLVIASDPNPYRLELAKKMGADVVINPRE--EDVV-EVKSVTD--GTGVDVV 235

Query: 267 FDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVFRYK--NTW 323
            + +G  K +   L A   GG+V ++G+    + + L    + + + V G+   K   TW
Sbjct: 236 LEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETW 295

Query: 324 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 372
                LL+SGK+D+ P++TH+     ++ EEAFE   R G   KV+   
Sbjct: 296 YQVSALLKSGKVDLSPVITHKLPL--EDFEEAFEL-MRSGKCGKVVLYP 341

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score =  197 bits (502), Expect = 3e-60
 Identities = 118/367 (32%), Positives = 186/367 (50%), Gaps = 35/367 (9%)

Query: 11  KEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV 70
           K         A L  V         +P  GP +VL+++ A  ICG+DVH       A   
Sbjct: 4   KTKPGY---GAELTEV--------PVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSR 52

Query: 71  VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNL 130
           +K P V+GHE AG +  +G  V+    G +V    GD V++E  I C +C  C+ G+Y++
Sbjct: 53  IKPPQVVGHEVAGEVVGIGPGVE----GIKV----GDYVSVETHIVCGKCYACRRGQYHV 104

Query: 131 CPEMKFFA--TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIG 188
           C   K F   T    G  A   V PA   +K P ++  E   + EPL   VH      I 
Sbjct: 105 CQNTKIFGVDTD---GCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTVLAGPIS 161

Query: 189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 248
            ++ VL+ GAGPIGL+ +  A+A GA  +++ D ++YRL +AK++GA  +V      +D+
Sbjct: 162 GKS-VLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK--EDV 218

Query: 249 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV 308
            +EV  +    G G+DV  + +G  K +   L A   GG+V L+G+   ++T+  T   +
Sbjct: 219 VKEVADL--TDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVI 276

Query: 309 -REVDVVGVFRYK--NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTA 365
            + + + G+       TW     L++SGK+D+ P++TH+F F   + E+ FE   R G  
Sbjct: 277 FKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKFKF--DKFEKGFE-LMRSGQT 333

Query: 366 IKVMFNL 372
            KV+ +L
Sbjct: 334 GKVILSL 340

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  196 bits (500), Expect = 7e-60
 Identities = 114/362 (31%), Positives = 176/362 (48%), Gaps = 34/362 (9%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
            A   G  T++++ F +P  GP +VL+R+KA G+CGSD+HY            + ++ GH
Sbjct: 3   GAVFPGDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYY--YHGHRAPAYQGVIPGH 60

Query: 80  ECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 139
           E AGV+  VG  V     GDRV +             C  C +C+ G   LC   +    
Sbjct: 61  EPAGVVVAVGPGVTHFRVGDRVMVYHYV--------GCGACRNCRRGWMQLCTSKRAAYG 112

Query: 140 PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV----HACRRANIGPETNVLI 195
               G  A  ++ P      LPD++S  +GA+   L  G+    HA RR  +     VL+
Sbjct: 113 WNRDGGHAEYMLVPEKTLIPLPDDLSFADGAL---LLCGIGTAYHALRRVGVSGRDTVLV 169

Query: 196 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 255
           +GAGP+GL  ++ ARA GA  ++ VD    RL +AK +GAD ++      QD  +E+ ++
Sbjct: 170 VGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINS---GQDDVQEIREL 226

Query: 256 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV---REVD 312
               G G DV+ +C+G       AL A    G++ LVG G     + +  +     ++  
Sbjct: 227 TS--GAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGG---ELTIEVSNDLIRKQRT 281

Query: 313 VVGVFRYKNTWPL--CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 370
           ++G + Y +   +  C E L   K++V  LVTHRFG  Q    EA+   A+G +  KV+F
Sbjct: 282 LIGSW-YFSVPDMEECAEFLARHKLEVDRLVTHRFGLDQ--APEAYALFAQGES-GKVVF 337

Query: 371 NL 372
             
Sbjct: 338 VF 339

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score =  193 bits (492), Expect = 1e-58
 Identities = 115/360 (31%), Positives = 169/360 (46%), Gaps = 30/360 (8%)

Query: 20  AAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           A   LG   + ++    P + GP+D +VR+ A  ICGSD+H     R      K  M++G
Sbjct: 3   ALVYLGPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLH---IYRGGVPGAKHGMILG 59

Query: 79  HECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLC----PEM 134
           HE  G + +VGS+VK L PGDRV+ VP           C RC  C+ G +  C       
Sbjct: 60  HEFVGEVVEVGSDVKRLKPGDRVS-VPCI-------TFCGRCRFCRRGYHAHCENGLWGW 111

Query: 135 KFFATPPVHGSLANQVVHP-ADL-CFKLPDNVSLEEGAMC-EPLSVGVHACRRANIGPET 191
           K        G  A  V  P AD+   K+PD +  E+  M  + L  G H    A I P +
Sbjct: 112 KLGNRID--GGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGAELAGIKPGS 169

Query: 192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE 251
            V ++GAGP+GL  +  AR  GA RI+ VD +  RL +AKE GA +I  ++    DI E+
Sbjct: 170 TVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDI--INPKNGDIVEQ 227

Query: 252 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAAVRE 310
           + ++    G G+D   +  G  +T   A+     GG +  VG+ G  +    L     + 
Sbjct: 228 ILELTG--GRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKN 285

Query: 311 VDV-VGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET-SARGGTAIKV 368
           +    G+   +   P  L+L+  GKID   L+THRF      + +A+     +    IKV
Sbjct: 286 LTFKTGLVPVRARMPELLDLIEEGKIDPSKLITHRFPLDD--ILKAYRLFDNKPDGCIKV 343

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score =  189 bits (483), Expect = 2e-57
 Identities = 106/330 (32%), Positives = 157/330 (47%), Gaps = 23/330 (6%)

Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVT 102
             LV++   GICGSD+HY +  +  +FV+K PMV+GHE  G I    S       G    
Sbjct: 29  GTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHSDS------SG---- 78

Query: 103 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA----TPPVHGSLANQVVHPADLCF 158
           L  G  VA+ P   C  C +C     N C  M+FF      P V G      V     C 
Sbjct: 79  LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCI 138

Query: 159 KLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIV 218
             P+    +  A  EPL+V +HA  +A       V + G GPIG + + A +  GA  IV
Sbjct: 139 PYPEKADEKVMAFAEPLAVAIHAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIV 198

Query: 219 IVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMST 278
             DV    LS+A+E+GAD +V    N Q+  ++++  +   G   DVSF+ +G   +++T
Sbjct: 199 CADVSPRSLSLAREMGADKLV----NPQN--DDLDHYKAEKGY-FDVSFEVSGHPSSINT 251

Query: 279 ALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVK 338
            L  T A G +  VGMG      P+    V+E+ + G FR+   +   +  L +G I+  
Sbjct: 252 CLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWLANGVINPL 311

Query: 339 PLVTHRFGFSQKEVEEAFETSARGGTAIKV 368
           PL++  + F+   +EEA   +     A KV
Sbjct: 312 PLLSAEYPFTD--LEEALIFAGDKTQAAKV 339

Length = 343

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  185 bits (472), Expect = 1e-55
 Identities = 114/360 (31%), Positives = 171/360 (47%), Gaps = 30/360 (8%)

Query: 19  MAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL-KTLRCADFVVKEP 74
           M AW         L ++   +P  GP +VLV++KA G+C SD+H L   +     + K P
Sbjct: 1   MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVP---TLTKLP 57

Query: 75  MVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM 134
           + +GHE AG + +VG+ V     GDRV        A+   I C  C  C+ GR NLC   
Sbjct: 58  LTLGHEIAGTVVEVGAGVTNFKVGDRV--------AVPAVIPCGACALCRRGRGNLCLNQ 109

Query: 135 KFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGVHAC-RRANIGPETN 192
                  + G  A  +V PA     +PD V   + A   + +    HA  R   + P   
Sbjct: 110 GMPGLG-IDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGET 168

Query: 193 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV 252
           VL++G G +GL  +  A+A GA  ++ VD+ + +L +AKE+GAD   +V  +L D     
Sbjct: 169 VLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGAD---EVLNSLDDSP--K 222

Query: 253 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD 312
           +K    +G G DV FD  G   T   A  A   GG++ +VG+G  ++TV L+    RE+ 
Sbjct: 223 DKKAAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELR 282

Query: 313 VVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 371
           ++G F       P  L+L+  GK+D  P V  R      E+ E  E   +G    +V+  
Sbjct: 283 IIGSFGGTPEDLPEVLDLIAKGKLD--PQVETR---PLDEIPEVLERLHKGKVKGRVVLV 337

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  185 bits (471), Expect = 1e-55
 Identities = 101/339 (29%), Positives = 167/339 (49%), Gaps = 42/339 (12%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF-VVKEPMVIGHECAGVIEK 87
           L+I+   +P  GP +VL++++A G+C +D+H  K     D+ V K P++ GHE  G + +
Sbjct: 16  LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAK----GDWPVPKLPLIPGHEIVGTVVE 71

Query: 88  VGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 147
           VG  V  L  GDRV +           ISC  C++C+ G  NLCP  +        G  A
Sbjct: 72  VGEGVTGLKVGDRVGVGW-------LVISCGECEYCRSGNENLCPN-QKITGYTTDGGYA 123

Query: 148 NQVVHPADLCFKLPDNVSLEEGAMCEPLS-VGV---HACRRANIGPETNVLIMGAGPIGL 203
             VV PA    K+P+ + L E A   PL   G+    A ++AN+ P   V ++GAG +G 
Sbjct: 124 EYVVVPARYVVKIPEGLDLAEAA---PLLCAGITTYRALKKANVKPGKWVAVVGAGGLGH 180

Query: 204 VTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 263
           + +  A+A GA  ++ +   + +L +AK++GAD++  ++++  D  E V++I        
Sbjct: 181 MAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHV--INSSDSDALEAVKEI-------A 230

Query: 264 DVSFDCAGLNKTMSTALGATCAGGKVCLVGM--GHHEMTVPLTPAAVREVDVVG--VFRY 319
           D   D  G   T+  +L A   GG + LVG+  G     +P     ++E+ +VG  V   
Sbjct: 231 DAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTR 289

Query: 320 KNTWPLCLELLR-SGKIDVKPLVTHRFGFSQKEVEEAFE 357
            +      E L  + +  +KP +         E+ EA+E
Sbjct: 290 ADL----EEALDFAAEGKIKPEILETIPLD--EINEAYE 322

Length = 339

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  182 bits (464), Expect = 3e-54
 Identities = 114/379 (30%), Positives = 163/379 (43%), Gaps = 56/379 (14%)

Query: 20  AAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           AA L  V   L+I+  EL   GP +VLVR+ A G+C SD+H +      D     P V+G
Sbjct: 3   AAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVT----GDLPAPLPAVLG 58

Query: 79  HECAGVIEKVGSEVKTLVPGDRV--TLVPGDRVALEPGISCWRCDHCKGGRYNLCPE--- 133
           HE AGV+E+VG  V  + PGD V  + +P          +C  C +C  G+ NLC     
Sbjct: 59  HEGAGVVEEVGPGVTGVKPGDHVVLSWIP----------ACGTCRYCSRGQPNLCDLGAG 108

Query: 134 ---MKFFATPPVH-------------GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV 177
               +                     G+ A   V P     K+ D++ L+  A+   L  
Sbjct: 109 ILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAAL---LGC 165

Query: 178 GV-----HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE 232
           GV          A + P   V ++G G +GL  +  AR  GA RI+ VD    +L +A+ 
Sbjct: 166 GVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARR 225

Query: 233 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV 292
            GA + V  S    D  E V  +    G G D +F+  G   T+  AL  T  GG   +V
Sbjct: 226 FGATHTVNASE--DDAVEAVRDLTD--GRGADYAFEAVGRAATIRQALAMTRKGGTAVVV 281

Query: 293 GMGHHEMTVPLTPA--AVREVDVVGVF----RYKNTWPLCLELLRSGKIDVKPLVTHRFG 346
           GMG    TV L      + E  + G        +   P  L+L R+G++ +  LVT R+ 
Sbjct: 282 GMGPPGETVSLPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYS 341

Query: 347 FSQKEVEEAFETSARGGTA 365
             +  + EAF     G  A
Sbjct: 342 LDE--INEAFADMLAGENA 358

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  180 bits (460), Expect = 9e-54
 Identities = 118/374 (31%), Positives = 167/374 (44%), Gaps = 40/374 (10%)

Query: 18  NMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMV 76
             AA L G    L+I+   LP L P  VLVR++  G+CGSDVH   T+      V  P++
Sbjct: 1   ARAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVH---TVAGRRPRVPLPII 57

Query: 77  IGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF 136
           +GHE  G +  +G  V T V G    L  GDRV    G  C RC  C  G    C   K 
Sbjct: 58  LGHEGVGRVVALGGGVTTDVAG--EPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKK 115

Query: 137 F------ATPPVHGSLANQVVHPADLCF-KLPDNVSLE--EGAMCEPLSVGVHACRRAN- 186
           +        P + G  A  +  P      ++PDNV  E    A C  L+  + A  RA  
Sbjct: 116 YGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANC-ALATVLAALDRAGP 174

Query: 187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ 246
           +G    V++ GAGP+GL  + AA+  GA R++++D    RL +A+E GAD  + +     
Sbjct: 175 VGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDE--- 231

Query: 247 DIAEEVEKIQKAM----GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP 302
               + ++         G G DV  + +G    +   L     GG   LVG      TVP
Sbjct: 232 --LPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVP 289

Query: 303 LTPAAV--REVDVVGVFRYKNTWPLCL----ELLR--SGKIDVKPLVTHRFGFSQKEVEE 354
           L P  +  + + ++GV  Y    P  L      L     +     LVTHR  +  +++ E
Sbjct: 290 LDPERIVRKNLTIIGVHNYD---PSHLYRAVRFLERTQDRFPFAELVTHR--YPLEDINE 344

Query: 355 AFETSARGGTAIKV 368
           A E  A  GTA+KV
Sbjct: 345 ALE-LAESGTALKV 357

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  178 bits (455), Expect = 7e-53
 Identities = 103/371 (27%), Positives = 158/371 (42%), Gaps = 65/371 (17%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+I+  +L      +VLVR+ A G+C +D H L       F    P V+GHE AG++E V
Sbjct: 15  LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEGF----PAVLGHEGAGIVEAV 70

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------- 139
           G  V ++ PGD V L+        P   C +C  C  G+ NLC      AT         
Sbjct: 71  GEGVTSVKPGDHVILL------FTP--ECGQCKFCLSGKPNLC--EAIRATQGKGTMPDG 120

Query: 140 ---------PPVH----GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV-----HA 181
                    P  H     + A   V       K+  +  LE+      L  GV       
Sbjct: 121 TTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKAC---LLGCGVTTGIGAV 177

Query: 182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 241
              A + P   V + G G +GL  +  A+A GA RI+ VD++  +L +AK+ GA + V  
Sbjct: 178 VNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFV-- 235

Query: 242 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTV 301
             N +++ + VE I +    G D +F+C G  + M  AL AT  GG   ++G+      +
Sbjct: 236 --NPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEI 293

Query: 302 PLTPAAVREVDVVGVFRYKNTW----------PLCLELLRSGKIDVKPLVTHRFGFSQKE 351
              P       +V    +K +           P  ++L  +GK+ +  LVTH      ++
Sbjct: 294 STRP-----FQLVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPL--ED 346

Query: 352 VEEAFETSARG 362
           + EAF+    G
Sbjct: 347 INEAFDLMHEG 357

Length = 366

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score =  174 bits (444), Expect = 2e-51
 Identities = 113/355 (31%), Positives = 159/355 (44%), Gaps = 39/355 (10%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           A  +LG+  +      +P  GP D +VR  AV  C SDVH   T+       +  M++GH
Sbjct: 3   AFAMLGIGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVH---TVWGGAPGERHGMILGH 59

Query: 80  ECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----K 135
           E  GV+E+VGSEVK   PGDRV +VP    A+ P    WR    + G  +    M    K
Sbjct: 60  EAVGVVEEVGSEVKDFKPGDRV-IVP----AITP---DWRSVAAQRGYPSQSGGMLGGWK 111

Query: 136 FFATPPVHGSLANQV-VHPADLCF-KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETN 192
           F  +    G  A    V+ AD     LPD ++ E+  M  + +S G H    ANI     
Sbjct: 112 F--SNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHGAELANIKLGDT 169

Query: 193 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV 252
           V + G GP+GL+ +  AR  GA RI+ V     R+ +AKE GA +IV       D+ E++
Sbjct: 170 VAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN--GDVVEQI 227

Query: 253 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD 312
            K+    G G+D      G   T   AL     GG +  V     +  +P+     RE  
Sbjct: 228 LKLTG--GKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPI----PREEW 281

Query: 313 VVGVFRYKNTWPLC----------LELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 357
            VG+        LC            L+  G++D   L+TH F F   ++EEA  
Sbjct: 282 GVGMGHKTINGGLCPGGRLRMERLASLIEYGRVDPSKLLTHHF-FGFDDIEEALM 335

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  170 bits (433), Expect = 7e-50
 Identities = 98/344 (28%), Positives = 160/344 (46%), Gaps = 36/344 (10%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+++   +P  GP  VLVR+   G+C SD+H +  +       K P  +GHE AG +E+V
Sbjct: 13  LRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEV 72

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV--HGSL 146
           GS V          L  GD V + P   C  C +C+ G  N C   +F   P +   G  
Sbjct: 73  GSGVD--------GLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARF---PGIGTDGGF 121

Query: 147 ANQVVHPADLCFKLPDNVSLEEGAMCEPLS-VGV---HACRRAN--IGPETNVLIMGAGP 200
           A  ++ P+    KLP  +   E A   PL+  G+   HA ++A   + P + V+++G G 
Sbjct: 122 AEYLLVPSRRLVKLPRGLDPVEAA---PLADAGLTAYHAVKKALPYLDPGSTVVVIGVGG 178

Query: 201 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 260
           +G + +   RA     ++ VD  +  L +A+ +GAD+++  S    D+ EEV ++    G
Sbjct: 179 LGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASD---DVVEEVRELTG--G 233

Query: 261 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF--R 318
            G D   D  G ++T++ A      GG+  +VG G H   +P +     E+ V+G     
Sbjct: 234 RGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWGT 292

Query: 319 YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 362
                 + + L  SGK+  K  +T    F  ++  EA +    G
Sbjct: 293 RAELVEV-VALAESGKV--KVEITK---FPLEDANEALDRLREG 330

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score =  168 bits (428), Expect = 3e-49
 Identities = 102/351 (29%), Positives = 179/351 (50%), Gaps = 27/351 (7%)

Query: 30  KIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV---------VKEPMVIGHE 80
           +++   +P  GP ++LV+++A GIC  D   +K    A            VK PM+ GHE
Sbjct: 13  RLEEVPVPRPGPGEILVKVEACGICAGD---IKCYHGAPSFWGDENQPPYVKPPMIPGHE 69

Query: 81  CAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA-T 139
             G + ++G   +         +  GDRV  E  + CW C  C  G+Y +C +   +   
Sbjct: 70  FVGRVVELGEGAE------ERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQ 123

Query: 140 PPVHGSLANQVVHPAD-LCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGA 198
             V+G +A  +  P + +  K+PD++  E+  + EPL+  +HA  RANI  +  V++ GA
Sbjct: 124 NNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILIEPLACALHAVDRANIKFDDVVVLAGA 183

Query: 199 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 258
           GP+GL  + AAR     +++++D+ D RL++A++ GAD ++       D+ E+++++   
Sbjct: 184 GPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPE--VDVVEKIKELTG- 240

Query: 259 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVR-EVDVVGVF 317
            G G D+  +  G    +   L      G+     +    +TV  +    R E+DV+G  
Sbjct: 241 -GYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSH 299

Query: 318 RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 368
                +P+ ++L+ SG++    +VTH+  F  ++ EEAFE  ARG  +IKV
Sbjct: 300 LGPYCYPIAIDLIASGRLPTDGIVTHQ--FPLEDFEEAFELMARGDDSIKV 348

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score =  168 bits (428), Expect = 4e-49
 Identities = 111/353 (31%), Positives = 172/353 (48%), Gaps = 28/353 (7%)

Query: 25  GVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFV-VKEPMVIGHECA 82
           G   +  +    P++  P D +V+M    ICG+D+H LK     D   V    ++GHE  
Sbjct: 8   GPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILK----GDVPTVTPGRILGHEGV 63

Query: 83  GVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGIS-CWRCDHCKGGRYNLCPEMKFFATPP 141
           GV+E+VGS V     GDRV +           IS C  C +C+ G Y+ C    +     
Sbjct: 64  GVVEEVGSAVTNFKVGDRVLISC---------ISSCGTCGYCRKGLYSHCESGGWILGNL 114

Query: 142 VHGSLANQVVHP-ADLC-FKLPDNVSLEEGAMCEPLSVGVHAC--RRANIGPETNVLIMG 197
           + G+ A  V  P AD   +KLP+ V  E   M   +    + C      + P   V I+G
Sbjct: 115 IDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVG 174

Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 257
           AGP+GL  +L A+ +   +I++VD+DD RL VAK++GA + V  +    D  E+V ++  
Sbjct: 175 AGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK--GDAIEQVLELTD 232

Query: 258 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF 317
             G G+DV  +  G+  T          GG +  VG+    + + L    ++ + +    
Sbjct: 233 --GRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGL 290

Query: 318 RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT--AIKV 368
              NT P+ L+L+ SGK+D   LVTHRF  S  E+E+A++T +      A+KV
Sbjct: 291 VDTNTTPMLLKLVSSGKLDPSKLVTHRFKLS--EIEKAYDTFSAAAKHKALKV 341

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score =  167 bits (426), Expect = 6e-49
 Identities = 106/340 (31%), Positives = 162/340 (47%), Gaps = 30/340 (8%)

Query: 40  GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99
            P D +V++ A  ICGSD+H  +             V+GHE  G + +VG EV+TL  GD
Sbjct: 24  DPTDAIVKVTAAAICGSDLHIYR----GHIPSTPGFVLGHEFVGEVVEVGPEVRTLKVGD 79

Query: 100 RVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---ATPPVHGSLANQVVHP-AD 155
           RV + P         I+C  C +C+ G+   C +   F    +P + G+ A  V  P AD
Sbjct: 80  RV-VSPFT-------IACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFAD 131

Query: 156 L-CFKLPDNVSLEEG-AMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFG 213
               KLPD +S E    + + L  G    +RA + P   V ++G GP+GL  +L+A+  G
Sbjct: 132 GTLLKLPDGLSDEAALLLGDILPTGYFGAKRAQVRPGDTVAVIGCGPVGLCAVLSAQVLG 191

Query: 214 APRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM-GTGIDVSFDCAGL 272
           A R+  VD    RL  A  +GA+ I     N +D AE VE++++A  G G DV  +  G 
Sbjct: 192 AARVFAVDPVPERLERAAALGAEPI-----NFED-AEPVERVREATEGRGADVVLEAVGG 245

Query: 273 NKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDV-VGVFRYKNTWPLCLELL 330
              +  A      GG +  VG+    E   P   A  + + +  G    ++ +P  L LL
Sbjct: 246 AAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLL 305

Query: 331 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 370
            SG++D++ L+ HR      E  EA+    +    +KV+ 
Sbjct: 306 ESGRLDLEFLIDHRMPLE--EAPEAYRLFDK-RKVLKVVL 342

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score =  165 bits (419), Expect = 7e-48
 Identities = 102/362 (28%), Positives = 153/362 (42%), Gaps = 34/362 (9%)

Query: 19  MAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM--- 75
           M A +     L ++    P  GP  VLV++ A GICGSD+H              P    
Sbjct: 1   MRAAVFRDGPLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMD 60

Query: 76  -----VIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNL 130
                V+GHE  G +   G       PG    L  G RV   P + C +   C  G    
Sbjct: 61  LGADIVLGHEFCGEVVDYG-------PGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPE 113

Query: 131 CPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPE 190
            P           G  A  ++    L  ++PD +S+E+ A+ EPL+VG+HA RRA + P 
Sbjct: 114 AP-----------GGYAEYMLLSEALLLRVPDGLSMEDAALTEPLAVGLHAVRRARLTPG 162

Query: 191 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE 250
              L++G GPIGL  + A +A G   IV  D    R ++A  +GAD +V  + +    A 
Sbjct: 163 EVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAW 222

Query: 251 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA--V 308
             E  +        V F+C G    +   +     GG++ +VG+     +  + PA    
Sbjct: 223 AAELARAGGPKP-AVIFECVGAPGLIQQIIEGAPPGGRIVVVGV--CMESDNIEPALAIR 279

Query: 309 REVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIK 367
           +E+ +     Y    +   L+ L  GK+DV P+VT   G     V +AFE         K
Sbjct: 280 KELTLQFSLGYTPEEFADALDALAEGKVDVAPMVTGTVGLD--GVPDAFEALRDPEHHCK 337

Query: 368 VM 369
           ++
Sbjct: 338 IL 339

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  164 bits (418), Expect = 2e-47
 Identities = 108/377 (28%), Positives = 156/377 (41%), Gaps = 68/377 (18%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             ++  EL    P +VLVR+ A GIC +D+     +R        P V+GHE AGV+E V
Sbjct: 15  FVLEDVELDDPRPDEVLVRIVATGICHTDLV----VRDGGLPTPLPAVLGHEGAGVVEAV 70

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM---KFFAT------ 139
           GS V  L PGD V L            SC  C +C  G    C       F         
Sbjct: 71  GSAVTGLKPGDHVVLSFA---------SCGECANCLSGHPAYCENFFPLNFSGRRPDGST 121

Query: 140 -------PPVHG------SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHA----- 181
                   PVHG      S A   V       K+  +V LE  A   PL  G+       
Sbjct: 122 PLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLA---PLGCGIQTGAGAV 178

Query: 182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 241
                  P +++ + GAG +GL  ++AA+  G   I+ VD+ D RL +AKE+GA +++  
Sbjct: 179 LNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP 238

Query: 242 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG--HHEM 299
               +D+   V  I++  G G+D + D  G+   +  A+ A    G + LVG      E+
Sbjct: 239 KE--EDL---VAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEV 293

Query: 300 TVPLTPAAVREVDVVGV---------FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQK 350
           T+ +    V    + GV         F      P  +EL R GK     LVT    +  +
Sbjct: 294 TLDVNDLLVSGKTIRGVIEGDSVPQEF-----IPRLIELYRQGKFPFDKLVTF---YPFE 345

Query: 351 EVEEAFETSARGGTAIK 367
           ++ +A   S  G   IK
Sbjct: 346 DINQAIADSESGKV-IK 361

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score =  154 bits (391), Expect = 2e-43
 Identities = 114/383 (29%), Positives = 169/383 (44%), Gaps = 80/383 (20%)

Query: 41  PYDVLVRMKAVGICGSDVH----YLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
           P D +VR+ A  ICGSD+H    Y+  +       K+  ++GHE  GV+E+VG EV+ L 
Sbjct: 25  PTDAIVRVTATAICGSDLHLYHGYIPGM-------KKGDILGHEFMGVVEEVGPEVRNLK 77

Query: 97  PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLC------PEMK---------FF---- 137
            GDRV +VP         I+C  C +CK G Y+ C       EM           F    
Sbjct: 78  VGDRV-VVP-------FTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSH 129

Query: 138 ATPPVHGSLANQVVHP-ADL-CFKLPDNVSLEEGA-MCEPLSVGVHACRRANIGPETNVL 194
            T    G  A  V  P AD+  FK+PD++S E+   + + L  G HA   A + P   V 
Sbjct: 130 LTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAAELAEVKPGDTVA 189

Query: 195 IMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVE 253
           + G GP+GL    +A+  GA R++ +D    RL +A+  +GA+ I      + D+ E + 
Sbjct: 190 VWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINF--EEVDDVVEALR 247

Query: 254 KIQKAMGTGIDVSFDCAG-------LNKTMSTALG--------------ATCAGGKVCLV 292
           ++    G G DV  D  G       L+K     L               A   GG V ++
Sbjct: 248 ELTG--GRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSII 305

Query: 293 G--MGHHEMTVPLTPAAVREVDVVG----VFRYKNTWPLCLELLRSGKIDVKPLVTHRFG 346
           G   G      P+  A  + + +      V RY    P  LEL+ SG++D   ++THR  
Sbjct: 306 GVYGGTVN-KFPIGAAMNKGLTLRMGQTHVQRY---LPRLLELIESGELDPSFIITHRLP 361

Query: 347 FSQKEVEEAFET-SARGGTAIKV 368
               +  EA++    +    IKV
Sbjct: 362 LE--DAPEAYKIFDKKEDGCIKV 382

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  153 bits (388), Expect = 4e-43
 Identities = 108/369 (29%), Positives = 172/369 (46%), Gaps = 48/369 (13%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+   +P     ++L+R+ A G+C SD+H LK     +     P V+GHE +G + +V
Sbjct: 13  LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLK----GELPFPPPFVLGHEISGEVVEV 68

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA---------- 138
           G  V+     +   L  GDRV     + C +C +C  G+ NLC    FFA          
Sbjct: 69  GPNVE-----NPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCE--DFFAYNRLKGTLYD 121

Query: 139 ---------TPPVH----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACR 183
                      PV+    G LA   V PA     LP+++   E A+  C   +    A +
Sbjct: 122 GTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFT-AYGALK 180

Query: 184 RAN-IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 242
            A  + P   V ++G G +G   +  A+AFGA  I+ VDV D +L+ AKE+GA +   V+
Sbjct: 181 HAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHT--VN 238

Query: 243 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT-- 300
              +D    + +I    G G+DV  +  G  +T   AL     GG+  +VG+     T  
Sbjct: 239 AAKEDAVAAIREI--TGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAE 296

Query: 301 VPLTPAAVREVDVVGVFRYK--NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET 358
           +P+T    R + ++G +  +     P  + L  SGK+D + LVTH++    +E+ EA+E 
Sbjct: 297 IPITRLVRRGIKIIGSYGARPRQDLPELVGLAASGKLDPEALVTHKYKL--EEINEAYEN 354

Query: 359 SARGGTAIK 367
             +G    +
Sbjct: 355 LRKGLIHGR 363

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score =  151 bits (384), Expect = 7e-43
 Identities = 101/326 (30%), Positives = 161/326 (49%), Gaps = 52/326 (15%)

Query: 41  PYDVLVRMKAVGICGSDV--------HYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV 92
             DVLV++ + G+CGSD+        HY             P+ +GHE +G +E VGS V
Sbjct: 25  QDDVLVKVASSGLCGSDIPRIFKNGAHYY------------PITLGHEFSGYVEAVGSGV 72

Query: 93  KTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 152
             L PGD V  VP     L P   C+ C  C  G Y+LC +  F  +    G+    VV 
Sbjct: 73  DDLHPGDAVACVP-----LLP---CFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVK 124

Query: 153 PADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAF 212
             +L F LP ++ +E+GA  EP++VG+HA   A      NV+I+GAG IGL+ +  A A 
Sbjct: 125 RKNL-FALPTDMPIEDGAFIEPITVGLHAFHLAQGCEGKNVIIIGAGTIGLLAIQCAVAL 183

Query: 213 GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD---- 268
           GA  +  +D++  +L++AK +GA        N ++++    +IQ  +    ++ FD    
Sbjct: 184 GAKSVTAIDINSEKLALAKSLGAMQTF----NSREMS--APQIQSVLR---ELRFDQLIL 234

Query: 269 -CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV---REVDVVGVF-RYKNTW 323
             AG+ +T+  A+       ++ LVG  HH++ +          +E+ V+G +  Y + W
Sbjct: 235 ETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPW 294

Query: 324 P-----LCLELLRSGKIDVKPLVTHR 344
           P         LL   K+ ++PL+ HR
Sbjct: 295 PGQEWETASRLLTERKLSLEPLIAHR 320

Length = 347

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  151 bits (383), Expect = 1e-42
 Identities = 102/336 (30%), Positives = 160/336 (47%), Gaps = 37/336 (11%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+I+    P  GP +VL+++KA G+C  D+ + K         K P+++GHE  G +E+V
Sbjct: 13  LQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR---GKYPLILGHEIVGTVEEV 69

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 148
           G  V+   PGDRV L           I C +C++C  G  NLC     +    V G  A 
Sbjct: 70  GEGVERFKPGDRVILY--------YYIPCGKCEYCLSGEENLCRNRAEYGE-EVDGGFAE 120

Query: 149 QVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGP---IGL 203
            V  P     KLPDNVS E  A   C  +   VHA +RA +     VL+ GAG    I  
Sbjct: 121 YVKVPERSLVKLPDNVSDESAALAAC-VVGTAVHALKRAGVKKGDTVLVTGAGGGVGIHA 179

Query: 204 VTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 263
           + +  A+A GA R++ V     +L + KE+GAD ++  S      +E+V+K+      G 
Sbjct: 180 IQL--AKALGA-RVIAVTRSPEKLKILKELGADYVIDGS----KFSEDVKKL-----GGA 227

Query: 264 DVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVFRY-KN 321
           DV  +  G + T+  +L +   GG++ L+G +      +      ++E+ ++G     K 
Sbjct: 228 DVVIELVG-SPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKA 286

Query: 322 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 357
                L+L++ GKI  KP++          + EA E
Sbjct: 287 DVEEALKLVKEGKI--KPVIDRVVSLED--INEALE 318

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score =  151 bits (383), Expect = 2e-42
 Identities = 94/368 (25%), Positives = 155/368 (42%), Gaps = 51/368 (13%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  E+      +V +++ A G+C +D+H +            P+++GHE AG++E +
Sbjct: 13  LSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVID----GKLPTPLPVILGHEGAGIVESI 68

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 140
           G  V TL PGD+V  + G          C +C  C   R NLC   K   T         
Sbjct: 69  GPGVTTLKPGDKVIPLFGP--------QCGKCKQCLNPRPNLC--SKSRGTNGRGLMSDG 118

Query: 141 ---------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHAC-R 183
                    P+H      + A   V       K+  +  LE+  +  C   S G  A   
Sbjct: 119 TSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCG-FSTGYGAAVN 177

Query: 184 RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST 243
            A + P +   + G G +GL  ++  +A GA RI+ VD++  +   AK++GA   +    
Sbjct: 178 TAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRD 237

Query: 244 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGAT-CAGGKVCLVGMGHHEMTVP 302
             + I   VE + +    G+D +F+  G   T+  AL AT   GG   +VG+        
Sbjct: 238 QDKPI---VEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEAT 294

Query: 303 LTPAAVRE-----VDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 357
           L P  +         V G ++ K++ P  + L R  K  +  L+TH   F  +E+ + F+
Sbjct: 295 LDPNDLLTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPF--EEINDGFD 352

Query: 358 TSARGGTA 365
               G + 
Sbjct: 353 LMRSGESI 360

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score =  151 bits (383), Expect = 2e-42
 Identities = 100/348 (28%), Positives = 166/348 (47%), Gaps = 30/348 (8%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF----VVKEPMVIGHECAGV 84
           L+++   +P+L P ++L+R+KA GICGSD+H  +T +        + + P+VIGHE +GV
Sbjct: 39  LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGV 98

Query: 85  IEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
           +EK G  VK    GD VT         E  + C  C  C+ G  N C  +K        G
Sbjct: 99  VEKTGKNVKNFEKGDPVTA--------EEMMWCGMCRACRSGSPNHCKNLKELGFS-ADG 149

Query: 145 SLANQVVHPADLCFKLPDNV-------SLEEGAMCEPLSVGVHAC--RRANIGPETNVLI 195
           + A  +   A   +++ +         + E GA+ EP SV  +    R     P   V++
Sbjct: 150 AFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVV 209

Query: 196 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 255
            GAGPIGL  +  A+A GA +++  ++ + R ++AKE+GAD +   +          EK+
Sbjct: 210 YGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYV--FNPTKMRDCLSGEKV 267

Query: 256 QKAM-GTGIDVSFDCAGLNKTMSTALGATCA-GGKVCLVGMGHHEMTVPLTPAAVREVDV 313
            +   G G D+  + AG        +  + A  GK+  +G     + + L    VR   +
Sbjct: 268 MEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQI 327

Query: 314 VGVFRYKN--TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS 359
           VG   +     +P  ++L+ SGKID+  ++T RF      + EA + +
Sbjct: 328 VGAQGHSGHGIFPSVIKLMASGKIDMTKIITARFPLE--GIMEAIKAA 373

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  150 bits (381), Expect = 3e-42
 Identities = 104/345 (30%), Positives = 159/345 (46%), Gaps = 57/345 (16%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+I+    P   P  V+V ++A G+C SD H     +  D  V  P V GHE AGV+ +V
Sbjct: 13  LEIREVPDPEPPPDGVVVEVEACGVCRSDWH---GWQGHDPDVTLPHVPGHEFAGVVVEV 69

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGIS-CWRCDHCKGGRYNLCPEMKFFATPP---VHG 144
           G +V     GDRVT+         P +  C  C +C+ G  N+C         P     G
Sbjct: 70  GEDVSRWRVGDRVTV---------PFVLGCGTCPYCRAGDSNVCEHQ----VQPGFTHPG 116

Query: 145 SLANQV-VHPADL-CFKLPDNVSLEEGAMCEPLSVGVHACR----------RANIGPETN 192
           S A  V V  AD+   +LPD+V     A      +G   CR          +A + P   
Sbjct: 117 SFAEYVAVPRADVNLVRLPDDVDFVTAA-----GLG---CRFATAFRALVHQARVKPGEW 168

Query: 193 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV 252
           V + G G +GL  ++ A A GA R++ VD+DD +L +A+E+GA   V  ++ ++D+A  V
Sbjct: 169 VAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVN-ASEVEDVAAAV 226

Query: 253 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM---GHHEMTVPLTPAAVR 309
             +    G G  VS D  G+ +T   ++ +    G+   VG+       + +P+     R
Sbjct: 227 RDL---TGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVAR 283

Query: 310 EVDVVGVF-----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQ 349
           E+++VG       RY       L L+ SGK+D +PLV       +
Sbjct: 284 ELEIVGSHGMPAHRY----DAMLALIASGKLDPEPLVGRTISLDE 324

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score =  146 bits (371), Expect = 5e-41
 Identities = 96/336 (28%), Positives = 154/336 (45%), Gaps = 29/336 (8%)

Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
           N+L I+   +P     +V V++K  GICGSD H     R  +   K P VIGHE  GVI+
Sbjct: 10  NSLAIEERPIPQPAAGEVRVKVKLAGICGSDSH---IYRGHNPFAKYPRVIGHEFFGVID 66

Query: 87  KVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--G 144
            VG  V       R+    G+RVA++P ISC  C  C  G+ N+C  +       VH  G
Sbjct: 67  AVGEGVDA----ARI----GERVAVDPVISCGHCYPCSIGKPNVCTSLVVLG---VHRDG 115

Query: 145 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLV 204
             +   V PA    ++PD ++ +   M EP ++  +   R     +   LI GAGP+GL 
Sbjct: 116 GFSEYAVVPAKNAHRIPDAIADQYAVMVEPFTIAANVTGRTGPTEQDVALIYGAGPVGLT 175

Query: 205 TMLA-ARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 263
            +      +    +++ D  D RL++AKE GAD ++  +   + + E +E+       GI
Sbjct: 176 IVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ--EPLGEALEE------KGI 227

Query: 264 DVS--FDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 321
             +   D A     +  A+       ++ L+G       +       +E+ +       N
Sbjct: 228 KPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRLNAN 287

Query: 322 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 357
            +P+ ++ L  G ID + L+TH F F  + V +A E
Sbjct: 288 KFPVVIDWLSKGLIDPEKLITHTFDF--QHVADAIE 321

Length = 339

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score =  145 bits (367), Expect = 1e-40
 Identities = 89/342 (26%), Positives = 140/342 (40%), Gaps = 51/342 (14%)

Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
             P+ GP  VLVR++  G+CGSD+      R       EP   GHE  G +  +G  V+ 
Sbjct: 13  PRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRG 72

Query: 95  LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA 154
           L  GDRV  + G                                     G+ A   +  A
Sbjct: 73  LAVGDRVAGLSG-------------------------------------GAFAEYDLADA 95

Query: 155 DLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA 214
           D    LP      +    EPL   ++  RR  I     V ++GAG IGL+ +  A A GA
Sbjct: 96  DHAVPLPSL-LDGQAFPGEPLGCALNVFRRGWIRAGKTVAVIGAGFIGLLFLQLAAAAGA 154

Query: 215 PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK 274
            R++ +D    RL++A+E+GA  +V   +  + I E V ++    G G DV  +  G   
Sbjct: 155 RRVIAIDRRPARLALARELGATEVVTDDS--EAIVERVRELTG--GAGADVVIEAVGHQW 210

Query: 275 TMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVG-VFR----YKNTWPLCLE 328
            +  A       G++ + G        VP      + +D++  V R            ++
Sbjct: 211 PLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVK 270

Query: 329 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVM 369
           L+  G++D+  L+TH F    +E+ +AFE + R     IK +
Sbjct: 271 LIADGRLDLGSLLTHEFPL--EELGDAFEAARRRPDGFIKGV 310

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  146 bits (370), Expect = 1e-40
 Identities = 109/367 (29%), Positives = 160/367 (43%), Gaps = 57/367 (15%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  EL   GP +VLV++ A G+C SD+  +   R        PM +GHE AGV+ +V
Sbjct: 21  LVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDR----PRPLPMALGHEAAGVVVEV 76

Query: 89  GSEVKTLVPGDRVTL--VPGDRVALEPGISCWRCDHCKGGRYNLCP-------------- 132
           G  V  L  GD V L  VP          SC  C  C  GR  LC               
Sbjct: 77  GEGVTDLEVGDHVVLVFVP----------SCGHCRPCAEGRPALCEPGAAANGAGTLLSG 126

Query: 133 --EMKFFATPPVH----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHAC-R 183
              ++       H     + A   V       K+  +V LE  A+  C  L+ GV A   
Sbjct: 127 GRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLT-GVGAVVN 185

Query: 184 RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST 243
            A + P  +V ++G G +GL  +L A A GA ++V VD+++ +L++A+E+GA   V    
Sbjct: 186 TAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGD 245

Query: 244 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH--HEMTV 301
                   VE++++  G G+D +F+ AG    + TA   T  GG     G+      ++V
Sbjct: 246 -----PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSV 300

Query: 302 PLTPAAVREVDVVGVFRYKNTW------PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 355
           P       E  + G   Y  +       P  L L  SG++ V  L+THR      E+ E 
Sbjct: 301 PALSLVAEERTLKG--SYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLD--EINEG 356

Query: 356 FETSARG 362
           F+  A G
Sbjct: 357 FDRLAAG 363

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  141 bits (359), Expect = 2e-39
 Identities = 103/355 (29%), Positives = 147/355 (41%), Gaps = 44/355 (12%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           A  L G   L+++    P   P + LVR+   GIC +D+   K           P V GH
Sbjct: 3   ALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYY------PFPGVPGH 56

Query: 80  ECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 139
           E  G++E+               LV G RV  E  I+C RC++C+ G Y  CP       
Sbjct: 57  EFVGIVEEGPEA----------ELV-GKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGI 105

Query: 140 PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAG 199
               G+ A  +  P +    +PD V  E+    EPL+  +    +  I P   V ++G G
Sbjct: 106 VDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLAAALEILEQVPITPGDKVAVLGDG 165

Query: 200 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 259
            +GL+        G P +V+V     +L++A+ +G      V T L D AE         
Sbjct: 166 KLGLLIAQVLALTG-PDVVLVGRHSEKLALARRLG------VETVLPDEAESE------- 211

Query: 260 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV----G 315
           G G DV  +  G    +  AL      G V L        +  LT A V E+ +V    G
Sbjct: 212 GGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCG 271

Query: 316 VFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 370
            F         L LLR G +DV PL+T  +     E  EAFE +A  G  +KV+ 
Sbjct: 272 PF------APALRLLRKGLVDVDPLITAVYPLE--EALEAFERAAEPGA-LKVLL 317

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  141 bits (358), Expect = 4e-39
 Identities = 92/345 (26%), Positives = 146/345 (42%), Gaps = 43/345 (12%)

Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
            L+ +   +P  GP +VL++++A G+C +D+H            K P+V GHE  G + +
Sbjct: 11  PLEPEEVPVPEPGPGEVLIKIEACGVCHTDLH---AAEGDWGGSKYPLVPGHEIVGEVVE 67

Query: 88  VGSEVKTLVPGDRVTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFATPPV 142
           VG+ V+    GDRV            G+     SC RC++C+ G  NLC +     T   
Sbjct: 68  VGAGVEGRKVGDRV------------GVGWLVGSCGRCEYCRRGLENLCQKAVN--TGYT 113

Query: 143 H-GSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAG 199
             G  A  +V  A+    LPD + L + A  +C  ++V   A R A   P   V ++G G
Sbjct: 114 TQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITV-YSALRDAGPRPGERVAVLGIG 172

Query: 200 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 259
            +G + +  ARA G    V +     +  +A+++GAD +V         +      Q A 
Sbjct: 173 GLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVD--------SGAELDEQAAA 223

Query: 260 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAAVREVDVVGVFR 318
           G G DV             ALG    GG++ LVG+      +  + P  ++   + G   
Sbjct: 224 G-GADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGS-- 280

Query: 319 YKNTWPLCLELLR-SGKIDVKPLVTHRFGFSQKEVEEAFETSARG 362
                    E L  + +  VKP +   F   Q    EA+E   +G
Sbjct: 281 THGGRADLQEALDFAAEGKVKP-MIETFPLDQ--ANEAYERMEKG 322

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  141 bits (358), Expect = 6e-39
 Identities = 98/343 (28%), Positives = 154/343 (44%), Gaps = 34/343 (9%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL---------KTLRCADFVVKEPMVIGH 79
           L+    + P     +VLV++ A G+C SD+H           KT+   D  VK P+V+GH
Sbjct: 13  LEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGH 72

Query: 80  ECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 139
           E  G +  VG +        +V    GD+V + P I C  C  C  G  NLC + +    
Sbjct: 73  EIVGEVVAVGPDAA----DVKV----GDKVLVYPWIGCGECPVCLAGDENLCAKGRALGI 124

Query: 140 PPVHGSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACRRAN-IGPETNVLIM 196
               G  A  V+ P       P  +     A   C  L+    A ++   +  +  V+I+
Sbjct: 125 FQ-DGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTA-YSAVKKLMPLVADEPVVII 182

Query: 197 GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ 256
           GAG +GL+ +   +A G   I++VD+D+ +L  AK  GAD +V    N  D  +  ++I 
Sbjct: 183 GAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVV----NGSD-PDAAKRII 237

Query: 257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 316
           KA G G+D   D    + T S A      GGK+ LVG+   E T+PL    +R + + G 
Sbjct: 238 KAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGS 297

Query: 317 F--RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 357
           +    +    L + L ++GK+   PL          +V +A +
Sbjct: 298 YVGSLEELREL-VALAKAGKLKPIPLTER----PLSDVNDALD 335

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  137 bits (347), Expect = 2e-37
 Identities = 105/360 (29%), Positives = 159/360 (44%), Gaps = 48/360 (13%)

Query: 20  AAWLL--GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKEPM 75
           AA +   G    +++   +P  GP +VLV+++A G+C +D+H        D+    K P+
Sbjct: 3   AAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAAL----GDWPVKPKLPL 58

Query: 76  VIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGI-----SCWRCDHCKGGRYNL 130
           + GHE AGV+  VG  V  L  GDRV            G+     +C +C++C+ G   L
Sbjct: 59  IGGHEGAGVVVAVGPGVSGLKVGDRV------------GVKWLYDACGKCEYCRTGDETL 106

Query: 131 CPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIG 188
           CP  K  +   V G+ A   +  A     +PD +S E+ A  +C  ++V   A ++A + 
Sbjct: 107 CPNQK-NSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTV-YKALKKAGLK 164

Query: 189 PETNVLIMGAGPIGLVTMLA---ARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL 245
           P   V+I GAG  G +  L    A+A G  R++ +DV D +L +AKE+GAD  V      
Sbjct: 165 PGDWVVISGAG--GGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKK-- 219

Query: 246 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP 305
            D  E V+++    G G       A        AL     GG +  VG+      +PL P
Sbjct: 220 SDDVEAVKEL--TGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGF-IPLDP 276

Query: 306 AAV--REVDVVGVFRYKNTW-PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 362
             +  R + +VG            LE    GK  VKP +          + E FE    G
Sbjct: 277 FDLVLRGITIVGSLVGTRQDLQEALEFAARGK--VKPHIQ-VVPLED--LNEVFEKMEEG 331

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  133 bits (336), Expect = 6e-36
 Identities = 94/351 (26%), Positives = 141/351 (40%), Gaps = 57/351 (16%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE-PMVIGHECAG 83
           G   LK+     P  GP +VLVR+KA G+   DV      +     V+  P + G E AG
Sbjct: 11  GPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDV---LVRQGLAPPVRPLPFIPGSEAAG 67

Query: 84  VIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 143
           V+  VGS V     GDRV                                          
Sbjct: 68  VVVAVGSGVTGFKVGDRVA---------------------------------ALGGVGRD 94

Query: 144 GSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGA-GP 200
           G  A  VV PAD    LPD +S EE A      L+  +    RA + P   VL+ GA G 
Sbjct: 95  GGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGG 154

Query: 201 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 260
           +G   +  A+A GA  + +V   + +L + KE+GAD+++      +D  E+V ++    G
Sbjct: 155 VGSAAIQLAKALGATVVAVVSSSE-KLELLKELGADHVINYRE--EDFVEQVRELTG--G 209

Query: 261 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM--GHHEMTVPLTPAAVREVDVVGVFR 318
            G+DV  D  G   T + +L A   GG++  +G   G   + + L P   + + + GV  
Sbjct: 210 KGVDVVLDTVG-GDTFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTL 268

Query: 319 YKNTWPL-------CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 362
                           +LL SGK+  KP++   +  ++     A     R 
Sbjct: 269 GSRDPEALAEALAELFDLLASGKL--KPVIDRVYPLAEAPAAAAHLLLERR 317

Length = 326

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  132 bits (334), Expect = 1e-35
 Identities = 92/351 (26%), Positives = 140/351 (39%), Gaps = 61/351 (17%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+   FE   LGP DV +++   G+C SD+H   TLR      K P+V GHE  G++  V
Sbjct: 12  LEPFTFERRPLGPDDVDIKITYCGVCHSDLH---TLRNEWGPTKYPLVPGHEIVGIVVAV 68

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFATPPV- 142
           GS+V     GDRV            G+     SC  C+ CK G    CP+          
Sbjct: 69  GSKVTKFKVGDRV------------GVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYP 116

Query: 143 -----HGSLANQVVHPADLCFKLPDNVSLEEGA--MC------EPLSVGVHACRRANIGP 189
                 G  A+ +V      FK+P+ +     A  +C       PL       +R  +GP
Sbjct: 117 DGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPL-------KRNGVGP 169

Query: 190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIA 249
              V ++G G +G + +  A+A GA  +        +   A ++GAD  +          
Sbjct: 170 GKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFI--------AT 220

Query: 250 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVR 309
           ++ E ++KA G+ +D+  D    +  +   L     GG + LVG     + VP  P    
Sbjct: 221 KDPEAMKKAAGS-LDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFG 279

Query: 310 EVDVVGVF--RYKNTWPLCLELLR-SGKIDVKPLVTHRFGFSQKEVEEAFE 357
              V G      K T     E+L  + +  +KP V          + EA E
Sbjct: 280 RKSVAGSLIGGRKET----QEMLDFAAEHGIKPWVEV---IPMDGINEALE 323

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score =  132 bits (334), Expect = 2e-35
 Identities = 104/366 (28%), Positives = 168/366 (45%), Gaps = 42/366 (11%)

Query: 20  AAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           A  + G   ++++    P +  P D ++R+ A  +CGSD+   + +         P  IG
Sbjct: 3   ATVIHGPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPTR----APAPIG 58

Query: 79  HECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA 138
           HE  GV+E+VGSEV ++ PGD V + P         IS   C  C+ G    C    F+ 
Sbjct: 59  HEFVGVVEEVGSEVTSVKPGDFV-IAPFA-------ISDGTCPFCRAGFTTSCVHGGFW- 109

Query: 139 TPPVHGSLANQVVHP-AD-LCFKLPDNVSLEEG------AMCEPLSVGVHACRRANIGPE 190
              V G     V  P AD    K+P + S +E       A+ + +  G HA   A + P 
Sbjct: 110 GAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAAVSAGVRPG 169

Query: 191 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE 250
           + V+++G G +GL  +LAA+  GA RI+ +   + R ++A+E GA +IV      +   E
Sbjct: 170 STVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVA-----ERGEE 224

Query: 251 EVEKIQKAM--GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV 308
            V ++ + +  G G D   +C G  ++M  A+     GG+V  VG+ H  + + +     
Sbjct: 225 AVARV-RELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFF 283

Query: 309 REVDVVG----VFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET-SARGG 363
           R V + G    V RY    P  L+ + +G+I+   +          EV E +     R  
Sbjct: 284 RNVGLAGGPAPVRRYL---PELLDDVLAGRINPGRVFDLTLPLD--EVAEGYRAMDER-- 336

Query: 364 TAIKVM 369
            AIKV+
Sbjct: 337 RAIKVL 342

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score =  123 bits (311), Expect = 7e-35
 Identities = 50/118 (42%), Positives = 64/118 (54%), Gaps = 12/118 (10%)

Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVT 102
           +VLVR+KA GICGSD+H  +        VK P+++GHE AG++E+VG  V          
Sbjct: 3   EVLVRVKAAGICGSDLHIYRG---EPPPVKLPLILGHEGAGIVEEVGPGVT--------G 51

Query: 103 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL 160
           L  GDRV + P I C +C  C+ GR NLCP  KF     + G  A  VV PA     L
Sbjct: 52  LKVGDRVVVYPLIPCGKCAACREGRENLCPNGKFLGV-HLDGGFAEYVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  127 bits (321), Expect = 9e-34
 Identities = 102/343 (29%), Positives = 148/343 (43%), Gaps = 44/343 (12%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+      P  GP +VLVR+KA  +   D+   + +      +  P ++G + AGV+E V
Sbjct: 15  LEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIK--LPLPHILGSDGAGVVEAV 72

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 148
           G  V  + PG RV + PG        ISC RC++C  GR NLC +        V G  A 
Sbjct: 73  GPGVTNVKPGQRVVIYPG--------ISCGRCEYCLAGRENLCAQYGILGE-HVDGGYAE 123

Query: 149 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGV--HACR-RANIGPETNVLIMGAGP-IGLV 204
            V  PA     +PDN+S EE A   PL+     H    RA + P   VL+ GAG  +G  
Sbjct: 124 YVAVPARNLLPIPDNLSFEEAA-AAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSA 182

Query: 205 TMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 264
            +  A+ FGA  I     +D +L  AKE+GAD ++      +D   EV ++      G+D
Sbjct: 183 AIQIAKLFGATVIATAGSED-KLERAKELGADYVIDYRK--EDFVREVRELTG--KRGVD 237

Query: 265 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREV-----DVVGVF-- 317
           V  +  G   T   +L +   GG++   G      T    P  +R V      ++G    
Sbjct: 238 VVVEHVGA-ATWEKSLKSLARGGRLVTCG----ATTGYEAPIDLRHVFWRQLSILGSTMG 292

Query: 318 ---RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 357
                       L L+  GK+  KP++   F     E  EA  
Sbjct: 293 TKAELDEA----LRLVFRGKL--KPVIDSVFPLE--EAAEAHR 327

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  127 bits (320), Expect = 2e-33
 Identities = 97/381 (25%), Positives = 165/381 (43%), Gaps = 55/381 (14%)

Query: 19  MAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
             AW  G   L I+  E+      +V ++M A  +C +D+  ++  +   F    P+++G
Sbjct: 6   AVAWEAG-KPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKATLF----PVILG 60

Query: 79  HECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGIS-CWRCDHCKGGRYNLCPEMKFF 137
           HE AG++E VG  V  L PGD+V  +P         I  C  C +C+ G+ NLC + +  
Sbjct: 61  HEGAGIVESVGEGVTNLKPGDKV--IP-------LFIGQCGECSNCRSGKTNLCQKYRAN 111

Query: 138 ATP--------------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG 178
            +                ++      + +   V   +   K+     LE   +   L  G
Sbjct: 112 ESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCL---LGCG 168

Query: 179 VH-----ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI 233
                  A   A + P + V + G G +GL  ++ A+  GA RI+ VD+++ +   AKE 
Sbjct: 169 FSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEF 228

Query: 234 GADNIVKVSTNLQDIAEEV-EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCL 291
           GA + +    N +D  + V E I++  G G+D SF+C G    M+ AL +T  G G   +
Sbjct: 229 GATDFI----NPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVV 284

Query: 292 VGMGH--HEMTVPLTPAAVREVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 347
           VG+         P      R       G F+ ++  P  +    + K D+  L+TH   F
Sbjct: 285 VGVPPGAELSIRPFQLILGRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPF 344

Query: 348 SQKEVEEAFETSARGGTAIKV 368
             +E+ + F+   + G  I+ 
Sbjct: 345 --EEINKGFDL-MKSGECIRT 362

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score =  122 bits (308), Expect = 2e-31
 Identities = 83/270 (30%), Positives = 121/270 (44%), Gaps = 34/270 (12%)

Query: 18  NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMV 76
             A    G   + ++    P +  P D +VR+    ICGSD+H  +         +  +V
Sbjct: 1   MKAVVYGGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYR----GRTGAEPGLV 56

Query: 77  IGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM-- 134
           +GHE  G +E+VGS V++L  GDRV +VP         ++C RC +CK G   +C  +  
Sbjct: 57  LGHEAMGEVEEVGSAVESLKVGDRV-VVPF-------NVACGRCRNCKRGLTGVCLTVNP 108

Query: 135 -------KFFATPPVHGSLANQVVHP-ADL-CFKLPDNVSLEEGAMCEPLS----VGVHA 181
                   +    P  G  A  +  P AD    KLPD    +E      LS     G H 
Sbjct: 109 GRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHG 168

Query: 182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 241
              A + P   V + GAGP+GL+   +A   GA R+ +VD    RL +A+ IGA  I   
Sbjct: 169 LELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAIPI--- 225

Query: 242 STNLQDIAEEVEKIQKAMGTGIDVSFDCAG 271
             +  D  + VE+I      G+D + DC G
Sbjct: 226 --DFSD-GDPVEQILGLEPGGVDRAVDCVG 252

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score =  118 bits (297), Expect = 8e-31
 Identities = 79/327 (24%), Positives = 123/327 (37%), Gaps = 72/327 (22%)

Query: 60  YLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWR 119
            L+ L      +  P+  G+   G + +VGS V    PGDRV                  
Sbjct: 7   ALEGLSTGTEKLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRV------------------ 48

Query: 120 CDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV 179
                            F      G  A +VV PA+L   LPD +  E  A+    +  +
Sbjct: 49  -----------------FC----FGPHAERVVVPANLLVPLPDGLPPERAALTALAATAL 87

Query: 180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 239
           +  R A       V ++G G +GL+    A+A GA  +V VD D  R  +A+ +G  + V
Sbjct: 88  NGVRDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPV 147

Query: 240 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM 299
                  D A+E+       G G DV  + +G    + TAL      G+V LVG    + 
Sbjct: 148 A-----ADTADEI------GGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKP 196

Query: 300 TVPLTPAAVREVDVV-----GVFRYKNTWP----------LCLELLRSGKIDVKPLVTHR 344
            +       + + +      G+ RY    P            L+LL  G+++   L+THR
Sbjct: 197 LLLGEEFHFKRLPIRSSQVYGIGRY--DRPRRWTEARNLEEALDLLAEGRLE--ALITHR 252

Query: 345 FGFSQKEVEEAFET-SARGGTAIKVMF 370
             F   +  EA+          +KV+ 
Sbjct: 253 VPFE--DAPEAYRLLFEDPPECLKVVL 277

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  117 bits (296), Expect = 3e-30
 Identities = 87/335 (25%), Positives = 150/335 (44%), Gaps = 35/335 (10%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
            +I+    P  G  +V++++   G+C  D   L  L+     +K P+++GHE  G +E+V
Sbjct: 13  YRIEEVPDPKPGKDEVVIKVNYAGLCYRD---LLQLQGFYPRMKYPVILGHEVVGTVEEV 69

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 148
           G  VK   PGDRV       +   P      C++C+ G    C     +    + G  A 
Sbjct: 70  GENVKGFKPGDRVA-----SLLYAP---DGTCEYCRSGEEAYCKNRLGYGE-ELDGFFAE 120

Query: 149 QVVHPADLCFKLPDNVSLEEGAMCEP--LSVGVHACRRANIGPETNVLIMGA-GPIGLVT 205
                     K+P NVS +EGA+  P    +     RRA +     VL+ GA G +G+  
Sbjct: 121 YAKVKVTSLVKVPPNVS-DEGAVIVPCVTGMVYRGLRRAGVKKGETVLVTGAGGGVGIHA 179

Query: 206 MLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 265
           +  A+A GA +++ V   + +  +  +  AD ++  S      +EEV+KI      G D+
Sbjct: 180 IQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGSK----FSEEVKKIG-----GADI 228

Query: 266 SFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVFR-YKNT 322
             +  G   T+  +L +   GGK+  +G      T  L    +  ++++++G     K  
Sbjct: 229 VIETVG-TPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRD 287

Query: 323 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 357
               L+L+  GKI  KP++      S  E+++A E
Sbjct: 288 VEEALKLVAEGKI--KPVIGAEVSLS--EIDKALE 318

Length = 334

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score =  112 bits (281), Expect = 7e-28
 Identities = 90/355 (25%), Positives = 149/355 (41%), Gaps = 63/355 (17%)

Query: 41  PYDVLVRMKAVGICGSDVHYLK---TLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97
             +V +++    +C +DV++ +         F    P ++GHE AG++E VG  V  L P
Sbjct: 27  AMEVRIKILHTSLCHTDVYFWEAKGQTPL--F----PRILGHEAAGIVESVGEGVTDLKP 80

Query: 98  GDRVTLV-PGDRVALEPGISCWRCDHCKGGRYNLCPEMKF--------------FAT--P 140
           GD V  V  G+         C  C HCK  + N+C  ++               F+    
Sbjct: 81  GDHVLPVFTGE---------CKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGK 131

Query: 141 PVHGSLANQ------VVHPADLCFKLPDNVSLEEGAMCEPLSVGVH-----ACRRANIGP 189
           P++  +         VVH   +  K+     L++  +   LS GV      A   A +  
Sbjct: 132 PIYHFVGTSTFSEYTVVHVGCVA-KINPEAPLDKVCL---LSCGVSTGLGAAWNVAKVKK 187

Query: 190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIA 249
            + V I G G +GL     AR  GA RI+ VD++  +   AK+ G    V    N +D  
Sbjct: 188 GSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFV----NPKDHD 243

Query: 250 EEVEKIQKAM-GTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPLTPAA 307
           + V+++   M G G+D SF+C G    M +A      G G   L+G+ H +      P  
Sbjct: 244 KPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMN 303

Query: 308 V-REVDVVGVF----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 357
           +     + G      + K   P  +E     +++++  +TH   FS  E+ +AF+
Sbjct: 304 LLNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFS--EINKAFD 356

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score =  111 bits (279), Expect = 9e-28
 Identities = 102/360 (28%), Positives = 154/360 (42%), Gaps = 64/360 (17%)

Query: 36  LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95
           +P  GP +V+V ++A G+C +D+HY +     +F    P ++GHE AGV+E VG  V   
Sbjct: 21  VPDPGPGEVIVDIQACGVCHTDLHYREGGINDEF----PFLLGHEAAGVVEAVGEGV--- 73

Query: 96  VPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH------------ 143
                  + PGD V L     C +C  CK GR   C +    AT  +             
Sbjct: 74  -----TDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFD-THNATQKMTLTDGTELSPALG 127

Query: 144 -GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHA-----CRRANIGPETNVLIMG 197
            G+ A + +  A  C K+          +   L  GV A          +    +V ++G
Sbjct: 128 IGAFAEKTLVHAGQCTKVDPAADPAAAGL---LGCGVMAGLGAAVNTGGVKRGDSVAVIG 184

Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 257
            G +G   +  A   GA +I+ VD+DD +L  A+E GA + V  S       + VE I+ 
Sbjct: 185 CGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGT-----DPVEAIRA 239

Query: 258 AM-GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 316
              G G DV  D  G  +T   A  A    G V LVG+   +MT+        E+ ++ V
Sbjct: 240 LTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTL--------ELPLLDV 291

Query: 317 FRY----KNTW----------PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 362
           F      K++W          P+ ++L   G++ +   VT R G     VEEAF+    G
Sbjct: 292 FGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDD--VEEAFDKMHAG 349

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  108 bits (271), Expect = 6e-27
 Identities = 91/365 (24%), Positives = 133/365 (36%), Gaps = 73/365 (20%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP 74
           M A  +    G   L++     P  GP +VLV++ A G+   D+   + L  A F +  P
Sbjct: 1   MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLP 60

Query: 75  MVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM 134
           ++ GH+ AGV+  VG  V     GD V                                 
Sbjct: 61  LIPGHDVAGVVVAVGPGVTGFKVGDEV--------------------------------- 87

Query: 135 KFFATPPVH--GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV-----GVHACRRANI 187
             F   P    G+ A  VV PAD     P N+S EE A   PL+       +       +
Sbjct: 88  --FGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAAL-PLAGLTAWQALF--ELGGL 142

Query: 188 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ 246
                VLI GA G +G   +  A+A GA   VI           + +GAD ++  +    
Sbjct: 143 KAGQTVLIHGAAGGVGSFAVQLAKARGA--RVIATASAANADFLRSLGADEVIDYTKGDF 200

Query: 247 DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGK-VCLVGMGHHEMTVPLTP 305
           + A            G+D   D  G  +T++ +L     GG+ V + G            
Sbjct: 201 ERAAAPG--------GVDAVLDTVG-GETLARSLALVKPGGRLVSIAG-----PPPAEQA 246

Query: 306 AAVREVDVVGVFRYKNTWPL--CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG 363
           A  R V    VF   +   L    EL+ +GK+  +P+V   F     +  EA E    G 
Sbjct: 247 AKRRGVRAGFVFVEPDGEQLAELAELVEAGKL--RPVVDRVFPLE--DAAEAHERLESGH 302

Query: 364 TAIKV 368
              KV
Sbjct: 303 ARGKV 307

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score =  107 bits (269), Expect = 3e-26
 Identities = 91/348 (26%), Positives = 150/348 (43%), Gaps = 53/348 (15%)

Query: 42  YDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV 101
           ++V +++ A GIC SD H +        V   P+++GHE AG++E VG  V T+ PGD+V
Sbjct: 33  HEVRIKIVATGICRSDDHVVSGK----LVTPFPVILGHEAAGIVESVGEGVTTVKPGDKV 88

Query: 102 T--LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT---------------PPVH- 143
               VP           C +C  C     NLC +                      P+H 
Sbjct: 89  IPLFVP----------QCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHH 138

Query: 144 ----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGV-HACRRANIGPETNVLIM 196
                + +   V       K+     LE+  +  C   S G   A   A + P +   + 
Sbjct: 139 FLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCG-FSTGYGAAVNTAKVTPGSTCAVF 197

Query: 197 GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV-EKI 255
           G G +GL  ++  +A GA RI+ VD++  + + AKE+GA   +    N QD  + + E +
Sbjct: 198 GLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECI----NPQDYKKPIQEVL 253

Query: 256 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVC-LVGMGHHEMTVPLTPAAV---REV 311
            +    G+D SF+  G   TM  AL +   G  V  +VG+      + + P  +   R  
Sbjct: 254 TEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTW 313

Query: 312 D--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 357
              V G ++ K++ P  +    + K ++ PL+TH   F +  + E F+
Sbjct: 314 KGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEK--INEGFD 359

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score =  105 bits (264), Expect = 2e-25
 Identities = 93/365 (25%), Positives = 158/365 (43%), Gaps = 63/365 (17%)

Query: 31  IQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE-PMVIGHECAGVIEKVG 89
           ++  EL      +VLV++ A G+C SD H    L   D  +   P++ GHE AGV+ KVG
Sbjct: 16  VEEIELDDPKAGEVLVKLVASGLCHSDEH----LVTGDLPMPRYPILGGHEGAGVVTKVG 71

Query: 90  SEVKTLVPGDRV--TLVPGDRVALEPGISCWRCDHCKGGRYNLCPE--------MKFFAT 139
             V  + PGD V  + +P          +C RC  C  G  NLC               T
Sbjct: 72  PGVTGVKPGDHVVLSFIP----------ACGRCRWCSTGLQNLCDLGAALLTGSQISDGT 121

Query: 140 PPVH------------GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV-----HAC 182
              H            G+ +   V P     K+ D++ L++  +   +  GV      A 
Sbjct: 122 YRFHADGQDVGQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACL---VGCGVPTGWGSAV 178

Query: 183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 242
             A++ P   V++MG G +G+  +  A   GA +++ VD  +++   A + GA +     
Sbjct: 179 NIADVRPGDTVVVMGIGGVGINAVQGAAVAGARKVIAVDPVEFKREQALKFGATHAF--- 235

Query: 243 TNLQDIAEEVEKIQKAM-GTGIDVSFDCAGLNK--TMSTALGATCAGGKVCLVGMGHHE- 298
                + E V+ +++   G G D +    G      ++ AL AT  GG+V + G+G    
Sbjct: 236 ---ASMEEAVQLVRELTNGQGADKTIITVGEVDGEHIAEALSATRKGGRVVVTGLGPMAD 292

Query: 299 --MTVPLTPAAVREVDVVG-VFRYKNT---WPLCLELLRSGKIDVKPLVTHRFGFSQKEV 352
             + V L    + + ++ G +F   N     P  LEL R+GK+ +  L+T    ++  ++
Sbjct: 293 VDVKVNLFELTLLQKELQGTLFGGANPRADIPRLLELYRAGKLKLDELITRT--YTLDQI 350

Query: 353 EEAFE 357
            E ++
Sbjct: 351 NEGYQ 355

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score =  103 bits (260), Expect = 4e-25
 Identities = 88/287 (30%), Positives = 141/287 (49%), Gaps = 28/287 (9%)

Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
            L  L   + LV+M+  G+C +D+H    +   DF  K   ++GHE  G++++VG  V +
Sbjct: 19  TLRPLKHGEALVKMEYCGVCHTDLH----VANGDFGDKTGRILGHEGIGIVKEVGPGVTS 74

Query: 95  LVPGDRVTLVPGDRVA--LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 152
           L  GDRV+      +A   E    C  C++C  GR  LC  +K  A   V G +A Q + 
Sbjct: 75  LKVGDRVS------IAWFFE---GCGHCEYCTTGRETLCRSVK-NAGYTVDGGMAEQCIV 124

Query: 153 PADLCFKLPDNVSLEEGAMCEPLSVGV---HACRRANIGPETNVLIMGAGPIG-LVTMLA 208
            AD   K+P+   L+          GV    A + + I P   + I GAG +G L    A
Sbjct: 125 TADYAVKVPEG--LDPAQASSITCAGVTTYKAIKVSGIKPGQWIAIYGAGGLGNLALQYA 182

Query: 209 ARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 268
              F A +++ VD++D +L++AKE+GAD  +  S  ++D+A+    IQ+  G G   +  
Sbjct: 183 KNVFNA-KVIAVDINDDKLALAKEVGADLTIN-SKRVEDVAKI---IQEKTG-GAHAAVV 236

Query: 269 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 315
            A      + A+ A  AGG+V  VG+    M + +    +  ++VVG
Sbjct: 237 TAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVG 283

Length = 338

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  103 bits (258), Expect = 7e-25
 Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 23/227 (10%)

Query: 19  MAAWLL------GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVV- 71
           M A +L        N L++    +P  GP +VL++++A G+C +D+H ++     D    
Sbjct: 1   MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVE----GDLPPP 56

Query: 72  KEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLC 131
           K P++ GHE  G +E VG  V     GDRV +          G +C  C +C+ GR NLC
Sbjct: 57  KLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPW-------LGSTCGECRYCRSGRENLC 109

Query: 132 PEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGP 189
              +F     V G  A  +V      + +P++   EE A  +C  + +G  A + A + P
Sbjct: 110 DNARFTGY-TVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGI-IGYRALKLAGLKP 167

Query: 190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD 236
              + + G G    + +  AR  GA  +           +A+E+GAD
Sbjct: 168 GQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGAD 213

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score =  101 bits (254), Expect = 2e-24
 Identities = 93/344 (27%), Positives = 141/344 (40%), Gaps = 70/344 (20%)

Query: 44  VLVRMKAVGICGSDVHYLKTLRCAD---FVVKEPMVIGHECAGVIEKVGSEVKTLVPGDR 100
           V +R++A G+   D+     L            P V G E AGV+E VG  V     GDR
Sbjct: 30  VRIRVEAAGVNFPDL-----LMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGFKVGDR 84

Query: 101 VTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL 160
           V                                    A     G  A +VV PA   F L
Sbjct: 85  V-----------------------------------VALTG-QGGFAEEVVVPAAAVFPL 108

Query: 161 PDNVSLEEGAMCEPLSVGV--HAC-RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPR 216
           PD +S EE A   P++ G   HA  RRA + P   VL++GA G +GL  +  A+A GA R
Sbjct: 109 PDGLSFEEAA-ALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-R 166

Query: 217 IVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTM 276
           ++     + +L++A+ +GAD+++       D+ E V+ +    G G+DV +D  G     
Sbjct: 167 VIAAASSEEKLALARALGADHVIDYRD--PDLRERVKALTG--GRGVDVVYDPVGG-DVF 221

Query: 277 STALGATCAGGKVCLVGM-GHHEMTVPLTPAAVREVDVVGVF----------RYKNTWPL 325
             +L +   GG++ ++G        +P     ++ + VVGV+            +     
Sbjct: 222 EASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAE 281

Query: 326 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 369
             +LL  GKI  +P V+  F   Q    EA    A      KV+
Sbjct: 282 LFDLLAEGKI--RPHVSAVFPLEQ--AAEALRALADRKATGKVV 321

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 96.2 bits (240), Expect = 3e-24
 Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 6/133 (4%)

Query: 200 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 259
            +GL  +  A+A GA R++ VD  + +L +AKE+GAD+++      +D  E V ++    
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRD--EDFVERVRELTG-- 56

Query: 260 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAAVREVDVVGVFR 318
           G G+DV  DC G   T+  AL     GG+V +VG+ G   +  PL    ++E+ ++G   
Sbjct: 57  GRGVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRDLLLKELTILGSLG 116

Query: 319 YK-NTWPLCLELL 330
                +   LELL
Sbjct: 117 GGREEFEEALELL 129

Length = 131

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 99.5 bits (249), Expect = 1e-23
 Identities = 99/369 (26%), Positives = 155/369 (42%), Gaps = 56/369 (15%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADF 69
           M AW L    G++ LK+    +P  GP +VLVR+ AV +   D+      Y         
Sbjct: 1   MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYP-------P 53

Query: 70  VVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV-TLVPGDRVALEPGISCWRCDHCKGGRY 128
            VK+P++   + AG +  VG  V     GDRV      + +   P           GG  
Sbjct: 54  PVKDPLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASAL--GG-- 109

Query: 129 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHA----CRR 184
                       P+ G LA  VV P +   + PD++S EE A   P + G+ A       
Sbjct: 110 ------------PIDGVLAEYVVLPEEGLVRAPDHLSFEEAA-TLPCA-GLTAWNALFGL 155

Query: 185 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN 244
             + P   VL+ G G + L  +  A+A GA R++     D +L  AK +GAD+++   T 
Sbjct: 156 GPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRTT 214

Query: 245 LQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPL 303
             D  EEV K+    G G+D   +  G   T++ ++ A   GG + L+G +   E  V L
Sbjct: 215 P-DWGEEVLKLTG--GRGVDHVVEVGG-PGTLAQSIKAVAPGGVISLIGFLSGFEAPVLL 270

Query: 304 TPAAVREVDVVGVF---RYKNTWPLCLELLRS-GKIDVKPLVTHRFGFSQKEVEEAFETS 359
            P   +   + G+    R          + R+     ++P++   F F  +E +EA+   
Sbjct: 271 LPLLTKGATLRGIAVGSR-----AQFEAMNRAIEAHRIRPVIDRVFPF--EEAKEAYRYL 323

Query: 360 ARGGTAIKV 368
             G    KV
Sbjct: 324 ESGSHFGKV 332

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 99.6 bits (249), Expect = 2e-23
 Identities = 88/382 (23%), Positives = 131/382 (34%), Gaps = 93/382 (24%)

Query: 20  AAWLLGVNTLKIQPFE--LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           AA L G     +   +  +P  GP +VLV++KAV +   D  +        F+   P ++
Sbjct: 3   AAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQD----YGFIPSYPAIL 58

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
           G + AG + +VGS V     GDRV                       GG  N        
Sbjct: 59  GCDFAGTVVEVGSGVTRFKVGDRV------------------AGFVHGGNPN-------- 92

Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA------------MCEPLSVGVHACRRA 185
              P +G+    VV  ADL  K+PDN+S EE A            + + L + +   + +
Sbjct: 93  --DPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPS 150

Query: 186 NIGPETNVLIMGAG-PIGLVTMLAARAFGAPRIVIVDVDDYRLSVA--------KEIGAD 236
                  VLI G    +G + +  A+  G    VI          A        K +GAD
Sbjct: 151 PASKGKPVLIWGGSSSVGTLAIQLAKLAGYK--VIT--------TASPKNFDLVKSLGAD 200

Query: 237 NIV--KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 294
            +               VE I+ A G  +  + DC    ++      A    G   LV +
Sbjct: 201 AVFDYHDPD-------VVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSL 253

Query: 295 GHHEMTVPLTPAAVREVDVVGVFRYKNT-------------WPLCLELLRSGKIDVKPLV 341
               + VP      + V V  V  Y                W    ELL  GK+   P+ 
Sbjct: 254 ----LPVPEETEPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVR 309

Query: 342 THRFGFSQKEVEEAFETSARGG 363
               G     V+E  +   +G 
Sbjct: 310 VVEGGLEG--VQEGLDLLRKGK 329

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 98.0 bits (245), Expect = 4e-23
 Identities = 92/349 (26%), Positives = 137/349 (39%), Gaps = 67/349 (19%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIEKVGSEVKT 94
           P+ GP +VLVR+ A G+   D +    +R   +      P V G + AGV+E VG  V  
Sbjct: 23  PTPGPGEVLVRVHASGVNPVDTY----IRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDG 78

Query: 95  LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA 154
           L  GDRV                W  +   G R                G+ A  VV PA
Sbjct: 79  LKVGDRV----------------WLTNLGWGRR---------------QGTAAEYVVVPA 107

Query: 155 DLCFKLPDNVSLEEGAMCEPLSVGVHAC-------RRANIGPETNVLIMG-AGPIGLVTM 206
           D    LPD VS E+GA     ++G+ A         RA       VL+ G +G +G   +
Sbjct: 108 DQLVPLPDGVSFEQGA-----ALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAV 162

Query: 207 LAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 266
             AR  GA R++          + ++ GAD +       +D+A+ +       G G+DV 
Sbjct: 163 QLARWAGA-RVIATASSAEGAELVRQAGADAVFNYRA--EDLADRILAATA--GQGVDVI 217

Query: 267 FDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT---W 323
            +    N  ++  L     GG++ + G G    T+P+ P   +E  + GV  Y  T    
Sbjct: 218 IEVLA-NVNLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEER 276

Query: 324 PLCLE----LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 368
               E     L  G +  +P++   +     E   A E    GG   KV
Sbjct: 277 AAAAEAIAAGLADGAL--RPVIAREYPLE--EAAAAHEAVESGGAIGKV 321

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 98.0 bits (245), Expect = 4e-23
 Identities = 96/360 (26%), Positives = 135/360 (37%), Gaps = 72/360 (20%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
            +++    P  GP  VLVR+ A G+   D    +    A      P ++G + AGV+E V
Sbjct: 15  FELREVPRPQPGPGQVLVRVHASGVNPLDTKIRR--GGAAARPPLPAILGCDVAGVVEAV 72

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 148
           G  V     GD V    G       G+         GG                 GSLA 
Sbjct: 73  GEGVTRFRVGDEVYGCAG-------GL---------GGL---------------QGSLAE 101

Query: 149 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHA----CRRANIGPETNVLIM-GAGPIGL 203
             V  A L    P N+S+ E A   PL VG+ A      RA +     VLI  GAG +G 
Sbjct: 102 YAVVDARLLALKPANLSMREAA-ALPL-VGITAWEGLVDRAAVQAGQTVLIHGGAGGVGH 159

Query: 204 VTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD-IAEEVEKIQKAMGTG 262
           V +  A+A GA   V       + + A+ +GAD I+     + + +AE         G G
Sbjct: 160 VAVQLAKAAGA--RVYATASSEKAAFARSLGADPIIYYRETVVEYVAEHTG------GRG 211

Query: 263 IDVSFDCAGLNKTMSTALGATCA-GGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF---- 317
            DV FD  G  +T+  +  A    G  V ++G   H     L P + R     GVF    
Sbjct: 212 FDVVFDTVG-GETLDASFEAVALYGRVVSILGGATH----DLAPLSFRNATYSGVFTLLP 266

Query: 318 ------RYKNTWPL--CLELLRSGKIDVKPLV-THRFGFSQKEVEEAFETSARGGTAIKV 368
                 R  +   L     L+  G++  +PL+    F     E   A      G    K+
Sbjct: 267 LLTGEGRAHHGEILREAARLVERGQL--RPLLDPRTFPLE--EAAAAHARLESGSARGKI 322

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 97.1 bits (243), Expect = 8e-23
 Identities = 75/273 (27%), Positives = 112/273 (41%), Gaps = 49/273 (17%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G   L+ +   +P  GP +VLVR  A+G+   D ++   L         P V+G E AGV
Sbjct: 10  GPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPLPL----PFVLGVEGAGV 65

Query: 85  IEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
           +E VG  V     GDRV                                   +A PP  G
Sbjct: 66  VEAVGPGVTGFKVGDRVA----------------------------------YAGPP--G 89

Query: 145 SLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMG-AGPI 201
           + A   V PA    KLPD +S E  A  + + L+          + P   VL+   AG +
Sbjct: 90  AYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGV 149

Query: 202 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 261
           GL+    A+A GA  I  V  ++ +  +A+  GAD+++    + +D  E V +I    G 
Sbjct: 150 GLLLTQWAKALGATVIGTVSSEE-KAELARAAGADHVI-NYRD-EDFVERVREITG--GR 204

Query: 262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 294
           G+DV +D  G   T   +L +    G +   G 
Sbjct: 205 GVDVVYDGVG-KDTFEGSLDSLRPRGTLVSFGN 236

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score = 97.7 bits (244), Expect = 9e-23
 Identities = 92/348 (26%), Positives = 150/348 (43%), Gaps = 56/348 (16%)

Query: 44  VLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTL 103
           V +++ A G+C +D +   TL  AD     P+++GHE AG++E VG  V ++ PGD V  
Sbjct: 30  VRIKILATGVCHTDAY---TLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPGDHVIP 86

Query: 104 --VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF----------------ATPPVH-- 143
              P           C  C  CK G+ NLC +++                    P  H  
Sbjct: 87  LYTP----------ECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFM 136

Query: 144 --GSLAN-QVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH-----ACRRANIGPETNVLI 195
              + +   VV    +  K+     L++  +   L  GV          A + P + V +
Sbjct: 137 GTSTFSEYTVVAEISVA-KINPEAPLDKVCL---LGCGVTTGYGAVLNTAKVEPGSTVAV 192

Query: 196 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 255
            G G +GL  +  A+A GA RI+ +D++  +  +AK+ GA + V    + + I    + +
Sbjct: 193 FGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDHDKPI---QQVL 249

Query: 256 QKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGM---GHHEMTVP--LTPAAVR 309
            +    G+D +F+C G  K M  AL A   G G   ++G+   G    T P  L    V 
Sbjct: 250 VEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVW 309

Query: 310 EVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 357
           +    G ++ ++  P  +E    GKI V   +TH       E+ EAF+
Sbjct: 310 KGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPL--DEINEAFD 355

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 97.3 bits (242), Expect = 1e-22
 Identities = 82/326 (25%), Positives = 146/326 (44%), Gaps = 32/326 (9%)

Query: 34  FELPSLGPYDVLVRMKAVGICGSDV-HYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV 92
            E+P LG  DV+V++   G+C +D+ +Y   +R        P+ +GHE +G + + G+  
Sbjct: 16  VEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRT---NHALPLALGHEISGRVIQAGAGA 72

Query: 93  KTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 152
            + +         G  V +   I C  C+ CK GR  +C   K      + G  A+ +V 
Sbjct: 73  ASWI---------GKAVIVPAVIPCGECELCKTGRGTICRAQKMPGN-DMQGGFASHIVV 122

Query: 153 PAD-LCFKLPDNVSLEEGAM--------CEPLSVGVHACRRANIGPETNVLIMGAGPIGL 203
           PA  LC  + D   L    +         + ++    A  +A +     V+++GAG +G 
Sbjct: 123 PAKGLC--VVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQAGLKKGDLVIVIGAGGVGG 180

Query: 204 VTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV-STNLQDIAEEVEKIQKAMG-- 260
             +  A+A GA  +V +D+D  +L + K  GAD  +     + +++ + ++   KA G  
Sbjct: 181 YMVQTAKAMGAA-VVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLR 239

Query: 261 -TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR- 318
            TG  + F+C+G      +AL     GG + +VG    +    L+         +G +  
Sbjct: 240 STGWKI-FECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGC 298

Query: 319 YKNTWPLCLELLRSGKIDVKPLVTHR 344
             + +P  L+L+  GKI + P V  R
Sbjct: 299 PPDRYPAALDLVLDGKIQLGPFVERR 324

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 96.7 bits (241), Expect = 1e-22
 Identities = 87/291 (29%), Positives = 128/291 (43%), Gaps = 47/291 (16%)

Query: 19  MAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM 75
           M A +    G+  LK++  + P  GP +VL+R+K  G+   D          + V  +PM
Sbjct: 1   MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVD------YNVINAVKVKPM 54

Query: 76  --VIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE 133
             + G E AGV+E+VG  VK +  GDRV +    RV          CD C  G   LC  
Sbjct: 55  PHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYN--RVF------DGTCDMCLSGNEMLCRN 106

Query: 134 MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV----HACRRANIGP 189
                    +G  A  +V P    FK+PD++S E  A    L V      HA + A +GP
Sbjct: 107 GGIIGV-VSNGGYAEYIVVPEKNLFKIPDSISDELAA---SLPVAALTAYHALKTAGLGP 162

Query: 190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 248
              V++ GA G  G+  +  A+  GA  I +      R    KE GAD +V       ++
Sbjct: 163 GETVVVFGASGNTGIFAVQLAKMMGAEVIAVS-----RKDWLKEFGADEVVDYD----EV 213

Query: 249 AEEVEKIQK-------AMGTGI-DVSFDCAGLNKTMSTALGATCAGGKVCL 291
            E+V++I K       ++G+   D+S    G    + T    T  GG+V L
Sbjct: 214 EEKVKEITKMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLT--GGEVKL 262

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 96.1 bits (240), Expect = 2e-22
 Identities = 74/290 (25%), Positives = 117/290 (40%), Gaps = 53/290 (18%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVVKEPMVIGHECAG 83
           L+I+   +P+ G  +VL+R++A+G+  +D       Y+            P  +G+E AG
Sbjct: 15  LRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYI-------EPPPLPARLGYEAAG 67

Query: 84  VIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 143
           V+E VG+ V     GDRV+++P               D  + G Y               
Sbjct: 68  VVEAVGAGVTGFAVGDRVSVIP-------------AADLGQYGTY--------------- 99

Query: 144 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHAC--RRANIGPETNVLIMGA-GP 200
              A   + PA    KLPD +S  E A      +  +      A + P  +VLI  A   
Sbjct: 100 ---AEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSS 156

Query: 201 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 260
           +GL  +  A A GA  I      + R      +GA ++  + T+ +D+  EV +I    G
Sbjct: 157 VGLAAIQIANAAGATVIATTRTSEKR-DALLALGAAHV--IVTDEEDLVAEVLRI--TGG 211

Query: 261 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVR 309
            G+DV FD  G     +    A   GG + + G +       PL  A  +
Sbjct: 212 KGVDVVFDPVG-GPQFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKK 260

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score = 96.4 bits (240), Expect = 2e-22
 Identities = 98/368 (26%), Positives = 154/368 (41%), Gaps = 47/368 (12%)

Query: 19  MAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
             AW  G   LKI+  ++      +VLVR+ A G+C +D     TL  AD     P+++G
Sbjct: 5   AVAWAAG-QPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAF---TLSGADPEGVFPVILG 60

Query: 79  HECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK--- 135
           HE AG++E VG  V ++  GD V       + L     C  C  C  G+ NLC  ++   
Sbjct: 61  HEGAGIVEAVGEGVTSVKVGDHV-------IPLYTA-ECGECKFCLSGKTNLCVAVRETQ 112

Query: 136 ------------FFATPPVH-----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLS 176
                            P++      + +   V P     K+     LEE  +  C  ++
Sbjct: 113 GKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCG-VT 171

Query: 177 VGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 235
            G+ A    A +     V + G G IGL  +  AR   A RI+ +D++  +  +AK++GA
Sbjct: 172 TGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGA 231

Query: 236 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGM 294
            + V  +   + I E + +I      G+D SF+C G    M  AL     G G+  ++G+
Sbjct: 232 TDCVNPNDYDKPIQEVIVEITDG---GVDYSFECIGNVNVMRAALECCHKGWGESIIIGV 288

Query: 295 ---GHHEMTVP--LTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQ 349
              G    T P  L    V      G  + +   P  +E    G+I +   VTH      
Sbjct: 289 AGAGQEISTRPFQLVTGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLED 348

Query: 350 KEVEEAFE 357
             + EAF+
Sbjct: 349 --INEAFD 354

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score = 96.8 bits (241), Expect = 2e-22
 Identities = 96/358 (26%), Positives = 154/358 (43%), Gaps = 54/358 (15%)

Query: 40  GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99
              +V +++    IC +D+   K    A      P ++GHE AG++E VG  V+ L  GD
Sbjct: 34  QKMEVRIKILYTSICHTDLSAWKGENEAQ--RAYPRILGHEAAGIVESVGEGVEDLKAGD 91

Query: 100 RVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM---------------KFFAT----P 140
            V       + +  G  C  C +CK  + NLC                  +F       P
Sbjct: 92  HV-------IPIFNG-ECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQP 143

Query: 141 PVH----GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH-----ACRRANIGPET 191
             H     +     V  +    K+  N  L++  M   LS GV      A   AN+   +
Sbjct: 144 IYHFLNTSTFTEYTVLDSACVVKIDPNAPLKK--MSL-LSCGVSTGVGAAWNTANVQAGS 200

Query: 192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE 251
           +V I G G +GL     ARA GA +I+ VD++  +    KE+G  + +    N +D  + 
Sbjct: 201 SVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFI----NPKDSDKP 256

Query: 252 V-EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPLTPAAV- 308
           V E+I++  G G+D SF+CAG  + +  A  +T  G G   L+G+      +PL P  + 
Sbjct: 257 VHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELF 316

Query: 309 --REV--DVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 362
             R +   V G F+ K+  P   +    G +++   +TH   F   ++ EAF+    G
Sbjct: 317 DGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFE--KINEAFQLLEDG 372

Length = 381

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 89.6 bits (223), Expect = 5e-20
 Identities = 76/288 (26%), Positives = 116/288 (40%), Gaps = 40/288 (13%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTLRC-----ADFVVKEPMVIGHECAGVIEKVGSE 91
           P   P +VLVR   VG+CG+D   +           DF     +V+GHE  GV+E+VG  
Sbjct: 21  PEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDF-----LVLGHEALGVVEEVGDG 75

Query: 92  VKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQ 149
              L PGD V  VP  R          +C +C+ GR + C   ++       +HG +   
Sbjct: 76  -SGLSPGDLV--VPTVRR------PPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREY 126

Query: 150 VVHPADLCFKLPDNVSLEEGAMCEPLSVGVHA-------CRRANIGPETNVLIMGAGPIG 202
            V   +   K+P +++ + G + EPLSV   A        +R         L++GAGPIG
Sbjct: 127 FVDDPEYLVKVPPSLA-DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIG 185

Query: 203 LVTMLAARAFGAPRIVI--VDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 260
           L+  L  R  G    V+   D  D +  + +E+GA  +     N         K+     
Sbjct: 186 LLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYV-----NSSKTPVAEVKLVGEF- 239

Query: 261 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV 308
              D+  +  G+      AL A    G V L G+        +    +
Sbjct: 240 ---DLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGEL 284

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 86.9 bits (216), Expect = 3e-19
 Identities = 82/369 (22%), Positives = 128/369 (34%), Gaps = 71/369 (19%)

Query: 19  MAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM 75
           +     G   V  L      +P+  P +VLV++ A  +   D    +           P 
Sbjct: 1   VVYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPP 60

Query: 76  VIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK 135
           + G + AG +  VGS V     GD V                          +   P   
Sbjct: 61  IPGMDFAGEVVAVGSGVTRFKVGDEV--------------------------FGRLPPKG 94

Query: 136 FFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHAC----RRANIGPET 191
                   G+LA  VV P     K P+ VS EE A   P++ G+ A         + P  
Sbjct: 95  G-------GALAEYVVAPESGLAKKPEGVSFEEAA-ALPVA-GLTALQALRDAGKVKPGQ 145

Query: 192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVD----VDDYRLSVAKEIGADNIVKVSTNLQ 246
            VLI GA G +G   +  A+A GA  +  V      +     + + +GAD ++  +T  +
Sbjct: 146 RVLINGASGGVGTFAVQIAKALGA-HVTGVCSTRNAE-----LVRSLGADEVIDYTT--E 197

Query: 247 DIAEEVEKIQKAMGTGIDVSFDCAGLNK-TMSTALGATCAGGKVCLVGMGHHEMTVPLTP 305
           D        +K      DV FD  G +  ++  A  A   GG+   VG G   + + L  
Sbjct: 198 DFVALTAGGEK-----YDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLL 252

Query: 306 AAV------REVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS 359
             +      R +                EL+  GK+  KP++   +     +  EA+   
Sbjct: 253 LPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKL--KPVIDSVYPLE--DAPEAYRRL 308

Query: 360 ARGGTAIKV 368
             G    KV
Sbjct: 309 KSGRARGKV 317

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 85.7 bits (212), Expect = 1e-18
 Identities = 76/275 (27%), Positives = 122/275 (44%), Gaps = 29/275 (10%)

Query: 40  GPYDVLVRMKAVGICGSDVHYLKTLRCADF-VVKEPMVIGHECAGVIEKVGSEVKTLVPG 98
           G  DV V++   G+C SD+H +K     ++   + P+V GHE  G++ K+G  VK    G
Sbjct: 36  GDEDVTVKILYCGVCHSDLHTIKN----EWGFTRYPIVPGHEIVGIVTKLGKNVKKFKEG 91

Query: 99  DRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH------GSLANQVVH 152
           DRV       V +  G SC  C+ C     N CP+M F      H      G  ++ +V 
Sbjct: 92  DRVG------VGVIVG-SCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVV 144

Query: 153 PADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAAR 210
                 + PDN+ L+ GA  +C  ++V           P  ++ + G G +G V +   +
Sbjct: 145 DQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGK 204

Query: 211 AFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 270
           AFG    VI    +        +GAD+ + VST+        EK++ A+GT +D   D  
Sbjct: 205 AFGLKVTVISSSSNKEDEAINRLGADSFL-VSTD-------PEKMKAAIGT-MDYIIDTV 255

Query: 271 GLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP 305
                +   LG     GK+  +G+    + +P+ P
Sbjct: 256 SAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFP 290

Length = 360

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 84.3 bits (209), Expect = 3e-18
 Identities = 81/360 (22%), Positives = 134/360 (37%), Gaps = 67/360 (18%)

Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
            L++    +P  GP +VLVRM A  I  SD+  +            P V G+E  GV+ +
Sbjct: 13  VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGA--YGSRPPLPAVPGNEGVGVVVE 70

Query: 88  VGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 147
           VGS V  L+ G RV  + G+                                    G+  
Sbjct: 71  VGSGVSGLLVGQRVLPLGGE------------------------------------GTWQ 94

Query: 148 NQVVHPADLCFKLPDNVSLEEGAMC--EPLSVGVHACRRANIGPETNVLIMGAGPIGLVT 205
             VV PAD    +PD++S E+ AM    PL+  +         P  + +I  A    +  
Sbjct: 95  EYVVAPADDLIPVPDSISDEQAAMLYINPLTAWL-MLTEYLKLPPGDWVIQNAANSAVGR 153

Query: 206 MLA--ARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 263
           ML   A+  G   I +V  D+    + K +GAD ++  S    D+A+ V++     G G 
Sbjct: 154 MLIQLAKLLGFKTINVVRRDEQVEEL-KALGADEVIDSSPE--DLAQRVKEATG--GAGA 208

Query: 264 DVSFDCAGLNKTMSTALGATCAGGKVCLV--GMGHHEMTVPLTPAAVREVDVVGVF---- 317
            ++ D  G     +T L  +   G   +    +    +  P +    +++ V G +    
Sbjct: 209 RLALDAVG--GESATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQW 266

Query: 318 ---RYKNTWPLCLE----LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 370
                K            L+ +G +     V  +F     + EEA   + + G   KV+ 
Sbjct: 267 LHSATKEAKQETFAEVIKLVEAGVL--TTPVGAKFPLE--DFEEAVAAAEQPGRGGKVLL 322

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 83.6 bits (208), Expect = 4e-18
 Identities = 74/288 (25%), Positives = 113/288 (39%), Gaps = 77/288 (26%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVVKEPM---- 75
           G   L++     P+ GP +VL+R+ A G+  +D+      Y             P     
Sbjct: 11  GPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLY-------------PPPPGA 57

Query: 76  --VIGHECAGVIEKVGSEVKTLVPGDRVT-LVPGDRVALEPGISCWRCDHCKGGRYNLCP 132
             ++G E AGV+  VG  V     GDRV  L+ G                  GG Y    
Sbjct: 58  SDILGLEVAGVVVAVGPGVTGWKVGDRVCALLAG------------------GG-Y---- 94

Query: 133 EMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGVHA-CRRANIGPE 190
                         A  VV PA     +P+ +SL E A + E          +   +   
Sbjct: 95  --------------AEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAG 140

Query: 191 TNVLIM-GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIA 249
             VLI  GA  +G   +  A+A GA  I     ++ +L   + +GAD  V ++   +D A
Sbjct: 141 ETVLIHGGASGVGTAAIQLAKALGARVIATAGSEE-KLEACRALGAD--VAINYRTEDFA 197

Query: 250 EEVEKIQKAMGTGIDVSFDCAG---LNKTMSTALGATCAGGKVCLVGM 294
           EEV++     G G+DV  D  G   L + +  AL      G++ L+G+
Sbjct: 198 EEVKEATG--GRGVDVILDMVGGDYLARNLR-ALA---PDGRLVLIGL 239

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score = 84.2 bits (208), Expect = 5e-18
 Identities = 92/380 (24%), Positives = 156/380 (41%), Gaps = 78/380 (20%)

Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G   L ++  E+    P ++ +++ +  +C SD+   ++   A F    P + GHE
Sbjct: 18  AWGAG-EALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ--ALF----PRIFGHE 70

Query: 81  CAGVIEKVGSEVKTLVPGDRV-TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----- 134
            +G++E +G  V     GD V T+  G+         C  C HC  G+ N+C  +     
Sbjct: 71  ASGIVESIGEGVTEFEKGDHVLTVFTGE---------CGSCRHCISGKSNMCQVLGLERK 121

Query: 135 -----------KFFATPPVH----GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV 179
                           P  H     S +   V  +    K+     L +  +   LS GV
Sbjct: 122 GVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICL---LSCGV 178

Query: 180 HA-----CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG 234
            A        A++   ++V+I G G +GL     A+  GA +I+ VD++  +   AK  G
Sbjct: 179 AAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFG 238

Query: 235 ADNIVKVSTNLQDIAEEVEKIQKAM-GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG 293
             + +    N  D++E ++++ K M G G D SF+C G     +TAL +   G       
Sbjct: 239 VTDFI----NPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWG----- 289

Query: 294 MGHHEMTVPL-TPAAVREVD---------------VVGVFRYKNTWPLCLELLRSGKIDV 337
                +TV L  P A  EV                + G ++ K+  P  ++   + +I +
Sbjct: 290 -----LTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMI 344

Query: 338 KPLVTHRFGFSQKEVEEAFE 357
              +TH   F   E+ +AFE
Sbjct: 345 DEFITHNLSFD--EINKAFE 362

Length = 378

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 82.7 bits (205), Expect = 9e-18
 Identities = 71/264 (26%), Positives = 118/264 (44%), Gaps = 26/264 (9%)

Query: 34  FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93
            ++P  GP +VL++++A G+C SD         A   +  P V GHE  G I+ VG  V 
Sbjct: 18  RDVPLPGPGEVLIKVEACGVCHSDAF---VKEGAMPGLSYPRVPGHEVVGRIDAVGEGVS 74

Query: 94  TLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVV 151
               GDRV       V    G  C  CD C+ G +  C   K      V   G  A  ++
Sbjct: 75  RWKVGDRVG------VGWHGG-HCGTCDACRRGDFVHCENGKV---TGVTRDGGYAEYML 124

Query: 152 HPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAA 209
            PA+   ++PD++   E A  +C  ++   +A R +   P   V + G G +G + +  A
Sbjct: 125 APAEALARIPDDLDAAEAAPLLCAGVTT-FNALRNSGAKPGDLVAVQGIGGLGHLAVQYA 183

Query: 210 RAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 269
              G  R V +     +  +A+++GA     + T+ +D+AE +    + +G G  +    
Sbjct: 184 AKMGF-RTVAISRGSDKADLARKLGAH--HYIDTSKEDVAEAL----QELG-GAKLILAT 235

Query: 270 AGLNKTMSTALGATCAGGKVCLVG 293
           A   K +S  +G     GK+ ++G
Sbjct: 236 APNAKAISALVGGLAPRGKLLILG 259

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 81.1 bits (200), Expect = 6e-17
 Identities = 78/278 (28%), Positives = 128/278 (46%), Gaps = 41/278 (14%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYD-------VLVRMKAVGICGSDVHYLKTLRCADFV 70
           N     LG   +++Q  + P L   D       V++++    ICGSD H ++    A   
Sbjct: 3   NRGVVYLGPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTA--- 59

Query: 71  VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNL 130
               +V+GHE  G + + G +V+ +  GD V+ VP +       I+C RC +CK G   +
Sbjct: 60  -PTGLVLGHEITGEVIEKGRDVEFIKIGDIVS-VPFN-------IACGRCRNCKEGHTGV 110

Query: 131 C----PEMKFFATPPVH-----GSLANQVVHP-ADL-CFKLPD-NVSLEE----GAMCEP 174
           C    P     A   V      G  +  V+ P AD    K PD + +LE+      + + 
Sbjct: 111 CLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDI 170

Query: 175 LSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG 234
              G H    A +GP + V I GAGP+GL    +A+  GA  +++ D++  RL+ A+  G
Sbjct: 171 FPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFG 230

Query: 235 ADNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAG 271
            + +     +L   A   E+I++ +G   +D + DC G
Sbjct: 231 CETV-----DLSKDATLPEQIEQILGEPEVDCAVDCVG 263

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 79.1 bits (195), Expect = 1e-16
 Identities = 67/255 (26%), Positives = 101/255 (39%), Gaps = 20/255 (7%)

Query: 76  VIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK 135
           V+GHE  G +  +         G  +    G RV     + C RC  C+ G    C  ++
Sbjct: 1   VLGHEIVGEVVALRGGFTPADDGVPLR--LGQRVVWSVTVPCGRCFRCRRGLPQKCDSLR 58

Query: 136 ------FFATPPVHGSLANQVVHPADL-CFKLPDNV--SLEEGAMCEPLSVGVHACRRAN 186
                   +  P+ G  A     PA      +PD++  ++   A C   +V + A   A 
Sbjct: 59  KYGHEALDSGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATV-MAALEAAG 117

Query: 187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ 246
                 VL++GAG +GL    AA A GA R+V  D    R  +A   GA  + +      
Sbjct: 118 DLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEV--- 174

Query: 247 DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPA 306
            +AE    +Q   G G+DV+ + +G    +   L +   GG   L G       V L P 
Sbjct: 175 -LAERQGGLQN--GRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPE 231

Query: 307 AV--REVDVVGVFRY 319
            V  R + + GV  Y
Sbjct: 232 QVVRRWLTIRGVHNY 246

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|176200 cd08238, sorbose_phosphate_red, L-sorbose-1-phosphate reductase

 Score = 80.2 bits (198), Expect = 1e-16
 Identities = 63/239 (26%), Positives = 100/239 (41%), Gaps = 46/239 (19%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKT----LRCADFVVKEPM 75
           A  + G   L+++ FELP +   ++LVR+ +  +C S            +  + + KEP+
Sbjct: 5   AWRMYGKGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPV 64

Query: 76  VIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK 135
           ++GHE AG I KVG + +           PG R  ++P +       C G  Y       
Sbjct: 65  ILGHEFAGTILKVGKKWQG-------KYKPGQRFVIQPALILPDGPSCPGYSYTYP---- 113

Query: 136 FFATPPVHGSLANQVVHPADL----CFKLPDNVSLEEGAMCEPLS--VG-VHACRRANIG 188
                   G LA   + P ++    C  + +     E ++ EPLS  +G   A      G
Sbjct: 114 --------GGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPG 165

Query: 189 ---------PETNVLIMG-AGPIGLVTMLAARAFGAP----RIVIVDVDDYRLSVAKEI 233
                    P  N  I+G AGP+GL  M    A   P     +V+ DV+D RL+ A+ +
Sbjct: 166 EYRHRMGIKPGGNTAILGGAGPMGL--MAIDYAIHGPIGPSLLVVTDVNDERLARAQRL 222

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 410

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 78.0 bits (193), Expect = 3e-16
 Identities = 74/347 (21%), Positives = 121/347 (34%), Gaps = 78/347 (22%)

Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVT 102
           +V V +KA G+   DV     L     +  +   +G EC+G++ +VGS V  L  GDRV 
Sbjct: 2   EVEVEVKAAGLNFRDV-----LVALGLLPGDETPLGLECSGIVTRVGSGVTGLKVGDRVM 56

Query: 103 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 162
            +                                       G+ A  V   A L  K+PD
Sbjct: 57  GL-------------------------------------APGAFATHVRVDARLVVKIPD 79

Query: 163 NVSLEEGAMCEPLSVGVHAC-------RRANIGPETNVLIM-GAGPIGLVTMLAARAFGA 214
           ++S EE A     ++ V            A +    +VLI   AG +G   +  A+  GA
Sbjct: 80  SLSFEEAA-----TLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGA 134

Query: 215 PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK 274
                V  ++ R  + +  G  + +  S +L   A+ + +     G G+DV  +     +
Sbjct: 135 EVFATVGSEEKREFLRELGGPVDHIFSSRDL-SFADGILRATG--GRGVDVVLNSLS-GE 190

Query: 275 TMSTALGATCAGGKVCLVGMGHH--------EMTVPLTPAAVREVDVVGVF-----RYKN 321
            +  +       G+   V +G           M   L   +   VD+  +        + 
Sbjct: 191 LLRASWRCLAPFGR--FVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRE 248

Query: 322 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 368
                LELL +G +  KPL       +     +AF     G    KV
Sbjct: 249 LLREVLELLEAGVL--KPLPPTVVPSA--SEIDAFRLMQSGKHIGKV 291

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 75.7 bits (187), Expect = 3e-15
 Identities = 72/266 (27%), Positives = 102/266 (38%), Gaps = 67/266 (25%)

Query: 21  AWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVV 71
           A +L    G++ LK++   LP     +V VR++A G+  +D+      Y           
Sbjct: 2   AVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSA-------P 54

Query: 72  KEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLC 131
           K P V G ECAG +E VG  VK    GDRV  +                   + G Y   
Sbjct: 55  KPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGL------------------TRFGGY--- 93

Query: 132 PEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHA----CRRANI 187
                          A  V  PAD  F LPD +S EE A        + A        N+
Sbjct: 94  ---------------AEVVNVPADQVFPLPDGMSFEEAAAF--PVNYLTAYYALFELGNL 136

Query: 188 GPETNVLI-MGAGPIGLVTMLAARAFGAPRIVIV-DVDDYRLSVAKEIGADNIVKVSTNL 245
            P  +VL+   AG +GL      +    P + +V      +    KE G  +++   T  
Sbjct: 137 RPGQSVLVHSAAGGVGLAAGQLCKT--VPNVTVVGTASASKHEALKENGVTHVIDYRT-- 192

Query: 246 QDIAEEVEKIQKAMGTGIDVSFDCAG 271
           QD  EEV+KI      G+D+  D  G
Sbjct: 193 QDYVEEVKKIS---PEGVDIVLDALG 215

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 74.6 bits (184), Expect = 6e-15
 Identities = 84/376 (22%), Positives = 134/376 (35%), Gaps = 103/376 (27%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVVKEPM------VI 77
           L +    LP     +VL+R+ A G+   D+      Y             P       ++
Sbjct: 15  LVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKY-------------PPPPGASDIL 61

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
           G E AG +  VG  V     GDRV                  C    GG Y         
Sbjct: 62  GLEVAGEVVAVGEGVSRWKVGDRV------------------CALVAGGGY--------- 94

Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEP---LSVGVHACRRANIGPETNVL 194
                    A  V  PA     +P+ +SL E A   P    +V  +  +R  +     VL
Sbjct: 95  ---------AEYVAVPAGQVLPVPEGLSLVEAAAL-PETFFTVWSNLFQRGGLKAGETVL 144

Query: 195 IM-GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE 253
           I  GA  IG   +  A+AFGA        D+ + +  + +GAD  + ++   +D  E V+
Sbjct: 145 IHGGASGIGTTAIQLAKAFGARVFTTAGSDE-KCAACEALGAD--IAINYREEDFVEVVK 201

Query: 254 KIQKAMGTGIDVSFDCAG---LNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVR 309
              +  G G+DV  D  G   LN+ +     A    G++  +G  G  +  + L P   +
Sbjct: 202 --AETGGKGVDVILDIVGGSYLNRNIK----ALALDGRIVQIGFQGGRKAELDLGPLLAK 255

Query: 310 EVDVVGV----------------FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 353
            + + G                  R ++ WP    LL SG++  +P++   F        
Sbjct: 256 RLTITGSTLRARPVAEKAAIAAELR-EHVWP----LLASGRV--RPVIDKVFPLED--AA 306

Query: 354 EAFETSARGGTAIKVM 369
           +A      G    K++
Sbjct: 307 QAHALMESGDHIGKIV 322

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 69.6 bits (171), Expect = 2e-13
 Identities = 86/355 (24%), Positives = 127/355 (35%), Gaps = 63/355 (17%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP 74
           M AW+L        L ++  E+P  G  +VLV++ A G+   D   +     A      P
Sbjct: 1   MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW---SYP 57

Query: 75  MVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM 134
            V G + AGV+  VG++V     GDRV                    H    R       
Sbjct: 58  HVPGVDGAGVVVAVGAKVTGWKVGDRV------------------AYHASLAR------- 92

Query: 135 KFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGPETN 192
                    GS A   V  A     LPD++S EE A   C  L+      ++  I     
Sbjct: 93  --------GGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRT 144

Query: 193 VLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE 251
           +LI G  G +G   +  A+  G    VI           K +GAD    +  N +D+ E 
Sbjct: 145 ILITGGAGGVGSFAVQLAKRAGL--RVITTCSKRNFEYVKSLGAD--HVIDYNDEDVCER 200

Query: 252 VEKIQKAMGTGIDVSFDCAG--LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA-V 308
           +++I    G G+D   D  G      ++  L     G  VC+ G        P T A  V
Sbjct: 201 IKEITG--GRGVDAVLDTVGGETAAALAPTLAFN--GHLVCIQGRPDASPDPPFTRALSV 256

Query: 309 REVDVVGVFRY--KNTWP-------LCLELLRSGKIDVKPLVTHRFGFSQKEVEE 354
            EV +     +     W          LELL +GK++   +    F    + +  
Sbjct: 257 HEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEALRA 311

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 69.6 bits (171), Expect = 3e-13
 Identities = 86/385 (22%), Positives = 125/385 (32%), Gaps = 121/385 (31%)

Query: 41  PYDVLVRMKAVGICGSDV--------HYLKTLRCADFVVKE----PMVIGHECAGVIEKV 88
           P  VL+++ A  +   DV          L   R            P+ +G +C+GV+  +
Sbjct: 29  PNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDI 88

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSL 146
           GS VK+   GD V                                   +   P    G+ 
Sbjct: 89  GSGVKSFEIGDEV-----------------------------------WGAVPPWSQGTH 113

Query: 147 ANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHAC-------RRANIGPET----NVLI 195
           A  VV P +   K P N+S EE A     S+                + P+      VLI
Sbjct: 114 AEYVVVPENEVSKKPKNLSHEEAA-----SLPYAGLTAWSALVNVGGLNPKNAAGKRVLI 168

Query: 196 MGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK 254
           +G  G +G   +   +A+GA   V        + + K +GAD+++       D   E  +
Sbjct: 169 LGGSGGVGTFAIQLLKAWGA--HVTTTCSTDAIPLVKSLGADDVI-------DYNNEDFE 219

Query: 255 IQKAMGTGIDVSFDCAGLNK----------------TMSTALGATCAGGKVCLVGMGHHE 298
            +       DV  D  G +                  +S  L  T   G V   GM    
Sbjct: 220 EELTERGKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLV--GGM---- 273

Query: 299 MTVPLTPAAVREVDVVGVFRYKNT--W------PLCL----ELLRSGKIDVKPLVTHRFG 346
               L  A       V      +   W         L    +L+  GKI  KP++   F 
Sbjct: 274 ----LKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKI--KPVIDKVFP 327

Query: 347 FSQKEVEEAFE----TSARGGTAIK 367
           F   EV EA+E      ARG T IK
Sbjct: 328 FE--EVPEAYEKVESGHARGKTVIK 350

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 65.9 bits (162), Expect = 3e-12
 Identities = 49/177 (27%), Positives = 67/177 (37%), Gaps = 56/177 (31%)

Query: 46  VRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVP 105
           + ++A G+   DV  L  L     +     V+G ECAGV+ +VG  V  L  GDRV    
Sbjct: 1   IEVRAAGLNFRDV--LIALG----LYPGEAVLGGECAGVVTRVGPGVTGLAVGDRV---- 50

Query: 106 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVS 165
              + L                                G+ A +VV  A L   +PD  S
Sbjct: 51  ---MGL------------------------------APGAFATRVVTDARLVVPIPDGWS 77

Query: 166 LEEGAMCEPLSVGV------HA-CRRANIGPETNVLI-MGAGPIGLVTMLAARAFGA 214
            EE A     +V V      +A    A + P  +VLI   AG +G   +  AR  GA
Sbjct: 78  FEEAA-----TVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLARHLGA 129

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score = 66.1 bits (161), Expect = 5e-12
 Identities = 54/183 (29%), Positives = 82/183 (44%), Gaps = 16/183 (8%)

Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI-GHECAGVIEKVGSEVK 93
            +P  GP ++LVR++A G+C +D+H  +     D  V  P V  GHE  G +   G++  
Sbjct: 21  PVPRPGPGELLVRVRACGVCRTDLHVSE----GDLPVHRPRVTPGHEVVGEVAGRGADAG 76

Query: 94  TLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP 153
               GDRV  +   R       +C  C +C+ G  NLCP  ++       G  A     P
Sbjct: 77  GFAVGDRVG-IAWLRR------TCGVCRYCRRGAENLCPASRYTGW-DTDGGYAEYTTVP 128

Query: 154 ADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARA 211
           A   ++LP      E A  +C  + +G  A  RA++ P   + + G G    +T   A A
Sbjct: 129 AAFAYRLPTGYDDVELAPLLCAGI-IGYRALLRASLPPGGRLGLYGFGGSAHLTAQVALA 187

Query: 212 FGA 214
            GA
Sbjct: 188 QGA 190

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 64.9 bits (159), Expect = 9e-12
 Identities = 62/267 (23%), Positives = 101/267 (37%), Gaps = 58/267 (21%)

Query: 11  KEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV 70
           +E G+ +        V  L +   E+P  GP +VL++++A  I  SD+ +LK        
Sbjct: 7   EEYGKPLE-------VKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQ--YGST 57

Query: 71  VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNL 130
              P+  G E +G +   G             L+ G RVA               G Y  
Sbjct: 58  KALPVPPGFEGSGTVVAAGGGPLAQS------LI-GKRVA------------FLAGSY-- 96

Query: 131 CPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC--EPLSV--GVHACRRAN 186
                        G+ A   V  A  C  LPD VS E+GA     PL+    +   R   
Sbjct: 97  -------------GTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLETAREEG 143

Query: 187 IGPETNVLIMGAGPIGLVTMLA--ARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN 244
                  ++  A    L  ML    +A G   I IV   +  + + K+IGA+ +  ++++
Sbjct: 144 AK----AVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQ-VDLLKKIGAEYV--LNSS 196

Query: 245 LQDIAEEVEKIQKAMGTGIDVSFDCAG 271
             D  E+++++         + FD  G
Sbjct: 197 DPDFLEDLKELIAK--LNATIFFDAVG 221

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 1e-11
 Identities = 59/256 (23%), Positives = 97/256 (37%), Gaps = 57/256 (22%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVVKEPMVIGH 79
           GV+ LKI     P+    DVL+++ A G+  +D       Y      ++       ++G 
Sbjct: 12  GVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSE-------ILGL 64

Query: 80  ECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 139
           E AG +E VGS+VK    GDRV       +AL PG                         
Sbjct: 65  EVAGYVEDVGSDVKRFKEGDRV-------MALLPG------------------------- 92

Query: 140 PPVHGSLANQVVHPADLCFKLPDNVSLEE-GAMCEPLSVGVHACRR-ANIGPETNVLI-M 196
               G  A   V        +P   + EE  A+ E         ++  ++    +VLI  
Sbjct: 93  ----GGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHA 148

Query: 197 GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ 256
           GA  +G      A  +GA  I+    ++ ++   K++ A  ++       D      K++
Sbjct: 149 GASGVGTAAAQLAEKYGAATIITTSSEE-KVDFCKKLAAIILI----RYPDEEGFAPKVK 203

Query: 257 KAMG-TGIDVSFDCAG 271
           K  G  G+++  DC G
Sbjct: 204 KLTGEKGVNLVLDCVG 219

Length = 334

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 64.7 bits (157), Expect = 1e-11
 Identities = 68/276 (24%), Positives = 116/276 (42%), Gaps = 30/276 (10%)

Query: 40  GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99
           G  DV V++   G+C SD+H   T++      + P++ GHE  G+  KVG  V     GD
Sbjct: 30  GENDVTVKILFCGVCHSDLH---TIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGD 86

Query: 100 RVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQ------VVHP 153
           RV       V +  G SC  C+ C     N CP++ F           NQ      +V  
Sbjct: 87  RVG------VGVIIG-SCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVD 139

Query: 154 ADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPET--NVLIMGAGPIGLVTMLAA 209
                 +PD +  + GA  +C  ++V     +   +  E+   + + G G +G + +   
Sbjct: 140 HRFVLSIPDGLPSDSGAPLLCAGITV-YSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIG 198

Query: 210 RAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 269
           +AFG    VI    +        +GAD+ + V+T+ Q       K+++A+GT +D   D 
Sbjct: 199 KAFGLRVTVISRSSEKEREAIDRLGADSFL-VTTDSQ-------KMKEAVGT-MDFIIDT 249

Query: 270 AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP 305
                 +          GK+  +G+    + +P+ P
Sbjct: 250 VSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFP 285

Length = 375

>gnl|CDD|176199 cd08237, ribitol-5-phosphate_DH, ribitol-5-phosphate dehydrogenase

 Score = 64.3 bits (157), Expect = 2e-11
 Identities = 63/237 (26%), Positives = 98/237 (41%), Gaps = 40/237 (16%)

Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKE-PMVIGHECAGVIEKVGSEVKTLVPGDRV 101
            V+VR   + IC +D  Y +  R  + + K+ PM + HE  GV+  V     T   G +V
Sbjct: 27  WVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVV--VSDPTGTYKVGTKV 84

Query: 102 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP 161
            +VP   V  +  I             N  P  +F ++    G + + V  P D   KLP
Sbjct: 85  VMVPNTPVEKDEIIP-----------ENYLPSSRFRSSG-YDGFMQDYVFLPPDRLVKLP 132

Query: 162 DNVSLEEGAMCEPLSVGVHACRRAN---IGPETNVLIMGAGPIGLVTMLAAR-AFGAPRI 217
           DNV  E  A  E +SVGVHA  R           + + G G +G +T L  +  +   ++
Sbjct: 133 DNVDPEVAAFTELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKL 192

Query: 218 VIVDVDDYRL---SVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 271
           V+      +L   S A E         +  + DI E++          +D +F+C G
Sbjct: 193 VVFGKHQEKLDLFSFADE---------TYLIDDIPEDLA---------VDHAFECVG 231

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 341

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 63.7 bits (155), Expect = 3e-11
 Identities = 66/269 (24%), Positives = 113/269 (42%), Gaps = 29/269 (10%)

Query: 34  FELPSLGPYDVLVRMKAVGICGSDVHYLKT-LRCADFVVKEPMVIGHECAGVIEKVGSEV 92
           + L   GP DV++++   GIC +D+H +K  L  +++    PMV GHE  G + +VGS+V
Sbjct: 27  YTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNY----PMVPGHEVVGEVVEVGSDV 82

Query: 93  KTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT------PPVHGSL 146
                GD V       V +  G  C  C  CK      C +  +          P  G  
Sbjct: 83  SKFTVGDIVG------VGVIVG-CCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGF 135

Query: 147 ANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLV 204
           A+ +V       K+P+ ++ E+ A  +C  ++V                 I+G G +G +
Sbjct: 136 ASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHM 195

Query: 205 TMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 264
            +  A+A G    VI   D  R    + +GAD+ +        ++ +  ++Q+A    +D
Sbjct: 196 GVKIAKAMGHHVTVISSSDKKREEALEHLGADDYL--------VSSDAAEMQEA-ADSLD 246

Query: 265 VSFDCAGLNKTMSTALGATCAGGKVCLVG 293
              D   +   +   L      GK+ L+G
Sbjct: 247 YIIDTVPVFHPLEPYLSLLKLDGKLILMG 275

Length = 357

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 57.4 bits (139), Expect = 4e-09
 Identities = 55/217 (25%), Positives = 86/217 (39%), Gaps = 25/217 (11%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTL------RCADFVVKEPM-VIGHECAGVIEKVG 89
           P LGP +VLV + A G+  ++V                    EP  + G + +G++  VG
Sbjct: 38  PELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGIVWAVG 97

Query: 90  SEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQ 149
             VK    GD V         +   +         GG     P  + +     +GS A  
Sbjct: 98  EGVKNWKVGDEVV--------VHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQF 149

Query: 150 VVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRR------ANIGPETNVLIMGA-GPIG 202
            +  A      P ++S EE A    L VG  A R         + P  NVLI GA G +G
Sbjct: 150 ALVQATQLMPKPKHLSWEEAA-AYML-VGATAYRMLFGWNPNTVKPGDNVLIWGASGGLG 207

Query: 203 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 239
            + +  ARA GA  + +V   + +    + +GA+ ++
Sbjct: 208 SMAIQLARAAGANPVAVVS-SEEKAEYCRALGAEGVI 243

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 56.0 bits (136), Expect = 9e-09
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
           P  G  D+LVR++AV +   D    K       V  +P ++G + +GV+E VGSEV    
Sbjct: 26  PVPGGRDLLVRVEAVSVNPVDT---KVRAGGAPVPGQPKILGWDASGVVEAVGSEVTLFK 82

Query: 97  PGDRV 101
            GD V
Sbjct: 83  VGDEV 87

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 55.3 bits (134), Expect = 2e-08
 Identities = 68/270 (25%), Positives = 106/270 (39%), Gaps = 47/270 (17%)

Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
            LK++   +P   P  VL+R+KA G+  S++    T +     VK P V+G E  G +E 
Sbjct: 14  VLKLREIPIPEPKPGWVLIRVKAFGLNRSEIF---TRQGHSPSVKFPRVLGIEAVGEVE- 69

Query: 88  VGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 147
                    PG   T  PG RVA   G                   M         GS A
Sbjct: 70  -------EAPGG--TFTPGQRVATAMG------------------GMGR----TFDGSYA 98

Query: 148 NQVVHPADLCFKLPDNVSLEE-GAMCEPLSVGVHACRRA-NIGPETNVLIMGA-GPIGLV 204
              + P +  + +  ++S  E  A+ E       +  R+  + P   +LI G    +GL 
Sbjct: 99  EYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLA 158

Query: 205 TMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 264
            +  A+A G   +        R ++ KE+GAD +V    +   IAE++         G D
Sbjct: 159 ALKLAKALG-ATVTATTRSPERAALLKELGADEVV---IDDGAIAEQLRAA----PGGFD 210

Query: 265 VSFDCAGLNKTMSTALGATCAGGKVCLVGM 294
              +  G   T+  +L     GG VC+ G+
Sbjct: 211 KVLELVG-TATLKDSLRHLRPGGIVCMTGL 239

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 55.2 bits (133), Expect = 2e-08
 Identities = 58/223 (26%), Positives = 88/223 (39%), Gaps = 34/223 (15%)

Query: 36  LPSLGPYDVLVRMKAVGI--------CGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
           +P LGP +VLV + A G+         G  V     LR    +     +IG + +GV+ +
Sbjct: 32  VPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGKLDLPFHIIGSDASGVVWR 91

Query: 88  VGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCD----HCKGGRYNLCPEMKFFATPPVH 143
           VG  V     GD V              SC + D      + G   L  E + +      
Sbjct: 92  VGPGVTRWKVGDEVV------------ASCLQVDLTAPDGRDGDPMLSSEQRIWGYETNF 139

Query: 144 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRR------ANIGPETNVLIMG 197
           GS A   +         P +++ EE A C  L  G  A R+      A + P  NVLI G
Sbjct: 140 GSFAEFALVKDYQLMPKPKHLTWEEAA-CPGL-TGATAYRQLVGWNPAAVKPGDNVLIWG 197

Query: 198 A-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 239
           A G +G      ARA G   + +V   + +    + +GA+ ++
Sbjct: 198 AAGGLGSYATQLARAGGGNPVAVVSSPE-KAEYCRSLGAEAVI 239

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 54.3 bits (131), Expect = 3e-08
 Identities = 75/291 (25%), Positives = 104/291 (35%), Gaps = 57/291 (19%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKT-LRCA----DFVVKEPMVIGHECAGVIEKVGSE 91
           P  GP  V + + A G     VH++ T LR       F  + P V G E AGV++ VG  
Sbjct: 23  PVPGPGQVRIAVAAAG-----VHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPG 77

Query: 92  VKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 151
           V     G RV    G                  GG Y                  A   V
Sbjct: 78  VDPAWLGRRVVAHTGRA----------------GGGY------------------AELAV 103

Query: 152 HPADLCFKLPDNVSLEEGAMCEPLSVGVHAC---RRANIGPETNVLIMGA-GPIGLVTML 207
              D    +PD + LE       +  G  A      A + P   VL+  A G +G + + 
Sbjct: 104 ADVDSLHPVPDGLDLEAAVAV--VHDGRTALGLLDLATLTPGDVVLVTAAAGGLGSLLVQ 161

Query: 208 AARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 267
            A+A GA  +V       + ++ + +GAD  V V     D  ++V   +   G G+ V  
Sbjct: 162 LAKAAGA-TVVGAAGGPAKTALVRALGAD--VAVDYTRPDWPDQVR--EALGGGGVTVVL 216

Query: 268 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT-VPLTPAAVREVDVVGVF 317
           D  G       AL     GG+    G    E T +    A  R V VVG+ 
Sbjct: 217 DGVG-GAIGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLL 266

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 54.0 bits (130), Expect = 4e-08
 Identities = 56/235 (23%), Positives = 90/235 (38%), Gaps = 47/235 (20%)

Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           E+   GP +V ++++A  +   D+  ++ L     +   P   G E +GV+  VG  V  
Sbjct: 1   EVAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPT--MPPYPFTPGFEASGVVRAVGPHVTR 58

Query: 95  LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA 154
           L  GD V    G+ +                                  G  A  V  P 
Sbjct: 59  LAVGDEVIAGTGESM----------------------------------GGHATLVTVPE 84

Query: 155 DLCFKLPDNVSLEEGAMCEPLSVG---VHACRRANIGPETNVLIMGA-GPIGLVTMLAAR 210
           D   + P ++S EE   C    V    + A  RA +    ++LI  A G  GL+ +  AR
Sbjct: 85  DQVVRKPASLSFEEA--CALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLAR 142

Query: 211 AFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 265
             GA        DD +L   K++G  +++       D  EE+ ++    G G+DV
Sbjct: 143 LKGAEIYATASSDD-KLEYLKQLGVPHVINYVEE--DFEEEIMRLTG--GRGVDV 192

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 53.8 bits (130), Expect = 4e-08
 Identities = 83/373 (22%), Positives = 123/373 (32%), Gaps = 84/373 (22%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G   LK+   +LP     +V+V+++A G+  +DV   + L         P   G++  G 
Sbjct: 11  GPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYP--DQPPLPFTPGYDLVGR 68

Query: 85  IEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
           ++ +GS V     GDRV        AL                                G
Sbjct: 69  VDALGSGVTGFEVGDRVA-------ALTRV-----------------------------G 92

Query: 145 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHAC----RRANIGPETNVLIMGA-G 199
             A  +   A     +P+ V   E A+C  L   V A     R A +     VLI GA G
Sbjct: 93  GNAEYINLDAKYLVPVPEGVDAAE-AVCLVL-NYVTAYQMLHRAAKVLTGQRVLIHGASG 150

Query: 200 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 259
            +G   +  A   GA   V     +   +  +E+GA       T +    ++        
Sbjct: 151 GVGQALLELALLAGAE--VYGTASERNHAALRELGA-------TPIDYRTKDWLPAMLTP 201

Query: 260 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM-----GHHEMTVPLTPAAV------ 308
           G G+DV FD  G  ++   +  A   GG +   G              L           
Sbjct: 202 G-GVDVVFDGVGG-ESYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLK 259

Query: 309 -----REVDVVGVFRYKNTWP--------LCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 355
                R      V+R +   P          L+LL  GKI  +P +  R   S  EV EA
Sbjct: 260 LLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKI--RPKIAKRLPLS--EVAEA 315

Query: 356 FETSARGGTAIKV 368
                 G    K+
Sbjct: 316 HRLLESGKVVGKI 328

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 52.0 bits (125), Expect = 2e-07
 Identities = 68/252 (26%), Positives = 100/252 (39%), Gaps = 50/252 (19%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKT-LRCADFVVKE-PMVIGHECA 82
           G   L+   F        +V V  KA+GI     +Y+ T +R   +     P  +G E A
Sbjct: 12  GPEVLQAVEFTPADPAENEVQVENKAIGI-----NYIDTYIRSGLYPPPSLPSGLGTEAA 66

Query: 83  GVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 142
           GV+ KVGS VK +  GDRV      + AL              G Y+            V
Sbjct: 67  GVVSKVGSGVKHIKVGDRVVYA---QSAL--------------GAYS-----------SV 98

Query: 143 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRAN--IGP-ETNVLIMGAG 199
           H   A++          LPD +S E+ A      + V+   R    I P E  +    AG
Sbjct: 99  HNVPADKAA-------ILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAG 151

Query: 200 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 259
            +GL+    A+A GA  I  V     +   AK+ GA  ++      ++I E V++I    
Sbjct: 152 GVGLIACQWAKALGAKLIGTVGSAQ-KAQRAKKAGAWQVINYRE--ENIVERVKEITG-- 206

Query: 260 GTGIDVSFDCAG 271
           G  + V +D  G
Sbjct: 207 GKKVRVVYDSVG 218

Length = 327

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 51.1 bits (123), Expect = 3e-07
 Identities = 89/371 (23%), Positives = 141/371 (38%), Gaps = 76/371 (20%)

Query: 29  LKIQPFELPSLGPYD-VLVRMKAVGICGSDVH-----YLKTLRCADFVVKEPMVIGHECA 82
           L+++ +E+P  GP + VLV+M A  I  +D++     Y           + P V G+E  
Sbjct: 16  LQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIK---PPTTPEPPAVGGNEGV 72

Query: 83  GVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 142
           G + KVGS VK+L PGD V                                       P 
Sbjct: 73  GEVVKVGSGVKSLKPGDWV-----------------------------------IPLRPG 97

Query: 143 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRR-----ANIGPETNVLIMG 197
            G+     V PAD   K+P++V  E+ A    LSV      R       + P   V+  G
Sbjct: 98  LGTWRTHAVVPADDLIKVPNDVDPEQAAT---LSVNPCTAYRLLEDFVKLQPGDWVIQNG 154

Query: 198 A-GPIGLVTMLAARAFGAPRI-VIVDVDDYRLSVA--KEIGADNIVKVSTNLQDIAEEVE 253
           A   +G   +  A+  G   I V+ D  D        K +GAD+++        +A E+ 
Sbjct: 155 ANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELL 214

Query: 254 KIQKAMGTGIDVSFDCAGLNKT--MSTALGATCAGGK-VCLVGMGHHEMTVPLTPAAVRE 310
           K   A G    ++ +C G      ++  L     GG  V   GM    +TVP +    ++
Sbjct: 215 K--SAPGGRPKLALNCVGGKSATELARLLS---PGGTMVTYGGMSGQPVTVPTSLLIFKD 269

Query: 311 VDVVGVFRYKNT-------WPLCL----ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS 359
           + + G +  +             L    EL+R GK+   P V        +E ++A   +
Sbjct: 270 ITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKL-KAPPVEKVTDDPLEEFKDALANA 328

Query: 360 ARGGTAIKVMF 370
            +GG   K + 
Sbjct: 329 LKGGGGGKQVL 339

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 50.4 bits (121), Expect = 5e-07
 Identities = 81/298 (27%), Positives = 106/298 (35%), Gaps = 55/298 (18%)

Query: 26  VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE-PMVIGHECAGV 84
            + L+I     P+ G  +VLVR     I   D   L T+R       E P + G E  GV
Sbjct: 13  ADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHD---LWTIRGTYGYKPELPAIGGSEAVGV 69

Query: 85  IEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
           ++ VG  VK L  G RV                                       PVHG
Sbjct: 70  VDAVGEGVKGLQVGQRVA---------------------------------VA---PVHG 93

Query: 145 SLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGP-ETNVLIMGAGPI 201
           + A   V PAD    LPD +S E  A     PLS  +       + P +  +     G +
Sbjct: 94  TWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLS-ALMLLDFLGVKPGQWLIQNAAGGAV 152

Query: 202 G-LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV-STNLQDIAEEVEKIQKAM 259
           G LV MLAA A G   I +V  D        E+ A  I  V ST      ++V +   A 
Sbjct: 153 GKLVAMLAA-ARGINVINLVRRDA----GVAELRALGIGPVVSTEQPGWQDKVREA--AG 205

Query: 260 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGV 316
           G  I V+ D  G  K     L     GG +   G M    M +       ++  V G 
Sbjct: 206 GAPISVALDSVG-GKLAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGF 262

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|130269 TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

 Score = 48.7 bits (116), Expect = 2e-06
 Identities = 74/348 (21%), Positives = 123/348 (35%), Gaps = 69/348 (19%)

Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGI-CGSDVHYLKTLRCADFVVKEPMVIGHEC 81
           L G N ++++   L    P D++V +   GI  G++  +   L      +  P+V G+E 
Sbjct: 7   LSGPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYES 66

Query: 82  AGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP 141
            G + + G +     PGDRV  VPG                C      L           
Sbjct: 67  VGRVVEAGPDTGFR-PGDRV-FVPGSN--------------CYEDVRGL----------- 99

Query: 142 VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNV---LIMGA 198
             G  + ++V PA    +L   +    G     L++   A R A  G E  V   LI+G 
Sbjct: 100 -FGGASKRLVTPASRVCRLDPAL----GPQGALLALAATA-RHAVAGAEVKVLPDLIVGH 153

Query: 199 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI--Q 256
           G +G +     +A G     + + +  R                    D A   E +  +
Sbjct: 154 GTLGRLLARLTKAAGGSPPAVWETNPRRR-------------------DGATGYEVLDPE 194

Query: 257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 316
           K         +D +G    + T +     GG++ L G     +     PA ++E      
Sbjct: 195 KDPRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEAR---- 250

Query: 317 FRYKNTWP-----LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS 359
            R    W         EL+ SG + +  L+TH+      +  EA+ T+
Sbjct: 251 LRIAAEWQPGDLHAVRELIESGALSLDGLITHQ--RPASDAAEAYMTA 296

[Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 308

>gnl|CDD|222256 pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenase

 Score = 44.3 bits (105), Expect = 9e-06
 Identities = 33/139 (23%), Positives = 49/139 (35%), Gaps = 15/139 (10%)

Query: 233 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV 292
           +GAD ++  +T  +D  E         G G+DV  D  G    +   L     G  V + 
Sbjct: 1   LGADEVIDYTT--EDFEEATA------GEGVDVVLDTVGGETLLRALLALKPGGRLVSIG 52

Query: 293 GMGHHEMTVPL-TPAAVREVDVVGVFRYKNTWPL--CLELLRSGKIDVKPLVTHRFGFSQ 349
           G               VR V +  V   +    L    EL+ +GK+  +P++   F    
Sbjct: 53  GPDLLLSVAAKAGGRGVRGVFLFPVSPGEAGADLAELAELVEAGKL--RPVIDRVFPLE- 109

Query: 350 KEVEEAFETSARGGTAIKV 368
            E  EA      G    KV
Sbjct: 110 -EAAEAHRYLESGRARGKV 127

Length = 129

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 43.8 bits (104), Expect = 8e-05
 Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 8/75 (10%)

Query: 30  KIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA---DFVVKEPMVIGHECAGVIE 86
            I    +P  GP +VLV+ + VGI  SD+++      A   D  VK P   G E  G + 
Sbjct: 19  SIVDVPVPLPGPGEVLVKNRFVGINASDINF-----TAGRYDPGVKPPFDCGFEGVGEVV 73

Query: 87  KVGSEVKTLVPGDRV 101
            VG  V     GD V
Sbjct: 74  AVGEGVTDFKVGDAV 88

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 64/263 (24%), Positives = 104/263 (39%), Gaps = 61/263 (23%)

Query: 29  LKIQPFELP---SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVK-EPMVIGHECAGV 84
           L I   +LP        +++V++ A  +   D   LK      F  K +   +G + +GV
Sbjct: 13  LTITTIKLPLPNCYKDNEIVVKVHAAALNPVD---LKLYNSYTFHFKVKEKGLGRDYSGV 69

Query: 85  IEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
           I KVGS V +     +V    GD V    GI      H  GG+                G
Sbjct: 70  IVKVGSNVASEW---KV----GDEVC---GIY----PHPYGGQ----------------G 99

Query: 145 SLANQ-VVHPADLCFKL---PDNVSLEEGAMCEPLSVG-----VHACRRANIGPETNVLI 195
           +L+   +V P      +   P+N+SLEE A   PL +G     +    +  +GP++ VL+
Sbjct: 100 TLSQYLLVDPKKDKKSITRKPENISLEEAA-AWPLVLGTAYQILEDLGQ-KLGPDSKVLV 157

Query: 196 MGAG-PIGL-VTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV-----KVSTNLQDI 248
           +G    +G     LA   +    +V          + K++GAD+ +          L+ +
Sbjct: 158 LGGSTSVGRFAIQLAKNHYNIGTVVGT-CSSRSAELNKKLGADHFIDYDAHSGVKLLKPV 216

Query: 249 AEEVEKIQKAMGTGIDVSFDCAG 271
            E V+   K      D+  DC G
Sbjct: 217 LENVKGQGK-----FDLILDCVG 234

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 57/276 (20%), Positives = 96/276 (34%), Gaps = 45/276 (16%)

Query: 37  PSLGPYDVLVRMKAVGI-----------CGSDVHYLKTLRCADFV------VKEPMVIGH 79
           P+  P +VL+R+ A G+             ++V        A         +  P + G 
Sbjct: 24  PTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQGA 83

Query: 80  ECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 139
           +  G +  VG      V   R+    G+RV ++P I             +   ++ +  +
Sbjct: 84  DIVGRVVAVGEG----VDTARI----GERVLVDPSIR-------DPPEDDPA-DIDYIGS 127

Query: 140 PPVHGSLANQVVHPADLCFKLPDNVSLEE-GAMCEPLSVGVHACRRANIGPETNVLIMGA 198
               G  A   V PA+  + +   +S  E        S   +   RA +G    VL+ GA
Sbjct: 128 -ERDGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENMLERAGVGAGETVLVTGA 186

Query: 199 -GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 257
            G +G   +  A+  GA  IVI      +    + +GAD ++     L      +   + 
Sbjct: 187 SGGVGSALVQLAKRRGA--IVIAVAGAAKEEAVRALGADTVILRDAPL------LADAKA 238

Query: 258 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG 293
             G  +DV  D  G        L     GG+    G
Sbjct: 239 LGGEPVDVVADVVG-GPLFPDLLRLLRPGGRYVTAG 273

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score = 40.5 bits (95), Expect = 0.001
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
           P  G  D+LV +KA+ +   D    K          +P ++G + AGV+  VG EV    
Sbjct: 25  PKPGGRDLLVEVKAISVNPVDT---KVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLFK 81

Query: 97  PGDRV 101
           PGD V
Sbjct: 82  PGDEV 86

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|225136 COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 7/68 (10%)

Query: 171 MCEPLSVGVH------ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD 224
           M + +S G+H            I P   VL +  G  G + +L A++ G   +V +D+ +
Sbjct: 27  MNDLMSFGLHRLWRRALISLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISE 85

Query: 225 YRLSVAKE 232
             L VA+E
Sbjct: 86  SMLEVARE 93

Length = 238

>gnl|CDD|102354 PRK06392, PRK06392, homoserine dehydrogenase; Provisional

 Score = 38.7 bits (90), Expect = 0.003
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 9/87 (10%)

Query: 192 NVLIMGAGPIGLVTMLAARAFGAPR-----IVIVDVDDYRLSVAKEIGAD--NIV--KVS 242
            + I+G G +GL  +   ++    R     I +V V D +LS   E G D   I+  K  
Sbjct: 2   RISIIGLGNVGLNVLRIIKSRNDDRRNNNGISVVSVSDSKLSYYNERGLDIGKIISYKEK 61

Query: 243 TNLQDIAEEVEKIQKAMGTGIDVSFDC 269
             L++I  E  K  +      DV  D 
Sbjct: 62  GRLEEIDYEKIKFDEIFEIKPDVIVDV 88

Length = 326

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	372
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.98
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.98
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.98
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.97
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.97
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.97
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.96
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.96
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.96
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.94
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.93
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.88
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.68
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.39
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.35
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.25
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.46
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.38
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.28
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.24
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.21
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.12
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	97.99
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	97.98
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.87
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.84
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.81
PLN02494	477	adenosylhomocysteinase	97.77
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.67
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.62
PRK08324	681	short chain dehydrogenase; Validated	97.61
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.59
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.54
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.43
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.4
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.39
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.35
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.27
PRK05993	277	short chain dehydrogenase; Provisional	97.21
PRK12742	237	oxidoreductase; Provisional	97.11
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	97.05
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	97.05
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	96.96
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	96.92
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	96.89
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.88
PRK14967	223	putative methyltransferase; Provisional	96.84
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	96.84
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.83
PRK05693	274	short chain dehydrogenase; Provisional	96.82
PRK08017	256	oxidoreductase; Provisional	96.82
PRK06182	273	short chain dehydrogenase; Validated	96.81
TIGR00438	188	rrmJ cell division protein FtsJ.	96.8
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.77
PRK06139	330	short chain dehydrogenase; Provisional	96.75
PRK06057	255	short chain dehydrogenase; Provisional	96.74
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.69
PRK06949	258	short chain dehydrogenase; Provisional	96.69
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.69
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	96.65
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.65
PRK07060	245	short chain dehydrogenase; Provisional	96.62
PRK08265	261	short chain dehydrogenase; Provisional	96.62
PRK12939	250	short chain dehydrogenase; Provisional	96.61
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.6
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.57
PRK07814	263	short chain dehydrogenase; Provisional	96.56
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	96.56
PLN03209	576	translocon at the inner envelope of chloroplast su	96.51
PRK07109	334	short chain dehydrogenase; Provisional	96.51
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.5
PRK05866	293	short chain dehydrogenase; Provisional	96.48
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.47
PRK07825	273	short chain dehydrogenase; Provisional	96.47
PRK08177	225	short chain dehydrogenase; Provisional	96.43
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	96.43
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.41
PRK00811	283	spermidine synthase; Provisional	96.39
PRK07806	248	short chain dehydrogenase; Provisional	96.39
PRK00536	262	speE spermidine synthase; Provisional	96.38
PRK07677	252	short chain dehydrogenase; Provisional	96.38
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.33
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	96.31
COG0421	282	SpeE Spermidine synthase [Amino acid transport and	96.31
PRK06841	255	short chain dehydrogenase; Provisional	96.31
PRK06196	315	oxidoreductase; Provisional	96.3
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.3
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.3
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.29
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	96.29
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	96.29
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	96.28
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.26
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.24
PRK06180	277	short chain dehydrogenase; Provisional	96.24
PRK05867	253	short chain dehydrogenase; Provisional	96.24
PRK08618	325	ornithine cyclodeaminase; Validated	96.23
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.23
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.22
PRK06484	520	short chain dehydrogenase; Validated	96.22
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.22
PRK12828	239	short chain dehydrogenase; Provisional	96.21
PRK05872	296	short chain dehydrogenase; Provisional	96.21
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.2
PRK07062	265	short chain dehydrogenase; Provisional	96.2
PRK12829	264	short chain dehydrogenase; Provisional	96.19
PRK07831	262	short chain dehydrogenase; Provisional	96.18
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.16
PRK08589	272	short chain dehydrogenase; Validated	96.16
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	96.15
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.14
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	96.14
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.13
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.13
PRK12937	245	short chain dehydrogenase; Provisional	96.11
PRK09072	263	short chain dehydrogenase; Provisional	96.09
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.07
PRK06128	300	oxidoreductase; Provisional	96.06
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.05
CHL00194	317	ycf39 Ycf39; Provisional	96.04
PRK06500	249	short chain dehydrogenase; Provisional	96.04
PRK06198	260	short chain dehydrogenase; Provisional	96.03
PRK08862	227	short chain dehydrogenase; Provisional	96.03
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.02
PRK07478	254	short chain dehydrogenase; Provisional	96.02
PRK08643	256	acetoin reductase; Validated	95.99
PRK04457	262	spermidine synthase; Provisional	95.99
PRK08340	259	glucose-1-dehydrogenase; Provisional	95.98
PLN02823	336	spermine synthase	95.96
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	95.96
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	95.96
PRK07402	196	precorrin-6B methylase; Provisional	95.96
PRK07453	322	protochlorophyllide oxidoreductase; Validated	95.95
PRK07774	250	short chain dehydrogenase; Provisional	95.95
PRK05717	255	oxidoreductase; Validated	95.95
PRK06172	253	short chain dehydrogenase; Provisional	95.95
PRK07523	255	gluconate 5-dehydrogenase; Provisional	95.94
PRK07454	241	short chain dehydrogenase; Provisional	95.94
PRK07326	237	short chain dehydrogenase; Provisional	95.92
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	95.92
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	95.91
PRK08339	263	short chain dehydrogenase; Provisional	95.91
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.9
PRK08628	258	short chain dehydrogenase; Provisional	95.9
PRK01581	374	speE spermidine synthase; Validated	95.9
PRK07890	258	short chain dehydrogenase; Provisional	95.89
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	95.89
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.88
PRK07035	252	short chain dehydrogenase; Provisional	95.88
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	95.87
PRK08213	259	gluconate 5-dehydrogenase; Provisional	95.87
PRK05854	313	short chain dehydrogenase; Provisional	95.86
PRK08226	263	short chain dehydrogenase; Provisional	95.86
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	95.86
PRK06483	236	dihydromonapterin reductase; Provisional	95.85
PRK07576	264	short chain dehydrogenase; Provisional	95.83
PRK06194	287	hypothetical protein; Provisional	95.83
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.83
PRK05875	276	short chain dehydrogenase; Provisional	95.83
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	95.82
PRK08317	241	hypothetical protein; Provisional	95.82
PRK12743	256	oxidoreductase; Provisional	95.8
PRK08267	260	short chain dehydrogenase; Provisional	95.8
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.8
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	95.78
PRK08277	278	D-mannonate oxidoreductase; Provisional	95.77
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.77
PLN02366	308	spermidine synthase	95.77
PRK07904	253	short chain dehydrogenase; Provisional	95.75
PRK07063	260	short chain dehydrogenase; Provisional	95.74
PRK08703	239	short chain dehydrogenase; Provisional	95.73
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.72
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	95.72
KOG1252	362	consensus Cystathionine beta-synthase and related	95.71
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	95.71
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.71
PRK06138	252	short chain dehydrogenase; Provisional	95.71
PRK04148	134	hypothetical protein; Provisional	95.7
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.7
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	95.7
PRK07024	257	short chain dehydrogenase; Provisional	95.69
PRK08085	254	gluconate 5-dehydrogenase; Provisional	95.69
PLN02780	320	ketoreductase/ oxidoreductase	95.67
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.66
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	95.66
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	95.65
PRK07067	257	sorbitol dehydrogenase; Provisional	95.63
PRK06914	280	short chain dehydrogenase; Provisional	95.63
PRK09242	257	tropinone reductase; Provisional	95.62
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	95.57
PRK07985	294	oxidoreductase; Provisional	95.56
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.56
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.54
PRK08264	238	short chain dehydrogenase; Validated	95.53
PRK07856	252	short chain dehydrogenase; Provisional	95.52
PLN02253	280	xanthoxin dehydrogenase	95.52
PRK06701	290	short chain dehydrogenase; Provisional	95.51
PRK07832	272	short chain dehydrogenase; Provisional	95.5
PRK06953	222	short chain dehydrogenase; Provisional	95.5
PRK08251	248	short chain dehydrogenase; Provisional	95.5
PRK05876	275	short chain dehydrogenase; Provisional	95.5
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	95.49
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.49
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.47
PRK12746	254	short chain dehydrogenase; Provisional	95.47
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	95.47
PRK05562	223	precorrin-2 dehydrogenase; Provisional	95.46
PRK06181	263	short chain dehydrogenase; Provisional	95.43
PRK06197	306	short chain dehydrogenase; Provisional	95.42
PRK06114	254	short chain dehydrogenase; Provisional	95.4
PRK08263	275	short chain dehydrogenase; Provisional	95.39
COG4122	219	Predicted O-methyltransferase [General function pr	95.39
PRK06398	258	aldose dehydrogenase; Validated	95.39
PRK09186	256	flagellin modification protein A; Provisional	95.39
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.39
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.38
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	95.38
PRK07340	304	ornithine cyclodeaminase; Validated	95.38
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	95.37
PRK06482	276	short chain dehydrogenase; Provisional	95.36
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	95.36
PRK06720	169	hypothetical protein; Provisional	95.35
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	95.34
PRK06124	256	gluconate 5-dehydrogenase; Provisional	95.32
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.3
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	95.3
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	95.28
PRK07074	257	short chain dehydrogenase; Provisional	95.28
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	95.27
PRK12747	252	short chain dehydrogenase; Provisional	95.26
PRK06179	270	short chain dehydrogenase; Provisional	95.24
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	95.23
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.22
PRK09134	258	short chain dehydrogenase; Provisional	95.21
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.17
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.16
PRK07791	286	short chain dehydrogenase; Provisional	95.15
PRK06125	259	short chain dehydrogenase; Provisional	95.15
PRK07775	274	short chain dehydrogenase; Provisional	95.14
PRK12548	289	shikimate 5-dehydrogenase; Provisional	95.14
PRK06523	260	short chain dehydrogenase; Provisional	95.13
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	95.12
PLN03139	386	formate dehydrogenase; Provisional	95.11
PRK09291	257	short chain dehydrogenase; Provisional	95.11
PRK08936	261	glucose-1-dehydrogenase; Provisional	95.09
PRK12367	245	short chain dehydrogenase; Provisional	95.07
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.06
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	95.06
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	95.06
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.06
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	95.05
PRK10538	248	malonic semialdehyde reductase; Provisional	95.02
PRK05884	223	short chain dehydrogenase; Provisional	95.02
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	95.01
PLN03075	296	nicotianamine synthase; Provisional	95.01
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	95.0
PRK05650	270	short chain dehydrogenase; Provisional	95.0
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	94.99
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.98
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	94.96
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	94.95
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	94.95
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.94
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	94.94
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	94.9
PRK08328	231	hypothetical protein; Provisional	94.9
PRK08303	305	short chain dehydrogenase; Provisional	94.88
PRK06947	248	glucose-1-dehydrogenase; Provisional	94.88
PRK09135	249	pteridine reductase; Provisional	94.86
KOG3201	201	consensus Uncharacterized conserved protein [Funct	94.86
PRK07097	265	gluconate 5-dehydrogenase; Provisional	94.84
KOG0725	270	consensus Reductases with broad range of substrate	94.84
TIGR03215	285	ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati	94.82
PRK04266	226	fibrillarin; Provisional	94.8
PRK12935	247	acetoacetyl-CoA reductase; Provisional	94.76
PLN02233	261	ubiquinone biosynthesis methyltransferase	94.75
PRK12744	257	short chain dehydrogenase; Provisional	94.73
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	94.72
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.72
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	94.67
PRK06484	520	short chain dehydrogenase; Validated	94.67
PRK07574	385	formate dehydrogenase; Provisional	94.64
PLN02244	340	tocopherol O-methyltransferase	94.64
PRK08300	302	acetaldehyde dehydrogenase; Validated	94.64
PRK07577	234	short chain dehydrogenase; Provisional	94.63
PRK11207	197	tellurite resistance protein TehB; Provisional	94.61
PRK15116	268	sulfur acceptor protein CsdL; Provisional	94.6
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	94.59
PRK12938	246	acetyacetyl-CoA reductase; Provisional	94.57
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	94.57
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	94.56
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	94.55
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	94.53
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	94.5
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	94.49
PRK05855	582	short chain dehydrogenase; Validated	94.47
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	94.47
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	94.46
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	94.44
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	94.43
PF01564	246	Spermine_synth: Spermine/spermidine synthase; Inte	94.42
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	94.41
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.41
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	94.41
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	94.41
PRK10258	251	biotin biosynthesis protein BioC; Provisional	94.41
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	94.4
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	94.39
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	94.39
PRK06123	248	short chain dehydrogenase; Provisional	94.35
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	94.34
COG2910	211	Putative NADH-flavin reductase [General function p	94.33
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	94.33
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	94.31
PRK06101	240	short chain dehydrogenase; Provisional	94.3
PF01209	233	Ubie_methyltran: ubiE/COQ5 methyltransferase famil	94.29
PRK08278	273	short chain dehydrogenase; Provisional	94.26
TIGR02415	254	23BDH acetoin reductases. One member of this famil	94.25
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	94.21
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	94.19
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.18
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	94.14
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	94.1
PRK03612	521	spermidine synthase; Provisional	94.1
PRK06141	314	ornithine cyclodeaminase; Validated	94.09
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	94.07
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	94.07
PRK12827	249	short chain dehydrogenase; Provisional	94.06
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	94.04
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	93.98
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	93.92
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	93.91
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	93.88
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	93.79
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	93.79
PLN00203	519	glutamyl-tRNA reductase	93.79
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	93.78
PRK07069	251	short chain dehydrogenase; Validated	93.74
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	93.74
PRK06940	275	short chain dehydrogenase; Provisional	93.71
PRK00216	239	ubiE ubiquinone/menaquinone biosynthesis methyltra	93.7
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	93.68
COG0673	342	MviM Predicted dehydrogenases and related proteins	93.65
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	93.65
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	93.64
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	93.64
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	93.63
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	93.62
PRK12824	245	acetoacetyl-CoA reductase; Provisional	93.62
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	93.61
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	93.61
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	93.61
PRK07102	243	short chain dehydrogenase; Provisional	93.58
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	93.57
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	93.54
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	93.52
PRK13243	333	glyoxylate reductase; Reviewed	93.44
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	93.43
PLN02476	278	O-methyltransferase	93.43
PRK10669	558	putative cation:proton antiport protein; Provision	93.43
PRK08291	330	ectoine utilization protein EutC; Validated	93.4
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	93.35
PF08241	95	Methyltransf_11: Methyltransferase domain; InterPr	93.35
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	93.34
PRK05599	246	hypothetical protein; Provisional	93.28
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	93.27
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	93.23
PRK03562	621	glutathione-regulated potassium-efflux system prot	93.21
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.21
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	93.2
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.19
PRK07201	657	short chain dehydrogenase; Provisional	93.16
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	93.13
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	93.07
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	93.06
PLN03013	429	cysteine synthase	93.06
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	93.05
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	93.02
PRK11761	296	cysM cysteine synthase B; Provisional	93.02
PRK13255	218	thiopurine S-methyltransferase; Reviewed	93.01
PRK04207	341	glyceraldehyde-3-phosphate dehydrogenase; Provisio	93.0
PRK06153	393	hypothetical protein; Provisional	92.99
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	92.98
KOG1208	314	consensus Dehydrogenases with different specificit	92.97
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	92.96

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.2e-60  Score=412.41  Aligned_cols=345  Identities=53%  Similarity=0.908  Sum_probs=316.5

Q ss_pred             hhcceeEEEecCCceeEEEecCCCC-CCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCc
Q 017426           15 EEVNMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (372)
Q Consensus        15 ~~~~~~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (372)
                      ..+|+++++.++..+++.+.|.|++ +|+||+|++.++|||++|++.+...+.+.+..+.|.++|||.+|+|.++|+.|+
T Consensus         2 ~~~~~A~vl~g~~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk   81 (354)
T KOG0024|consen    2 AADNLALVLRGKGDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK   81 (354)
T ss_pred             CcccceeEEEccCceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence            3568999999999999999999987 999999999999999999999998777777778999999999999999999999


Q ss_pred             cccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc
Q 017426           94 TLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE  173 (372)
Q Consensus        94 ~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~  173 (372)
                      ++++        ||||++.+..+|+.|.+|..+++|+|+++.+.+.+..+|++++|++.+++.|+++||+++++++|++.
T Consensus        82 ~LkV--------GDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~e  153 (354)
T KOG0024|consen   82 HLKV--------GDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIE  153 (354)
T ss_pred             cccc--------CCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhccccc
Confidence            9999        99999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHH
Q 017426          174 PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE  253 (372)
Q Consensus       174 ~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~  253 (372)
                      |++++|++++++++++|++|||+|||++|+.+...|+++|+..|++++..+.|.++++++|++.+....... + .+.++
T Consensus       154 PLsV~~HAcr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~-~-~~~~~  231 (354)
T KOG0024|consen  154 PLSVGVHACRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKS-S-PQELA  231 (354)
T ss_pred             chhhhhhhhhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccc-c-HHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999999876643322 2 22233


Q ss_pred             HHHHH--cCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccCCC-cHHHHHHHH
Q 017426          254 KIQKA--MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN-TWPLCLELL  330 (372)
Q Consensus       254 ~~~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~ll  330 (372)
                      +..+.  +...+|+.|||+|.....+.++..++.+|+++.+++......++......|++++.|++.+.+ .+..+++++
T Consensus       232 ~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li  311 (354)
T KOG0024|consen  232 ELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELV  311 (354)
T ss_pred             HHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHH
Confidence            33221  224599999999999899999999999999999999999899999999999999999999955 999999999


Q ss_pred             HcCCCCCCCceEEEecCChHHHHHHHHHHhcCCC-ceEEEEe
Q 017426          331 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMFN  371 (372)
Q Consensus       331 ~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~-~gkvvv~  371 (372)
                      ++|++..++++++.|++  +++.+||+.+..+.. ..|+++.
T Consensus       312 ~sGki~~k~lIT~r~~~--~~~~eAf~~~~~~~~~~iKv~i~  351 (354)
T KOG0024|consen  312 SSGKIDVKPLITHRYKF--DDADEAFETLQHGEEGVIKVIIT  351 (354)
T ss_pred             HcCCcCchhheeccccc--chHHHHHHHHHhCcCCceEEEEe
Confidence            99999999999999999  999999999887753 5688775

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=1.4e-59  Score=420.59  Aligned_cols=330  Identities=31%  Similarity=0.492  Sum_probs=296.8

Q ss_pred             hcceeEEEecCC-ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           16 EVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        16 ~~~~~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      .+|||+++...+ ++++.+++.|.|+|+||+|+|+|+|+|++|++.++|....   ..+|+++|||.+|+|+++|++|++
T Consensus         2 ~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~---~~~P~ipGHEivG~V~~vG~~V~~   78 (339)
T COG1064           2 MTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPV---PKLPLIPGHEIVGTVVEVGEGVTG   78 (339)
T ss_pred             cceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCC---CCCCccCCcceEEEEEEecCCCcc
Confidence            578999998654 4999999999999999999999999999999999986543   458999999999999999999999


Q ss_pred             ccccccccCCCCCEEEE-cCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc
Q 017426           95 LVPGDRVTLVPGDRVAL-EPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE  173 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~  173 (372)
                      |++        ||||.+ ....+|+.|.||..++.++|++..++++ +.+|+|+||+++|+++++++|+++++++||.+.
T Consensus        79 ~k~--------GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy-~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApll  149 (339)
T COG1064          79 LKV--------GDRVGVGWLVISCGECEYCRSGNENLCPNQKITGY-TTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLL  149 (339)
T ss_pred             CCC--------CCEEEecCccCCCCCCccccCcccccCCCccccce-eecCcceeEEEEchHHeEECCCCCChhhhhhhh
Confidence            999        999988 8999999999999999999999888887 499999999999999999999999999999887


Q ss_pred             hh-HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHH
Q 017426          174 PL-SVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV  252 (372)
Q Consensus       174 ~~-~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~  252 (372)
                      +. .|+|++++.++++||++|+|.|+|++|++++|+|+++|+ .|+++++++++.+++++||++.+++..  +.++.+.+
T Consensus       150 CaGiT~y~alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~--~~~~~~~~  226 (339)
T COG1064         150 CAGITTYRALKKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSS--DSDALEAV  226 (339)
T ss_pred             cCeeeEeeehhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcC--CchhhHHh
Confidence            54 589999999999999999999999999999999999997 699999999999999999999998743  34554444


Q ss_pred             HHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCC-C-CccccchhhhccCcEEEeeccC-CCcHHHHHHH
Q 017426          253 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-H-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLEL  329 (372)
Q Consensus       253 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~l  329 (372)
                      ++       .+|++||+++ +..++.+++.|+++|+++.+|... . ...++...+..+++++.|+... ..++++++++
T Consensus       227 ~~-------~~d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f  298 (339)
T COG1064         227 KE-------IADAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDF  298 (339)
T ss_pred             Hh-------hCcEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHH
Confidence            32       3999999999 889999999999999999999774 3 3456777889999999999877 7789999999


Q ss_pred             HHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          330 LRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       330 l~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ..+|++  .+.+.+.+++  +++++|++.+.+++..++.|+++
T Consensus       299 ~~~g~I--kp~i~e~~~l--~~in~A~~~m~~g~v~gR~Vi~~  337 (339)
T COG1064         299 AAEGKI--KPEILETIPL--DEINEAYERMEKGKVRGRAVIDM  337 (339)
T ss_pred             HHhCCc--eeeEEeeECH--HHHHHHHHHHHcCCeeeEEEecC
Confidence            999999  5656567888  99999999999999999999874

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4e-52  Score=388.53  Aligned_cols=338  Identities=30%  Similarity=0.537  Sum_probs=291.2

Q ss_pred             hhcceeEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           15 EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        15 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      ...+|+++++++..+++.+.|.| ++++||+|||.++|+|++|++.+.+...+.....+|.++|||++|+|+++  ++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~   78 (343)
T PRK09880          2 QVKTQSCVVAGKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG   78 (343)
T ss_pred             cccceEEEEecCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence            45689999999999999999987 68999999999999999999987532212222457999999999999999  7889


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC----CCCCcceeEEEecCCceEECCCCCCccccc
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP----PVHGSLANQVVHPADLCFKLPDNVSLEEGA  170 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa  170 (372)
                      |++        ||||++.+..+|++|++|..+++++|++...++..    ..+|+|+||+.++++.++++|+++++++++
T Consensus        79 ~~v--------GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa  150 (343)
T PRK09880         79 LKE--------GQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA  150 (343)
T ss_pred             CCC--------CCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH
Confidence            999        99999999999999999999999999987766531    357999999999999999999999998887


Q ss_pred             ccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHH
Q 017426          171 MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE  250 (372)
Q Consensus       171 ~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~  250 (372)
                      ...++++||++++.....+|++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++|++.++++++  +++.+
T Consensus       151 ~~~~~~~a~~al~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--~~~~~  228 (343)
T PRK09880        151 FAEPLAVAIHAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQN--DDLDH  228 (343)
T ss_pred             hhcHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCc--ccHHH
Confidence            7778899999998777778999999999999999999999999977889999999999999999999887543  33332


Q ss_pred             HHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccCCCcHHHHHHHH
Q 017426          251 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELL  330 (372)
Q Consensus       251 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ll  330 (372)
                          +.+. .+++|++||++|++..+..+++.++++|+++.+|.......++...+..+++++.++..+.++++++++++
T Consensus       229 ----~~~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~l~  303 (343)
T PRK09880        229 ----YKAE-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWL  303 (343)
T ss_pred             ----Hhcc-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeeccccHHHHHHHH
Confidence                2221 24699999999987788999999999999999997554456666677889999999877778899999999


Q ss_pred             HcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          331 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       331 ~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ++|.+.+.+.++++|++  +++++|++.+.++...+|+++.+
T Consensus       304 ~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        304 ANGVINPLPLLSAEYPF--TDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             HcCCCCchhheEEEEEH--HHHHHHHHHHhcCCCceEEEEeC
Confidence            99999777788999999  99999999999887789999874

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=6.4e-51  Score=356.69  Aligned_cols=337  Identities=28%  Similarity=0.451  Sum_probs=290.0

Q ss_pred             cceeEEEec-CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccc
Q 017426           17 VNMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (372)
Q Consensus        17 ~~~~~~~~~-~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (372)
                      +++++++.+ .++|+++++.+++|+++||+||+.++|+|++|...+.|..+.    .+|.++|||++|+|+++|++|+++
T Consensus         2 k~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~----~~P~vLGHEgAGiVe~VG~gVt~v   77 (366)
T COG1062           2 KTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPE----GFPAVLGHEGAGIVEAVGEGVTSV   77 (366)
T ss_pred             CceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCC----CCceecccccccEEEEecCCcccc
Confidence            568888775 489999999999999999999999999999999999986543    489999999999999999999999


Q ss_pred             cccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc------------------CCCC--CcceeEEEecCC
Q 017426           96 VPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT------------------PPVH--GSLANQVVHPAD  155 (372)
Q Consensus        96 ~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~--g~~~e~~~v~~~  155 (372)
                      ++        ||+|+..+..+|++|++|..+++|||+.......                  ....  ++|+||..+++.
T Consensus        78 kp--------GDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~  149 (366)
T COG1062          78 KP--------GDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEI  149 (366)
T ss_pred             CC--------CCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeeccc
Confidence            99        9999999999999999999999999974332211                  0112  499999999999


Q ss_pred             ceEECCCCCCcccccccchhH-HHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh
Q 017426          156 LCFKLPDNVSLEEGAMCEPLS-VGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI  233 (372)
Q Consensus       156 ~~~~~P~~~~~~~aa~~~~~~-~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l  233 (372)
                      ++++++++.+++.++++.+.. |.+-+. +.+++++|+++.|.|.|++|++++|-|+..|+.++++++.+++|++++++|
T Consensus       150 s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~f  229 (366)
T COG1062         150 SLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKF  229 (366)
T ss_pred             ceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhc
Confidence            999999999999999998654 566554 679999999999999999999999999999999999999999999999999


Q ss_pred             CCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhc-cCcE
Q 017426          234 GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVD  312 (372)
Q Consensus       234 g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~  312 (372)
                      |++++++..+.. +..+.+.+++   ++++|++|||+|....+++++.++.++|+.+.+|.......++.+.+.+ ....
T Consensus       230 GAT~~vn~~~~~-~vv~~i~~~T---~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~gr~  305 (366)
T COG1062         230 GATHFVNPKEVD-DVVEAIVELT---DGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRV  305 (366)
T ss_pred             CCceeecchhhh-hHHHHHHHhc---CCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeeccce
Confidence            999988643221 5777777765   5699999999999999999999999999999999877665665665422 2367


Q ss_pred             EEeeccC----CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          313 VVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       313 i~~~~~~----~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ++|+...    +.+++.+++++.+|++.+..++++.+++  +|++|||+.+.+++. .|.|+.|
T Consensus       306 ~~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~L--e~INeaf~~m~~G~~-IR~Vi~~  366 (366)
T COG1062         306 WKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPL--EDINEAFDLMHEGKS-IRSVIRF  366 (366)
T ss_pred             EEEEeecCCccccchhHHHHHHHcCCCchhHHhhccccH--HHHHHHHHHHhCCce-eeEEecC
Confidence            7776543    7789999999999999999999999999  999999999999955 4666654

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=1.3e-49  Score=371.38  Aligned_cols=336  Identities=33%  Similarity=0.560  Sum_probs=288.0

Q ss_pred             ceeEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccc
Q 017426           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (372)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (372)
                      ||++++.+++.+++.++|.|.|.++||+|||.++++|++|++.+.+.+..  ...+|.++|||++|+|+++|++|++|++
T Consensus         1 mka~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~   78 (339)
T cd08239           1 MRGAVFPGDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRA--PAYQGVIPGHEPAGVVVAVGPGVTHFRV   78 (339)
T ss_pred             CeEEEEecCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCc--cCCCCceeccCceEEEEEECCCCccCCC
Confidence            68889998899999999999999999999999999999999988764321  1235789999999999999999999999


Q ss_pred             cccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-hhH
Q 017426           98 GDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLS  176 (372)
Q Consensus        98 gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~  176 (372)
                              ||+|++.+..+|++|++|..++.++|++.....+...+|+|+||+.++++.++++|+++++++|+.+. ++.
T Consensus        79 --------Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~  150 (339)
T cd08239          79 --------GDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIG  150 (339)
T ss_pred             --------CCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHH
Confidence                    99999999999999999999999999876541222467999999999999999999999999999876 778


Q ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHH
Q 017426          177 VGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       177 ~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~  256 (372)
                      +||++++.+++++|++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++|++.++++..  ++ .+.+.++.
T Consensus       151 ta~~~l~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~--~~-~~~~~~~~  227 (339)
T cd08239         151 TAYHALRRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ--DD-VQEIRELT  227 (339)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc--ch-HHHHHHHh
Confidence            9999998888999999999999999999999999999975888889999999999999998877543  33 44455443


Q ss_pred             HHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCcccc-chhhhccCcEEEeeccC-CCcHHHHHHHHHcCC
Q 017426          257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP-LTPAAVREVDVVGVFRY-KNTWPLCLELLRSGK  334 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~~g~  334 (372)
                        .+.++|++||++|+...+..+++.|+++|+++.+|..... .+. ...+..+++++.++... .++++++++++.+|.
T Consensus       228 --~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~  304 (339)
T cd08239         228 --SGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-TIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHK  304 (339)
T ss_pred             --CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-ccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCC
Confidence              3458999999999987778899999999999999864432 222 23466788999998765 468999999999999


Q ss_pred             CCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          335 IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +.+.+.++++|++  +++++|++.+.++. .+|+|+++
T Consensus       305 i~~~~~i~~~~~l--~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         305 LEVDRLVTHRFGL--DQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             CChhHeEEEEecH--HHHHHHHHHHHcCC-ceEEEEeC
Confidence            9777889999999  99999999988874 79999975

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=3.8e-49  Score=371.58  Aligned_cols=363  Identities=88%  Similarity=1.400  Sum_probs=309.1

Q ss_pred             CCCCCCCccccccchhcceeEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccc
Q 017426            1 MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE   80 (372)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e   80 (372)
                      |||+|||+++-+-.+..++++|+.++..+++.+.+.|.|.++||+|||.++++|++|+....+...+.....+|.++|+|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e   80 (364)
T PLN02702          1 MGKGGMSSGEGSGVEEENMAAWLVGVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHE   80 (364)
T ss_pred             CCCCccccCCCcccccccceEEEecCCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccc
Confidence            89999999999999999999999999999999999999999999999999999999999887633222122457789999


Q ss_pred             eeEEEEEecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEEC
Q 017426           81 CAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL  160 (372)
Q Consensus        81 ~~G~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~  160 (372)
                      ++|+|+++|+++++|++        ||+|++.+...|++|.+|..+..++|++...++....+|+|+||+.++.+.++++
T Consensus        81 ~~G~V~~vG~~v~~~~~--------Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~  152 (364)
T PLN02702         81 CAGIIEEVGSEVKHLVV--------GDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL  152 (364)
T ss_pred             eeEEEEEECCCCCCCCC--------CCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEEC
Confidence            99999999999999999        9999999999999999999999999987655544445799999999999999999


Q ss_pred             CCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEe
Q 017426          161 PDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  240 (372)
Q Consensus       161 P~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~  240 (372)
                      |+++++.++++..++++++++++..++.+|+++||+|+|++|++++|+++.+|++.++++++++++.++++++|++.+++
T Consensus       153 P~~l~~~~aa~~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~  232 (364)
T PLN02702        153 PENVSLEEGAMCEPLSVGVHACRRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVL  232 (364)
T ss_pred             CCCCCHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEe
Confidence            99999999987556667888887788999999999988999999999999999987888889999999999999998877


Q ss_pred             cCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccCC
Q 017426          241 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYK  320 (372)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~  320 (372)
                      ++....++.+.+.++.+..++++|++||++|+...+..++++++++|+++.+|.......++......+++++.++....
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~  312 (364)
T PLN02702        233 VSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRYR  312 (364)
T ss_pred             cCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccCh
Confidence            65444567776665543335689999999997778899999999999999998643333445556778888998877666


Q ss_pred             CcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          321 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       321 ~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      ..++.++++++++.+.+.+.++++|+++++++++|++.+.++...+|+++.
T Consensus       313 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        313 NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             HHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence            678999999999998555567788777668999999999988888999985

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.6e-49  Score=343.89  Aligned_cols=339  Identities=27%  Similarity=0.404  Sum_probs=285.1

Q ss_pred             cccchhcceeEEEecC-C--ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEE
Q 017426           11 KEDGEEVNMAAWLLGV-N--TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK   87 (372)
Q Consensus        11 ~~~~~~~~~~~~~~~~-~--~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~   87 (372)
                      +++.|.+.++..+..+ +  .+++.+++.|+|+++||+|+++|+|+|++|++.++|...-   .++|.++|||.+|+|++
T Consensus         3 ~~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~---s~~PlV~GHEiaG~Vvk   79 (360)
T KOG0023|consen    3 SMSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL---SKYPLVPGHEIAGVVVK   79 (360)
T ss_pred             cccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc---ccCCccCCceeeEEEEE
Confidence            3456667778777744 3  6777999999999999999999999999999999986532   68999999999999999


Q ss_pred             ecCCCccccccccccCCCCCEE-EEcCCcCCCCCccccCCCCCCCCCcccccc-C-----CCCCcceeEEEecCCceEEC
Q 017426           88 VGSEVKTLVPGDRVTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFAT-P-----PVHGSLANQVVHPADLCFKL  160 (372)
Q Consensus        88 vG~~v~~~~~gd~v~~~~Gd~V-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~g~~~e~~~v~~~~~~~~  160 (372)
                      +|++|++|++        |||| +...+.+|+.|.+|..+..++|+++-+... .     .+.|+|++|+++++.+++++
T Consensus        80 vGs~V~~~ki--------GD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kI  151 (360)
T KOG0023|consen   80 VGSNVTGFKI--------GDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKI  151 (360)
T ss_pred             ECCCcccccc--------cCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEEC
Confidence            9999999999        6666 445678899999999999999995443322 2     34566999999999999999


Q ss_pred             CCCCCcccccccchhH-HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh-hHHHHHHHhCCCeE
Q 017426          161 PDNVSLEEGAMCEPLS-VGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD-YRLSVAKEIGADNI  238 (372)
Q Consensus       161 P~~~~~~~aa~~~~~~-~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~-~~~~~~~~lg~~~v  238 (372)
                      |++++.+.||.+.+.. |.|..|++.++.||+++-|.|+|++|.+++|+|+++|. +|+++++++ +|.+..+.||++.+
T Consensus       152 P~~~pl~~aAPlLCaGITvYspLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~f  230 (360)
T KOG0023|consen  152 PENLPLASAAPLLCAGITVYSPLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGADVF  230 (360)
T ss_pred             CCCCChhhccchhhcceEEeehhHHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCccee
Confidence            9999999999888665 78999999999999999999997799999999999999 577777777 77778889999998


Q ss_pred             EecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeecc
Q 017426          239 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR  318 (372)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~  318 (372)
                      ++... ++++.+.+.+.   ..+.+|-+.+.  ....++.++..|+.+|+++.+|.......++..++.++.+.+.|+..
T Consensus       231 v~~~~-d~d~~~~~~~~---~dg~~~~v~~~--a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~v  304 (360)
T KOG0023|consen  231 VDSTE-DPDIMKAIMKT---TDGGIDTVSNL--AEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIV  304 (360)
T ss_pred             EEecC-CHHHHHHHHHh---hcCcceeeeec--cccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeecc
Confidence            87432 35555555443   34566666655  44688999999999999999998877788899999999999999986


Q ss_pred             C-CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          319 Y-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       319 ~-~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      . +.+.++++++..++.+  .+.+ +..++  +++++|++++.+++.+.|.|+++
T Consensus       305 G~~ket~E~Ldf~a~~~i--k~~I-E~v~~--~~v~~a~erm~kgdV~yRfVvD~  354 (360)
T KOG0023|consen  305 GSRKETQEALDFVARGLI--KSPI-ELVKL--SEVNEAYERMEKGDVRYRFVVDV  354 (360)
T ss_pred             ccHHHHHHHHHHHHcCCC--cCce-EEEeh--hHHHHHHHHHHhcCeeEEEEEEc
Confidence            6 7889999999999999  4444 66678  99999999999999999999874

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=1.1e-48  Score=368.97  Aligned_cols=334  Identities=32%  Similarity=0.490  Sum_probs=285.3

Q ss_pred             ceeEEEec---------CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEe
Q 017426           18 NMAAWLLG---------VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV   88 (372)
Q Consensus        18 ~~~~~~~~---------~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   88 (372)
                      |||+++..         ++.+++.++|.|.|+++||+|||.++|+|++|++.+.|...    ..+|.++|||++|+|+++
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~GhE~~G~V~~v   76 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP----RPLPMALGHEAAGVVVEV   76 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC----CCCCccCCccceeEEEEe
Confidence            67777774         36789999999999999999999999999999999887532    356899999999999999


Q ss_pred             cCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC--------------------CCCCccee
Q 017426           89 GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP--------------------PVHGSLAN  148 (372)
Q Consensus        89 G~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~g~~~e  148 (372)
                      |+++++|++        ||||++.+..+|+.|++|..+++++|.+...++..                    ...|+|+|
T Consensus        77 G~~v~~~~~--------GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~ae  148 (371)
T cd08281          77 GEGVTDLEV--------GDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAE  148 (371)
T ss_pred             CCCCCcCCC--------CCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCccccee
Confidence            999999999        99999888889999999999999999875332110                    11379999


Q ss_pred             EEEecCCceEECCCCCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhH
Q 017426          149 QVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYR  226 (372)
Q Consensus       149 ~~~v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~  226 (372)
                      |+.++++.++++|+++++++|+.+. .+.+||+++ +.+++++|++|||+|+|++|++++|+|+.+|++.|++++++++|
T Consensus       149 y~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r  228 (371)
T cd08281         149 YAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDK  228 (371)
T ss_pred             eEEecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHH
Confidence            9999999999999999999999876 567899887 56889999999999999999999999999999668889999999


Q ss_pred             HHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC--Cccccch
Q 017426          227 LSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVPLT  304 (372)
Q Consensus       227 ~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~  304 (372)
                      .++++++|++.++++.  .+++.+.++++.   ++++|++|||+|.+..+..++++++++|+++.+|....  ...++..
T Consensus       229 ~~~a~~~Ga~~~i~~~--~~~~~~~i~~~~---~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~  303 (371)
T cd08281         229 LALARELGATATVNAG--DPNAVEQVRELT---GGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPAL  303 (371)
T ss_pred             HHHHHHcCCceEeCCC--chhHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHH
Confidence            9999999999887653  356777776654   34899999999987789999999999999999986532  2345555


Q ss_pred             hhhccCcEEEeeccC----CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEE
Q 017426          305 PAAVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  370 (372)
Q Consensus       305 ~~~~~~~~i~~~~~~----~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv  370 (372)
                      .+..+++++.++...    .++++++++++++|++.+.++++++|++  +++++|++.+.++...+|+++
T Consensus       304 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         304 SLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPL--DEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             HHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecH--HHHHHHHHHHhCCCceeeeeC
Confidence            677899999998654    4678899999999999777889999999  999999999999988877764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.4e-48  Score=369.40  Aligned_cols=344  Identities=25%  Similarity=0.411  Sum_probs=286.9

Q ss_pred             cchhcceeEEEecCC-ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCC
Q 017426           13 DGEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (372)
Q Consensus        13 ~~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (372)
                      ..+.+||++++.++. .+.+.++|.|.|+++||+|||+++|+|++|++.+.|...  ....+|.++|||++|+|+++|++
T Consensus         6 ~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~--~~~~~p~i~GhE~~G~V~~vG~~   83 (381)
T PLN02740          6 GKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENE--AQRAYPRILGHEAAGIVESVGEG   83 (381)
T ss_pred             ccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCc--ccCCCCccccccceEEEEEeCCC
Confidence            355679999998775 588999999999999999999999999999999887532  12356899999999999999999


Q ss_pred             CccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc-----------------------CCCCCccee
Q 017426           92 VKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-----------------------PPVHGSLAN  148 (372)
Q Consensus        92 v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~g~~~e  148 (372)
                      +++|++        ||||++.+..+|+.|++|..+..++|++....+.                       ....|+|+|
T Consensus        84 v~~~~v--------GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~ae  155 (381)
T PLN02740         84 VEDLKA--------GDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTE  155 (381)
T ss_pred             CCcCCC--------CCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCcccee
Confidence            999999        9999999999999999999999999998653221                       002599999


Q ss_pred             EEEecCCceEECCCCCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhH
Q 017426          149 QVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYR  226 (372)
Q Consensus       149 ~~~v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~  226 (372)
                      |+.++.+.++++|+++++++++.+. .+.+||+++ +.+++++|++|||+|+|++|++++|+|+.+|++.|++++++++|
T Consensus       156 y~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r  235 (381)
T PLN02740        156 YTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEK  235 (381)
T ss_pred             EEEEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHH
Confidence            9999999999999999999988776 567899876 55889999999999999999999999999999668889999999


Q ss_pred             HHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccC-CEEEEEcCCCCCccccchh
Q 017426          227 LSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPLTP  305 (372)
Q Consensus       227 ~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~  305 (372)
                      .++++++|++.++++...+.++.+.++++.   ++++|++||++|++..+..++..++++ |+++.+|.......++...
T Consensus       236 ~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~---~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~  312 (381)
T PLN02740        236 FEKGKEMGITDFINPKDSDKPVHERIREMT---GGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHP  312 (381)
T ss_pred             HHHHHHcCCcEEEecccccchHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccH
Confidence            999999999988875543345666676654   238999999999888899999999986 9999998654332223322


Q ss_pred             h-hccCcEEEeeccC----CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          306 A-AVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       306 ~-~~~~~~i~~~~~~----~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      . ..+++++.|+...    ...+.++++++.+|.+.+.+.++++|++  +|+++|++.+.+++. .|+++++
T Consensus       313 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l--~e~~~A~~~~~~~~~-~k~~~~~  381 (381)
T PLN02740        313 MELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPF--EKINEAFQLLEDGKA-LRCLLHL  381 (381)
T ss_pred             HHHhcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecH--HHHHHHHHHHHCCCc-eeEEEeC
Confidence            2 3467888876543    2468899999999999777789999999  999999999988854 6999864

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=6.9e-48  Score=363.73  Aligned_cols=337  Identities=23%  Similarity=0.396  Sum_probs=282.3

Q ss_pred             hcceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           16 EVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        16 ~~~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      ..||++++.++ +.+++.++|.|.|+++||+|||.++|+|++|++.+.+.      ..+|.++|||++|+|+++|++|++
T Consensus        11 ~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~------~~~p~i~GhE~~G~V~~vG~~v~~   84 (378)
T PLN02827         11 ITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ------ALFPRIFGHEASGIVESIGEGVTE   84 (378)
T ss_pred             ceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCC------CCCCeeecccceEEEEEcCCCCcc
Confidence            45899888865 47999999999999999999999999999999987653      135889999999999999999999


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc--------------------CCCCCcceeEEEecC
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------------------PPVHGSLANQVVHPA  154 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~e~~~v~~  154 (372)
                      |++        ||+|++.+..+|++|.+|+.+.+++|++......                    ....|+|+||+.+++
T Consensus        85 ~~~--------GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~  156 (378)
T PLN02827         85 FEK--------GDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHS  156 (378)
T ss_pred             cCC--------CCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEech
Confidence            999        9999999888999999999999999987532110                    002489999999999


Q ss_pred             CceEECCCCCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH
Q 017426          155 DLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE  232 (372)
Q Consensus       155 ~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~  232 (372)
                      +.++++|+++++++++.+. .+.++|+++ +.+++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.+++++
T Consensus       157 ~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~  236 (378)
T PLN02827        157 GCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKT  236 (378)
T ss_pred             hheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence            9999999999999888776 456778766 45889999999999999999999999999999778888889999999999


Q ss_pred             hCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccC-CEEEEEcCCCCCccccc-hhhhccC
Q 017426          233 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPL-TPAAVRE  310 (372)
Q Consensus       233 lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~  310 (372)
                      +|++.++++....+++.+.+++++   ++++|++||++|.+..+..+++.++++ |+++.+|.......+.. ..+..++
T Consensus       237 lGa~~~i~~~~~~~~~~~~v~~~~---~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~  313 (378)
T PLN02827        237 FGVTDFINPNDLSEPIQQVIKRMT---GGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSG  313 (378)
T ss_pred             cCCcEEEcccccchHHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcC
Confidence            999988775433345666666654   348999999999877889999999998 99999987543333333 3467788


Q ss_pred             cEEEeeccC----CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          311 VDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       311 ~~i~~~~~~----~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +++.|+...    ..++.++++++++|.+.+.+.++++|++  +++++|++.+.+++. .|+|+.+
T Consensus       314 ~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l--e~~~~A~~~~~~~~~-~k~vi~~  376 (378)
T PLN02827        314 RTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSF--DEINKAFELMREGKC-LRCVIHM  376 (378)
T ss_pred             ceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecH--HHHHHHHHHHHCCCc-eEEEEEe
Confidence            999987653    3478899999999999666689999999  999999999998865 6998864

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=9.2e-48  Score=357.55  Aligned_cols=337  Identities=36%  Similarity=0.588  Sum_probs=278.6

Q ss_pred             ceeEEEecCC-ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCc-ccccceeEEEEEecCCCccc
Q 017426           18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM-VIGHECAGVIEKVGSEVKTL   95 (372)
Q Consensus        18 ~~~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~-~~G~e~~G~V~~vG~~v~~~   95 (372)
                      ||++++..+. ...+.+.+.|.+.|+||+|||.++|||++|++.+.+...   ....|. ++|||++|+|+++| .++.|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~---~~~~~~~i~GHE~~G~V~evG-~~~~~   76 (350)
T COG1063           1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEP---FVPPGDIILGHEFVGEVVEVG-VVRGF   76 (350)
T ss_pred             CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCC---CCCCCCcccCccceEEEEEec-cccCC
Confidence            5677777554 444777777778999999999999999999999997432   234444 89999999999999 77889


Q ss_pred             cccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC----CCCCcceeEEEecCCceEEC-CCCCCccccc
Q 017426           96 VPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP----PVHGSLANQVVHPADLCFKL-PDNVSLEEGA  170 (372)
Q Consensus        96 ~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~e~~~v~~~~~~~~-P~~~~~~~aa  170 (372)
                      ++        ||||++.++.+|++|++|..+.+++|++..+++..    ..+|+|+||+.+|.++++.+ |+++++++|+
T Consensus        77 ~~--------GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~~~~aa  148 (350)
T COG1063          77 KV--------GDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAA  148 (350)
T ss_pred             CC--------CCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCChhhhh
Confidence            99        99999999999999999999999999977666553    25799999999998666555 7877888888


Q ss_pred             ccchhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH-hCCCeEEecCCCcccH
Q 017426          171 MCEPLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDI  248 (372)
Q Consensus       171 ~~~~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~  248 (372)
                      +..++++++++. .....+++++|+|+|+|++|++++++++.+|+..|++++.+++|++++++ .+++.+.+. . .++.
T Consensus       149 l~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~-~-~~~~  226 (350)
T COG1063         149 LTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNP-S-EDDA  226 (350)
T ss_pred             hcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecC-c-cccH
Confidence            888999998874 44445666699999999999999999999999999999999999999999 555554432 1 1244


Q ss_pred             HHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCc-cccchhhhccCcEEEeecc-C-CCcHHH
Q 017426          249 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFR-Y-KNTWPL  325 (372)
Q Consensus       249 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~-~-~~~~~~  325 (372)
                      ...+.+++  .+.++|++|||+|.+..+.++++.++++|+++.+|...... .++...+..|++++.|+.. . ...++.
T Consensus       227 ~~~~~~~t--~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~  304 (350)
T COG1063         227 GAEILELT--GGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFER  304 (350)
T ss_pred             HHHHHHHh--CCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHH
Confidence            44454443  35589999999999988999999999999999999876655 5667778899999999955 3 568999


Q ss_pred             HHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCC-ceEEEEeC
Q 017426          326 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMFNL  372 (372)
Q Consensus       326 ~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~-~gkvvv~~  372 (372)
                      +++++++|++.+.+++++.+++  +++++|++.+.+... ..|+++.+
T Consensus       305 ~~~ll~~g~i~~~~lit~~~~~--~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         305 ALDLLASGKIDPEKLITHRLPL--DDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             HHHHHHcCCCChhHceEeeccH--HHHHHHHHHHHhcCCCeEEEEecC
Confidence            9999999999988888999888  999999999887544 66998864

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=1.4e-47  Score=360.02  Aligned_cols=337  Identities=28%  Similarity=0.463  Sum_probs=283.8

Q ss_pred             cceeEEEecCC-ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccc
Q 017426           17 VNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (372)
Q Consensus        17 ~~~~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (372)
                      +||++++.+++ ++++.++|.|.|+++||+|||.++|+|++|++...|...    ..+|.++|||++|+|+++|++|++|
T Consensus         1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v~~~   76 (358)
T TIGR03451         1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN----DEFPFLLGHEAAGVVEAVGEGVTDV   76 (358)
T ss_pred             CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc----ccCCcccccceEEEEEEeCCCCccc
Confidence            58999999764 589999999999999999999999999999998877432    3468899999999999999999999


Q ss_pred             cccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--------ccC----CCCCcceeEEEecCCceEECCCC
Q 017426           96 VPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--------ATP----PVHGSLANQVVHPADLCFKLPDN  163 (372)
Q Consensus        96 ~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~----~~~g~~~e~~~v~~~~~~~~P~~  163 (372)
                      ++        ||+|++.+...|+.|.+|..++.++|......        +..    ...|+|+||+.++++.++++|++
T Consensus        77 ~~--------GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~  148 (358)
T TIGR03451        77 AP--------GDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPA  148 (358)
T ss_pred             CC--------CCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCC
Confidence            99        99999999999999999999999999753211        100    13599999999999999999999


Q ss_pred             CCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEec
Q 017426          164 VSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  241 (372)
Q Consensus       164 ~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~  241 (372)
                      +++++|+.+. .+.++|.++ +.+++++|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++.++++
T Consensus       149 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~  228 (358)
T TIGR03451       149 ADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNS  228 (358)
T ss_pred             CChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcC
Confidence            9999988776 566788776 45789999999999999999999999999999778899999999999999999888765


Q ss_pred             CCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC--ccccchhhhccCcEEEeeccC
Q 017426          242 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGVFRY  319 (372)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~  319 (372)
                      .  .+++.+.+++..  .+.++|++||++|++..+..+++.++++|+++.+|.....  ..++...+..+++++.+++..
T Consensus       229 ~--~~~~~~~i~~~~--~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~  304 (358)
T TIGR03451       229 S--GTDPVEAIRALT--GGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYG  304 (358)
T ss_pred             C--CcCHHHHHHHHh--CCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecC
Confidence            3  356666666654  3457999999999877899999999999999999965432  234444567788888887532


Q ss_pred             ----CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          320 ----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       320 ----~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                          .+.++++++++++|.+.+.+.++++|++  +++++|++.+.+++.. |+++.+
T Consensus       305 ~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~~~-k~~~~~  358 (358)
T TIGR03451       305 DCLPERDFPMLVDLYLQGRLPLDAFVTERIGL--DDVEEAFDKMHAGDVL-RSVVEL  358 (358)
T ss_pred             CCCcHHHHHHHHHHHHcCCCCchheEEEEecH--HHHHHHHHHHhCCCcc-eeEEeC
Confidence                4678899999999999777788999999  9999999999888664 777753

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=4.9e-47  Score=357.18  Aligned_cols=337  Identities=26%  Similarity=0.399  Sum_probs=277.2

Q ss_pred             ceeEEEec-CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~-~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      ||++++.. ...+++.++|.|.|+++||+|||.++|+|++|++...|.+..   ..+|.++|||++|+|+++|++|++|+
T Consensus         2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~---~~~p~i~GhE~~G~V~~vG~~v~~~~   78 (368)
T TIGR02818         2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE---GVFPVILGHEGAGIVEAVGEGVTSVK   78 (368)
T ss_pred             ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC---CCCCeeeccccEEEEEEECCCCccCC
Confidence            67777664 457999999999999999999999999999999998875421   35689999999999999999999999


Q ss_pred             ccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---cc-----------------CCCCCcceeEEEecCCc
Q 017426           97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPVHGSLANQVVHPADL  156 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~g~~~e~~~v~~~~  156 (372)
                      +        ||||++.+..+|++|++|..++.++|.+....   +.                 ....|+|+||+.+|++.
T Consensus        79 ~--------GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~  150 (368)
T TIGR02818        79 V--------GDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEIS  150 (368)
T ss_pred             C--------CCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhh
Confidence            9        99999988899999999999999999875321   10                 01247999999999999


Q ss_pred             eEECCCCCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC
Q 017426          157 CFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG  234 (372)
Q Consensus       157 ~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg  234 (372)
                      ++++|+++++++++.++ ++.+||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|
T Consensus       151 ~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~G  230 (368)
T TIGR02818       151 LAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLG  230 (368)
T ss_pred             eEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhC
Confidence            99999999999999876 678899987 5688999999999999999999999999999977889999999999999999


Q ss_pred             CCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccC-CEEEEEcCCCCC--ccccchhhhccCc
Q 017426          235 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHE--MTVPLTPAAVREV  311 (372)
Q Consensus       235 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~  311 (372)
                      ++.++++.+...++.+.+++++   .+++|++||++|++..+..++++++++ |+++.+|.....  ..+....+. +..
T Consensus       231 a~~~i~~~~~~~~~~~~v~~~~---~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~  306 (368)
T TIGR02818       231 ATDCVNPNDYDKPIQEVIVEIT---DGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV-TGR  306 (368)
T ss_pred             CCeEEcccccchhHHHHHHHHh---CCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh-ccc
Confidence            9988875432345556666654   348999999999877889999999886 999999864321  222222222 233


Q ss_pred             EEEeeccC----CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          312 DVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       312 ~i~~~~~~----~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      .+.++...    ..++.++++++.+|.+.+.++++++|++  +++++|++.+.++. ..|+++.|
T Consensus       307 ~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l--~~~~~A~~~~~~~~-~~k~~v~~  368 (368)
T TIGR02818       307 VWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPL--EDINEAFDLMHEGK-SIRTVIHY  368 (368)
T ss_pred             eEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecH--HHHHHHHHHHhCCC-ceeEEeeC
Confidence            45555432    3468999999999999777889999999  99999999998874 47999875

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-47  Score=354.00  Aligned_cols=335  Identities=29%  Similarity=0.521  Sum_probs=283.7

Q ss_pred             ceeEEEecCCceeEEEecCCCC-CCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      ||++++++++.+++.+.|.|.| .++||+|||.++++|++|+..+...  +.  ..+|.++|||++|+|+++|+++++|+
T Consensus         1 Mka~~~~~~~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~--~~--~~~p~i~G~e~~G~V~~vG~~v~~~~   76 (347)
T PRK10309          1 MKSVVNDTDGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKN--GA--HYYPITLGHEFSGYVEAVGSGVDDLH   76 (347)
T ss_pred             CceEEEeCCCceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCC--CC--CCCCcccccceEEEEEEeCCCCCCCC
Confidence            6888898888899999999998 6999999999999999998754321  10  13588999999999999999999999


Q ss_pred             ccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccchhH
Q 017426           97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS  176 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~  176 (372)
                      +        ||+|++.+..+|++|++|..+..++|.....++. ...|+|+||+.++++.++++|+++++++|+.+.+++
T Consensus        77 v--------Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~~~~  147 (347)
T PRK10309         77 P--------GDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGS-RRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIEPIT  147 (347)
T ss_pred             C--------CCEEEECCCcCCCCCcchhCcCcccCCCcceecc-CCCCccceeEEeehHHeEECcCCCCHHHhhhhhHHH
Confidence            9        9999999999999999999999999988765554 458999999999999999999999999999876777


Q ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHH
Q 017426          177 VGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       177 ~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~  256 (372)
                      +++++++...+++|++|||+|+|++|++++|+|+.+|++.++++++++++.++++++|++.+++++.  .+ .+.+.++.
T Consensus       148 ~~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~-~~~~~~~~  224 (347)
T PRK10309        148 VGLHAFHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE--MS-APQIQSVL  224 (347)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc--cC-HHHHHHHh
Confidence            7888887788899999999998999999999999999976788889999999999999988876543  23 33444443


Q ss_pred             HHcCCcce-EEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCcccc---chhhhccCcEEEeeccC------CCcHHHH
Q 017426          257 KAMGTGID-VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP---LTPAAVREVDVVGVFRY------KNTWPLC  326 (372)
Q Consensus       257 ~~~~~~~d-~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~~~~~~~i~~~~~~------~~~~~~~  326 (372)
                        .+.++| ++|||+|+...+..+++.++++|+++.+|......+++   ...+..+++++.++..+      .++++++
T Consensus       225 --~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~  302 (347)
T PRK10309        225 --RELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETA  302 (347)
T ss_pred             --cCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHH
Confidence              245788 99999998878899999999999999998654332222   23466788899987643      2578899


Q ss_pred             HHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          327 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       327 ~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ++++++|.+.+.+.++++|++  +++++|++.+.++...||+|+++
T Consensus       303 ~~~~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        303 SRLLTERKLSLEPLIAHRGSF--ESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             HHHHHcCCCCchhheEEEeeH--HHHHHHHHHHhcCCcceEEEEeC
Confidence            999999999778889999999  99999999999988889999875

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=4e-47  Score=359.22  Aligned_cols=336  Identities=23%  Similarity=0.426  Sum_probs=269.0

Q ss_pred             ceeEEEecCCceeEEEecCCCCC-------CCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecC
Q 017426           18 NMAAWLLGVNTLKIQPFELPSLG-------PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (372)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~-------~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (372)
                      ||++++.+++.++++++|.|.|+       ++||||||.++|+|++|++.+.|...    ..+|.++|||++|+|+++|+
T Consensus         3 mka~v~~~~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~----~~~p~i~GhE~~G~V~~vG~   78 (393)
T TIGR02819         3 NRGVVYLGPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT----APTGLVLGHEITGEVIEKGR   78 (393)
T ss_pred             ceEEEEecCCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC----CCCCccccceeEEEEEEEcC
Confidence            78999998889999999999874       68999999999999999999887431    34689999999999999999


Q ss_pred             CCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcc------ccccC---CCCCcceeEEEecCC--ceEE
Q 017426           91 EVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK------FFATP---PVHGSLANQVVHPAD--LCFK  159 (372)
Q Consensus        91 ~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~---~~~g~~~e~~~v~~~--~~~~  159 (372)
                      +|++|++        ||||.+.+...|++|++|..+++++|++..      .++..   ..+|+|+||+.+|+.  .+++
T Consensus        79 ~V~~~~v--------GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~  150 (393)
T TIGR02819        79 DVEFIKI--------GDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLK  150 (393)
T ss_pred             ccccccC--------CCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEE
Confidence            9999999        999999999999999999999999999753      12221   246999999999964  7999


Q ss_pred             CCCCCCc----ccccc-cchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC
Q 017426          160 LPDNVSL----EEGAM-CEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG  234 (372)
Q Consensus       160 ~P~~~~~----~~aa~-~~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg  234 (372)
                      +|++++.    ..++. ..++.++|++++++++++|++|||.|+|++|++++|+|+.+|++.+++++.+++|.++++++|
T Consensus       151 vP~~~~~~~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~G  230 (393)
T TIGR02819       151 FPDRDQALEKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFG  230 (393)
T ss_pred             CCCcccccccccceeeeccHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcC
Confidence            9998653    23343 447889999998888999999999888999999999999999987777778899999999999


Q ss_pred             CCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcH--------------HHHHHHHHHhccCCEEEEEcCCC-CCc
Q 017426          235 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN--------------KTMSTALGATCAGGKVCLVGMGH-HEM  299 (372)
Q Consensus       235 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~--------------~~~~~~~~~l~~~G~~v~~g~~~-~~~  299 (372)
                      ++. +++. ...++.+.+.+++  .+.++|++||++|.+              ..++++++.++++|+++.+|... ...
T Consensus       231 a~~-v~~~-~~~~~~~~v~~~~--~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~  306 (393)
T TIGR02819       231 CET-VDLS-KDATLPEQIEQIL--GEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDP  306 (393)
T ss_pred             CeE-EecC-CcccHHHHHHHHc--CCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCccc
Confidence            974 4332 2245666666543  345799999999985              47899999999999999999753 111


Q ss_pred             -c-----------ccchhhhccCcEEEeeccCC-CcHHHHHHHHHcCCCCCCCceE-EEecCChHHHHHHHHHHhcCCCc
Q 017426          300 -T-----------VPLTPAAVREVDVVGVFRYK-NTWPLCLELLRSGKIDVKPLVT-HRFGFSQKEVEEAFETSARGGTA  365 (372)
Q Consensus       300 -~-----------~~~~~~~~~~~~i~~~~~~~-~~~~~~~~ll~~g~~~~~~~~~-~~~~~~~~~~~~A~~~~~~~~~~  365 (372)
                       .           +.......+.+++.+..... +.+.++++++.+|++.+.++++ ++|++  +++++|++.+.++ ..
T Consensus       307 ~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l--~~~~~a~~~~~~~-~~  383 (393)
T TIGR02819       307 GAVDAAAKTGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISL--DDAPEGYAEFDAG-AA  383 (393)
T ss_pred             ccccccccccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecH--HHHHHHHHHHhhC-Cc
Confidence             1           11222344556666543222 3347899999999997666676 78999  9999999999887 45


Q ss_pred             eEEEEeC
Q 017426          366 IKVMFNL  372 (372)
Q Consensus       366 gkvvv~~  372 (372)
                      +|+++++
T Consensus       384 ~Kvvi~~  390 (393)
T TIGR02819       384 KKFVIDP  390 (393)
T ss_pred             eEEEEeC
Confidence            8999864

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=7.4e-47  Score=354.61  Aligned_cols=341  Identities=22%  Similarity=0.344  Sum_probs=272.8

Q ss_pred             CCccccccchhcceeEEEec-CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEE
Q 017426            6 MSQGEKEDGEEVNMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV   84 (372)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~   84 (372)
                      |+.+-.+.-++.+.+.+..+ .+.+++.+++.|.|+++||+|||.++|+|++|++.+.|...   ...+|.++|||++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~---~~~~p~i~GhE~~G~   77 (360)
T PLN02586          1 MAKSPEEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWG---FTRYPIVPGHEIVGI   77 (360)
T ss_pred             CCCChhhhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcC---CCCCCccCCcceeEE
Confidence            44433334444455555554 46788899999999999999999999999999999876432   135688999999999


Q ss_pred             EEEecCCCccccccccccCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCce
Q 017426           85 IEKVGSEVKTLVPGDRVTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLC  157 (372)
Q Consensus        85 V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~v~~~~~  157 (372)
                      |+++|++|++|++        ||+|++.+. .+|+.|++|..+.+++|++..+..      +...+|+|+||+.+|++.+
T Consensus        78 V~~vG~~v~~~~v--------GdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~  149 (360)
T PLN02586         78 VTKLGKNVKKFKE--------GDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFV  149 (360)
T ss_pred             EEEECCCCCccCC--------CCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHe
Confidence            9999999999999        999986543 579999999999999999865431      1234799999999999999


Q ss_pred             EECCCCCCcccccccc-hhHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh-hHHHHHHHhC
Q 017426          158 FKLPDNVSLEEGAMCE-PLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD-YRLSVAKEIG  234 (372)
Q Consensus       158 ~~~P~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~-~~~~~~~~lg  234 (372)
                      +++|+++++++|+.+. .+.++|+++.. ..+++|++|||.|+|++|++++|+|+.+|++ +++++.++ ++.+.++++|
T Consensus       150 ~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~-vi~~~~~~~~~~~~~~~~G  228 (360)
T PLN02586        150 LRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISSSSNKEDEAINRLG  228 (360)
T ss_pred             eeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCcchhhhHHHhCC
Confidence            9999999999999776 45678988865 5578999999999999999999999999995 55554544 4566778999


Q ss_pred             CCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEE
Q 017426          235 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV  314 (372)
Q Consensus       235 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~  314 (372)
                      ++.++++..  .   +.+++..    +++|++||++|....+..++++++++|+++.+|.......++...+..+...+.
T Consensus       229 a~~vi~~~~--~---~~~~~~~----~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~  299 (360)
T PLN02586        229 ADSFLVSTD--P---EKMKAAI----GTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVG  299 (360)
T ss_pred             CcEEEcCCC--H---HHHHhhc----CCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEE
Confidence            988876432  1   2343332    369999999998778899999999999999998654444555666677778887


Q ss_pred             eeccC-CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          315 GVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       315 ~~~~~-~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ++..+ .++++++++++++|++.  +.+ ++|++  +++++|++.+.+++..||+|+++
T Consensus       300 g~~~~~~~~~~~~~~li~~g~i~--~~~-~~~~l--~~~~~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        300 GSDIGGIKETQEMLDFCAKHNIT--ADI-ELIRM--DEINTAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             EcCcCCHHHHHHHHHHHHhCCCC--CcE-EEEeH--HHHHHHHHHHHcCCCcEEEEEEc
Confidence            77654 45789999999999994  444 57888  99999999999998889999874

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.3e-47  Score=327.84  Aligned_cols=342  Identities=26%  Similarity=0.405  Sum_probs=293.8

Q ss_pred             chhcceeEEEec-CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCC
Q 017426           14 GEEVNMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (372)
Q Consensus        14 ~~~~~~~~~~~~-~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (372)
                      ...+.||++.-. ..+|.++++..++|+.+||+||+.++++|++|...++|..   ....+|.++|||.+|+|+++|.+|
T Consensus         4 kvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~---~~~~fP~IlGHEaaGIVESvGegV   80 (375)
T KOG0022|consen    4 KVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKD---PEGLFPVILGHEAAGIVESVGEGV   80 (375)
T ss_pred             CceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCC---ccccCceEecccceeEEEEecCCc
Confidence            345689998664 5899999999999999999999999999999999999854   335789999999999999999999


Q ss_pred             ccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc--------CCC-----------CC--cceeEEE
Q 017426           93 KTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------PPV-----------HG--SLANQVV  151 (372)
Q Consensus        93 ~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-----------~g--~~~e~~~  151 (372)
                      ++|++        ||+|+..+...|++|.+|..+..|+|+.......        ..+           .|  +|+||.+
T Consensus        81 ~~vk~--------GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTV  152 (375)
T KOG0022|consen   81 TTVKP--------GDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTV  152 (375)
T ss_pred             cccCC--------CCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEE
Confidence            99999        9999999999999999999999999966555432        111           13  9999999


Q ss_pred             ecCCceEECCCCCCcccccccch-hHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHH
Q 017426          152 HPADLCFKLPDNVSLEEGAMCEP-LSVGVHA-CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV  229 (372)
Q Consensus       152 v~~~~~~~~P~~~~~~~aa~~~~-~~~a~~~-l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~  229 (372)
                      ++...+.++++..+++.++++.+ ..|.|-+ ++.++++||+++.|+|.|++|+++++-||..|+.++++++.+++|.+.
T Consensus       153 v~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~  232 (375)
T KOG0022|consen  153 VDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEK  232 (375)
T ss_pred             eecceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHH
Confidence            99999999999999999999984 5678865 578999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccC-CEEEEEcCCCCCccccchhh-h
Q 017426          230 AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPLTPA-A  307 (372)
Q Consensus       230 ~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~  307 (372)
                      ++++|+.++++..+......+.+++++   ++++|+-|||+|..+.+++++.+...+ |.-+.+|.......+.++++ .
T Consensus       233 ak~fGaTe~iNp~d~~~~i~evi~EmT---dgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l  309 (375)
T KOG0022|consen  233 AKEFGATEFINPKDLKKPIQEVIIEMT---DGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQL  309 (375)
T ss_pred             HHhcCcceecChhhccccHHHHHHHHh---cCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhh
Confidence            999999999875433334666666665   689999999999999999999999888 99999997766556666654 3


Q ss_pred             ccCcEEEeec----cCCCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          308 VREVDVVGVF----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       308 ~~~~~i~~~~----~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      .+..++.|+.    ....+++.+++.+.++++++...++|.++|  +++++||+.+.+|+.. |.|+.+
T Consensus       310 ~~GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f--~~In~AF~ll~~Gksi-R~vl~~  375 (375)
T KOG0022|consen  310 VTGRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPF--EEINKAFDLLHEGKSI-RCVLWM  375 (375)
T ss_pred             ccccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCH--HHHHHHHHHHhCCceE-EEEEeC
Confidence            3455555543    237789999999999999999999999999  9999999999999665 777754

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=2.2e-46  Score=353.39  Aligned_cols=338  Identities=25%  Similarity=0.431  Sum_probs=280.4

Q ss_pred             cceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccc
Q 017426           17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (372)
Q Consensus        17 ~~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (372)
                      +||++++..+ ..++++++|.|+|+++||+|||.++|+|++|++.+.|...   ...+|.++|||++|+|+++|++|++|
T Consensus         2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~   78 (369)
T cd08301           2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQ---TPLFPRILGHEAAGIVESVGEGVTDL   78 (369)
T ss_pred             ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCC---CCCCCcccccccceEEEEeCCCCCcc
Confidence            6899998754 5799999999999999999999999999999999887542   23568999999999999999999999


Q ss_pred             cccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---cc------------------CCCCCcceeEEEecC
Q 017426           96 VPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT------------------PPVHGSLANQVVHPA  154 (372)
Q Consensus        96 ~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------------~~~~g~~~e~~~v~~  154 (372)
                      ++        ||||++.+..+|++|++|..+++++|.+....   +.                  ....|+|+||+.+++
T Consensus        79 ~~--------GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~  150 (369)
T cd08301          79 KP--------GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHV  150 (369)
T ss_pred             cc--------CCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEec
Confidence            99        99999999999999999999999999876432   00                  003489999999999


Q ss_pred             CceEECCCCCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH
Q 017426          155 DLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE  232 (372)
Q Consensus       155 ~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~  232 (372)
                      ++++++|+++++++|++++ .+.++|+++ +.+++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.+++++
T Consensus       151 ~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~  230 (369)
T cd08301         151 GCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKK  230 (369)
T ss_pred             ccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence            9999999999999998776 567888876 45889999999999999999999999999998668899999999999999


Q ss_pred             hCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccC-CEEEEEcCCCCCccccchh-hhccC
Q 017426          233 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPLTP-AAVRE  310 (372)
Q Consensus       233 lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~-~~~~~  310 (372)
                      +|++.++++.....++.+.++++.   ++++|++||++|+...+..++.+++++ |+++.+|.......+.+.. ...++
T Consensus       231 ~Ga~~~i~~~~~~~~~~~~v~~~~---~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~  307 (369)
T cd08301         231 FGVTEFVNPKDHDKPVQEVIAEMT---GGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNG  307 (369)
T ss_pred             cCCceEEcccccchhHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcC
Confidence            999888765432234656666654   348999999999877888999999996 9999998754322222222 13467


Q ss_pred             cEEEeeccC----CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          311 VDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       311 ~~i~~~~~~----~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      +++.++...    .++++++++++.+|.+.+.+.++++|++  +++++|++.+.+++. .|+++.
T Consensus       308 ~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~k~~~~  369 (369)
T cd08301         308 RTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPF--SEINKAFDLLLKGEC-LRCILH  369 (369)
T ss_pred             CeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecH--HHHHHHHHHHHCCCc-eeEEeC
Confidence            888887543    3468899999999998777788999999  999999999999865 488863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=8.6e-47  Score=346.51  Aligned_cols=310  Identities=32%  Similarity=0.420  Sum_probs=257.6

Q ss_pred             ceeEEEec---CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        18 ~~~~~~~~---~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      ||++++..   ++.+++.++|.|.|+++||||||+++|+||.|+.+++|..  ....++|.++|.|++|+|+++|++|++
T Consensus         1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~--~~~~~~P~i~G~d~aG~V~avG~~V~~   78 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLA--PPVRPLPFIPGSEAAGVVVAVGSGVTG   78 (326)
T ss_pred             CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCC--CCCCCCCCcccceeEEEEEEeCCCCCC
Confidence            57777763   4459999999999999999999999999999999999851  222468999999999999999999999


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-  173 (372)
                      |++        ||||+..+ ..                        ..+|+|+||+.+|+++++++|+++++++||+++ 
T Consensus        79 ~~~--------GdrV~~~~-~~------------------------~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~  125 (326)
T COG0604          79 FKV--------GDRVAALG-GV------------------------GRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPL  125 (326)
T ss_pred             cCC--------CCEEEEcc-CC------------------------CCCCcceeEEEecHHHceeCCCCCCHHHHHHHHH
Confidence            999        88877632 00                        036999999999999999999999999999988 


Q ss_pred             hhHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHH
Q 017426          174 PLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE  251 (372)
Q Consensus       174 ~~~~a~~~l~~-~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~  251 (372)
                      .+.|||+++.. .++++|++|||+|+ |++|++++|||+++|+. ++++.+++++.++++++|++++++|.+  ++|.+.
T Consensus       126 ~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~-~v~~~~s~~k~~~~~~lGAd~vi~y~~--~~~~~~  202 (326)
T COG0604         126 AGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGAT-VVAVVSSSEKLELLKELGADHVINYRE--EDFVEQ  202 (326)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCc-EEEEecCHHHHHHHHhcCCCEEEcCCc--ccHHHH
Confidence            67799999965 88999999999986 99999999999999984 555556677777999999999998755  569999


Q ss_pred             HHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCC--CCccccchhhhccCcEEEeeccC-------CCc
Q 017426          252 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH--HEMTVPLTPAAVREVDVVGVFRY-------KNT  322 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~-------~~~  322 (372)
                      +++++  .+.++|+|||++|+. .+..+++.|+++|+++.++...  ....+++..+..+.+...+....       .+.
T Consensus       203 v~~~t--~g~gvDvv~D~vG~~-~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  279 (326)
T COG0604         203 VRELT--GGKGVDVVLDTVGGD-TFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEA  279 (326)
T ss_pred             HHHHc--CCCCceEEEECCCHH-HHHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHH
Confidence            98886  356899999999975 8889999999999999998655  33445566677788888877655       246


Q ss_pred             HHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhc-CCCceEEEEeC
Q 017426          323 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSAR-GGTAIKVMFNL  372 (372)
Q Consensus       323 ~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~-~~~~gkvvv~~  372 (372)
                      ++++.+++++|.+  ++.+.++|++  ++..++..+... +...||+|+++
T Consensus       280 ~~~l~~~~~~g~l--~~~i~~~~~l--~e~~~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         280 LAELFDLLASGKL--KPVIDRVYPL--AEAPAAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             HHHHHHHHHcCCC--cceeccEech--hhhHHHHHHHHcccCCcceEEEeC
Confidence            7789999999999  7888899999  885555444333 48899999974

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=3.4e-46  Score=351.77  Aligned_cols=338  Identities=26%  Similarity=0.422  Sum_probs=276.8

Q ss_pred             cceeEEEec-CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccc
Q 017426           17 VNMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (372)
Q Consensus        17 ~~~~~~~~~-~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (372)
                      +||++++.. .+.+++.++|.|.|+++||+|||+++|+|++|+..+.|.++.   ..+|.++|||++|+|+++|+++++|
T Consensus         2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~E~~G~V~~vG~~v~~~   78 (368)
T cd08300           2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPE---GLFPVILGHEGAGIVESVGEGVTSV   78 (368)
T ss_pred             cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCcc---CCCCceeccceeEEEEEeCCCCccC
Confidence            578888764 468999999999999999999999999999999998875421   3578999999999999999999999


Q ss_pred             cccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---cc-----------------CCCCCcceeEEEecCC
Q 017426           96 VPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPVHGSLANQVVHPAD  155 (372)
Q Consensus        96 ~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~g~~~e~~~v~~~  155 (372)
                      ++        ||+|++.+..+|+.|++|..+++++|++....   +.                 ....|+|+||+.++++
T Consensus        79 ~v--------GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~  150 (368)
T cd08300          79 KP--------GDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEI  150 (368)
T ss_pred             CC--------CCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchh
Confidence            99        99999988999999999999999999876421   00                 0024799999999999


Q ss_pred             ceEECCCCCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh
Q 017426          156 LCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI  233 (372)
Q Consensus       156 ~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l  233 (372)
                      .++++|+++++++|+.+. .+.+||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++
T Consensus       151 ~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~l  230 (368)
T cd08300         151 SVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKF  230 (368)
T ss_pred             ceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHc
Confidence            999999999999999876 667899887 558899999999999999999999999999997789999999999999999


Q ss_pred             CCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccC-CEEEEEcCCCCCccccchhh-hccCc
Q 017426          234 GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPLTPA-AVREV  311 (372)
Q Consensus       234 g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~~~~  311 (372)
                      |++.++++.+.++++.+.+++++   ++++|++||++|+...+..++++++++ |+++.+|............+ ..+..
T Consensus       231 Ga~~~i~~~~~~~~~~~~v~~~~---~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  307 (368)
T cd08300         231 GATDCVNPKDHDKPIQQVLVEMT---DGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGR  307 (368)
T ss_pred             CCCEEEcccccchHHHHHHHHHh---CCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcC
Confidence            99988876543335767776654   348999999999877889999999886 99999986532111211111 11233


Q ss_pred             EEEeecc----CCCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          312 DVVGVFR----YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       312 ~i~~~~~----~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      .+.++..    ..++++++++++.+|.+.+.+.++++|++  +++++|++.+.+++. .|++++
T Consensus       308 ~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~l--e~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         308 VWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPL--DEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             eEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcH--HHHHHHHHHHhCCCC-ceeeeC
Confidence            4444432    24678899999999999777789999999  999999999988754 688874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=1.4e-45  Score=345.74  Aligned_cols=340  Identities=36%  Similarity=0.618  Sum_probs=291.0

Q ss_pred             ceeEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccC-C-------cccCCCcccccceeEEEEEec
Q 017426           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA-D-------FVVKEPMVIGHECAGVIEKVG   89 (372)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~-~-------~~~~~p~~~G~e~~G~V~~vG   89 (372)
                      ||++++.+++.+++.++|.|+|.++||+||+.++++|++|+....+.... .       ....+|.++|+|++|+|+++|
T Consensus         1 mka~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   80 (351)
T cd08233           1 MKAARYHGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVG   80 (351)
T ss_pred             CceEEEecCCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeC
Confidence            68888888889999999999999999999999999999998876532100 0       012368899999999999999


Q ss_pred             CCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccc
Q 017426           90 SEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEG  169 (372)
Q Consensus        90 ~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~a  169 (372)
                      +++++|++        ||+|+..+...|++|.+|..+..++|.+..+++....+|+|+||+.++.+.++++|++++++++
T Consensus        81 ~~v~~~~~--------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~a  152 (351)
T cd08233          81 SGVTGFKV--------GDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEA  152 (351)
T ss_pred             CCCCCCCC--------CCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHh
Confidence            99999999        9999999889999999999999999988766554334799999999999999999999999999


Q ss_pred             cccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHH
Q 017426          170 AMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIA  249 (372)
Q Consensus       170 a~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~  249 (372)
                      +++.++.+||+++..+++++|++|||+|+|.+|++++|+|+.+|++.|+++++++++.++++++|++.++++.  ..++.
T Consensus       153 a~~~~~~ta~~~l~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~--~~~~~  230 (351)
T cd08233         153 ALVEPLAVAWHAVRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPT--EVDVV  230 (351)
T ss_pred             hhccHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCC--ccCHH
Confidence            8777888999999778899999999999899999999999999997788888999999999999999887653  35677


Q ss_pred             HHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-CCcHHHHHH
Q 017426          250 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLE  328 (372)
Q Consensus       250 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~  328 (372)
                      +.++++.  .++++|++||++|....++.++++|+++|+++.+|.......++...+..+++++.+...+ .++++++++
T Consensus       231 ~~l~~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~  308 (351)
T cd08233         231 AEVRKLT--GGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVID  308 (351)
T ss_pred             HHHHHHh--CCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHHHH
Confidence            7776654  3457999999999777889999999999999999875544556666677888999988765 678999999


Q ss_pred             HHHcCCCCCCCceEEEecCChHHH-HHHHHHHhcCCCc-eEEEEe
Q 017426          329 LLRSGKIDVKPLVTHRFGFSQKEV-EEAFETSARGGTA-IKVMFN  371 (372)
Q Consensus       329 ll~~g~~~~~~~~~~~~~~~~~~~-~~A~~~~~~~~~~-gkvvv~  371 (372)
                      ++++|.+.+.+.++++|++  +++ ++|++.+.+++.. +|+||.
T Consensus       309 ~~~~g~l~~~~~i~~~~~l--~e~~~~a~~~~~~~~~~~~k~v~~  351 (351)
T cd08233         309 LLASGKIDAEPLITSRIPL--EDIVEKGFEELINDKEQHVKILVS  351 (351)
T ss_pred             HHHcCCCChHHheEEEecH--HHHHHHHHHHHHhCCCCceEEEeC
Confidence            9999999766778899998  996 7899999888764 999873

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=7.9e-46  Score=347.79  Aligned_cols=331  Identities=27%  Similarity=0.400  Sum_probs=265.2

Q ss_pred             ceeEEEecCC-ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      ||++++..++ .+++.++|.|+|+++||+|||+++|+|++|++.+.|.+.......+|.++|||++|+|+++|++ ++|+
T Consensus         1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~   79 (355)
T cd08230           1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS   79 (355)
T ss_pred             CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence            5777776432 3999999999999999999999999999999999886422211245789999999999999999 9999


Q ss_pred             ccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--ccCCCCCcceeEEEecCCceEECCCCCCcccccccch
Q 017426           97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEP  174 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~  174 (372)
                      +        ||||++.+...|++|.+|..+++++|++...+  +....+|+|+||+.++++.++++|++++ ++++...+
T Consensus        80 v--------GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~~a~~~~p  150 (355)
T cd08230          80 P--------GDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-DVGVLLEP  150 (355)
T ss_pred             C--------CCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-cceeecch
Confidence            9        99999988889999999999999999876543  2223579999999999999999999999 55555556


Q ss_pred             hHHHHHHHHh-------cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEec---ChhHHHHHHHhCCCeEEecCCC
Q 017426          175 LSVGVHACRR-------ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV---DDYRLSVAKEIGADNIVKVSTN  244 (372)
Q Consensus       175 ~~~a~~~l~~-------~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~---~~~~~~~~~~lg~~~v~~~~~~  244 (372)
                      +++++.++..       .++++|++|||+|+|++|++++|+|+.+|+ .++++++   +++|.++++++|++. +++.. 
T Consensus       151 ~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~-  227 (355)
T cd08230         151 LSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEELGATY-VNSSK-  227 (355)
T ss_pred             HHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEE-ecCCc-
Confidence            6655544421       236799999999999999999999999999 5777776   688999999999986 34322 


Q ss_pred             cccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC--Ccccc----chhhhccCcEEEeecc
Q 017426          245 LQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVP----LTPAAVREVDVVGVFR  318 (372)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~----~~~~~~~~~~i~~~~~  318 (372)
                       +++.+ . .    ...++|+|||++|++..+..+++.++++|+++.+|....  ...++    ...+..+++++.|+..
T Consensus       228 -~~~~~-~-~----~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~  300 (355)
T cd08230         228 -TPVAE-V-K----LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVN  300 (355)
T ss_pred             -cchhh-h-h----hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecC
Confidence             33332 1 1    135899999999987788999999999999999986544  22333    3456779999999865


Q ss_pred             C-CCcHHHHHHHHHcCCC----CCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          319 Y-KNTWPLCLELLRSGKI----DVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       319 ~-~~~~~~~~~ll~~g~~----~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      . .++++++++++.++..    .+.+.++++|++  +++++|++.+.++.  .|+++++
T Consensus       301 ~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l--~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         301 ANKRHFEQAVEDLAQWKYRWPGVLERLITRRVPL--EEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             CchhhHHHHHHHHHhcccccccchHHheeeeecH--HHHHHHHHhcccCC--eEEEeeC
Confidence            5 5678999999998772    246678999999  99999999887653  5999875

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=3e-45  Score=344.94  Aligned_cols=336  Identities=26%  Similarity=0.456  Sum_probs=280.2

Q ss_pred             cceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccc
Q 017426           17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (372)
Q Consensus        17 ~~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (372)
                      .+|++++.+. ..++++++|.|.|+++||+|||.++++|++|++.+.|...    ..+|.++|||++|+|+++|++++++
T Consensus         2 ~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v~~~   77 (365)
T cd08277           2 KCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA----TLFPVILGHEGAGIVESVGEGVTNL   77 (365)
T ss_pred             ccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC----CCCCeecccceeEEEEeeCCCCccC
Confidence            4788887754 5689999999999999999999999999999999887432    3568899999999999999999999


Q ss_pred             cccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc-------------------CCCCCcceeEEEecCCc
Q 017426           96 VPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-------------------PPVHGSLANQVVHPADL  156 (372)
Q Consensus        96 ~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~g~~~e~~~v~~~~  156 (372)
                      ++        ||+|++.+..+|+.|.+|..+..++|++...+..                   ....|+|+||+.++++.
T Consensus        78 ~~--------GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~  149 (365)
T cd08277          78 KP--------GDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENY  149 (365)
T ss_pred             CC--------CCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhh
Confidence            99        9999998889999999999999999987653311                   01258999999999999


Q ss_pred             eEECCCCCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC
Q 017426          157 CFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG  234 (372)
Q Consensus       157 ~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg  234 (372)
                      ++++|+++++++++.+. .+.+||+++ +.+++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|
T Consensus       150 ~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~g  229 (365)
T cd08277         150 VAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFG  229 (365)
T ss_pred             eEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcC
Confidence            99999999999999877 678899886 5688999999999998999999999999999977889999999999999999


Q ss_pred             CCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccC-CEEEEEcCCCC-CccccchhhhccCcE
Q 017426          235 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHH-EMTVPLTPAAVREVD  312 (372)
Q Consensus       235 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~  312 (372)
                      ++.+++......++.+.++++.   ++++|++||++|+...+..++++++++ |+++.+|.... ..+++...+.. +++
T Consensus       230 a~~~i~~~~~~~~~~~~~~~~~---~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~  305 (365)
T cd08277         230 ATDFINPKDSDKPVSEVIREMT---GGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRT  305 (365)
T ss_pred             CCcEeccccccchHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCE
Confidence            9888765443334566666554   358999999999877888999999875 99999986542 22333334443 678


Q ss_pred             EEeeccC----CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          313 VVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       313 i~~~~~~----~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      +.++..+    ...+++++++++++.+.+.+.++++|++  +++++|++.+.+++ ..|++++
T Consensus       306 i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l--~~~~~A~~~~~~~~-~~k~~i~  365 (365)
T cd08277         306 WKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPF--EEINKGFDLMKSGE-CIRTVIT  365 (365)
T ss_pred             EEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEch--hhHHHHHHHHHCCC-CceEeeC
Confidence            8777543    3468899999999988778889999999  99999999998886 5688874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=2.1e-45  Score=345.84  Aligned_cols=322  Identities=20%  Similarity=0.341  Sum_probs=265.5

Q ss_pred             cCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccccccccCC
Q 017426           25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLV  104 (372)
Q Consensus        25 ~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~gd~v~~~  104 (372)
                      +++.+.+.+++.|.|+++||+|||.++|+|++|++.+.|.+.   ...+|.++|||++|+|+++|++|++|++       
T Consensus        15 ~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~---~~~~p~i~GhE~aG~Vv~vG~~v~~~~v-------   84 (375)
T PLN02178         15 ESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWG---FSRYPIIPGHEIVGIATKVGKNVTKFKE-------   84 (375)
T ss_pred             CCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCC---CCCCCcccCceeeEEEEEECCCCCccCC-------
Confidence            346788889999999999999999999999999999887431   1246889999999999999999999999       


Q ss_pred             CCCEEEEcCCc-CCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCceEECCCCCCcccccccc-hhH
Q 017426          105 PGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLS  176 (372)
Q Consensus       105 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~  176 (372)
                       ||||++.+.. .|++|++|..+++++|++...+.      +...+|+|+||+.++++.++++|+++++++|+.+. ...
T Consensus        85 -GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~  163 (375)
T PLN02178         85 -GDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGI  163 (375)
T ss_pred             -CCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccch
Confidence             9999876554 69999999999999999865321      12236999999999999999999999999998776 556


Q ss_pred             HHHHHHHhcC--CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecC-hhHHHHHHHhCCCeEEecCCCcccHHHHHH
Q 017426          177 VGVHACRRAN--IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD-DYRLSVAKEIGADNIVKVSTNLQDIAEEVE  253 (372)
Q Consensus       177 ~a~~~l~~~~--~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~  253 (372)
                      ++|+++....  .++|++|+|.|+|++|++++|+|+.+|++ +++++.+ +++.++++++|++.++++.+  .   +.++
T Consensus       164 ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~-Vi~~~~~~~~~~~~a~~lGa~~~i~~~~--~---~~v~  237 (375)
T PLN02178        164 TVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLR-VTVISRSSEKEREAIDRLGADSFLVTTD--S---QKMK  237 (375)
T ss_pred             HHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCe-EEEEeCChHHhHHHHHhCCCcEEEcCcC--H---HHHH
Confidence            7888886543  46899999999999999999999999995 6666555 45578889999998876432  1   2344


Q ss_pred             HHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-CCcHHHHHHHHHc
Q 017426          254 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRS  332 (372)
Q Consensus       254 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~~  332 (372)
                      +..    +++|++||++|.+..+..++++++++|+++.+|.......++...+..+++++.|+... .+.+.++++++++
T Consensus       238 ~~~----~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~  313 (375)
T PLN02178        238 EAV----GTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAK  313 (375)
T ss_pred             Hhh----CCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHh
Confidence            332    36999999999877889999999999999999865444455666777889999998765 4678999999999


Q ss_pred             CCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          333 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       333 g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      |++.  +.+ ++|++  +++++|++.+.+++..||+|+++
T Consensus       314 g~i~--~~i-~~~~l--~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        314 HKIV--SDI-ELIKM--SDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             CCCc--ccE-EEEeH--HHHHHHHHHHHcCCCceEEEEEe
Confidence            9994  444 67888  99999999999998889999864

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=3e-45  Score=342.99  Aligned_cols=333  Identities=23%  Similarity=0.432  Sum_probs=276.6

Q ss_pred             EEecCCc-eeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccccccc
Q 017426           22 WLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDR  100 (372)
Q Consensus        22 ~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~gd~  100 (372)
                      ++.+++. ++++++|.|.|+++||+|||.++|+|++|++...+...  ....+|.++|||++|+|+++|++++.+ +   
T Consensus         3 ~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~--~~~~~p~i~GhE~~G~V~~vG~~v~~~-~---   76 (349)
T TIGR03201         3 MMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVR--TNHALPLALGHEISGRVIQAGAGAASW-I---   76 (349)
T ss_pred             eEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCC--ccCCCCeeccccceEEEEEeCCCcCCC-C---
Confidence            4455544 88899999999999999999999999999988643221  113568899999999999999999876 8   


Q ss_pred             ccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCC------CCCcccccccc-
Q 017426          101 VTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD------NVSLEEGAMCE-  173 (372)
Q Consensus       101 v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~------~~~~~~aa~~~-  173 (372)
                           ||+|++.+..+|++|.+|..++.++|.....++. ..+|+|+||+.++++.++++|+      ++++++++.+. 
T Consensus        77 -----GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~-~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~  150 (349)
T TIGR03201        77 -----GKAVIVPAVIPCGECELCKTGRGTICRAQKMPGN-DMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVAD  150 (349)
T ss_pred             -----CCEEEECCCCCCCCChhhhCcCcccCCCCCccCc-CCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcc
Confidence                 9999999999999999999999999987666543 3479999999999999999999      88888887665 


Q ss_pred             hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCc-ccHHHHH
Q 017426          174 PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEV  252 (372)
Q Consensus       174 ~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~  252 (372)
                      .+.++|++++...+++|++|+|+|+|++|++++|+|+.+|+ .++++++++++.++++++|++.++++.... +++.+.+
T Consensus       151 ~~~ta~~a~~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~  229 (349)
T TIGR03201       151 AVTTPYQAAVQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLI  229 (349)
T ss_pred             hHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHH
Confidence            77889999988889999999999999999999999999999 588888999999999999998887653321 2455555


Q ss_pred             HHHHHHcCCcce----EEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-CCcHHHHH
Q 017426          253 EKIQKAMGTGID----VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCL  327 (372)
Q Consensus       253 ~~~~~~~~~~~d----~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~  327 (372)
                      ++++  .+.++|    ++|||+|+...+..++++++++|+++.+|.......++...+..+..++.+.+.. .+++++++
T Consensus       230 ~~~t--~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  307 (349)
T TIGR03201       230 KAFA--KARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAAL  307 (349)
T ss_pred             Hhhc--ccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHH
Confidence            5553  245676    8999999987888899999999999999976544455555666677888887654 56799999


Q ss_pred             HHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          328 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       328 ~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +++++|.+.+.+.++ .|++  +++++|++.+.+++..+|++++.
T Consensus       308 ~~i~~g~i~~~~~i~-~~~l--~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       308 DLVLDGKIQLGPFVE-RRPL--DQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             HHHHcCCCCcccceE-EecH--HHHHHHHHHHHcCCccceEEecC
Confidence            999999996666664 6888  99999999999998889999863

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=4.6e-45  Score=338.51  Aligned_cols=312  Identities=22%  Similarity=0.304  Sum_probs=266.7

Q ss_pred             CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccccccccCCCC
Q 017426           27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPG  106 (372)
Q Consensus        27 ~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~gd~v~~~~G  106 (372)
                      ..+++.++|.|.|+++||+|||.++|+|++|++...|.+..   ..+|.++|||++|+|+++|+++++|++        |
T Consensus        13 ~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~~--------G   81 (329)
T TIGR02822        13 GPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPV---HRPRVTPGHEVVGEVAGRGADAGGFAV--------G   81 (329)
T ss_pred             CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCC---CCCCccCCcceEEEEEEECCCCcccCC--------C
Confidence            46889999999999999999999999999999998875421   234789999999999999999999999        9


Q ss_pred             CEEEEcCC-cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-hhHHHHHHHHh
Q 017426          107 DRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACRR  184 (372)
Q Consensus       107 d~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~  184 (372)
                      |+|++.+. ..|+.|.+|..+++++|+++..++. ..+|+|+||+.+++++++++|+++++++++.+. .+.+||++++.
T Consensus        82 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~  160 (329)
T TIGR02822        82 DRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGW-DTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR  160 (329)
T ss_pred             CEEEEcCccCcCCCChHHhCcCcccCCCcccCCc-ccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHh
Confidence            99987654 4699999999999999998776654 457999999999999999999999999988665 67789999988


Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcce
Q 017426          185 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       185 ~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d  264 (372)
                      +++++|++|||+|+|++|++++|+|+.+|+ .|++++++++|.++++++|++.++++...              ...++|
T Consensus       161 ~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~--------------~~~~~d  225 (329)
T TIGR02822       161 ASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAYDT--------------PPEPLD  225 (329)
T ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecccccc--------------Ccccce
Confidence            889999999999999999999999999999 58888899999999999999988753211              024689


Q ss_pred             EEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC-CccccchhhhccCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceE
Q 017426          265 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVT  342 (372)
Q Consensus       265 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~~g~~~~~~~~~  342 (372)
                      +++++.+..+.+..+++.++++|+++.+|.... ...++...+..+++++.++... .+.+.++++++++|.+.   +++
T Consensus       226 ~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~---~i~  302 (329)
T TIGR02822       226 AAILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVR---VTT  302 (329)
T ss_pred             EEEECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCe---eEE
Confidence            999888877889999999999999999986432 2244555566788888887654 45688899999999983   467


Q ss_pred             EEecCChHHHHHHHHHHhcCCCceEEEE
Q 017426          343 HRFGFSQKEVEEAFETSARGGTAIKVMF  370 (372)
Q Consensus       343 ~~~~~~~~~~~~A~~~~~~~~~~gkvvv  370 (372)
                      ++|++  +++++|++.+.+++..||+|+
T Consensus       303 ~~~~l--~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       303 HTYPL--SEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             EEEeH--HHHHHHHHHHHcCCCceEEEe
Confidence            89999  999999999999999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=1.9e-44  Score=336.20  Aligned_cols=325  Identities=23%  Similarity=0.329  Sum_probs=260.2

Q ss_pred             cceeEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCc-ccCCCcccccceeEEEEEecCCCccc
Q 017426           17 VNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF-VVKEPMVIGHECAGVIEKVGSEVKTL   95 (372)
Q Consensus        17 ~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (372)
                      .++++++++++.+++.++|.|. +++||+|||+++|+|++|++.+.|.+.... ...+|.++|||++|+|+++|.+  +|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~   78 (341)
T cd08237           2 INQVYRLVRPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TY   78 (341)
T ss_pred             cccceEEeccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--cc
Confidence            3578889999999999999995 999999999999999999999988642211 1357999999999999998764  69


Q ss_pred             cccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccchh
Q 017426           96 VPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL  175 (372)
Q Consensus        96 ~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~  175 (372)
                      ++        ||||.+.+...|+ |..|  ...++|.+..+++. ..+|+|+||+.+|+++++++|+++++++|+++.++
T Consensus        79 ~v--------GdrV~~~~~~~~~-~~~~--~~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~~~  146 (341)
T cd08237          79 KV--------GTKVVMVPNTPVE-KDEI--IPENYLPSSRFRSS-GYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTELV  146 (341)
T ss_pred             CC--------CCEEEECCCCCch-hccc--chhccCCCcceeEe-cCCCceEEEEEEchHHeEECCCCCChHHhhhhchH
Confidence            99        9999988877777 4344  35678887665543 34799999999999999999999999999888899


Q ss_pred             HHHHHHHHh---cCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHH
Q 017426          176 SVGVHACRR---ANIGPETNVLIMGAGPIGLVTMLAARA-FGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE  251 (372)
Q Consensus       176 ~~a~~~l~~---~~~~~g~~vlI~Gag~~G~~ai~l~~~-~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~  251 (372)
                      +++|+++..   +.+++|++|||.|+|++|++++|++++ .|+..|++++++++|.+++++.+++..+      .+    
T Consensus       147 ~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~------~~----  216 (341)
T cd08237         147 SVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLI------DD----  216 (341)
T ss_pred             HHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeeh------hh----
Confidence            999998853   457899999999999999999999986 6665788889999999998876654321      11    


Q ss_pred             HHHHHHHcCCcceEEEeCCCc---HHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-CCcHHHHH
Q 017426          252 VEKIQKAMGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCL  327 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~  327 (372)
                         +.+  ..++|+|||++|+   +..+..+++.++++|+++.+|.......++...+..+++++.++... .+++++++
T Consensus       217 ---~~~--~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~  291 (341)
T cd08237         217 ---IPE--DLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAV  291 (341)
T ss_pred             ---hhh--ccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHH
Confidence               111  2369999999994   46789999999999999999975444455666677899999998765 46789999


Q ss_pred             HHHHcC---CCCCCCceEEEecCC-hHHHHHHHHHHhcCCCceEEEEeC
Q 017426          328 ELLRSG---KIDVKPLVTHRFGFS-QKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       328 ~ll~~g---~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ++++++   ...+.+.++++|+++ ++++.+|++...++ ..||+|+++
T Consensus       292 ~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~  339 (341)
T cd08237         292 ELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEW  339 (341)
T ss_pred             HHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEe
Confidence            999999   224578888999872 35667777766655 678999864

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.5e-43  Score=332.11  Aligned_cols=330  Identities=20%  Similarity=0.300  Sum_probs=269.4

Q ss_pred             cceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccc
Q 017426           17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (372)
Q Consensus        17 ~~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (372)
                      .+++++++++ ..+++.+++.|+|+++||+|||.++++|++|++.+.|....   ..+|.++|||++|+|+++|+++++|
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~E~~G~Vv~vG~~v~~~   85 (357)
T PLN02514          9 KTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM---SNYPMVPGHEVVGEVVEVGSDVSKF   85 (357)
T ss_pred             eEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc---CCCCccCCceeeEEEEEECCCcccc
Confidence            3678888866 57999999999999999999999999999999988774321   2468899999999999999999999


Q ss_pred             cccccccCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCceEECCCCCCccc
Q 017426           96 VPGDRVTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEE  168 (372)
Q Consensus        96 ~~gd~v~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~  168 (372)
                      ++        ||+|++.+. ..|++|++|..+..++|.+..+..      +...+|+|+||+.++.+.++++|+++++++
T Consensus        86 ~~--------Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~  157 (357)
T PLN02514         86 TV--------GDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQ  157 (357)
T ss_pred             cC--------CCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHH
Confidence            99        999976543 369999999999999998753211      112469999999999999999999999999


Q ss_pred             ccccc-hhHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHH-HHHHHhCCCeEEecCCCc
Q 017426          169 GAMCE-PLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRL-SVAKEIGADNIVKVSTNL  245 (372)
Q Consensus       169 aa~~~-~~~~a~~~l~~-~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~-~~~~~lg~~~v~~~~~~~  245 (372)
                      |+.++ .+.+||+++.. ...++|++++|+|+|++|++++|+|+.+|++ ++++..++++. ..++++|++.+++..+  
T Consensus       158 aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~-vi~~~~~~~~~~~~~~~~Ga~~~i~~~~--  234 (357)
T PLN02514        158 AAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHH-VTVISSSDKKREEALEHLGADDYLVSSD--  234 (357)
T ss_pred             hhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHhcCCcEEecCCC--
Confidence            98776 56789998865 5568999999998899999999999999995 56665666555 4557799987665322  


Q ss_pred             ccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-CCcHH
Q 017426          246 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWP  324 (372)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~  324 (372)
                      .   +.+++.    ..++|++||++|....+..++++++++|+++.+|.......+....+..+++++.++... ..+++
T Consensus       235 ~---~~~~~~----~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~  307 (357)
T PLN02514        235 A---AEMQEA----ADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETE  307 (357)
T ss_pred             h---HHHHHh----cCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHH
Confidence            1   233333    247999999999877889999999999999999975544456666677889999998765 45789


Q ss_pred             HHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          325 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       325 ~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ++++++++|.+  .+.+ ++|++  +++++|++.+.+++..+|+++.+
T Consensus       308 ~~~~~~~~g~l--~~~i-~~~~l--~~~~~A~~~~~~~~~~gk~v~~~  350 (357)
T PLN02514        308 EMLEFCKEKGL--TSMI-EVVKM--DYVNTAFERLEKNDVRYRFVVDV  350 (357)
T ss_pred             HHHHHHHhCCC--cCcE-EEEcH--HHHHHHHHHHHcCCCceeEEEEc
Confidence            99999999987  5555 57888  99999999999998889999864

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=5.1e-43  Score=326.92  Aligned_cols=335  Identities=28%  Similarity=0.478  Sum_probs=280.1

Q ss_pred             ceeEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccc
Q 017426           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (372)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (372)
                      ||++++.+++.+++.++|.|.|+++|++||+.++++|++|+....|.+..   ..+|.++|||++|+|+++|++|++|++
T Consensus         1 m~a~~~~~~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~~   77 (339)
T PRK10083          1 MKSIVIEKPNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPF---AKYPRVIGHEFFGVIDAVGEGVDAARI   77 (339)
T ss_pred             CeEEEEecCCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCc---CCCCcccccceEEEEEEECCCCccCCC
Confidence            58888888899999999999999999999999999999999988775321   246889999999999999999999999


Q ss_pred             cccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccchhHH
Q 017426           98 GDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV  177 (372)
Q Consensus        98 gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~~  177 (372)
                              ||+|++.+..+|+.|.+|..+++++|.++..++. ..+|+|+||+.++.+.++++|+++++.+++...++.+
T Consensus        78 --------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~~~~~~~~  148 (339)
T PRK10083         78 --------GERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGV-HRDGGFSEYAVVPAKNAHRIPDAIADQYAVMVEPFTI  148 (339)
T ss_pred             --------CCEEEEccccCCCCCccccCcCcccCCCCceEEE-ccCCcceeeEEechHHeEECcCCCCHHHHhhhchHHH
Confidence                    9999999999999999999999999988766543 3479999999999999999999999988876667778


Q ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHH
Q 017426          178 GVHACRRANIGPETNVLIMGAGPIGLVTMLAARA-FGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       178 a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~-~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~  256 (372)
                      ++.+++.+++++|++|||+|+|.+|++++|+|+. +|+..++++++++++.++++++|++.++++.+  .++.+.+..  
T Consensus       149 a~~~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~~~~~~~~--  224 (339)
T PRK10083        149 AANVTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ--EPLGEALEE--  224 (339)
T ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHhc--
Confidence            8876677899999999999999999999999997 69987888999999999999999988876533  445544422  


Q ss_pred             HHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccCCCcHHHHHHHHHcCCCC
Q 017426          257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKID  336 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ll~~g~~~  336 (372)
                        .+.++|++||++|++..+..++++|+++|+++.+|.......+....+..+.+++.+.....+.+++++++++++.+.
T Consensus       225 --~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~  302 (339)
T PRK10083        225 --KGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRLNANKFPVVIDWLSKGLID  302 (339)
T ss_pred             --CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEecChhhHHHHHHHHHcCCCC
Confidence              134567999999977788999999999999999986543223333344457777777655567899999999999985


Q ss_pred             CCCceEEEecCChHHHHHHHHHHhcC-CCceEEEEeC
Q 017426          337 VKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFNL  372 (372)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~A~~~~~~~-~~~gkvvv~~  372 (372)
                      +...++++|++  +++++|++.+.++ ...+|+++++
T Consensus       303 ~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~kvvv~~  337 (339)
T PRK10083        303 PEKLITHTFDF--QHVADAIELFEKDQRHCCKVLLTF  337 (339)
T ss_pred             hHHheeeeecH--HHHHHHHHHHhcCCCceEEEEEec
Confidence            44457788988  9999999998865 4568999864

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=5.5e-44  Score=298.87  Aligned_cols=308  Identities=27%  Similarity=0.366  Sum_probs=264.9

Q ss_pred             hhcceeEEEe---cCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCC
Q 017426           15 EEVNMAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (372)
Q Consensus        15 ~~~~~~~~~~---~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (372)
                      |+..|.++++   +.+.+++++.|.|+|.|+|++||..|+|+|.-|.-..+|.+..   ...|++||.|.+|+|+++|++
T Consensus         6 p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~---~plPytpGmEaaGvVvAvG~g   82 (336)
T KOG1197|consen    6 PPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDP---APLPYTPGMEAAGVVVAVGEG   82 (336)
T ss_pred             CchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCC---CCCCcCCCcccceEEEEecCC
Confidence            4446787777   5689999999999999999999999999999999999987742   467999999999999999999


Q ss_pred             CccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccc
Q 017426           92 VKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAM  171 (372)
Q Consensus        92 v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~  171 (372)
                      |++|++        ||||+.                            .+.+|.|+|+..+|...+.++|+.+++.+|+.
T Consensus        83 vtdrkv--------GDrVay----------------------------l~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa  126 (336)
T KOG1197|consen   83 VTDRKV--------GDRVAY----------------------------LNPFGAYAEEVTVPSVKVFKVPEAITLKEAAA  126 (336)
T ss_pred             cccccc--------ccEEEE----------------------------eccchhhheeccccceeeccCCcccCHHHHHH
Confidence            999999        888864                            24689999999999999999999999999997


Q ss_pred             cc-hhHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccH
Q 017426          172 CE-PLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI  248 (372)
Q Consensus       172 ~~-~~~~a~~~l~~-~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~  248 (372)
                      +. ...|||..+++ .+++||++||||.| |++|++++|++|..|+ .+|.+.+.+++++.+++-|+.+.|+|+.  +|+
T Consensus       127 ~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~--eD~  203 (336)
T KOG1197|consen  127 LLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPIDYST--EDY  203 (336)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcceeeccc--hhH
Confidence            65 67789988866 78999999999965 9999999999999999 6888889999999999999999998754  899


Q ss_pred             HHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-ccccchhhhccCcEEEeecc--C---CCc
Q 017426          249 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFR--Y---KNT  322 (372)
Q Consensus       249 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~--~---~~~  322 (372)
                      .+.+.+++  ++.++|+++|.+|. +.+..++++|++.|.++.+|..... .++++..++.+.+++.....  +   +..
T Consensus       204 v~~V~kiT--ngKGVd~vyDsvG~-dt~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~e  280 (336)
T KOG1197|consen  204 VDEVKKIT--NGKGVDAVYDSVGK-DTFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVE  280 (336)
T ss_pred             HHHHHhcc--CCCCceeeeccccc-hhhHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHH
Confidence            99998886  48899999999997 5999999999999999999987654 35666767666665443322  2   222


Q ss_pred             ----HHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          323 ----WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       323 ----~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                          ..+++.++.+|.+  .+.+.++|++  +++.+|+..+++....||+++.
T Consensus       281 l~~~v~rl~alvnsg~l--k~~I~~~ypl--s~vadA~~diesrktvGkvlLl  329 (336)
T KOG1197|consen  281 LVSYVARLFALVNSGHL--KIHIDHVYPL--SKVADAHADIESRKTVGKVLLL  329 (336)
T ss_pred             HHHHHHHHHHHhhcCcc--ceeeeeecch--HHHHHHHHHHHhhhccceEEEe
Confidence                3467777888988  8889999999  9999999999999999999874

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=2.2e-43  Score=324.37  Aligned_cols=306  Identities=21%  Similarity=0.301  Sum_probs=248.1

Q ss_pred             cceeEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeC-cccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccc
Q 017426           17 VNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGIC-GSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (372)
Q Consensus        17 ~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~-~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (372)
                      ++|++++.+++.+++.+.|.|.|+++||+|||+++|+| .+|+..+.|.+.......+|.++|||++|+|+++|+++ +|
T Consensus         1 ~~ka~~~~~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~   79 (308)
T TIGR01202         1 KTQAIVLSGPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GF   79 (308)
T ss_pred             CceEEEEeCCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-CC
Confidence            36888898889999999999999999999999999997 69998888754322113579999999999999999998 69


Q ss_pred             cccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccchh
Q 017426           96 VPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL  175 (372)
Q Consensus        96 ~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~  175 (372)
                      ++        ||||++.+    ..|.+|..               ...|+|+||+.+|++.++++|++++++. +.+.+.
T Consensus        80 ~v--------GdrV~~~~----~~c~~~~~---------------~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~~~  131 (308)
T TIGR01202        80 RP--------GDRVFVPG----SNCYEDVR---------------GLFGGASKRLVTPASRVCRLDPALGPQG-ALLALA  131 (308)
T ss_pred             CC--------CCEEEEeC----cccccccc---------------ccCCcccceEEcCHHHceeCCCCCCHHH-HhhhHH
Confidence            99        88888632    23333211               1259999999999999999999999764 555667


Q ss_pred             HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHH
Q 017426          176 SVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI  255 (372)
Q Consensus       176 ~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~  255 (372)
                      ++||++++... .+++++||+|+|++|++++|+|+.+|++.+++++.+++|.+.+.++   .+++++.   +        
T Consensus       132 ~~a~~~~~~~~-~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~---~--------  196 (308)
T TIGR01202       132 ATARHAVAGAE-VKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEK---D--------  196 (308)
T ss_pred             HHHHHHHHhcc-cCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhh---c--------
Confidence            89999997653 3689999999999999999999999998777787877777766543   2332211   0        


Q ss_pred             HHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-CCcHHHHHHHHHcCC
Q 017426          256 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGK  334 (372)
Q Consensus       256 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~~g~  334 (372)
                         .+.++|++|||+|++..++.+++.++++|+++.+|.......++...+..+.+++.++..+ .++++++++++++|.
T Consensus       197 ---~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~  273 (308)
T TIGR01202       197 ---PRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGA  273 (308)
T ss_pred             ---cCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCC
Confidence               1457999999999977889999999999999999976544556666777888898887665 567999999999999


Q ss_pred             CCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          335 IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      +.+.+.++++|++  +++++|++.+.++...+|++++
T Consensus       274 i~~~~~it~~~~l--~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       274 LSLDGLITHQRPA--SDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             CChhhccceeecH--HHHHHHHHHHhcCcCceEEEeC
Confidence            9877889999999  9999999988777677999874

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=2.1e-42  Score=325.53  Aligned_cols=337  Identities=31%  Similarity=0.518  Sum_probs=279.8

Q ss_pred             eeEEEecCC-ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc---
Q 017426           19 MAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT---   94 (372)
Q Consensus        19 ~~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~---   94 (372)
                      |++++.+++ .+++.+++.|.|+++||+|||.++++|+.|+....|.+..   ..+|.++|+|++|+|+++|++|++   
T Consensus         2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~~   78 (361)
T cd08231           2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR---VPLPIILGHEGVGRVVALGGGVTTDVA   78 (361)
T ss_pred             eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC---CCCCcccccCCceEEEEeCCCcccccc
Confidence            677787665 8999999999999999999999999999999998875421   356889999999999999999986   


Q ss_pred             ---ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC------CCCCcceeEEEecCC-ceEECCCCC
Q 017426           95 ---LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------PVHGSLANQVVHPAD-LCFKLPDNV  164 (372)
Q Consensus        95 ---~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~e~~~v~~~-~~~~~P~~~  164 (372)
                         |++        ||+|+..+..+|++|.+|..++.++|+....++..      ...|+|+||+.++++ +++++|+++
T Consensus        79 ~~~~~~--------Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~  150 (361)
T cd08231          79 GEPLKV--------GDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNV  150 (361)
T ss_pred             CCccCC--------CCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCC
Confidence               999        99999999999999999999999999887666542      246999999999996 799999999


Q ss_pred             Cccccccc-chhHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecC
Q 017426          165 SLEEGAMC-EPLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  242 (372)
Q Consensus       165 ~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~  242 (372)
                      ++.+|+++ .++.|||++++. ...++|++|||+|+|.+|++++|+|+.+|++.++++++++++.++++++|++.++++.
T Consensus       151 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~  230 (361)
T cd08231         151 PDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDID  230 (361)
T ss_pred             CHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCc
Confidence            98888887 478899999976 4456999999998899999999999999996688888899999999999998887654


Q ss_pred             CCc-ccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC--ccccchhhhccCcEEEeeccC
Q 017426          243 TNL-QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGVFRY  319 (372)
Q Consensus       243 ~~~-~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~  319 (372)
                      ... .++...+.++.  .+.++|++||++|+...+..++++++++|+++.+|.....  ..+....+..+++++.++...
T Consensus       231 ~~~~~~~~~~i~~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (361)
T cd08231         231 ELPDPQRRAIVRDIT--GGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNY  308 (361)
T ss_pred             ccccHHHHHHHHHHh--CCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccC
Confidence            321 11223454443  3568999999998866788999999999999999865422  233334467888998888765


Q ss_pred             -CCcHHHHHHHHHcC--CCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          320 -KNTWPLCLELLRSG--KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       320 -~~~~~~~~~ll~~g--~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                       .+.++++++++.++  .+.+.+.++++|++  +++++|++.+.++. .+|++|+
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l--~~~~~a~~~~~~~~-~~k~vi~  360 (361)
T cd08231         309 DPSHLYRAVRFLERTQDRFPFAELVTHRYPL--EDINEALELAESGT-ALKVVID  360 (361)
T ss_pred             CchhHHHHHHHHHhccCcCCchhheeeeeeH--HHHHHHHHHHHcCC-ceEEEeC
Confidence             56789999999988  55556778899999  99999999998875 5899986

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=3.9e-42  Score=328.16  Aligned_cols=331  Identities=24%  Similarity=0.361  Sum_probs=265.4

Q ss_pred             hcceeEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhh-hhcccCC---cccCCCcccccceeEEEEEecCC
Q 017426           16 EVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL-KTLRCAD---FVVKEPMVIGHECAGVIEKVGSE   91 (372)
Q Consensus        16 ~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~-~g~~~~~---~~~~~p~~~G~e~~G~V~~vG~~   91 (372)
                      +.||++++.++..+++.++|.|.|+++||+|||.++|+|++|++.+ .|.....   ....+|.++|||++|+|+++|++
T Consensus         1 m~~~a~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~   80 (410)
T cd08238           1 MKTKAWRMYGKGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKK   80 (410)
T ss_pred             CCcEEEEEEcCCceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCC
Confidence            3588999999989999999999999999999999999999999976 3431111   01246889999999999999999


Q ss_pred             Cc-cccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC----ceEECCCCCCc
Q 017426           92 VK-TLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD----LCFKLPDNVSL  166 (372)
Q Consensus        92 v~-~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~----~~~~~P~~~~~  166 (372)
                      |+ +|++        ||||++.+...|+.|.+|.. .          + ...+|+|+||+.++++    .++++|+++++
T Consensus        81 v~~~~~v--------GdrV~~~~~~~c~~~~~c~~-~----------g-~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~  140 (410)
T cd08238          81 WQGKYKP--------GQRFVIQPALILPDGPSCPG-Y----------S-YTYPGGLATYHIIPNEVMEQDCLLIYEGDGY  140 (410)
T ss_pred             ccCCCCC--------CCEEEEcCCcCCCCCCCCCC-c----------c-ccCCCcceEEEEecHHhccCCeEECCCCCCH
Confidence            98 6999        99999988888998887731 1          1 1247999999999987    68999999999


Q ss_pred             ccccccchhHHH---HHHH---------HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcC--CCeEEEEecChhHHHHHH
Q 017426          167 EEGAMCEPLSVG---VHAC---------RRANIGPETNVLIMGA-GPIGLVTMLAARAFG--APRIVIVDVDDYRLSVAK  231 (372)
Q Consensus       167 ~~aa~~~~~~~a---~~~l---------~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g--~~~vv~v~~~~~~~~~~~  231 (372)
                      ++|+++.+++++   +.++         +.+++++|++|+|+|+ |++|++++|+|+.+|  +..|++++++++|.++++
T Consensus       141 ~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~  220 (410)
T cd08238         141 AEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQ  220 (410)
T ss_pred             HHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHH
Confidence            999876554433   3332         3477899999999985 999999999999975  456889999999999999


Q ss_pred             Hh--------CCC-eEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCC-CC--Cc
Q 017426          232 EI--------GAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG-HH--EM  299 (372)
Q Consensus       232 ~l--------g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~--~~  299 (372)
                      ++        |++ .++++.. ..++.+.+++++  .+.++|++||++|.+..+..++++++++|+++.++.. ..  ..
T Consensus       221 ~~~~~~~~~~Ga~~~~i~~~~-~~~~~~~v~~~t--~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~  297 (410)
T cd08238         221 RLFPPEAASRGIELLYVNPAT-IDDLHATLMELT--GGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSA  297 (410)
T ss_pred             HhccccccccCceEEEECCCc-cccHHHHHHHHh--CCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccc
Confidence            97        665 3444321 245666666654  3568999999999888999999999999988776432 22  23


Q ss_pred             cccchhhhccCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          300 TVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       300 ~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      .++...+..+++++.|+... .++++++++++++|++.+.+.++++|++  +++++|++.+. ++..||+|+..
T Consensus       298 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l--~~~~~A~~~~~-~~~~gKvvl~~  368 (410)
T cd08238         298 PLNFYNVHYNNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGL--NAAAETTLNLP-GIPGGKKLIYT  368 (410)
T ss_pred             cccHHHhhhcCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecH--HHHHHHHHHhh-ccCCceEEEEC
Confidence            45566778899999998764 5678999999999999877789999999  99999999998 66789999863

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=6.9e-42  Score=320.78  Aligned_cols=338  Identities=30%  Similarity=0.399  Sum_probs=277.0

Q ss_pred             ceeEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccc
Q 017426           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (372)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (372)
                      ||++++.+++.+.+.+.+.|.+.++||+|||.++++|++|++...+.+..   ...|.++|+|++|+|+++|+++++|++
T Consensus         1 mka~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~---~~~~~~~G~e~~G~V~~vG~~v~~~~~   77 (351)
T cd08285           1 MKAFAMLGIGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG---ERHGMILGHEAVGVVEEVGSEVKDFKP   77 (351)
T ss_pred             CceEEEccCCccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC---CCCCcccCcceEEEEEEecCCcCccCC
Confidence            68999998888999999999999999999999999999999887764321   355889999999999999999999999


Q ss_pred             cccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--ccCCCCCcceeEEEecCC--ceEECCCCCCcccccccc
Q 017426           98 GDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE  173 (372)
Q Consensus        98 gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~e~~~v~~~--~~~~~P~~~~~~~aa~~~  173 (372)
                              ||+|+..+..+|++|.+|..++.++|......  ......|+|+||+.++.+  .++++|+++++.+++.++
T Consensus        78 --------Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~  149 (351)
T cd08285          78 --------GDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLP  149 (351)
T ss_pred             --------CCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhc
Confidence                    99999887789999999999999999865311  112346999999999974  899999999999998775


Q ss_pred             -hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHH
Q 017426          174 -PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV  252 (372)
Q Consensus       174 -~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~  252 (372)
                       ++.+|+++++.+++++|++|||+|+|.+|++++|+|+.+|+..++++++++++.++++++|++.++++..  .++.+.+
T Consensus       150 ~~~~ta~~~~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i  227 (351)
T cd08285         150 DMMSTGFHGAELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN--GDVVEQI  227 (351)
T ss_pred             cchhhHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCC--CCHHHHH
Confidence             7788999987788999999999988999999999999999977889999999999999999988876543  5666666


Q ss_pred             HHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCc--cccchh--hhccCcEEEeeccC--CCcHHHH
Q 017426          253 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM--TVPLTP--AAVREVDVVGVFRY--KNTWPLC  326 (372)
Q Consensus       253 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~--~~~~~~~i~~~~~~--~~~~~~~  326 (372)
                      .++.  .+.++|++||++|+++.+..++++|+++|+++.++......  .++...  ...+..++.+....  .+.++++
T Consensus       228 ~~~~--~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  305 (351)
T cd08285         228 LKLT--GGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERL  305 (351)
T ss_pred             HHHh--CCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHH
Confidence            6554  35679999999998778899999999999999998654321  222111  22345556554432  5689999


Q ss_pred             HHHHHcCCCCCCC-ceEEEecCChHHHHHHHHHHhcCC-CceEEEEeC
Q 017426          327 LELLRSGKIDVKP-LVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL  372 (372)
Q Consensus       327 ~~ll~~g~~~~~~-~~~~~~~~~~~~~~~A~~~~~~~~-~~gkvvv~~  372 (372)
                      ++++++|++.+.. ...+.+++  +++++|++.+.+++ ...|+++++
T Consensus       306 ~~~~~~g~i~~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         306 ASLIEYGRVDPSKLLTHHFFGF--DDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             HHHHHcCCCChhhceeccccCH--HHHHHHHHHHhcccCCeEEEEEeC
Confidence            9999999986532 34455788  99999999998886 478999875

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.2e-41  Score=319.10  Aligned_cols=339  Identities=30%  Similarity=0.568  Sum_probs=281.7

Q ss_pred             ceeEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccC--C----cccCCCcccccceeEEEEEecCC
Q 017426           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA--D----FVVKEPMVIGHECAGVIEKVGSE   91 (372)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~--~----~~~~~p~~~G~e~~G~V~~vG~~   91 (372)
                      ||++++++++.+++.+.+.|++.++||+||+.++++|+.|+....|....  .    ...++|.++|+|++|+|+++|++
T Consensus         1 mka~~~~~~~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~   80 (350)
T cd08256           1 MRAVVCHGPQDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEG   80 (350)
T ss_pred             CeeEEEecCCceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCCC
Confidence            68899998889999999999999999999999999999999988764210  0    00145778999999999999999


Q ss_pred             Cc--cccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc-CCCCCcceeEEEecCC-ceEECCCCCCcc
Q 017426           92 VK--TLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-PPVHGSLANQVVHPAD-LCFKLPDNVSLE  167 (372)
Q Consensus        92 v~--~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~e~~~v~~~-~~~~~P~~~~~~  167 (372)
                      |+  +|++        ||+|+..+..+|+.|++|..+..+.|+...+++. ....|+|++|+.++++ .++++|+++++.
T Consensus        81 v~~~~~~~--------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~  152 (350)
T cd08256          81 AEERGVKV--------GDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPE  152 (350)
T ss_pred             cccCCCCC--------CCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHH
Confidence            99  8999        9999999999999999999999999987654443 1246999999999988 678999999999


Q ss_pred             cccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCccc
Q 017426          168 EGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD  247 (372)
Q Consensus       168 ~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~  247 (372)
                      +++.+.++.++|.+++.+++++|++|||.|+|.+|++++++|+++|+.+++++++++++.++++++|++.++++.  ..+
T Consensus       153 ~aa~~~~~~ta~~a~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~--~~~  230 (350)
T cd08256         153 DAILIEPLACALHAVDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPP--EVD  230 (350)
T ss_pred             HHhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCC--CcC
Confidence            888777888999998778899999999977799999999999999998888898999999999999998776543  356


Q ss_pred             HHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhh-hccCcEEEeeccCCCcHHHH
Q 017426          248 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPA-AVREVDVVGVFRYKNTWPLC  326 (372)
Q Consensus       248 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~  326 (372)
                      +.+.+.++.  .+.++|++||++|+...+..++++++++|+++.++.......+....+ ..+++++.++......+.++
T Consensus       231 ~~~~~~~~~--~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  308 (350)
T cd08256         231 VVEKIKELT--GGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCYPIA  308 (350)
T ss_pred             HHHHHHHHh--CCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCchhHHHH
Confidence            666666653  345799999999976678889999999999999985433333333333 34667777776656678999


Q ss_pred             HHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEE
Q 017426          327 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  370 (372)
Q Consensus       327 ~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv  370 (372)
                      +++++++.+.+.+.+.+.|++  +++++|++.+.+++..+|+++
T Consensus       309 ~~~~~~g~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         309 IDLIASGRLPTDGIVTHQFPL--EDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             HHHHHcCCCChhHheEEEeEH--HHHHHHHHHHHhCCCceEEeC
Confidence            999999999544447888998  999999999999988889874

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=2.4e-41  Score=316.14  Aligned_cols=338  Identities=57%  Similarity=0.984  Sum_probs=280.2

Q ss_pred             eEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccccc
Q 017426           20 AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD   99 (372)
Q Consensus        20 ~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~gd   99 (372)
                      +.++++++.+.+.+.|.|.|.++||+|+|.++++|+.|+..+.+...+.....+|.++|+|++|+|+++|+++++|++  
T Consensus         1 ~~~~~~~~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~--   78 (343)
T cd05285           1 AAVLHGPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKV--   78 (343)
T ss_pred             CceEecCCceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCC--
Confidence            356778889999999999999999999999999999999876432111111245778999999999999999999999  


Q ss_pred             cccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccchhHHHH
Q 017426          100 RVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV  179 (372)
Q Consensus       100 ~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~~a~  179 (372)
                            ||+|++.+..+|++|++|..+..++|++...++.....|+|++|+.+++++++++|+++++.+|+.+.++.+|+
T Consensus        79 ------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~  152 (343)
T cd05285          79 ------GDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGV  152 (343)
T ss_pred             ------CCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhhhHHHHHH
Confidence                  99999999999999999999999999876444433457999999999999999999999999998777788899


Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCccc---HHHHHHHHH
Q 017426          180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD---IAEEVEKIQ  256 (372)
Q Consensus       180 ~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~---~~~~~~~~~  256 (372)
                      ++++.+++++|+++||+|+|.+|++++|+|+.+|++.++++.+++++.++++++|++.+++++.  .+   |.+.+.++.
T Consensus       153 ~~~~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~~~~~~~~  230 (343)
T cd05285         153 HACRRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT--EDTPESAEKIAELL  230 (343)
T ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc--ccchhHHHHHHHHh
Confidence            8887799999999999988999999999999999965788888899999999999998876543  33   355565543


Q ss_pred             HHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccCCCcHHHHHHHHHcCCCC
Q 017426          257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKID  336 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ll~~g~~~  336 (372)
                        .+.++|++|||.|+...+...+++++++|+++.++.......++...+..+.+++.+.....+.+++++++++++.+.
T Consensus       231 --~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~  308 (343)
T cd05285         231 --GGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYANTYPTAIELLASGKVD  308 (343)
T ss_pred             --CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccChHHHHHHHHHHHcCCCC
Confidence              356799999999986688899999999999999986543334444466778888888766667889999999999875


Q ss_pred             CCCceEEEecCChHHHHHHHHHHhcCC-CceEEEEe
Q 017426          337 VKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVMFN  371 (372)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~A~~~~~~~~-~~gkvvv~  371 (372)
                      +.+.+.++|++  +++.+|++.+.+++ ..+|++|.
T Consensus       309 ~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~  342 (343)
T cd05285         309 VKPLITHRFPL--EDAVEAFETAAKGKKGVIKVVIE  342 (343)
T ss_pred             chHhEEEEEeH--HHHHHHHHHHHcCCCCeeEEEEe
Confidence            44557788888  99999999998874 45899874

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=3.4e-41  Score=317.94  Aligned_cols=339  Identities=26%  Similarity=0.415  Sum_probs=274.5

Q ss_pred             hcceeEEEec-CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           16 EVNMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        16 ~~~~~~~~~~-~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      .+||++++.. ++.++++++|.|.|.++||+|||.++|+|++|++...|..    ...+|.++|||++|+|+++|++++.
T Consensus         6 ~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~----~~~~p~v~G~e~~G~V~~vG~~v~~   81 (373)
T cd08299           6 IKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKL----VTPFPVILGHEAAGIVESVGEGVTT   81 (373)
T ss_pred             ceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCC----CCCCCccccccceEEEEEeCCCCcc
Confidence            3478888775 4678999999999999999999999999999999988754    1356889999999999999999999


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc--------------------CCCCCcceeEEEecC
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------------------PPVHGSLANQVVHPA  154 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~e~~~v~~  154 (372)
                      |++        ||+|++.+..+|+.|++|..++++.|+.....+.                    ....|+|+||+.+++
T Consensus        82 ~~~--------Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~  153 (373)
T cd08299          82 VKP--------GDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDE  153 (373)
T ss_pred             CCC--------CCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecc
Confidence            999        9999998889999999999999999987654310                    003589999999999


Q ss_pred             CceEECCCCCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH
Q 017426          155 DLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE  232 (372)
Q Consensus       155 ~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~  232 (372)
                      ++++++|+++++.+++++. .+.+||+++ ..+++++|++|||+|+|++|++++++|+.+|+..|+++++++++.+.+++
T Consensus       154 ~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~  233 (373)
T cd08299         154 IAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKE  233 (373)
T ss_pred             cceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence            9999999999999999877 778899886 56889999999999889999999999999999668888899999999999


Q ss_pred             hCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHh-ccCCEEEEEcCCCCCccccchh-hhccC
Q 017426          233 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGAT-CAGGKVCLVGMGHHEMTVPLTP-AAVRE  310 (372)
Q Consensus       233 lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~-~~~~~  310 (372)
                      +|++.++++.+.+.++.+.+.++.   .+++|++||++|++..+..++..+ +++|+++.+|.......+.... ...++
T Consensus       234 lGa~~~i~~~~~~~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~  310 (373)
T cd08299         234 LGATECINPQDYKKPIQEVLTEMT---DGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTG  310 (373)
T ss_pred             cCCceEecccccchhHHHHHHHHh---CCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHHhcC
Confidence            999888765433334566666554   357999999999766777767655 5789999998654322222222 23456


Q ss_pred             cEEEeeccC----CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          311 VDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       311 ~~i~~~~~~----~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      .++.++...    .+.+.++++.+.++.+.+.+.++++|++  +++++|++.+.+++. .|+++++
T Consensus       311 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~e~~~a~~~~~~~~~-~k~~~~~  373 (373)
T cd08299         311 RTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPF--EKINEGFDLLRSGKS-IRTVLTF  373 (373)
T ss_pred             CeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecH--HHHHHHHHHHhCCCc-ceEEEeC
Confidence            677776543    2467778888887777666678899999  999999999887754 5888764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.8e-41  Score=314.38  Aligned_cols=329  Identities=24%  Similarity=0.385  Sum_probs=278.5

Q ss_pred             ceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      ||++++.++ ..+++.++|.|.+.++||+||+.++++|++|+....|....   ...|.++|+|++|+|+++|+++++|+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~p~~~g~e~~G~v~~vG~~v~~~~   77 (333)
T cd08296           1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG---LSYPRVPGHEVVGRIDAVGEGVSRWK   77 (333)
T ss_pred             CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC---CCCCcccCcceeEEEEEECCCCccCC
Confidence            688898877 68999999999999999999999999999999988774321   24578999999999999999999999


Q ss_pred             ccccccCCCCCEEEEcC-CcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-h
Q 017426           97 PGDRVTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-P  174 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~  174 (372)
                      +        ||+|++.+ ...|++|.+|..++.+.|.+....+. ..+|+|++|+.++++.++++|+++++.+++.++ .
T Consensus        78 ~--------Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~-~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~  148 (333)
T cd08296          78 V--------GDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGV-TRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCA  148 (333)
T ss_pred             C--------CCEEEeccccCCCCCChhhhCcCcccCCCCCccCc-ccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhh
Confidence            9        99987753 46799999999999999998765543 346999999999999999999999999888765 6


Q ss_pred             hHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHH
Q 017426          175 LSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       175 ~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~  254 (372)
                      +.+||++++..+++++++|||+|+|.+|++++|+|+.+|+ .++++++++++.++++++|++.++++.  ..++.+.+++
T Consensus       149 ~~ta~~~~~~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~--~~~~~~~~~~  225 (333)
T cd08296         149 GVTTFNALRNSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTS--KEDVAEALQE  225 (333)
T ss_pred             hHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCC--CccHHHHHHh
Confidence            6788999877789999999999999999999999999999 478888899999999999998877643  3456555544


Q ss_pred             HHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-CCcHHHHHHHHHcC
Q 017426          255 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG  333 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~~g  333 (372)
                      +     .++|++||+.|....+..++++++++|+++.+|......+++...+..+++++.+.... .+.++.++++++++
T Consensus       226 ~-----~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  300 (333)
T cd08296         226 L-----GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALH  300 (333)
T ss_pred             c-----CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhC
Confidence            3     46999999987667889999999999999999876544455555667889999987654 56788899999888


Q ss_pred             CCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          334 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      .+  .+.+ +.|++  +++.+|++.+.+++.+||+|++
T Consensus       301 ~l--~~~v-~~~~~--~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         301 GV--RPMV-ETFPL--EKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             CC--CceE-EEEEH--HHHHHHHHHHHCCCCceeEEeC
Confidence            87  4444 67888  9999999999999899999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=1.3e-40  Score=310.84  Aligned_cols=334  Identities=28%  Similarity=0.491  Sum_probs=280.4

Q ss_pred             ceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      ||+++++++ ..+.+.+.+.|.+.++||+||+.++++|++|+....|.+.......+|.++|+|++|+|+++|+++.+|+
T Consensus         1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~   80 (340)
T cd05284           1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK   80 (340)
T ss_pred             CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence            578888866 6788889999999999999999999999999998877553323346688999999999999999999999


Q ss_pred             ccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-hh
Q 017426           97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PL  175 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~  175 (372)
                      +        ||+|+..+...|+.|++|..+..++|++..+.+. ...|+|++|+.+++++++++|+++++++++.++ .+
T Consensus        81 ~--------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~  151 (340)
T cd05284          81 E--------GDPVVVHPPWGCGTCRYCRRGEENYCENARFPGI-GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAG  151 (340)
T ss_pred             C--------CCEEEEcCCCCCCCChHHhCcCcccCCCCcccCc-cCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchH
Confidence            9        9999999888999999999999999999988876 568999999999999999999999999999876 67


Q ss_pred             HHHHHHHHh--cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHH
Q 017426          176 SVGVHACRR--ANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV  252 (372)
Q Consensus       176 ~~a~~~l~~--~~~~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~  252 (372)
                      .+||+++..  ..+.++++|||+|+|.+|++++|+|+.+| . .++++.+++++.+.++++|++++++++.  . +.+.+
T Consensus       152 ~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~-~~~~i  227 (340)
T cd05284         152 LTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLNASD--D-VVEEV  227 (340)
T ss_pred             HHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEcCCc--c-HHHHH
Confidence            899999864  46889999999999779999999999999 6 5777778899999999999988776433  3 66666


Q ss_pred             HHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-CCcHHHHHHHHH
Q 017426          253 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLR  331 (372)
Q Consensus       253 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~  331 (372)
                      +++.  .+.++|+++|++|+......++++|+++|+++.++.... ..+.......+++++.+.... .+.+.+++++++
T Consensus       228 ~~~~--~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  304 (340)
T cd05284         228 RELT--GGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWGTRAELVEVVALAE  304 (340)
T ss_pred             HHHh--CCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcceEEEEEecccHHHHHHHHHHHH
Confidence            6654  245799999999976688999999999999999986543 233333334677888776543 567889999999


Q ss_pred             cCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          332 SGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       332 ~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ++.+.  + ..+.|++  +++++|++.+.+++..+|+++.+
T Consensus       305 ~g~l~--~-~~~~~~~--~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         305 SGKVK--V-EITKFPL--EDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             hCCCC--c-ceEEEeH--HHHHHHHHHHHcCCccceEEecC
Confidence            99884  3 3467888  99999999999998899999863

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=1.9e-40  Score=314.43  Aligned_cols=337  Identities=30%  Similarity=0.482  Sum_probs=278.1

Q ss_pred             ceeEEEecCCceeEEEecCCCC-CCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      |+++++.++..+++.++|.|.| ++++|+||+.++++|++|+....|.+..   .++|.++|+|++|+|+++|+++++|+
T Consensus         1 m~a~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~   77 (386)
T cd08283           1 MKALVWHGKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG---MKKGDILGHEFMGVVEEVGPEVRNLK   77 (386)
T ss_pred             CeeEEEecCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC---CCCCccccccceEEEEEeCCCCCCCC
Confidence            6788888889999999999998 5999999999999999999998875532   34688999999999999999999999


Q ss_pred             ccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccc---------------c----CCCCCcceeEEEecCC--
Q 017426           97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA---------------T----PPVHGSLANQVVHPAD--  155 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~----~~~~g~~~e~~~v~~~--  155 (372)
                      +        ||+|+..+..+|++|++|..+.+++|+++....               .    ....|+|+||+.++++  
T Consensus        78 ~--------Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~  149 (386)
T cd08283          78 V--------GDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADV  149 (386)
T ss_pred             C--------CCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccC
Confidence            9        999999888899999999999999998754321               0    0136999999999988  


Q ss_pred             ceEECCCCCCcccccccc-hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC
Q 017426          156 LCFKLPDNVSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG  234 (372)
Q Consensus       156 ~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg  234 (372)
                      .++++|+++++.+|+.++ .+.+||++++.+++++|++|||+|+|.+|++++++|+..|+..++++++++++.+++++++
T Consensus       150 ~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~  229 (386)
T cd08283         150 GPFKIPDDLSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHL  229 (386)
T ss_pred             eEEECCCCCCHHHHhhhccchhhhHHHHhhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcC
Confidence            899999999999999776 6789999997788999999999988999999999999999866899999999999999984


Q ss_pred             CCeEEecCCCcc-cHHHHHHHHHHHcCCcceEEEeCCCcH---------------------HHHHHHHHHhccCCEEEEE
Q 017426          235 ADNIVKVSTNLQ-DIAEEVEKIQKAMGTGIDVSFDCAGLN---------------------KTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       235 ~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~~---------------------~~~~~~~~~l~~~G~~v~~  292 (372)
                      ...++++..  . ++.+.++++.  .+.++|++||++|+.                     ..+..++++++++|+++.+
T Consensus       230 ~~~vi~~~~--~~~~~~~l~~~~--~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~  305 (386)
T cd08283         230 GAETINFEE--VDDVVEALRELT--GGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSII  305 (386)
T ss_pred             CcEEEcCCc--chHHHHHHHHHc--CCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEE
Confidence            445555432  3 4666666654  245799999999752                     3678899999999999999


Q ss_pred             cCCCCC-ccccchhhhccCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCC-CceEEE
Q 017426          293 GMGHHE-MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVM  369 (372)
Q Consensus       293 g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~-~~gkvv  369 (372)
                      +..... ..+.......+.+++.+.... .+.+++++++++++.+.+.+.+++.|++  +++++|++.+.+++ ..+|+|
T Consensus       306 g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~  383 (386)
T cd08283         306 GVYGGTVNKFPIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPL--EDAPEAYKIFDKKEDGCIKVV  383 (386)
T ss_pred             cCCCCCcCccCHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecH--HHHHHHHHHHHhCCCCeEEEE
Confidence            864432 223333456778888876544 5678899999999998655457788888  99999999998876 568999


Q ss_pred             Ee
Q 017426          370 FN  371 (372)
Q Consensus       370 v~  371 (372)
                      ++
T Consensus       384 ~~  385 (386)
T cd08283         384 LK  385 (386)
T ss_pred             ec
Confidence            86

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=3.1e-40  Score=308.15  Aligned_cols=334  Identities=38%  Similarity=0.661  Sum_probs=272.7

Q ss_pred             EEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccccccc
Q 017426           22 WLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV  101 (372)
Q Consensus        22 ~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~gd~v  101 (372)
                      ++++.+.+.+.+.|.|.++++||+||+.++++|+.|+..............+|.++|+|++|+|+++|++|++|++    
T Consensus         2 ~~~~~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~----   77 (339)
T cd08232           2 VIHAAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAP----   77 (339)
T ss_pred             eeccCCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCC----
Confidence            5677889999999999999999999999999999998876321111111245778999999999999999999999    


Q ss_pred             cCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC----CCCCcceeEEEecCCceEECCCCCCcccccccchhHH
Q 017426          102 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP----PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV  177 (372)
Q Consensus       102 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~~  177 (372)
                          ||+|++.+..+|++|.+|..+..++|+.+..++..    ..+|+|++|+.+++++++++|+++++++|+++.++++
T Consensus        78 ----Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~~~~~~~  153 (339)
T cd08232          78 ----GQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAALAEPLAV  153 (339)
T ss_pred             ----CCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhhcchHHH
Confidence                99999999999999999999999999987655421    2479999999999999999999999999987668889


Q ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHH
Q 017426          178 GVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       178 a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      ||+++......++++|||.|+|.+|++++|+|+.+|+..++++++++++.++++++|++.+++++.  .+    +.++..
T Consensus       154 a~~~l~~~~~~~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~--~~----~~~~~~  227 (339)
T cd08232         154 ALHAVNRAGDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR--DP----LAAYAA  227 (339)
T ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--hh----hhhhhc
Confidence            999886644338999999888999999999999999966888888899889999999988776533  22    222221


Q ss_pred             HcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccCCCcHHHHHHHHHcCCCCC
Q 017426          258 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDV  337 (372)
Q Consensus       258 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ll~~g~~~~  337 (372)
                       ...++|++||+.|+...++..+++|+++|+++.++............+..+.+++.+.....+.+++++++++++.+.+
T Consensus       228 -~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  306 (339)
T cd08232         228 -DKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFDDEFAEAVRLLAAGRIDV  306 (339)
T ss_pred             -cCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecCHHHHHHHHHHHHcCCCCc
Confidence             2356999999999766788999999999999999854422233333445677777776656677899999999999865


Q ss_pred             CCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          338 KPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       338 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      .+.+.++|++  +++++|++.+.++...+|+|+++
T Consensus       307 ~~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         307 RPLITAVFPL--EEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             hhheeEEecH--HHHHHHHHHHHhCCCceeEEEeC
Confidence            5667788888  99999999998888899999874

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=2.1e-40  Score=315.26  Aligned_cols=342  Identities=21%  Similarity=0.240  Sum_probs=279.2

Q ss_pred             chhcceeEEEecC------CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCc-------ccCCCcccccc
Q 017426           14 GEEVNMAAWLLGV------NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF-------VVKEPMVIGHE   80 (372)
Q Consensus        14 ~~~~~~~~~~~~~------~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~-------~~~~p~~~G~e   80 (372)
                      .|.+|++.++..+      ..+++.++|.|.++++||+|+|.++++|++|++...|......       ....+.++|||
T Consensus         9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e   88 (393)
T cd08246           9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD   88 (393)
T ss_pred             CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence            6677999887521      3588999999999999999999999999999988766311000       01123589999


Q ss_pred             eeEEEEEecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEEC
Q 017426           81 CAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL  160 (372)
Q Consensus        81 ~~G~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~  160 (372)
                      ++|+|+++|++++.|++        ||+|++.+...|++|++|..+..++|+...+++....+|+|++|+.+++++++++
T Consensus        89 ~~G~V~~vG~~v~~~~~--------Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~i  160 (393)
T cd08246          89 ASGIVWAVGEGVKNWKV--------GDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPK  160 (393)
T ss_pred             eEEEEEEeCCCCCcCCC--------CCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEEC
Confidence            99999999999999999        9999999999999999999999999998888887667899999999999999999


Q ss_pred             CCCCCcccccccc-hhHHHHHHHHh---cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC
Q 017426          161 PDNVSLEEGAMCE-PLSVGVHACRR---ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA  235 (372)
Q Consensus       161 P~~~~~~~aa~~~-~~~~a~~~l~~---~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~  235 (372)
                      |+++++.+++.+. .+.+||+++..   +++++|++|||+|+ |.+|++++++|+.+|++ ++++++++++.++++++|+
T Consensus       161 P~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~-vv~~~~s~~~~~~~~~~G~  239 (393)
T cd08246         161 PKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGAN-PVAVVSSEEKAEYCRALGA  239 (393)
T ss_pred             CCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHcCC
Confidence            9999999988665 77899998743   67899999999997 99999999999999995 5667788999999999999


Q ss_pred             CeEEecCCCc--------------------ccHHHHHHHHHHHcCC-cceEEEeCCCcHHHHHHHHHHhccCCEEEEEcC
Q 017426          236 DNIVKVSTNL--------------------QDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       236 ~~v~~~~~~~--------------------~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      +.+++++..+                    ..+.+.+.++.  .+. ++|++||++|+ ..+..++++++++|+++.++.
T Consensus       240 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~--~~~~g~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  316 (393)
T cd08246         240 EGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDIL--GGREDPDIVFEHPGR-ATFPTSVFVCDRGGMVVICAG  316 (393)
T ss_pred             CEEEcccccccccccccccchhhhhhhhccchHHHHHHHHh--CCCCCCeEEEECCch-HhHHHHHHHhccCCEEEEEcc
Confidence            8887653211                    12444555543  344 79999999997 578899999999999999985


Q ss_pred             CCC-CccccchhhhccCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcC-CCceEEEEe
Q 017426          295 GHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFN  371 (372)
Q Consensus       295 ~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~-~~~gkvvv~  371 (372)
                      ... ...++...+..++.++.+.... .+.+.+++++++++.+  .+.++++|++  +++++|++.+.++ +..+|+++-
T Consensus       317 ~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~~gkvvv~  392 (393)
T cd08246         317 TTGYNHTYDNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRI--DPCLSKVFSL--DETPDAHQLMHRNQHHVGNMAVL  392 (393)
T ss_pred             cCCCCCCCcHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCc--eeeeeEEEeH--HHHHHHHHHHHhCccccceEEEe
Confidence            432 2234455566777788776544 4578899999999988  4557788988  9999999999988 788998863

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=5.2e-40  Score=306.87  Aligned_cols=337  Identities=32%  Similarity=0.570  Sum_probs=274.4

Q ss_pred             ceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      ||+.++.++ +.+++.+.|.|.|.++||+||+.++++|++|+.++.+.........+|.++|+|++|+|+++|+++++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~   80 (341)
T PRK05396          1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK   80 (341)
T ss_pred             CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence            567777654 4799999999999999999999999999999997765321111234677899999999999999999999


Q ss_pred             ccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccchhH
Q 017426           97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS  176 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~  176 (372)
                      +        ||+|+..+..+|+.|++|..+++++|++....+ ...+|+|++|+.++.+.++++|+++++.+++.+.++.
T Consensus        81 ~--------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~~~~~  151 (341)
T PRK05396         81 V--------GDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVG-VNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFG  151 (341)
T ss_pred             C--------CCEEEECCCCCCCCChhhhCcChhhCCCcceee-ecCCCcceeeEEechHHeEECcCCCCHHHhHhhhHHH
Confidence            9        999999999999999999999999998754333 3467999999999999999999999998888766777


Q ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHH
Q 017426          177 VGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       177 ~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~  256 (372)
                      ++++++.. ...+|++|+|+|+|.+|++++|+|+++|++.++++++++++.++++++|++.++++.  ..++.+.++++.
T Consensus       152 ~~~~~~~~-~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~--~~~~~~~~~~~~  228 (341)
T PRK05396        152 NAVHTALS-FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVA--KEDLRDVMAELG  228 (341)
T ss_pred             HHHHHHHc-CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCc--cccHHHHHHHhc
Confidence            77665533 346899999988899999999999999996677888889999999999998887654  355666666553


Q ss_pred             HHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC--CCcHHHHHHHHHcCC
Q 017426          257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--KNTWPLCLELLRSGK  334 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~ll~~g~  334 (372)
                        .+.++|++|||.|+...+..++++|+++|+++.++.......+....+..+.+++.++...  .+.+..+++++.++ 
T Consensus       229 --~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-  305 (341)
T PRK05396        229 --MTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSG-  305 (341)
T ss_pred             --CCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcC-
Confidence              3568999999999877889999999999999999865444444455667777887776422  34566788899888 


Q ss_pred             CCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          335 IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +.+.+.+.++|++  +++++|++.+.++. .+|+++++
T Consensus       306 ~~~~~~~~~~~~l--~~~~~a~~~~~~~~-~gk~vv~~  340 (341)
T PRK05396        306 LDLSPIITHRFPI--DDFQKGFEAMRSGQ-SGKVILDW  340 (341)
T ss_pred             CChhHheEEEEeH--HHHHHHHHHHhcCC-CceEEEec
Confidence            4345567788888  99999999988876 79999874

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=6.5e-40  Score=308.65  Aligned_cols=334  Identities=27%  Similarity=0.458  Sum_probs=274.8

Q ss_pred             eeEEEec-CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccc
Q 017426           19 MAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (372)
Q Consensus        19 ~~~~~~~-~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (372)
                      |++++.. +..+.+.+.+.|.+.++||+|++.++++|+.|++...+...    ..+|.++|+|++|+|+++|++++++++
T Consensus         2 ~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~----~~~~~i~g~e~~G~V~~vG~~v~~~~~   77 (365)
T cd05279           2 KAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP----TPLPVILGHEGAGIVESIGPGVTTLKP   77 (365)
T ss_pred             ceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC----CCCCcccccceeEEEEEeCCCcccCCC
Confidence            4666664 55899999999999999999999999999999998876432    345789999999999999999999999


Q ss_pred             cccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCC--------------------CCCcceeEEEecCCce
Q 017426           98 GDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP--------------------VHGSLANQVVHPADLC  157 (372)
Q Consensus        98 gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~g~~~e~~~v~~~~~  157 (372)
                              ||+|++.+...|++|.+|..+.+++|+....++...                    ..|+|++|+.++++.+
T Consensus        78 --------Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  149 (365)
T cd05279          78 --------GDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISL  149 (365)
T ss_pred             --------CCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCce
Confidence                    999999888899999999999999998766543211                    2479999999999999


Q ss_pred             EECCCCCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC
Q 017426          158 FKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA  235 (372)
Q Consensus       158 ~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~  235 (372)
                      +++|+++++++++.+. .+.+||+++ +.+++++|++|||+|+|.+|++++|+|+.+|+..++++++++++.++++++|+
T Consensus       150 ~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~  229 (365)
T cd05279         150 AKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGA  229 (365)
T ss_pred             EECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCC
Confidence            9999999999999877 678899887 45889999999999889999999999999999778888889999999999999


Q ss_pred             CeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhc-cCCEEEEEcCCC--CCccccchhhhccCcE
Q 017426          236 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATC-AGGKVCLVGMGH--HEMTVPLTPAAVREVD  312 (372)
Q Consensus       236 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~--~~~~~~~~~~~~~~~~  312 (372)
                      +.+++....+.++.+.++++.   ++++|++||++|....+..++++++ ++|+++.++...  ....+....+ .+..+
T Consensus       230 ~~~v~~~~~~~~~~~~l~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~  305 (365)
T cd05279         230 TECINPRDQDKPIVEVLTEMT---DGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRT  305 (365)
T ss_pred             CeecccccccchHHHHHHHHh---CCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCe
Confidence            887765332125666666654   4689999999987678889999999 999999998653  2334444445 56677


Q ss_pred             EEeecc----CCCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          313 VVGVFR----YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       313 i~~~~~----~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      +.+...    ..+.+.+++++++++.+.+.+..+++|++  +++++|++.+.+++. .|++++
T Consensus       306 l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~-~~~~~~  365 (365)
T cd05279         306 IKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPF--EEINDGFDLMRSGES-IRTILT  365 (365)
T ss_pred             EEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecH--HHHHHHHHHHhCCCc-eeeeeC
Confidence            776532    25678899999999998655578888988  999999999887754 477663

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=6.5e-40  Score=306.97  Aligned_cols=337  Identities=32%  Similarity=0.507  Sum_probs=276.5

Q ss_pred             ceeEEEecCCceeEEEecCCCC-CCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      ||++++.+++.+.+.+.|.|.| .++||+|||.++++|+.|+....|.+..   .++|.++|+|++|+|+++|+++++|+
T Consensus         1 ~ka~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v~~~~   77 (347)
T cd05278           1 MKALVYLGPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG---AKHGMILGHEFVGEVVEVGSDVKRLK   77 (347)
T ss_pred             CceEEEecCCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC---CCCCceeccceEEEEEEECCCccccC
Confidence            5788888888899999999999 9999999999999999999988875432   35588999999999999999999999


Q ss_pred             ccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccc--cCCCCCcceeEEEecCC--ceEECCCCCCccccccc
Q 017426           97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA--TPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMC  172 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~e~~~v~~~--~~~~~P~~~~~~~aa~~  172 (372)
                      +        ||+|+..+..+|+.|.+|..+..++|++...+.  .....|+|++|+.++++  +++++|+++++++|+.+
T Consensus        78 ~--------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l  149 (347)
T cd05278          78 P--------GDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALML  149 (347)
T ss_pred             C--------CCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhh
Confidence            9        999999999999999999999999998765432  12346999999999997  99999999999999987


Q ss_pred             c-hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHH
Q 017426          173 E-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE  251 (372)
Q Consensus       173 ~-~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~  251 (372)
                      + .+.+||+++...+++++++|||.|+|.+|++++|+|+.+|...++++++++++.++++++|++.++++.+  .++.+.
T Consensus       150 ~~~~~ta~~~~~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~  227 (347)
T cd05278         150 SDILPTGFHGAELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKN--GDIVEQ  227 (347)
T ss_pred             cchhhheeehhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCc--chHHHH
Confidence            6 6889999987788999999999888999999999999999756788888889999999999888776543  456666


Q ss_pred             HHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccc-cchhhhccCcEEEeeccC-CCcHHHHHHH
Q 017426          252 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTV-PLTPAAVREVDVVGVFRY-KNTWPLCLEL  329 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~i~~~~~~-~~~~~~~~~l  329 (372)
                      ++++.  .+.++|++||++++...+..++++|+++|+++.+|........ .......++..+.+.... .+.+++++++
T Consensus       228 i~~~~--~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (347)
T cd05278         228 ILELT--GGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDL  305 (347)
T ss_pred             HHHHc--CCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHH
Confidence            66553  3468999999999756888999999999999999854332211 111223456666654332 4678999999


Q ss_pred             HHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCC-ceEEEEe
Q 017426          330 LRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMFN  371 (372)
Q Consensus       330 l~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~-~gkvvv~  371 (372)
                      ++++.+.+.+.....|++  +++++|++.+..++. .+|++++
T Consensus       306 ~~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~vv~  346 (347)
T cd05278         306 IEEGKIDPSKLITHRFPL--DDILKAYRLFDNKPDGCIKVVIR  346 (347)
T ss_pred             HHcCCCChhHcEEEEecH--HHHHHHHHHHhcCCCCceEEEec
Confidence            999998544446677888  999999999888766 6899876

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=8.5e-40  Score=307.90  Aligned_cols=334  Identities=30%  Similarity=0.450  Sum_probs=272.9

Q ss_pred             hcceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           16 EVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        16 ~~~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      ++||++++.++ ..+++.+.+.|.+.++||+|||.++++|++|+....|...    ..+|.++|+|++|+|+++|+++.+
T Consensus         1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~----~~~p~v~G~e~~G~V~~vG~~v~~   76 (365)
T cd08278           1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP----TPLPAVLGHEGAGVVEAVGSAVTG   76 (365)
T ss_pred             CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC----CCCCcccccceeEEEEEeCCCccc
Confidence            46899998863 6788999999999999999999999999999999887432    346889999999999999999999


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc----------------------CCCCCcceeEEEe
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT----------------------PPVHGSLANQVVH  152 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~g~~~e~~~v  152 (372)
                      |++        ||+|++.+. .|++|.+|..+..++|++...+..                      ....|+|++|+.+
T Consensus        77 ~~~--------Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v  147 (365)
T cd08278          77 LKP--------GDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVV  147 (365)
T ss_pred             CCC--------CCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEe
Confidence            999        999988664 899999999999999986543211                      0125899999999


Q ss_pred             cCCceEECCCCCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHH
Q 017426          153 PADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA  230 (372)
Q Consensus       153 ~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~  230 (372)
                      +++.++++|+++++.+++.+. .+.+|+.++ +.+.++++++|||+|+|.+|++++|+|+.+|++.++++++++++.+++
T Consensus       148 ~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~  227 (365)
T cd08278         148 HERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELA  227 (365)
T ss_pred             cchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence            999999999999999888776 677888887 458899999999998899999999999999997789999999999999


Q ss_pred             HHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCC--CCccccchhhhc
Q 017426          231 KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH--HEMTVPLTPAAV  308 (372)
Q Consensus       231 ~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~  308 (372)
                      +++|++.++++.  ..++.+.+.+..   +.++|+++|++|++..+..++++++++|+++.+|...  ....++...+..
T Consensus       228 ~~~g~~~~i~~~--~~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  302 (365)
T cd08278         228 KELGATHVINPK--EEDLVAAIREIT---GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLV  302 (365)
T ss_pred             HHcCCcEEecCC--CcCHHHHHHHHh---CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhh
Confidence            999998877643  346666666553   5689999999997778899999999999999998642  223444455556


Q ss_pred             cCcEEEeeccC----CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          309 REVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       309 ~~~~i~~~~~~----~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      ++..+.++...    .+.+++++++++++.+.+. .+...|++  +++++|++.+.++.. .|++++
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~-~~~~~~~l--~~~~~a~~~~~~~~~-~k~~~~  365 (365)
T cd08278         303 SGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFD-KLVTFYPF--EDINQAIADSESGKV-IKPVLR  365 (365)
T ss_pred             cCceEEEeecCCcChHHHHHHHHHHHHcCCCChH-HheEEecH--HHHHHHHHHHHCCCc-eEEEEC
Confidence            77777765432    3467889999999988332 23457888  999999999988754 588764

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=1e-39  Score=305.22  Aligned_cols=334  Identities=30%  Similarity=0.500  Sum_probs=275.5

Q ss_pred             ceeEEEecCCceeEEEecCCCCC-CCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGVNTLKIQPFELPSLG-PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~-~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      |+++++.++..+++.++|.|.|. ++||+|++.++++|+.|+....|...    ..+|.++|+|++|+|+++|+++++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~   76 (344)
T cd08284           1 MKAVVFKGPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP----STPGFVLGHEFVGEVVEVGPEVRTLK   76 (344)
T ss_pred             CeeEEEecCCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC----CCCCcccccceEEEEEeeCCCccccC
Confidence            57888888889999999999985 99999999999999999988876432    34577899999999999999999999


Q ss_pred             ccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccc---cCCCCCcceeEEEecCC--ceEECCCCCCcccccc
Q 017426           97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA---TPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAM  171 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~e~~~v~~~--~~~~~P~~~~~~~aa~  171 (372)
                      +        ||+|++.+..+|++|.+|..+..+.|++...++   .....|+|++|+.++++  .++++|+++++.+|+.
T Consensus        77 ~--------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~  148 (344)
T cd08284          77 V--------GDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALL  148 (344)
T ss_pred             C--------CCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhh
Confidence            9        999999888999999999999999998766552   22346999999999975  9999999999998887


Q ss_pred             cc-hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHH
Q 017426          172 CE-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE  250 (372)
Q Consensus       172 ~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~  250 (372)
                      ++ .+.+||++++.+++++|++|||+|+|.+|++++|+|+.+|+..++++++++++.++++++|+.. ++.  ...++..
T Consensus       149 l~~~~~ta~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~-~~~--~~~~~~~  225 (344)
T cd08284         149 LGDILPTGYFGAKRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAEP-INF--EDAEPVE  225 (344)
T ss_pred             hcCchHHHHhhhHhcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCeE-Eec--CCcCHHH
Confidence            65 7889999997788899999999988999999999999999756788888889999999999753 332  3356666


Q ss_pred             HHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC-CccccchhhhccCcEEEeecc-CCCcHHHHHH
Q 017426          251 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFR-YKNTWPLCLE  328 (372)
Q Consensus       251 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~  328 (372)
                      .+.++.  .+.++|++||++++......++++++++|+++.+|.... ...........+++++.+... ..+.++++++
T Consensus       226 ~l~~~~--~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (344)
T cd08284         226 RVREAT--EGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLP  303 (344)
T ss_pred             HHHHHh--CCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHH
Confidence            666654  356899999999987788999999999999999986542 223333344566676655422 3678999999


Q ss_pred             HHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          329 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       329 ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      +++++.+.+.+.+.++|++  +++++|++.+.+++. +|+|++
T Consensus       304 ~~~~~~i~~~~~~~~~~~~--~~~~~a~~~~~~~~~-~k~Vi~  343 (344)
T cd08284         304 LLESGRLDLEFLIDHRMPL--EEAPEAYRLFDKRKV-LKVVLD  343 (344)
T ss_pred             HHHcCCCChHHhEeeeecH--HHHHHHHHHHhcCCc-eEEEec
Confidence            9999998544457788888  999999999888877 999875

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.6e-39  Score=304.02  Aligned_cols=338  Identities=32%  Similarity=0.539  Sum_probs=279.1

Q ss_pred             ceeEEEecCCceeEEEecCCCC-CCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      ||++++.+++.+++.+.|.|+| .++||+|+|.++++|+.|+..+.|.+..   ..+|.++|+|++|+|+++|+++++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~v~~~~   77 (345)
T cd08286           1 MKALVYHGPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT---VTPGRILGHEGVGVVEEVGSAVTNFK   77 (345)
T ss_pred             CceEEEecCCceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC---CCCCceecccceEEEEEeccCccccC
Confidence            5788888888899999999986 8999999999999999999998875432   24478999999999999999999999


Q ss_pred             ccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC--ceEECCCCCCcccccccc-
Q 017426           97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~--~~~~~P~~~~~~~aa~~~-  173 (372)
                      +        ||+|+..+...|+.|++|..+..+.|....+..+....|+|++|+.++++  .++++|+++++.+++.+. 
T Consensus        78 ~--------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~  149 (345)
T cd08286          78 V--------GDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSD  149 (345)
T ss_pred             C--------CCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccc
Confidence            9        99999998889999999999888888765553333356999999999987  899999999999888775 


Q ss_pred             hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHH
Q 017426          174 PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV  252 (372)
Q Consensus       174 ~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~  252 (372)
                      .+.+||.++ +.+++++|+++||+|+|.+|++++|+++.+|+..++++++++++.++++++|++.++++..  .++...+
T Consensus       150 ~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i  227 (345)
T cd08286         150 ILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK--GDAIEQV  227 (345)
T ss_pred             hhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccc--ccHHHHH
Confidence            667899865 5578999999999988999999999999999546788888999999999999988876543  4566666


Q ss_pred             HHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccCCCcHHHHHHHHHc
Q 017426          253 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRS  332 (372)
Q Consensus       253 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ll~~  332 (372)
                      .++.  .+.++|++||++|....+..+++.|+++|+++.+|.......++...+..+.+++.+.....+.++++++++++
T Consensus       228 ~~~~--~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (345)
T cd08286         228 LELT--DGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVDTNTTPMLLKLVSS  305 (345)
T ss_pred             HHHh--CCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCchhhHHHHHHHHHc
Confidence            6554  35679999999998778889999999999999998654334445555566788887754434678899999999


Q ss_pred             CCCCCCCceEEEecCChHHHHHHHHHHhcCC--CceEEEEeC
Q 017426          333 GKIDVKPLVTHRFGFSQKEVEEAFETSARGG--TAIKVMFNL  372 (372)
Q Consensus       333 g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~--~~gkvvv~~  372 (372)
                      +.+.+.+.++++|++  +++++|++.+....  ...|+++++
T Consensus       306 ~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         306 GKLDPSKLVTHRFKL--SEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             CCCChHHcEEeEeeH--HHHHHHHHHHhccCCCCeeEEEEeC
Confidence            998655557788988  99999999988653  456999875

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.3e-39  Score=304.10  Aligned_cols=329  Identities=30%  Similarity=0.469  Sum_probs=264.6

Q ss_pred             ceeEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhccc--------CCcccCCCcccccceeEEEEEec
Q 017426           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRC--------ADFVVKEPMVIGHECAGVIEKVG   89 (372)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~--------~~~~~~~p~~~G~e~~G~V~~vG   89 (372)
                      ||++++.++ .+++++++.|++.++||+|+|.++++|+.|+....|...        ......+|.++|+|++|+|+++|
T Consensus         1 m~a~~~~~~-~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG   79 (341)
T cd08262           1 MRAAVFRDG-PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYG   79 (341)
T ss_pred             CceEEEeCC-ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeC
Confidence            578888766 899999999999999999999999999999998876221        01112357889999999999999


Q ss_pred             CCCcc-ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccc
Q 017426           90 SEVKT-LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE  168 (372)
Q Consensus        90 ~~v~~-~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~  168 (372)
                      +++++ |++        ||+|+..+..+|+.|+.|..+..           ....|+|+||+.++.+.++++|+++++.+
T Consensus        80 ~~v~~~~~~--------Gd~V~~~~~~~~~~~~~~~~~~~-----------~~~~g~~~~~~~v~~~~~~~lP~~~s~~~  140 (341)
T cd08262          80 PGTERKLKV--------GTRVTSLPLLLCGQGASCGIGLS-----------PEAPGGYAEYMLLSEALLLRVPDGLSMED  140 (341)
T ss_pred             CCCcCCCCC--------CCEEEecCCcCCCCChhhhCCCC-----------cCCCCceeeeEEechHHeEECCCCCCHHH
Confidence            99987 999        99999999999999999954321           12469999999999999999999999998


Q ss_pred             ccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcc--
Q 017426          169 GAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ--  246 (372)
Q Consensus       169 aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~--  246 (372)
                      ++...++++||+++..+++++|++|||+|+|.+|++++|+|+.+|++.++++++++++.++++++|++.+++++....  
T Consensus       141 a~~~~~~~~a~~~~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~  220 (341)
T cd08262         141 AALTEPLAVGLHAVRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFA  220 (341)
T ss_pred             hhhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHH
Confidence            886567889998887789999999999988999999999999999987888888999999999999987776543211  


Q ss_pred             cHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-CCcHHH
Q 017426          247 DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPL  325 (372)
Q Consensus       247 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~  325 (372)
                      .+. .+...  ..+.++|++||++|+...+..++++++++|+++.++...............+++++.+.... .+.+++
T Consensus       221 ~~~-~~~~~--~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (341)
T cd08262         221 AWA-AELAR--AGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFAD  297 (341)
T ss_pred             HHH-HHHHH--hCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHHH
Confidence            222 22222  23567999999999755778899999999999999865322222222224466666655443 457889


Q ss_pred             HHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          326 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       326 ~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      ++++++++.+.+.+.+.++|++  +++++|++.+.++...+|+|++
T Consensus       298 ~~~l~~~g~i~~~~~i~~~~~l--~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         298 ALDALAEGKVDVAPMVTGTVGL--DGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             HHHHHHcCCCChHHheEEEeeH--HHHHHHHHHHhcCCCceEEEeC
Confidence            9999999999655556788888  9999999999999999999975

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=2.5e-39  Score=303.30  Aligned_cols=337  Identities=27%  Similarity=0.420  Sum_probs=278.0

Q ss_pred             ceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccC---------CcccCCCcccccceeEEEEE
Q 017426           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA---------DFVVKEPMVIGHECAGVIEK   87 (372)
Q Consensus        18 ~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~---------~~~~~~p~~~G~e~~G~V~~   87 (372)
                      ||+.++..+ ..+++.++|.|++.++||+|++.++++|++|+....|....         .....+|.++|+|++|+|++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~   80 (350)
T cd08240           1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA   80 (350)
T ss_pred             CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence            577777644 45889999999999999999999999999999988764310         00124567899999999999


Q ss_pred             ecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcc
Q 017426           88 VGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLE  167 (372)
Q Consensus        88 vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~  167 (372)
                      +|++++++++        ||+|++.++..|++|++|+.+..++|.+....+. ...|++++|+.++.+.++++|+++++.
T Consensus        81 vG~~v~~~~~--------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~p~~~s~~  151 (350)
T cd08240          81 VGPDAADVKV--------GDKVLVYPWIGCGECPVCLAGDENLCAKGRALGI-FQDGGYAEYVIVPHSRYLVDPGGLDPA  151 (350)
T ss_pred             eCCCCCCCCC--------CCEEEECCcCCCCCChHHHCcCcccCCCCCceee-eccCcceeeEEecHHHeeeCCCCCCHH
Confidence            9999999999        9999999999999999999999999987655543 367999999999999999999999999


Q ss_pred             cccccc-hhHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCc
Q 017426          168 EGAMCE-PLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL  245 (372)
Q Consensus       168 ~aa~~~-~~~~a~~~l~~-~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~  245 (372)
                      +++.+. .+.+||++++. ...+++++|||+|+|.+|++++|+|+.+|++.|+++++++++.+.++++|++.+++.  .+
T Consensus       152 ~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~--~~  229 (350)
T cd08240         152 LAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNG--SD  229 (350)
T ss_pred             HeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecC--CC
Confidence            998765 67899999865 455689999999889999999999999999778888899999999999999776653  33


Q ss_pred             ccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-CCcHH
Q 017426          246 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWP  324 (372)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~  324 (372)
                      .++.+.+.+..   ++++|++||++|.......++++|+++|+++.++..............++++++.+.... .+++.
T Consensus       230 ~~~~~~~~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  306 (350)
T cd08240         230 PDAAKRIIKAA---GGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELR  306 (350)
T ss_pred             ccHHHHHHHHh---CCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHH
Confidence            45555555543   338999999999777889999999999999999865443334444556688888887654 46788


Q ss_pred             HHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          325 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       325 ~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +++++++++.+.  +.....|++  +++++|++.+..+...+|++++.
T Consensus       307 ~~~~ll~~~~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvv~~  350 (350)
T cd08240         307 ELVALAKAGKLK--PIPLTERPL--SDVNDALDDLKAGKVVGRAVLKP  350 (350)
T ss_pred             HHHHHHHcCCCc--cceeeEEcH--HHHHHHHHHHHcCCccceEEecC
Confidence            999999999984  446678888  99999999999988889999863

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.3e-39  Score=299.73  Aligned_cols=318  Identities=30%  Similarity=0.477  Sum_probs=268.6

Q ss_pred             ceeEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccc
Q 017426           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (372)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (372)
                      ||++++.++..++++++|.|.+.++||+|||.++++|+.|+....|.+      ..|.++|+|++|+|+++|++   +++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~------~~~~~~G~e~~G~Vv~~G~~---~~~   71 (319)
T cd08242           1 MKALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYY------PFPGVPGHEFVGIVEEGPEA---ELV   71 (319)
T ss_pred             CeeEEEeCCCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCC------CCCCccCceEEEEEEEeCCC---CCC
Confidence            578888888889999999999999999999999999999999887643      25778999999999999998   668


Q ss_pred             cccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccchhHH
Q 017426           98 GDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV  177 (372)
Q Consensus        98 gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~~  177 (372)
                              ||+|...+...|++|.+|..+..++|+.....+....+|+|++|+.+++++++++|+++++++++.+.++++
T Consensus        72 --------G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~  143 (319)
T cd08242          72 --------GKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLAA  143 (319)
T ss_pred             --------CCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhhhHHHH
Confidence                    999999999999999999999999998776665434579999999999999999999999988886555666


Q ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHH
Q 017426          178 GVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       178 a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      ++.+++..++++|++|||+|+|.+|++++|+|+.+|++ +++++.++++.++++++|++.++++...             
T Consensus       144 ~~~~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~-------------  209 (319)
T cd08242         144 ALEILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGPD-VVLVGRHSEKLALARRLGVETVLPDEAE-------------  209 (319)
T ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCcEEeCcccc-------------
Confidence            77777778899999999998899999999999999996 7888888999999999999876654210             


Q ss_pred             HcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccCCCcHHHHHHHHHcCCCCC
Q 017426          258 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDV  337 (372)
Q Consensus       258 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ll~~g~~~~  337 (372)
                      ..+.++|++||++|+...+..++++++++|+++..+.......+....+..++.++.+....  .+++++++++++.+.+
T Consensus       210 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~l~~  287 (319)
T cd08242         210 SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCG--PFAPALRLLRKGLVDV  287 (319)
T ss_pred             ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEecc--cHHHHHHHHHcCCCCh
Confidence            13568999999999877889999999999999987654433444555566778888776532  4889999999999865


Q ss_pred             CCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          338 KPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       338 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      .+.+++.|++  +++++|++.+..+. .+|+|++
T Consensus       288 ~~~~~~~~~l--~~~~~a~~~~~~~~-~~k~vi~  318 (319)
T cd08242         288 DPLITAVYPL--EEALEAFERAAEPG-ALKVLLR  318 (319)
T ss_pred             hhceEEEEeH--HHHHHHHHHHhcCC-ceEEEeC
Confidence            5668899999  99999999998774 5899885

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.9e-39  Score=299.84  Aligned_cols=335  Identities=37%  Similarity=0.649  Sum_probs=276.9

Q ss_pred             ceeEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccc
Q 017426           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (372)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (372)
                      ||+++++.+..+.+.+.|.|.+.++|++|+|.++++|+.|+....+....   ..+|.++|+|++|+|+++|++++.|++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~---~~~~~~~g~e~~G~V~~~G~~v~~~~~   77 (337)
T cd08261           1 MKALVCEKPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPF---ASYPRILGHELSGEVVEVGEGVAGLKV   77 (337)
T ss_pred             CeEEEEeCCCceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCc---CCCCcccccccEEEEEEeCCCCCCCCC
Confidence            57888888888999999999999999999999999999999988764322   244778999999999999999999999


Q ss_pred             cccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccchhHH
Q 017426           98 GDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV  177 (372)
Q Consensus        98 gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~~  177 (372)
                              ||+|+..+..+|+.|..|..+++++|..-..++. ...|+|++|+.++++ ++++|+++++++|++++.+.+
T Consensus        78 --------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~~~~~~  147 (337)
T cd08261          78 --------GDRVVVDPYISCGECYACRKGRPNCCENLQVLGV-HRDGGFAEYIVVPAD-ALLVPEGLSLDQAALVEPLAI  147 (337)
T ss_pred             --------CCEEEECCCCCCCCChhhhCcCcccCCCCCeeee-cCCCcceeEEEechh-eEECCCCCCHHHhhhhchHHH
Confidence                    9999988888999999999999999954322221 246999999999999 999999999999987777778


Q ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHH
Q 017426          178 GVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       178 a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      ++++++..++++|++|||+|+|.+|++++|+|+.+|++ ++++.+++++.++++++|+++++++..  .++.+.+.++. 
T Consensus       148 a~~~~~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~~-v~~~~~s~~~~~~~~~~g~~~v~~~~~--~~~~~~l~~~~-  223 (337)
T cd08261         148 GAHAVRRAGVTAGDTVLVVGAGPIGLGVIQVAKARGAR-VIVVDIDDERLEFARELGADDTINVGD--EDVAARLRELT-  223 (337)
T ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEECCCHHHHHHHHHhCCCEEecCcc--cCHHHHHHHHh-
Confidence            88888778899999999998899999999999999995 777778899999999999988876543  45666676653 


Q ss_pred             HcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-CCcHHHHHHHHHcCCCC
Q 017426          258 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID  336 (372)
Q Consensus       258 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~~g~~~  336 (372)
                       .+.++|++||++|+...+..++++|+++|+++.++............+..+.+++.+.... .+.+++++++++++.+.
T Consensus       224 -~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~  302 (337)
T cd08261         224 -DGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVD  302 (337)
T ss_pred             -CCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCC
Confidence             3567999999998777889999999999999998865433333444455566666665332 45788999999999985


Q ss_pred             CCCceEEEecCChHHHHHHHHHHhcC-CCceEEEEeC
Q 017426          337 VKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFNL  372 (372)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~A~~~~~~~-~~~gkvvv~~  372 (372)
                      +.+.+..++++  +++++|++.+.++ ...+|+|+++
T Consensus       303 ~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         303 PEALITHRFPF--EDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             hhhheEEEeeH--HHHHHHHHHHhcCCCceEEEEEeC
Confidence            42257788888  9999999999988 4889999875

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=3.9e-39  Score=301.23  Aligned_cols=335  Identities=38%  Similarity=0.655  Sum_probs=280.8

Q ss_pred             ceeEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccc
Q 017426           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (372)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (372)
                      ||+.++++++.+.+.+.+.|++.+++|+|||.++++|+.|+....|...   ....|.++|+|++|+|+++|++++.|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~---~~~~~~~~g~~~~G~V~~~G~~v~~~~~   77 (343)
T cd08235           1 MKAAVLHGPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT---DLKPPRILGHEIAGEIVEVGDGVTGFKV   77 (343)
T ss_pred             CeEEEEecCCceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc---cCCCCcccccceEEEEEeeCCCCCCCCC
Confidence            5788888888899999999999999999999999999999998876432   1244778999999999999999999999


Q ss_pred             cccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCc-----eEECCCCCCccccccc
Q 017426           98 GDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL-----CFKLPDNVSLEEGAMC  172 (372)
Q Consensus        98 gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~-----~~~~P~~~~~~~aa~~  172 (372)
                              ||+|++.+...|++|++|..+..++|+....++. ...|+|++|+.+++++     ++++|+++++.+|+++
T Consensus        78 --------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~  148 (343)
T cd08235          78 --------GDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGN-LYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV  148 (343)
T ss_pred             --------CCEEEEccCCCCCCChHHHCcCcccCCCcceecc-CCCCcceeeEEecccccccccEEECCCCCCHHHHHhh
Confidence                    9999999999999999999999999987765543 3579999999999999     9999999999999877


Q ss_pred             chhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHH
Q 017426          173 EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV  252 (372)
Q Consensus       173 ~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~  252 (372)
                      .++.+||++++..++++|++|||+|+|.+|++++|+|+..|++.++++.+++++.+.++++|++.+++++  +.++.+.+
T Consensus       149 ~~~~~a~~~l~~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~--~~~~~~~i  226 (343)
T cd08235         149 EPLACCINAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAA--EEDLVEKV  226 (343)
T ss_pred             hHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCC--ccCHHHHH
Confidence            6778899998777899999999998899999999999999996578888889999988999998776643  35677767


Q ss_pred             HHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC--ccccchhhhccCcEEEeeccC-CCcHHHHHHH
Q 017426          253 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGVFRY-KNTWPLCLEL  329 (372)
Q Consensus       253 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~l  329 (372)
                      ++..  .+.++|++||++++...+...+++++++|+++.++.....  ..........+.+++.+.... .+.+++++++
T Consensus       227 ~~~~--~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l  304 (343)
T cd08235         227 RELT--DGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALEL  304 (343)
T ss_pred             HHHh--CCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHH
Confidence            6653  3567999999999766888999999999999998753322  233334566677777766544 5678899999


Q ss_pred             HHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          330 LRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       330 l~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      ++++.+.+.+.+..+|++  +++++|++.+.+++ .+|+|++
T Consensus       305 ~~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~-~~k~vi~  343 (343)
T cd08235         305 IASGKIDVKDLITHRFPL--EDIEEAFELAADGK-SLKIVIT  343 (343)
T ss_pred             HHcCCCChHHheeeEeeH--HHHHHHHHHHhCCC-cEEEEeC
Confidence            999998544456778888  99999999999998 8999874

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.2e-39  Score=305.87  Aligned_cols=337  Identities=30%  Similarity=0.514  Sum_probs=271.4

Q ss_pred             eeEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccC----CcccCCCcccccceeEEEEEecCCCcc
Q 017426           19 MAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA----DFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        19 ~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~----~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      ...++.. ..+++.+.|.|.++++||+|++.++++|++|+....+...+    .....+|.++|+|++|+|+++|+++++
T Consensus        30 ~~~~~~~-~~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~  108 (384)
T cd08265          30 GSKVWRY-PELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKN  108 (384)
T ss_pred             eeEEEeC-CCEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCC
Confidence            3444443 47999999999999999999999999999999887632111    011345789999999999999999999


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCC-------CCcc
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN-------VSLE  167 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~-------~~~~  167 (372)
                      |++        ||+|++.+..+|+.|++|..+.+++|.++...+. ..+|+|++|+.++++.++++|++       +++.
T Consensus       109 ~~~--------Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~  179 (384)
T cd08265         109 FEK--------GDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGF-SADGAFAEYIAVNARYAWEINELREIYSEDKAFE  179 (384)
T ss_pred             CCC--------CCEEEECCCCCCCCChhhhCcCcccCCCcceeee-cCCCcceeeEEechHHeEECCccccccccCCCHH
Confidence            999        9999999999999999999999999998776554 24799999999999999999986       4556


Q ss_pred             cccccchhHHHHHHHH-h-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCC-
Q 017426          168 EGAMCEPLSVGVHACR-R-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-  244 (372)
Q Consensus       168 ~aa~~~~~~~a~~~l~-~-~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~-  244 (372)
                      .|+...++++||+++. . +++++|++|||+|+|.+|++++|+|+.+|+..++++++++++.++++++|++.++++.+. 
T Consensus       180 ~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~  259 (384)
T cd08265         180 AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMR  259 (384)
T ss_pred             HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccc
Confidence            5555668889999984 4 689999999999889999999999999999778888888999999999999887765432 


Q ss_pred             cccHHHHHHHHHHHcCCcceEEEeCCCcH-HHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC--CC
Q 017426          245 LQDIAEEVEKIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--KN  321 (372)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~~  321 (372)
                      ..++.+.++++.  .+.++|+|+|+.|+. ..+..++++|+++|+++.+|.......+....+..+..++.+....  ..
T Consensus       260 ~~~~~~~v~~~~--~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  337 (384)
T cd08265         260 DCLSGEKVMEVT--KGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHG  337 (384)
T ss_pred             cccHHHHHHHhc--CCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcc
Confidence            235666676654  356899999999863 4678899999999999999865433333444556666777776532  45


Q ss_pred             cHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEE
Q 017426          322 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  370 (372)
Q Consensus       322 ~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv  370 (372)
                      .+++++++++++.+.+...++++|++  +++++|++...++ ..+|+++
T Consensus       338 ~~~~~~~ll~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         338 IFPSVIKLMASGKIDMTKIITARFPL--EGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             hHHHHHHHHHcCCCChHHheEEEeeH--HHHHHHHHHHhcC-CCceEEe
Confidence            78999999999998544457788888  9999999997665 6788875

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=4.8e-39  Score=302.72  Aligned_cols=334  Identities=34%  Similarity=0.525  Sum_probs=272.6

Q ss_pred             ceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      ||++++..+ ..+++.++|.|.++++||+|++.++++|+.|+....|...    ..+|.++|+|++|+|+++|++++.|+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~   76 (363)
T cd08279           1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP----APLPAVLGHEGAGVVEEVGPGVTGVK   76 (363)
T ss_pred             CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC----CCCCccccccceEEEEEeCCCccccC
Confidence            688888865 6789999999999999999999999999999998876432    35577899999999999999999999


Q ss_pred             ccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---------------cc----CCCCCcceeEEEecCCce
Q 017426           97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---------------AT----PPVHGSLANQVVHPADLC  157 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~----~~~~g~~~e~~~v~~~~~  157 (372)
                      +        ||+|+..+...|++|.+|+.++.++|++...+               +.    ....|+|++|+.++++++
T Consensus        77 ~--------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  148 (363)
T cd08279          77 P--------GDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASV  148 (363)
T ss_pred             C--------CCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccE
Confidence            9        99999999999999999999999999875421               00    024699999999999999


Q ss_pred             EECCCCCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC
Q 017426          158 FKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA  235 (372)
Q Consensus       158 ~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~  235 (372)
                      +++|+++++++++.++ .+.+||.++ +.++++++++|||+|+|.+|++++++|+.+|+..++++++++++.++++++|+
T Consensus       149 ~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~  228 (363)
T cd08279         149 VKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGA  228 (363)
T ss_pred             EECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCC
Confidence            9999999999998776 567888886 45889999999999779999999999999999668888889999999999999


Q ss_pred             CeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC--CccccchhhhccCcEE
Q 017426          236 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVPLTPAAVREVDV  313 (372)
Q Consensus       236 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i  313 (372)
                      +++++.+  ..++...++++.  .+.++|++||++++...+..++++++++|+++.++....  ...+....+..+...+
T Consensus       229 ~~vv~~~--~~~~~~~l~~~~--~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  304 (363)
T cd08279         229 THTVNAS--EDDAVEAVRDLT--DGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRL  304 (363)
T ss_pred             eEEeCCC--CccHHHHHHHHc--CCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEE
Confidence            8776543  346666666553  246799999999976788999999999999999975442  2334444445555555


Q ss_pred             Eeec----cCCCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEE
Q 017426          314 VGVF----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM  369 (372)
Q Consensus       314 ~~~~----~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvv  369 (372)
                      .+..    ...+.+++++++++++.+.+.+.+.++|++  +++++|++.+.+++..+.++
T Consensus       305 ~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         305 QGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSL--DEINEAFADMLAGENARGVI  362 (363)
T ss_pred             EEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcH--HHHHHHHHHHhcCCceeEEe
Confidence            5542    224678899999999998544457788888  99999999998887664444

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=4.4e-39  Score=301.15  Aligned_cols=334  Identities=28%  Similarity=0.485  Sum_probs=274.9

Q ss_pred             ceeEEEecCCceeEEEecCCCC-CCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      ||+++++++..+.+.+.|.|.| +++||+||+.++++|++|+....|...    ...|.++|||++|+|+++|++++.++
T Consensus         1 m~~~~~~~~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~   76 (345)
T cd08287           1 MRATVIHGPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP----TRAPAPIGHEFVGVVEEVGSEVTSVK   76 (345)
T ss_pred             CceeEEecCCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC----CCCCcccccceEEEEEEeCCCCCccC
Confidence            6888899888999999999996 899999999999999999988876432    23478999999999999999999999


Q ss_pred             ccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC--ceEECCCCCCccccccc--
Q 017426           97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMC--  172 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~--~~~~~P~~~~~~~aa~~--  172 (372)
                      +        ||+|+.....+|+.|.+|..+..++|.+...++ ...+|+|+||+.++.+  .++++|+++++..+...  
T Consensus        77 ~--------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~  147 (345)
T cd08287          77 P--------GDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWG-AFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSL  147 (345)
T ss_pred             C--------CCEEEeccccCCCCChhhhCcCcccCCCCCccc-CCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhh
Confidence            9        999988667789999999999999998765544 3577999999999975  99999999987222211  


Q ss_pred             ----chhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccH
Q 017426          173 ----EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI  248 (372)
Q Consensus       173 ----~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~  248 (372)
                          ..+.+|+++++.+++++|++++|.|+|.+|++++|+|+++|++.++++++++++.++++++|++.++++..  .++
T Consensus       148 ~~l~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~--~~~  225 (345)
T cd08287         148 LALSDVMGTGHHAAVSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERG--EEA  225 (345)
T ss_pred             HhhhcHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCc--ccH
Confidence                35678888887788999999999888999999999999999977888988888999999999988876533  456


Q ss_pred             HHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-CCcHHHHH
Q 017426          249 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCL  327 (372)
Q Consensus       249 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~  327 (372)
                      .+.+.+..  .+.++|++||++|+...+..++++++++|+++.++.......++......++.++.+.... .+.+++++
T Consensus       226 ~~~i~~~~--~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (345)
T cd08287         226 VARVRELT--GGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELL  303 (345)
T ss_pred             HHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHH
Confidence            66666553  3567999999998877889999999999999998865433334443456778888775443 56789999


Q ss_pred             HHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          328 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       328 ~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      +++.++.+.+.+.+++.|++  +++++|++.+..+.. .|++|+
T Consensus       304 ~~~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~-~k~~~~  344 (345)
T cd08287         304 DDVLAGRINPGRVFDLTLPL--DEVAEGYRAMDERRA-IKVLLR  344 (345)
T ss_pred             HHHHcCCCCHHHhEEeeecH--HHHHHHHHHHhCCCc-eEEEeC
Confidence            99999998554456788888  999999999887754 499885

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.1e-38  Score=300.79  Aligned_cols=336  Identities=31%  Similarity=0.520  Sum_probs=278.4

Q ss_pred             ceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc--
Q 017426           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT--   94 (372)
Q Consensus        18 ~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~--   94 (372)
                      ||+.++..+ ..+.+.+.|.|.+.++||+|++.++++|+.|+....+..+    ..+|.++|+|++|+|+.+|+++++  
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~----~~~p~~~g~e~~G~v~~vG~~~~~~~   76 (367)
T cd08263           1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP----FPPPFVLGHEISGEVVEVGPNVENPY   76 (367)
T ss_pred             CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCC----CCCCcccccccceEEEEeCCCCCCCC
Confidence            577777765 5688899999999999999999999999999998876442    256789999999999999999988  


Q ss_pred             -ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC---------------------CCCCcceeEEEe
Q 017426           95 -LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------------PVHGSLANQVVH  152 (372)
Q Consensus        95 -~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~g~~~e~~~v  152 (372)
                       |++        ||+|++.+...|+.|.+|..+..++|++..+|...                     ...|+|++|+.+
T Consensus        77 ~~~~--------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  148 (367)
T cd08263          77 GLSV--------GDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVV  148 (367)
T ss_pred             cCCC--------CCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEe
Confidence             999        99999988899999999999999999976533210                     136999999999


Q ss_pred             cCCceEECCCCCCcccccccc-hhHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHH
Q 017426          153 PADLCFKLPDNVSLEEGAMCE-PLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA  230 (372)
Q Consensus       153 ~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~  230 (372)
                      +.+.++++|+++++.+++.++ .+.+||.++.. ..++++++|||+|+|.+|++++++|+.+|+++++++++++++.+++
T Consensus       149 ~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~  228 (367)
T cd08263         149 PATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKA  228 (367)
T ss_pred             chhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence            999999999999999999776 67899999854 6789999999998899999999999999997688888889999999


Q ss_pred             HHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC--Cccccchhhhc
Q 017426          231 KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVPLTPAAV  308 (372)
Q Consensus       231 ~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~  308 (372)
                      +++|++.+++++  ..++.+.+++..  .+.++|++||++++.+....++++|+++|+++.++....  ...+....+..
T Consensus       229 ~~~g~~~v~~~~--~~~~~~~l~~~~--~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  304 (367)
T cd08263         229 KELGATHTVNAA--KEDAVAAIREIT--GGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVR  304 (367)
T ss_pred             HHhCCceEecCC--cccHHHHHHHHh--CCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhh
Confidence            999998877643  356666666553  356799999999986578889999999999999985432  22333344446


Q ss_pred             cCcEEEeeccC--CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          309 REVDVVGVFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       309 ~~~~i~~~~~~--~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      ++.++.++...  .+.+++++++++++.+.+.+.++++|++  +++.+|++.+.++...||+|++
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         305 RGIKIIGSYGARPRQDLPELVGLAASGKLDPEALVTHKYKL--EEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             CCeEEEecCCCCcHHHHHHHHHHHHcCCCCcccceeEEecH--HHHHHHHHHHhcCCccceeeeC
Confidence            77777775433  3578899999999998654457788888  9999999999999888999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=6.1e-39  Score=305.40  Aligned_cols=342  Identities=21%  Similarity=0.234  Sum_probs=275.0

Q ss_pred             hhcceeEEEec-----C-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCC-------cccCCC-cccccc
Q 017426           15 EEVNMAAWLLG-----V-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCAD-------FVVKEP-MVIGHE   80 (372)
Q Consensus        15 ~~~~~~~~~~~-----~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~-------~~~~~p-~~~G~e   80 (372)
                      +.+||+.++..     + +.+++.++|.|.|.++|++|++.++++|+.|.+...+.....       .....| .++|+|
T Consensus         5 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e   84 (398)
T TIGR01751         5 PETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSD   84 (398)
T ss_pred             chhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccc
Confidence            45688888842     2 469999999999999999999999999999987665422100       001223 379999


Q ss_pred             eeEEEEEecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEEC
Q 017426           81 CAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL  160 (372)
Q Consensus        81 ~~G~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~  160 (372)
                      ++|+|+++|++++.|++        ||+|++.+...|++|++|..+..++|.....++....+|+|+||+.+++++++++
T Consensus        85 ~~G~V~~vG~~v~~~~~--------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~v  156 (398)
T TIGR01751        85 ASGVVWRVGPGVTRWKV--------GDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPK  156 (398)
T ss_pred             eEEEEEEeCCCCCCCCC--------CCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEEC
Confidence            99999999999999999        9999999999999999999999999988766665556899999999999999999


Q ss_pred             CCCCCcccccccc-hhHHHHHHHH---hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC
Q 017426          161 PDNVSLEEGAMCE-PLSVGVHACR---RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA  235 (372)
Q Consensus       161 P~~~~~~~aa~~~-~~~~a~~~l~---~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~  235 (372)
                      |+++++++++.+. .+.+||.++.   .+++++|+++||+|+ |.+|++++|+|+++|++ ++++++++++.++++++|+
T Consensus       157 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~-vi~~~~~~~~~~~~~~~g~  235 (398)
T TIGR01751       157 PKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGN-PVAVVSSPEKAEYCRELGA  235 (398)
T ss_pred             CCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCC
Confidence            9999999888766 7788999874   377899999999998 99999999999999995 5666788899999999999


Q ss_pred             CeEEecCCCc--------------------ccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCC
Q 017426          236 DNIVKVSTNL--------------------QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG  295 (372)
Q Consensus       236 ~~v~~~~~~~--------------------~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  295 (372)
                      +.+++++...                    ..+.+.+.+++  .+.++|++|||+|. ..+..++++++++|+++.+|..
T Consensus       236 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~  312 (398)
T TIGR01751       236 EAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELT--GGEDPDIVFEHPGR-ATFPTSVFVCRRGGMVVICGGT  312 (398)
T ss_pred             CEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHc--CCCCceEEEECCcH-HHHHHHHHhhccCCEEEEEccc
Confidence            9888753310                    11333344332  34679999999996 5788999999999999999864


Q ss_pred             CCC-ccccchhhhccCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          296 HHE-MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       296 ~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ... ..++...+..++.++.+.... .+.+++++++++++.+  .+.+++++++  ++++++++.+.++...+|+|+.+
T Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvv~~  387 (398)
T TIGR01751       313 TGYNHDYDNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRI--DPTLSKVYPL--EEIGQAHQDVHRNHHQGNVAVLV  387 (398)
T ss_pred             cCCCCCcCHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCc--ccceeeEEcH--HHHHHHHHHHHcCCCCceEEEEe
Confidence            332 344445555666777766533 3457889999999988  4557788888  99999999999998899999864

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=1.9e-38  Score=299.80  Aligned_cols=334  Identities=27%  Similarity=0.421  Sum_probs=270.2

Q ss_pred             ceeEEEecCCceeEEEecCCCC-CCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      ||+.++.++..+++.++|.|++ +++||+|||.++++|+.|+....|...    ..+|.++|||++|+|+++|++++.|+
T Consensus         1 m~~~~~~~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~----~~~p~~~g~e~~G~V~~vG~~v~~~~   76 (375)
T cd08282           1 MKAVVYGGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG----AEPGLVLGHEAMGEVEEVGSAVESLK   76 (375)
T ss_pred             CceEEEecCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC----CCCCceeccccEEEEEEeCCCCCcCC
Confidence            4677777888999999999996 899999999999999999999877542    24588999999999999999999999


Q ss_pred             ccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccc---------cccCCCCCcceeEEEecCC--ceEECCCCCC
Q 017426           97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF---------FATPPVHGSLANQVVHPAD--LCFKLPDNVS  165 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~g~~~e~~~v~~~--~~~~~P~~~~  165 (372)
                      +        ||+|+..+..+|+.|++|..++.++|.+...         ......+|+|+||+.++.+  .++++|++++
T Consensus        77 ~--------Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~  148 (375)
T cd08282          77 V--------GDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDG  148 (375)
T ss_pred             C--------CCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCC
Confidence            9        9999999999999999999999999976421         1112346999999999976  8999999999


Q ss_pred             ccc---ccccc-hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEec
Q 017426          166 LEE---GAMCE-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  241 (372)
Q Consensus       166 ~~~---aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~  241 (372)
                      +.+   ++.+. .+.+||+++..+++++|++|||.|+|.+|++++|+|+.+|+..++++++++++.++++++|+. .+++
T Consensus       149 ~~~~~~~a~~~~~~~ta~~a~~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~  227 (375)
T cd08282         149 AKEKDDYLMLSDIFPTGWHGLELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PIDF  227 (375)
T ss_pred             hhhhhheeeecchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-Eecc
Confidence            884   45444 788999999778899999999988899999999999999986677888999999999999984 3433


Q ss_pred             CCCcccHHHHHHHHHHHcCCcceEEEeCCCcHH-----------HHHHHHHHhccCCEEEEEcCCCC-C-----------
Q 017426          242 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK-----------TMSTALGATCAGGKVCLVGMGHH-E-----------  298 (372)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~-----------~~~~~~~~l~~~G~~v~~g~~~~-~-----------  298 (372)
                        ..+++.+.+.++.   ++++|++|||+|+..           .+..++++++++|+++.++.... .           
T Consensus       228 --~~~~~~~~i~~~~---~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~  302 (375)
T cd08282         228 --SDGDPVEQILGLE---PGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQG  302 (375)
T ss_pred             --CcccHHHHHHHhh---CCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCc
Confidence              2356666666553   357999999998752           47889999999999988774321 1           


Q ss_pred             -ccccchhhhccCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          299 -MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       299 -~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                       ..+....+..++..+.+.... .+.++++++++.++.+.+...++++|++  +++++|++.+.++. .+|+|+++
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~-~~kvvv~~  375 (375)
T cd08282         303 ELSFDFGLLWAKGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISL--EDAPEAYARFDKRL-ETKVVIKP  375 (375)
T ss_pred             cccccHHHHHhcCcEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeH--HHHHHHHHHHhcCC-ceEEEeCC
Confidence             122333455566666555442 5678899999999999544458899998  99999999999887 88999864

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.7e-38  Score=295.83  Aligned_cols=335  Identities=30%  Similarity=0.469  Sum_probs=277.3

Q ss_pred             ceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      ||++++.++ ..+.+.+.|.|.+.++||+|++.++++|+.|+....|....   ..+|.++|+|++|.|+++|++++.|+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~~~~~~   77 (345)
T cd08260           1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD---VTLPHVPGHEFAGVVVEVGEDVSRWR   77 (345)
T ss_pred             CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC---CCCCeeeccceeEEEEEECCCCccCC
Confidence            678787654 45888999999999999999999999999999988875421   35588999999999999999999999


Q ss_pred             ccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC--ceEECCCCCCcccccccc-
Q 017426           97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~--~~~~~P~~~~~~~aa~~~-  173 (372)
                      +        ||+|+..+...|++|++|..+..++|++....+. ...|+|++|+.+++.  +++++|+++++.+++.+. 
T Consensus        78 ~--------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~  148 (345)
T cd08260          78 V--------GDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGF-THPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGC  148 (345)
T ss_pred             C--------CCEEEECCCCCCCCCccccCcCcccCCCCccccc-CCCCcceeEEEcccccCceEECCCCCCHHHhhhhcc
Confidence            9        9999887778899999999999999998643333 247999999999984  899999999999888776 


Q ss_pred             hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHH
Q 017426          174 PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV  252 (372)
Q Consensus       174 ~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~  252 (372)
                      .+.+||+++ +..++.++++++|+|+|.+|++++|+|+.+|++ ++++.+++++.+.++++|++.++++.. ..++.+.+
T Consensus       149 ~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~~  226 (345)
T cd08260         149 RFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGAR-VIAVDIDDDKLELARELGAVATVNASE-VEDVAAAV  226 (345)
T ss_pred             chHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHhCCCEEEcccc-chhHHHHH
Confidence            678999998 457889999999999999999999999999994 778878899999999999988876532 14566666


Q ss_pred             HHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC---ccccchhhhccCcEEEeeccC-CCcHHHHHH
Q 017426          253 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE---MTVPLTPAAVREVDVVGVFRY-KNTWPLCLE  328 (372)
Q Consensus       253 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~  328 (372)
                      ..+.   .+++|++||++|+.......+++++++|+++.+|.....   ..++...+..+.+++.+.... .+.++++++
T Consensus       227 ~~~~---~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (345)
T cd08260         227 RDLT---GGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLA  303 (345)
T ss_pred             HHHh---CCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHH
Confidence            6553   238999999999766888999999999999999864332   233444455677888876543 567899999


Q ss_pred             HHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          329 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       329 ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      +++++.+.+.+.+.+.+++  +++++|++.+.++...+|+|++
T Consensus       304 l~~~~~i~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         304 LIASGKLDPEPLVGRTISL--DEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             HHHcCCCChhhheeEEecH--HHHHHHHHHHHcCCCCceEEec
Confidence            9999998544446788888  9999999999999899999875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.2e-38  Score=297.21  Aligned_cols=326  Identities=25%  Similarity=0.396  Sum_probs=269.8

Q ss_pred             eEEEec-CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccccc
Q 017426           20 AAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPG   98 (372)
Q Consensus        20 ~~~~~~-~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~g   98 (372)
                      +.+.+. ...+++.+.+.|.|.++|++||+.++++|+.|+....|...   ...+|.++|+|++|+|+++|+++++|++ 
T Consensus         2 ~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~V~~vG~~v~~~~~-   77 (337)
T cd05283           2 GYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWG---PTKYPLVPGHEIVGIVVAVGSKVTKFKV-   77 (337)
T ss_pred             ceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcC---CCCCCcccCcceeeEEEEECCCCcccCC-
Confidence            445553 47899999999999999999999999999999999887542   2355889999999999999999999999 


Q ss_pred             ccccCCCCCEEE-EcCCcCCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCceEECCCCCCcccccc
Q 017426           99 DRVTLVPGDRVA-LEPGISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAM  171 (372)
Q Consensus        99 d~v~~~~Gd~V~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~  171 (372)
                             ||+|+ ......|++|.+|..++.++|+++.+..      +....|+|+||+.++++.++++|+++++.+++.
T Consensus        78 -------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~  150 (337)
T cd05283          78 -------GDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAP  150 (337)
T ss_pred             -------CCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhh
Confidence                   99997 4445589999999999999998876542      223579999999999999999999999999887


Q ss_pred             cc-hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHH
Q 017426          172 CE-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE  250 (372)
Q Consensus       172 ~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~  250 (372)
                      +. .+.+||++++...+++|++++|.|+|.+|++++++++.+|+ .++++++++++.++++++|++.+++...  .++. 
T Consensus       151 l~~~~~ta~~~~~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~-  226 (337)
T cd05283         151 LLCAGITVYSPLKRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD--PEAM-  226 (337)
T ss_pred             hhhHHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc--hhhh-
Confidence            66 56789999887778999999998889999999999999999 5788888889999999999888765322  2221 


Q ss_pred             HHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-CCcHHHHHHH
Q 017426          251 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLEL  329 (372)
Q Consensus       251 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~l  329 (372)
                        +.    .+.++|++||+++.......++++|+++|+++.+|.......++...+..++.++.+.... .+.++.++++
T Consensus       227 --~~----~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  300 (337)
T cd05283         227 --KK----AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDF  300 (337)
T ss_pred             --hh----ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHH
Confidence              11    2468999999999865688999999999999999865443344555556788888887654 5678899999


Q ss_pred             HHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          330 LRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       330 l~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      ++++.+  .+. .+.|++  +++++|++.+.+++..||+|++
T Consensus       301 ~~~~~l--~~~-~~~~~~--~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         301 AAEHGI--KPW-VEVIPM--DGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             HHhCCC--ccc-eEEEEH--HHHHHHHHHHHcCCCcceEeeC
Confidence            999988  444 467888  9999999999999889999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=2.7e-38  Score=294.43  Aligned_cols=331  Identities=37%  Similarity=0.611  Sum_probs=276.4

Q ss_pred             ceeEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccc
Q 017426           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (372)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (372)
                      ||+.++.+++.+.+.+.+.|++.++||+||+.++++|+.|+....|...    ..+|.++|+|++|+|+.+|+++++|++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~----~~~p~~~g~~~~G~v~~vG~~v~~~~~   76 (334)
T cd08234           1 MKALVYEGPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFG----AAPPLVPGHEFAGVVVAVGSKVTGFKV   76 (334)
T ss_pred             CeeEEecCCCceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCC----CCCCcccccceEEEEEEeCCCCCCCCC
Confidence            6788888888899999999999999999999999999999998877542    236789999999999999999999999


Q ss_pred             cccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccchhHH
Q 017426           98 GDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV  177 (372)
Q Consensus        98 gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~~  177 (372)
                              ||+|+..+...|+.|.+|..++.++|+....++. ...|+|++|+.++++.++++|+++++.+|+.+..+.+
T Consensus        77 --------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~  147 (334)
T cd08234          77 --------GDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGV-TRNGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSC  147 (334)
T ss_pred             --------CCEEEEcCCcCCCCCccccCcChhhCCCcceecc-CCCCcceeEEEecHHHcEECcCCCCHHHHhhhhHHHH
Confidence                    9999998889999999999999999988765433 2579999999999999999999999999887667778


Q ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHH
Q 017426          178 GVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       178 a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      ++++++.+++++|+++||+|+|.+|++++++|+.+|+++++++++++++.+.++++|++.+++++.  .++... + .  
T Consensus       148 a~~~l~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~-~-~--  221 (334)
T cd08234         148 AVHGLDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR--EDPEAQ-K-E--  221 (334)
T ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC--CCHHHH-H-H--
Confidence            888887789999999999988999999999999999966788888999999999999887666433  333333 2 2  


Q ss_pred             HcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC--ccccchhhhccCcEEEeeccCCCcHHHHHHHHHcCCC
Q 017426          258 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKI  335 (372)
Q Consensus       258 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ll~~g~~  335 (372)
                      ..+.++|++||+++........+++|+++|+++.++.....  ..+....+..+++.+.+.....+.+++++++++++.+
T Consensus       222 ~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  301 (334)
T cd08234         222 DNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPYTFPRAIALLESGKI  301 (334)
T ss_pred             hcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCHHHHHHHHHHHHcCCC
Confidence            23568999999998767888999999999999999864432  2222223344677777776556778999999999998


Q ss_pred             CCCCceEEEecCChHHHHHHHHHHhcCCCceEEEE
Q 017426          336 DVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  370 (372)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv  370 (372)
                      .+.+.++++|++  +++++|++.+.+ ...+|+++
T Consensus       302 ~~~~~~~~~~~~--~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         302 DVKGLVSHRLPL--EEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             ChhhhEEEEecH--HHHHHHHHHHhc-CCceEEEe
Confidence            655556788888  999999999988 78889886

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=2e-38  Score=295.77  Aligned_cols=331  Identities=26%  Similarity=0.428  Sum_probs=269.7

Q ss_pred             ceeEEEecCCcee-EEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGVNTLK-IQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~~~l~-~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      ||++++..++... +++.|.|.|.++||+|||.++++|++|+....|...    ...|.++|+|++|+|+++|+++++|+
T Consensus         1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~~G~~v~~~~   76 (338)
T PRK09422          1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFG----DKTGRILGHEGIGIVKEVGPGVTSLK   76 (338)
T ss_pred             CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCC----CCCCccCCcccceEEEEECCCCccCC
Confidence            6888888766555 889999999999999999999999999998876432    12367899999999999999999999


Q ss_pred             ccccccCCCCCEEEEc-CCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-h
Q 017426           97 PGDRVTLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-P  174 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~  174 (372)
                      +        ||+|++. ...+|+.|++|..+..++|.+....+. ..+|+|+||+.++.++++++|+++++.+++.++ .
T Consensus        77 ~--------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~  147 (338)
T PRK09422         77 V--------GDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGY-TVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCA  147 (338)
T ss_pred             C--------CCEEEEccCCCCCCCChhhcCCCcccCCCccccCc-cccCcceeEEEEchHHeEeCCCCCCHHHeehhhcc
Confidence            9        9999865 456799999999999999987654332 457999999999999999999999999998776 6


Q ss_pred             hHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHH
Q 017426          175 LSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARA-FGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE  253 (372)
Q Consensus       175 ~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~-~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~  253 (372)
                      +.+||++++.+++++|++|||+|+|.+|++++++|+. .|+ .++++.+++++.++++++|++.++++.. ..++.+.++
T Consensus       148 ~~ta~~~~~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~v~  225 (338)
T PRK09422        148 GVTTYKAIKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR-VEDVAKIIQ  225 (338)
T ss_pred             hhHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc-cccHHHHHH
Confidence            6789999977889999999999999999999999998 598 5888889999999999999988776422 134555565


Q ss_pred             HHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-CCcHHHHHHHHHc
Q 017426          254 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRS  332 (372)
Q Consensus       254 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~~  332 (372)
                      +..   + ++|.+|.+.++...+..++++++.+|+++.+|.......+....+..+..++.+...+ .+.++++++++++
T Consensus       226 ~~~---~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  301 (338)
T PRK09422        226 EKT---G-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAE  301 (338)
T ss_pred             Hhc---C-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHh
Confidence            542   3 6885554445567899999999999999999865443444445566677777775533 5678899999999


Q ss_pred             CCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          333 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       333 g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      |.+  .+.+ ..+++  +++++|++.+.++...+|+++++
T Consensus       302 g~l--~~~v-~~~~~--~~~~~a~~~~~~~~~~gkvvv~~  336 (338)
T PRK09422        302 GKV--VPKV-QLRPL--EDINDIFDEMEQGKIQGRMVIDF  336 (338)
T ss_pred             CCC--CccE-EEEcH--HHHHHHHHHHHcCCccceEEEec
Confidence            988  3444 45777  99999999999999999999863

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=2.2e-38  Score=295.89  Aligned_cols=336  Identities=32%  Similarity=0.560  Sum_probs=271.0

Q ss_pred             ceeEEEecCC-ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      ||++++++++ .+.+.+.+.|.|.++|++|||.++++|+.|+..+.+.........+|.++|+|++|+|+.+|++++.|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~   80 (341)
T cd05281           1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK   80 (341)
T ss_pred             CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence            5777777554 699999999999999999999999999999987654211111234577899999999999999999999


Q ss_pred             ccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccchhH
Q 017426           97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS  176 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~  176 (372)
                      +        ||+|+..+..+|++|.+|..+..|+|+...+.+. ...|+|++|+.++.+.++++|++++++.++++.++.
T Consensus        81 ~--------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~a~~~~~~~  151 (341)
T cd05281          81 V--------GDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGV-DTDGCFAEYVVVPEENLWKNDKDIPPEIASIQEPLG  151 (341)
T ss_pred             C--------CCEEEECCccCCCCChHHHCcCcccCcccceEec-cCCCcceEEEEechHHcEECcCCCCHHHhhhhhHHH
Confidence            9        9999988888999999999999999987654443 457999999999999999999999987676666788


Q ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHH
Q 017426          177 VGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       177 ~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~  256 (372)
                      ++++++. ...++|++|||+|+|.+|++++|+|+.+|...++++++++++.++++++|++.++++.  ..++. .+.++.
T Consensus       152 ~a~~~~~-~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~-~~~~~~  227 (341)
T cd05281         152 NAVHTVL-AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPR--EEDVV-EVKSVT  227 (341)
T ss_pred             HHHHHHH-hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcc--cccHH-HHHHHc
Confidence            8888775 4457899999988899999999999999986677778889999999999998776543  34555 565543


Q ss_pred             HHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccch-hhhccCcEEEeeccC--CCcHHHHHHHHHcC
Q 017426          257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT-PAAVREVDVVGVFRY--KNTWPLCLELLRSG  333 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~~~~~~--~~~~~~~~~ll~~g  333 (372)
                        .++++|++||++|+......++++|+++|+++.++........... ....+.+++.+....  .+.+.++++++.++
T Consensus       228 --~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  305 (341)
T cd05281         228 --DGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSG  305 (341)
T ss_pred             --CCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcC
Confidence              3568999999998877889999999999999999854432222222 355566676665422  45678899999999


Q ss_pred             CCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          334 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      .+.+.+.+.+++++  +++++|++.+.++. .+|+|++
T Consensus       306 ~l~~~~~~~~~~~~--~~~~~a~~~~~~~~-~gk~vv~  340 (341)
T cd05281         306 KVDLSPVITHKLPL--EDFEEAFELMRSGK-CGKVVLY  340 (341)
T ss_pred             CCChhHheEEEecH--HHHHHHHHHHhcCC-CceEEec
Confidence            98655667788888  99999999999988 8999985

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-38  Score=295.63  Aligned_cols=326  Identities=26%  Similarity=0.433  Sum_probs=270.7

Q ss_pred             ceeEEEecCCc-eeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      |+++++++++. +++++.|.|.+.++|++|++.++++|+.|+....|..+   ...+|.++|+|++|+|+++|++++.++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~---~~~~~~~~g~e~~G~v~~~g~~~~~~~   77 (334)
T PRK13771          1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYP---RMKYPVILGHEVVGTVEEVGENVKGFK   77 (334)
T ss_pred             CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCC---CCCCCeeccccceEEEEEeCCCCccCC
Confidence            67888887765 99999999999999999999999999999988776432   135577899999999999999998899


Q ss_pred             ccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-hh
Q 017426           97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PL  175 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~  175 (372)
                      +        ||+|++....+|++|.+|..+..++|.....++. ...|+|++|+.++.++++++|+++++.+++.+. .+
T Consensus        78 ~--------G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~  148 (334)
T PRK13771         78 P--------GDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGE-ELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVT  148 (334)
T ss_pred             C--------CCEEEECCCCCCcCChhhcCCCcccCcccccccc-ccCceeeeeeecchhceEECCCCCCHHHhhcccchH
Confidence            9        9999998888999999999999999998777654 457999999999999999999999999988776 67


Q ss_pred             HHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHH
Q 017426          176 SVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       176 ~~a~~~l~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~  254 (372)
                      .+||++++...++++++++|+|+ |.+|++++|+++.+|++ ++++.+++++.+.++++ ++.++.+.    ++.+.+++
T Consensus       149 ~~a~~~~~~~~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~-vi~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~v~~  222 (334)
T PRK13771        149 GMVYRGLRRAGVKKGETVLVTGAGGGVGIHAIQVAKALGAK-VIAVTSSESKAKIVSKY-ADYVIVGS----KFSEEVKK  222 (334)
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHH-HHHhcCch----hHHHHHHh
Confidence            88999987668899999999998 99999999999999994 77777889999988888 66554321    34444443


Q ss_pred             HHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCc--cccchhhhccCcEEEeeccC-CCcHHHHHHHHH
Q 017426          255 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM--TVPLTPAAVREVDVVGVFRY-KNTWPLCLELLR  331 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~  331 (372)
                      +     .++|++||++|+. ....++++|+++|+++.+|......  .........+++++.+.... .+.+++++++++
T Consensus       223 ~-----~~~d~~ld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (334)
T PRK13771        223 I-----GGADIVIETVGTP-TLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVA  296 (334)
T ss_pred             c-----CCCcEEEEcCChH-HHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHH
Confidence            2     3799999999975 7889999999999999998643321  13333345577777775433 567889999999


Q ss_pred             cCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          332 SGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       332 ~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      ++.+  .+.+.+.|++  +++++|++.+.++...+|++++
T Consensus       297 ~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~  332 (334)
T PRK13771        297 EGKI--KPVIGAEVSL--SEIDKALEELKDKSRIGKILVK  332 (334)
T ss_pred             cCCC--cceEeeeEcH--HHHHHHHHHHHcCCCcceEEEe
Confidence            9998  4557788888  9999999999988888999886

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=2.9e-38  Score=294.95  Aligned_cols=329  Identities=33%  Similarity=0.609  Sum_probs=268.4

Q ss_pred             CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccccccccCCCC
Q 017426           27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPG  106 (372)
Q Consensus        27 ~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~gd~v~~~~G  106 (372)
                      ..+++.+.|.|.|.++|++|+|.++++|+.|+..+.+.........+|.++|+|++|+|+++|+++++|++        |
T Consensus         9 ~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~--------G   80 (340)
T TIGR00692         9 YGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKV--------G   80 (340)
T ss_pred             CCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCC--------C
Confidence            46788899999999999999999999999999887653211112345778999999999999999999999        9


Q ss_pred             CEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccchhHHHHHHHHhcC
Q 017426          107 DRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRAN  186 (372)
Q Consensus       107 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~  186 (372)
                      |+|+..++..|+.|..|..+..++|++..+++. ...|+|++|+.++++.++++|+++++.+|+...++.+|++++ ...
T Consensus        81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~a~~~~-~~~  158 (340)
T TIGR00692        81 DYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTV-LAG  158 (340)
T ss_pred             CEEEECCcCCCCCChhhhCcChhhCcCcceEee-cCCCcceeEEEeehHHcEECcCCCChHhhhhcchHHHHHHHH-Hcc
Confidence            999999999999999999999999999766543 367999999999999999999999987776666778888776 445


Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .++|++++|.|+|.+|++++|+++.+|++.|+++++++++.++++++|++.++++.  ..++.+.+.++.  .+.++|++
T Consensus       159 ~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~--~~~~~~~l~~~~--~~~~~d~v  234 (340)
T TIGR00692       159 PISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPF--KEDVVKEVADLT--DGEGVDVF  234 (340)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEccc--ccCHHHHHHHhc--CCCCCCEE
Confidence            68999999988899999999999999996577888889999999999998776643  356666666553  35679999


Q ss_pred             EeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccch-hhhccCcEEEeecc--CCCcHHHHHHHHHcCCCCCCCceEE
Q 017426          267 FDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT-PAAVREVDVVGVFR--YKNTWPLCLELLRSGKIDVKPLVTH  343 (372)
Q Consensus       267 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~~~~~--~~~~~~~~~~ll~~g~~~~~~~~~~  343 (372)
                      ||++|+...+...+++|+++|+++.+|.......+... .+..+.+++.+...  ..+.+.+++++++++.+.+.+.+.+
T Consensus       235 ld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~  314 (340)
T TIGR00692       235 LEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITH  314 (340)
T ss_pred             EECCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheee
Confidence            99998777888999999999999999865332233333 45667777766542  2456788999999999854455778


Q ss_pred             EecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          344 RFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       344 ~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      .+++  ++++++++.+.+++ .+|+|+++
T Consensus       315 ~~~l--~~~~~a~~~~~~~~-~gkvvv~~  340 (340)
T TIGR00692       315 KFKF--DKFEKGFELMRSGQ-TGKVILSL  340 (340)
T ss_pred             eeeH--HHHHHHHHHHhcCC-CceEEEeC
Confidence            8888  99999999998886 49999875

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=4.2e-38  Score=294.24  Aligned_cols=333  Identities=38%  Similarity=0.652  Sum_probs=275.1

Q ss_pred             ceeEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccc
Q 017426           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (372)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (372)
                      ||++++.+.+.+.+.+.+.|++.++||+||+.++++|+.|+....+.+    ....|.++|+|++|+|+++|++++.|++
T Consensus         1 ~~a~~~~~~~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~----~~~~~~~~g~~~~G~V~~~g~~v~~~~~   76 (343)
T cd08236           1 MKALVLTGPGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG----AYHPPLVLGHEFSGTVEEVGSGVDDLAV   76 (343)
T ss_pred             CeeEEEecCCceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCC----CCCCCcccCcceEEEEEEECCCCCcCCC
Confidence            578888887889999999999999999999999999999998877643    1245778999999999999999999999


Q ss_pred             cccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccchhHH
Q 017426           98 GDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV  177 (372)
Q Consensus        98 gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~~  177 (372)
                              ||+|++.+...|+.|.+|..+....|+....++. ...|+|++|+.++++.++++|+++++.++++++++.+
T Consensus        77 --------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~~t  147 (343)
T cd08236          77 --------GDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGS-RRDGAFAEYVSVPARNLIKIPDHVDYEEAAMIEPAAV  147 (343)
T ss_pred             --------CCEEEEcCCCCCCCChhHHCcChhhCCCcceEec-ccCCcccceEEechHHeEECcCCCCHHHHHhcchHHH
Confidence                    9999998888999999999999999987665553 3679999999999999999999999999988877889


Q ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHH
Q 017426          178 GVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       178 a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      ||.++..++++++++|||+|+|.+|++++|+|+.+|++.++++++++++.++++++|++.++++..  .. .+.+.+.. 
T Consensus       148 a~~~l~~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~--~~-~~~~~~~~-  223 (343)
T cd08236         148 ALHAVRLAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE--ED-VEKVRELT-  223 (343)
T ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc--cc-HHHHHHHh-
Confidence            999988888999999999988999999999999999965788888888899999999988776543  33 44554443 


Q ss_pred             HcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCc---cccchhhhccCcEEEeeccC------CCcHHHHHH
Q 017426          258 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM---TVPLTPAAVREVDVVGVFRY------KNTWPLCLE  328 (372)
Q Consensus       258 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~---~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~  328 (372)
                       .+.++|++||++|....+..++++|+++|+++.++......   ...+..+..++.++.+....      .+.++++++
T Consensus       224 -~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (343)
T cd08236         224 -EGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALD  302 (343)
T ss_pred             -CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHH
Confidence             34579999999987778899999999999999998544321   11233344667777665432      456888999


Q ss_pred             HHHcCCCCCCCceEEEecCChHHHHHHHHHHhc-CCCceEEEE
Q 017426          329 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSAR-GGTAIKVMF  370 (372)
Q Consensus       329 ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~-~~~~gkvvv  370 (372)
                      +++++.+.+.+.+.+.+++  ++++++++.+.+ ....+|+|+
T Consensus       303 ~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         303 LLASGKIKVEPLITHRLPL--EDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             HHHcCCCChHHheeeeecH--HHHHHHHHHHHcCCCCeeEEeC
Confidence            9999988533456688888  999999999988 667788875

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=1.5e-38  Score=294.95  Aligned_cols=305  Identities=21%  Similarity=0.273  Sum_probs=245.4

Q ss_pred             ceeEEEecCC------ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCC
Q 017426           18 NMAAWLLGVN------TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (372)
Q Consensus        18 ~~~~~~~~~~------~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (372)
                      ||++++++++      .+++.++|.|.|+++||+||+.++++|++|+....|.+..  ...+|.++|||++|+|+++|++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~--~~~~p~v~G~e~~G~V~~vG~~   78 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGS--TKALPVPPGFEGSGTVVAAGGG   78 (324)
T ss_pred             CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC--CCCCCcCCCcceEEEEEEECCC
Confidence            5788877543      5888899999999999999999999999999988875421  1346889999999999999999


Q ss_pred             Ccc-ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccccc
Q 017426           92 VKT-LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA  170 (372)
Q Consensus        92 v~~-~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa  170 (372)
                      +++ |++        ||+|++.+.                           .+|+|+||+.++++.++++|+++++.+++
T Consensus        79 v~~~~~v--------Gd~V~~~~~---------------------------~~g~~a~~~~v~~~~~~~iP~~~~~~~aa  123 (324)
T cd08291          79 PLAQSLI--------GKRVAFLAG---------------------------SYGTYAEYAVADAQQCLPLPDGVSFEQGA  123 (324)
T ss_pred             ccccCCC--------CCEEEecCC---------------------------CCCcchheeeecHHHeEECCCCCCHHHHh
Confidence            996 999        888875210                           14999999999999999999999999988


Q ss_pred             ccc-hhHHHHHHHHhcCCCCCCEEEEE-CC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCccc
Q 017426          171 MCE-PLSVGVHACRRANIGPETNVLIM-GA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD  247 (372)
Q Consensus       171 ~~~-~~~~a~~~l~~~~~~~g~~vlI~-Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~  247 (372)
                      .+. .+.+||.+++..+. ++++++|+ |+ |.+|++++|+|+.+|+ .++++++++++.++++++|++.++++..  .+
T Consensus       124 ~~~~~~~ta~~~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~  199 (324)
T cd08291         124 SSFVNPLTALGMLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEYVLNSSD--PD  199 (324)
T ss_pred             hhcccHHHHHHHHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEECCC--cc
Confidence            654 55677766655655 56677775 54 9999999999999999 5788889999999999999999887543  56


Q ss_pred             HHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-c-cccchhhhccCcEEEeeccC------
Q 017426          248 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-M-TVPLTPAAVREVDVVGVFRY------  319 (372)
Q Consensus       248 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-~~~~~~~~~~~~~i~~~~~~------  319 (372)
                      +.+.++++.  .+.++|++||++|+. .....+.+++++|+++.+|..... . .++...+..+++++.++...      
T Consensus       200 ~~~~v~~~~--~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (324)
T cd08291         200 FLEDLKELI--AKLNATIFFDAVGGG-LTGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKL  276 (324)
T ss_pred             HHHHHHHHh--CCCCCcEEEECCCcH-HHHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhccc
Confidence            777776664  356899999999985 667789999999999999854322 1 24345566788888876543      


Q ss_pred             -CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          320 -KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       320 -~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                       .+.+++++++++ +.+  .+.++++|++  +++++|++.+.++...||+++.
T Consensus       277 ~~~~~~~~~~~~~-~~~--~~~i~~~~~l--~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         277 GPEVVKKLKKLVK-TEL--KTTFASRYPL--ALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             CHHHHHHHHHHHh-Ccc--ccceeeEEcH--HHHHHHHHHHHhCCCCCeEEeC
Confidence             235778888887 776  7788899999  9999999999999899999873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=8.7e-38  Score=291.37  Aligned_cols=333  Identities=32%  Similarity=0.535  Sum_probs=277.1

Q ss_pred             ceeEEEecCCc--eeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccc
Q 017426           18 NMAAWLLGVNT--LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (372)
Q Consensus        18 ~~~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (372)
                      ||++++..+..  +.+.+.|.|.+.+++|+|++.++++|+.|+....|...  ....+|.++|+|++|+|+++|+++++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~--~~~~~~~~~g~~~~G~v~~~G~~v~~~   78 (338)
T cd08254           1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVP--TLTKLPLTLGHEIAGTVVEVGAGVTNF   78 (338)
T ss_pred             CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCc--ccCCCCEeccccccEEEEEECCCCccC
Confidence            57888885543  57788889999999999999999999999998877543  123457789999999999999999999


Q ss_pred             cccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-h
Q 017426           96 VPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-P  174 (372)
Q Consensus        96 ~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~  174 (372)
                      ++        ||+|+.++..+|++|.+|+.++.++|.+....+. ...|+|++|+.++.+.++++|+++++.+++.+. .
T Consensus        79 ~~--------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~  149 (338)
T cd08254          79 KV--------GDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGL-GIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDA  149 (338)
T ss_pred             CC--------CCEEEECCCCCCCCChhhhCcCcccCCCCCcccc-ccCCcceeeEEechHHeEECCCCCCHHHhhhhcch
Confidence            99        9999999999999999999999999976655444 467999999999999999999999999988775 7


Q ss_pred             hHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHH
Q 017426          175 LSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE  253 (372)
Q Consensus       175 ~~~a~~~l~~-~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~  253 (372)
                      +.+||+++.. .+++++++|||.|+|.+|++++++|+.+|++ ++++++++++.+.++++|++.++...  ..++.+.+ 
T Consensus       150 ~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~~-V~~~~~s~~~~~~~~~~g~~~~~~~~--~~~~~~~~-  225 (338)
T cd08254         150 VLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGAA-VIAVDIKEEKLELAKELGADEVLNSL--DDSPKDKK-  225 (338)
T ss_pred             HHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHhCCCEEEcCC--CcCHHHHH-
Confidence            8899999854 6799999999988899999999999999995 78888899999999999998776533  23444444 


Q ss_pred             HHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-CCcHHHHHHHHHc
Q 017426          254 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRS  332 (372)
Q Consensus       254 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~~  332 (372)
                      ..  ..+.++|++||++|....+..++++|+++|+++.++.......+....+..++.++.++... .+.+..+++++++
T Consensus       226 ~~--~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  303 (338)
T cd08254         226 AA--GLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAK  303 (338)
T ss_pred             HH--hcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHc
Confidence            22  24678999999998777889999999999999999865544444555566777777776544 5678899999999


Q ss_pred             CCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          333 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       333 g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +.+.+  . .+++++  ++++++++.+.+++..+|+++++
T Consensus       304 ~~l~~--~-~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         304 GKLDP--Q-VETRPL--DEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             CCCcc--c-ceeEcH--HHHHHHHHHHHcCCccceEEEeC
Confidence            99843  3 567888  99999999999999999999874

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1e-37  Score=291.40  Aligned_cols=334  Identities=29%  Similarity=0.443  Sum_probs=277.7

Q ss_pred             ceeEEEecCC--ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccc
Q 017426           18 NMAAWLLGVN--TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (372)
Q Consensus        18 ~~~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (372)
                      ||++++.+++  .+.+.+++.|.|.++|++|++.++++|+.|+....|.....  ...|.++|+|++|+|+++|++++.|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~V~~vG~~~~~~   78 (341)
T cd08297           1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVK--PKLPLIGGHEGAGVVVAVGPGVSGL   78 (341)
T ss_pred             CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcC--CCCCccCCcccceEEEEeCCCCCCC
Confidence            6888887655  89999999999999999999999999999998887654221  3446789999999999999999999


Q ss_pred             cccccccCCCCCEEEEcC-CcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-
Q 017426           96 VPGDRVTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        96 ~~gd~v~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-  173 (372)
                      ++        ||+|+..+ ...|+.|.+|..++.++|++....+. ...|+|++|+.++++.++++|+++++.+++.+. 
T Consensus        79 ~~--------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~  149 (341)
T cd08297          79 KV--------GDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGY-TVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLC  149 (341)
T ss_pred             CC--------CCEEEEecCCCCCCCCccccCCCcccCCCcccccc-ccCCcceeEEEeccccEEECCCCCCHHHHHHHHc
Confidence            99        99888764 56799999999999999988766654 457999999999999999999999999988765 


Q ss_pred             hhHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHH
Q 017426          174 PLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV  252 (372)
Q Consensus       174 ~~~~a~~~l~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~  252 (372)
                      .+.+||++++..++++++++||+|+ +.+|++++++|+++|+ .++++.+++++.+.++++|++.++++..  .++.+.+
T Consensus       150 ~~~ta~~~~~~~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~  226 (341)
T cd08297         150 AGVTVYKALKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKK--SDDVEAV  226 (341)
T ss_pred             chHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCCC--ccHHHHH
Confidence            6788999987778999999999987 7799999999999999 5788888899999999999988876543  3666666


Q ss_pred             HHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-ccccchhhhccCcEEEeeccC-CCcHHHHHHHH
Q 017426          253 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELL  330 (372)
Q Consensus       253 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll  330 (372)
                      .++.  .+.++|++||+.++......++++++++|+++.++..... .++....+..++.++.+.... .+.++++++++
T Consensus       227 ~~~~--~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (341)
T cd08297         227 KELT--GGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFA  304 (341)
T ss_pred             HHHh--cCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHH
Confidence            6554  3568999999877777889999999999999999865432 234444455778888775443 46789999999


Q ss_pred             HcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          331 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       331 ~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +++.+.  +.+ ..|++  ++++++++.+..+...+|++++|
T Consensus       305 ~~~~l~--~~~-~~~~~--~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         305 ARGKVK--PHI-QVVPL--EDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             HcCCCc--cee-EEEcH--HHHHHHHHHHHcCCccceEEEeC
Confidence            999983  333 56777  99999999999998999999986

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=2.6e-38  Score=269.52  Aligned_cols=315  Identities=21%  Similarity=0.279  Sum_probs=246.3

Q ss_pred             cccchhcceeEEEe----cCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEE
Q 017426           11 KEDGEEVNMAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE   86 (372)
Q Consensus        11 ~~~~~~~~~~~~~~----~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~   86 (372)
                      .+.++...|++++.    +...+++.+++.|+...++|+||..|+.|||+|+..++|.|+..  ..+|.+-|+|++|+|+
T Consensus        13 a~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvr--P~~PAVgGnEGv~eVv   90 (354)
T KOG0025|consen   13 ASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVR--PELPAVGGNEGVGEVV   90 (354)
T ss_pred             ccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCC--CCCCcccCCcceEEEE
Confidence            33445556887777    23688999999999988889999999999999999999988654  3568999999999999


Q ss_pred             EecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCc
Q 017426           87 KVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSL  166 (372)
Q Consensus        87 ~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~  166 (372)
                      .+|+++++|++        ||+|....                           ...|+|++|.+.+++.+++++..+++
T Consensus        91 ~vGs~vkgfk~--------Gd~VIp~~---------------------------a~lGtW~t~~v~~e~~Li~vd~~~pl  135 (354)
T KOG0025|consen   91 AVGSNVKGFKP--------GDWVIPLS---------------------------ANLGTWRTEAVFSESDLIKVDKDIPL  135 (354)
T ss_pred             EecCCcCccCC--------CCeEeecC---------------------------CCCccceeeEeecccceEEcCCcCCh
Confidence            99999999999        66665421                           34599999999999999999999999


Q ss_pred             ccccccc-hhHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh---hHHHHHHHhCCCeEEe
Q 017426          167 EEGAMCE-PLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD---YRLSVAKEIGADNIVK  240 (372)
Q Consensus       167 ~~aa~~~-~~~~a~~~l~~-~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~---~~~~~~~~lg~~~v~~  240 (372)
                      +.||++. ..+|||++|+. .++++||+|+-.|| +++|++.+|+|+++|++.+-++...+   +-.+.++.+||++|+.
T Consensus       136 ~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViT  215 (354)
T KOG0025|consen  136 ASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVIT  215 (354)
T ss_pred             hhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEec
Confidence            9999998 56789999965 88999999888898 99999999999999998766664333   2344567799999985


Q ss_pred             cCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEc-CCCCCccccchhhhccCcEEEeeccC
Q 017426          241 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVFRY  319 (372)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g-~~~~~~~~~~~~~~~~~~~i~~~~~~  319 (372)
                      -++    +.+.-............+.|||+|+. ......+.|..+|+.+++| +...+...+...++++.+.++|++..
T Consensus       216 eee----l~~~~~~k~~~~~~~prLalNcVGGk-sa~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt  290 (354)
T KOG0025|consen  216 EEE----LRDRKMKKFKGDNPRPRLALNCVGGK-SATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVT  290 (354)
T ss_pred             HHH----hcchhhhhhhccCCCceEEEeccCch-hHHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeee
Confidence            322    11111111111245799999999996 6678889999999999998 56677889999999999999999753


Q ss_pred             ------------CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcC-CCceEEEEe
Q 017426          320 ------------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFN  371 (372)
Q Consensus       320 ------------~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~-~~~gkvvv~  371 (372)
                                  .+.+.++.+|++.|++  ..+..+..++  ++...|++..... ...+|.++.
T Consensus       291 ~W~~~~~~pe~~~~~i~~~~~l~~~G~i--~~~~~e~v~L--~~~~tald~~L~~~~~~~Kq~i~  351 (354)
T KOG0025|consen  291 RWKKEHKSPEERKEMIDELCDLYRRGKL--KAPNCEKVPL--ADHKTALDAALSKFGKSGKQIIV  351 (354)
T ss_pred             ehhhccCCcHHHHHHHHHHHHHHHcCee--ccccceeeec--hhhhHHHHHHHHHhccCCceEEE
Confidence                        1356788999999999  4444455567  7777777753322 233465554

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.1e-37  Score=286.06  Aligned_cols=327  Identities=32%  Similarity=0.536  Sum_probs=268.9

Q ss_pred             ceeEEEec-CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~-~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      |+++++.. ++.+.+.+.|.|.+.++||+|+|+++++|+.|+....|....   ...|.++|+|++|+|+++|++++.|+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~~G~~v~~~~   77 (332)
T cd08259           1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR---GKYPLILGHEIVGTVEEVGEGVERFK   77 (332)
T ss_pred             CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC---CCCCeeccccceEEEEEECCCCccCC
Confidence            57778775 678899999999999999999999999999999988764321   34578999999999999999999999


Q ss_pred             ccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-hh
Q 017426           97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PL  175 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~  175 (372)
                      +        ||+|++..+..|+.|.+|..+..++|++...++ ....|+|++|+.++.+.++++|+++++++++.+. .+
T Consensus        78 ~--------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~  148 (332)
T cd08259          78 P--------GDRVILYYYIPCGKCEYCLSGEENLCRNRAEYG-EEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVV  148 (332)
T ss_pred             C--------CCEEEECCCCCCcCChhhhCCCcccCCCccccc-cccCCeeeeEEEechhheEECCCCCCHHHHhhhccHH
Confidence            9        999999999999999999999999998764333 3457999999999999999999999999888776 77


Q ss_pred             HHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHH
Q 017426          176 SVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       176 ~~a~~~l~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~  254 (372)
                      .+||++++.+++++++++||+|+ |.+|++++++++..|++ ++++.+++++.+.+++++.+.+++.+    ++.+.+.+
T Consensus       149 ~ta~~~l~~~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~  223 (332)
T cd08259         149 GTAVHALKRAGVKKGDTVLVTGAGGGVGIHAIQLAKALGAR-VIAVTRSPEKLKILKELGADYVIDGS----KFSEDVKK  223 (332)
T ss_pred             HHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHcCCcEEEecH----HHHHHHHh
Confidence            88999987788999999999987 99999999999999995 67777888888888888987665422    14444443


Q ss_pred             HHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCcc-ccchhhhccCcEEEeeccC-CCcHHHHHHHHHc
Q 017426          255 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT-VPLTPAAVREVDVVGVFRY-KNTWPLCLELLRS  332 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~~  332 (372)
                      .     .++|++|+++|.. ....+++.++++|+++.++....... ........+...+.+.... .+.++++++++++
T Consensus       224 ~-----~~~d~v~~~~g~~-~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (332)
T cd08259         224 L-----GGADVVIELVGSP-TIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKE  297 (332)
T ss_pred             c-----cCCCEEEECCChH-HHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHc
Confidence            2     3799999999975 67889999999999999875433211 2233334566666665433 5678899999999


Q ss_pred             CCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          333 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       333 g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      +.+  .+.++++|++  +++++|++.+.++...+|++++
T Consensus       298 ~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         298 GKI--KPVIDRVVSL--EDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             CCC--ccceeEEEcH--HHHHHHHHHHHcCCcccEEEeC
Confidence            988  4557788888  9999999999999888999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=2.1e-38  Score=287.60  Aligned_cols=260  Identities=25%  Similarity=0.398  Sum_probs=219.7

Q ss_pred             ccccceeEEEEEecCCCc------cccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC------CCC
Q 017426           76 VIGHECAGVIEKVGSEVK------TLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------PVH  143 (372)
Q Consensus        76 ~~G~e~~G~V~~vG~~v~------~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~  143 (372)
                      ++|||++|+|+++|++|+      +|++        ||||.+.+..+|+.|++|..+++++|++...++..      ..+
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~--------GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~   72 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRL--------GQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLS   72 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCC--------CCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCcccc
Confidence            589999999999999999      8999        99999999999999999999999999988776532      247


Q ss_pred             CcceeEEEecCC-ceEECCCCCCcccccccc-hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEe
Q 017426          144 GSLANQVVHPAD-LCFKLPDNVSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD  221 (372)
Q Consensus       144 g~~~e~~~v~~~-~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~  221 (372)
                      |+|+||+.+|++ +++++|+++++++++.+. .+.++|++++.....+|++|||+|+|++|++++|+|+.+|+++|++++
T Consensus        73 G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~  152 (280)
T TIGR03366        73 GGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAAD  152 (280)
T ss_pred             ccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEC
Confidence            999999999997 799999999999998776 567899999877777999999999999999999999999997688888


Q ss_pred             cChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCC--CCc
Q 017426          222 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH--HEM  299 (372)
Q Consensus       222 ~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~  299 (372)
                      ++++|.++++++|++.++++.    +..+.+++++  .+.++|++||++|.+..++.++++++++|+++.+|...  ...
T Consensus       153 ~~~~r~~~a~~~Ga~~~i~~~----~~~~~~~~~~--~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~  226 (280)
T TIGR03366       153 PSPDRRELALSFGATALAEPE----VLAERQGGLQ--NGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPV  226 (280)
T ss_pred             CCHHHHHHHHHcCCcEecCch----hhHHHHHHHh--CCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCce
Confidence            999999999999998877532    2233344432  35689999999998888999999999999999999643  233


Q ss_pred             cccchhhhccCcEEEeeccC-CCcHHHHHHHHHcC--CCCCCCceEEEecCChHH
Q 017426          300 TVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG--KIDVKPLVTHRFGFSQKE  351 (372)
Q Consensus       300 ~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~~g--~~~~~~~~~~~~~~~~~~  351 (372)
                      .++...+..+++++.++..+ .++++++++++.++  .+.+.++++++|++  ++
T Consensus       227 ~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l--~~  279 (280)
T TIGR03366       227 ALDPEQVVRRWLTIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPL--AD  279 (280)
T ss_pred             eeCHHHHHhCCcEEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhccccc--cc
Confidence            55666788899999998765 46799999999985  55556778898888  65

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-37  Score=287.54  Aligned_cols=304  Identities=17%  Similarity=0.187  Sum_probs=239.6

Q ss_pred             cceeEEEe-------cCCceeEEE---ecCCC-CCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCccccc--ceeE
Q 017426           17 VNMAAWLL-------GVNTLKIQP---FELPS-LGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH--ECAG   83 (372)
Q Consensus        17 ~~~~~~~~-------~~~~l~~~~---~~~p~-~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~--e~~G   83 (372)
                      ++|+.++.       .++.|++.+   .+.|. ++++||||||.++++||.|+..+.+...   ....|.++|+  +++|
T Consensus         8 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~---~~~~p~~~G~~~~~~G   84 (348)
T PLN03154          8 ENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD---SYLPPFVPGQRIEGFG   84 (348)
T ss_pred             cceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC---CCCCCcCCCCeeEeeE
Confidence            35666654       235688876   46664 4899999999999999998765433211   1235788997  8899


Q ss_pred             EEEEecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCc--eEE--
Q 017426           84 VIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL--CFK--  159 (372)
Q Consensus        84 ~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~--~~~--  159 (372)
                      +|..+|+++++|++        ||+|+.                               .|+|+||+.++.+.  +++  
T Consensus        85 ~v~~vg~~v~~~~~--------Gd~V~~-------------------------------~~~~aey~~v~~~~~~~~~~~  125 (348)
T PLN03154         85 VSKVVDSDDPNFKP--------GDLISG-------------------------------ITGWEEYSLIRSSDNQLRKIQ  125 (348)
T ss_pred             EEEEEecCCCCCCC--------CCEEEe-------------------------------cCCcEEEEEEeccccceEEcc
Confidence            99999999999999        888864                               37899999999853  544  


Q ss_pred             CCCCCCcc-cccccc-hhHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-HhC
Q 017426          160 LPDNVSLE-EGAMCE-PLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIG  234 (372)
Q Consensus       160 ~P~~~~~~-~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~lg  234 (372)
                      +|+++++. +|+.++ .+.|||+++. .+++++|++|||+|+ |++|++++|+|+.+|+ .|+++++++++.++++ ++|
T Consensus       126 ~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k~~~~~~~lG  204 (348)
T PLN03154        126 LQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLG  204 (348)
T ss_pred             CcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhcC
Confidence            48999986 565555 7789999985 588999999999998 9999999999999999 5788888999999887 799


Q ss_pred             CCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-c-----cccchhhhc
Q 017426          235 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-M-----TVPLTPAAV  308 (372)
Q Consensus       235 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-----~~~~~~~~~  308 (372)
                      ++.++++.. ..++.+.++++.   ++++|++||++|+ ..+..++++++++|+++.+|..... .     .++...+..
T Consensus       205 a~~vi~~~~-~~~~~~~i~~~~---~~gvD~v~d~vG~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~  279 (348)
T PLN03154        205 FDEAFNYKE-EPDLDAALKRYF---PEGIDIYFDNVGG-DMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLIS  279 (348)
T ss_pred             CCEEEECCC-cccHHHHHHHHC---CCCcEEEEECCCH-HHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhh
Confidence            999987643 135666666553   4589999999997 4889999999999999999864321 1     123345677


Q ss_pred             cCcEEEeeccC------CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          309 REVDVVGVFRY------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       309 ~~~~i~~~~~~------~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +++++.++..+      .+.++++++++++|++  ++.+..+|++  +++++|++.+.+++..||+|+++
T Consensus       280 k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l--~~~~~~~~~L--~~~~~A~~~l~~g~~~GKvVl~~  345 (348)
T PLN03154        280 KRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKI--VYIEDMSEGL--ESAPAALVGLFSGKNVGKQVIRV  345 (348)
T ss_pred             ccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCc--cCceecccCH--HHHHHHHHHHHcCCCCceEEEEe
Confidence            88888887543      2457889999999999  5567677888  99999999999999999999874

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2e-36  Score=281.32  Aligned_cols=320  Identities=25%  Similarity=0.382  Sum_probs=261.8

Q ss_pred             ceeEEEecCC-----ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCC
Q 017426           18 NMAAWLLGVN-----TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (372)
Q Consensus        18 ~~~~~~~~~~-----~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (372)
                      |++.++.+++     .+++.+.+.|.+.++||+||+.++++|++|+....|..+.   ...|.++|+|++|+|+++|+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v   77 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP---PKLPLIPGHEIVGRVEAVGPGV   77 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC---CCCCccccccccEEEEEECCCC
Confidence            5677777555     6888888888899999999999999999999988764321   3457899999999999999999


Q ss_pred             ccccccccccCCCCCEEEEc-CCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccc
Q 017426           93 KTLVPGDRVTLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAM  171 (372)
Q Consensus        93 ~~~~~gd~v~~~~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~  171 (372)
                      ++|++        ||+|.+. ...+|+.|++|..+..++|..+.+++. ..+|+|++|+.++.+.++++|+++++.+++.
T Consensus        78 ~~~~~--------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~  148 (329)
T cd08298          78 TRFSV--------GDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGY-TVDGGYAEYMVADERFAYPIPEDYDDEEAAP  148 (329)
T ss_pred             CCCcC--------CCEEEEeccCCCCCCChhHhCcChhhCCCcccccc-ccCCceEEEEEecchhEEECCCCCCHHHhhH
Confidence            99999        8888664 456899999999999999998887765 3579999999999999999999999999886


Q ss_pred             cc-hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHH
Q 017426          172 CE-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE  250 (372)
Q Consensus       172 ~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~  250 (372)
                      +. .+.+||++++.+++++++++||+|+|.+|++++++++..|+ .++++.+++++.+.++++|++.++++...      
T Consensus       149 ~~~~~~ta~~~~~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~------  221 (329)
T cd08298         149 LLCAGIIGYRALKLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGDSDDL------  221 (329)
T ss_pred             hhhhhHHHHHHHHhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEeccCcc------
Confidence            65 77889999977999999999999889999999999999998 57888888899999999999876654321      


Q ss_pred             HHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCc-cccchhhhccCcEEEeeccC-CCcHHHHHH
Q 017426          251 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY-KNTWPLCLE  328 (372)
Q Consensus       251 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~  328 (372)
                              .+.++|+++++.+....++.++++++++|+++.++...... ..+... ..+...+.+.... .+.++++++
T Consensus       222 --------~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~  292 (329)
T cd08298         222 --------PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYEL-LWGEKTIRSVANLTRQDGEEFLK  292 (329)
T ss_pred             --------CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhh-hhCceEEEEecCCCHHHHHHHHH
Confidence                    13579999998776678999999999999999987532211 112222 3345556555443 456888999


Q ss_pred             HHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEE
Q 017426          329 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  370 (372)
Q Consensus       329 ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv  370 (372)
                      +++++.+.  + ..++|++  +++++|++.+.+++..+|+++
T Consensus       293 l~~~~~l~--~-~~~~~~~--~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         293 LAAEIPIK--P-EVETYPL--EEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             HHHcCCCC--c-eEEEEeH--HHHHHHHHHHHcCCCcceeeC
Confidence            99999884  3 3578888  999999999999989999874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=8.5e-37  Score=285.66  Aligned_cols=299  Identities=19%  Similarity=0.249  Sum_probs=226.4

Q ss_pred             CCceeEEEecCCCC-CCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccccccccCC
Q 017426           26 VNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLV  104 (372)
Q Consensus        26 ~~~l~~~~~~~p~~-~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~gd~v~~~  104 (372)
                      ++.+++.+.|.|.| +++||+|||+++|+||.|+..............+|.++|+|++|+|+++|++|++|++       
T Consensus        20 ~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~-------   92 (345)
T cd08293          20 AENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAV-------   92 (345)
T ss_pred             ccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCC-------
Confidence            36789999999987 4999999999999999986433211100111346789999999999999999999999       


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccc-----ccccchhHHHH
Q 017426          105 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE-----GAMCEPLSVGV  179 (372)
Q Consensus       105 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~-----aa~~~~~~~a~  179 (372)
                       ||+|+..                              .++|+||+.++++.++++|+++++.+     ++...++.+||
T Consensus        93 -Gd~V~~~------------------------------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~  141 (345)
T cd08293          93 -GDIVTSF------------------------------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTAL  141 (345)
T ss_pred             -CCEEEec------------------------------CCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHH
Confidence             8888741                              15799999999999999999864432     23334788999


Q ss_pred             HHHH-hcCCCCC--CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH-hCCCeEEecCCCcccHHHHHHH
Q 017426          180 HACR-RANIGPE--TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       180 ~~l~-~~~~~~g--~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~~~~  254 (372)
                      +++. .+++++|  ++|||+|+ |++|++++|+|+++|+..|+++++++++.+++++ +|++.++++..  .++.+.+++
T Consensus       142 ~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~--~~~~~~i~~  219 (345)
T cd08293         142 IGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT--DNVAERLRE  219 (345)
T ss_pred             HHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC--CCHHHHHHH
Confidence            9984 5778877  99999997 9999999999999998558888888999888876 99999887543  567777776


Q ss_pred             HHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC---Ccc--ccc----hhhh-ccCcEEEeecc--C---
Q 017426          255 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH---EMT--VPL----TPAA-VREVDVVGVFR--Y---  319 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~--~~~----~~~~-~~~~~i~~~~~--~---  319 (372)
                      +.   ++++|++||++|+. .+..++++|+++|+++.+|....   ...  ...    ..+. .+.+.......  .   
T Consensus       220 ~~---~~gvd~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (345)
T cd08293         220 LC---PEGVDVYFDNVGGE-ISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDK  295 (345)
T ss_pred             HC---CCCceEEEECCCcH-HHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhH
Confidence            53   46899999999985 67899999999999999884221   111  111    1111 22333322211  1   


Q ss_pred             -CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          320 -KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       320 -~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                       .+.++++++++++|.+.  +.....+++  +++++|++.+.+++..||+|+++
T Consensus       296 ~~~~~~~~~~l~~~g~i~--~~~~~~~~l--~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         296 FEEAIAQLSQWVKEGKLK--VKETVYEGL--ENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             HHHHHHHHHHHHHCCCcc--ceeEEeecH--HHHHHHHHHHhcCCCCCeEEEEC
Confidence             23467788999999984  334455677  99999999999998899999975

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=1.7e-36  Score=282.78  Aligned_cols=296  Identities=19%  Similarity=0.182  Sum_probs=234.9

Q ss_pred             CCceeEEEecC----CCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccce--eEEEEEecCCCccccccc
Q 017426           26 VNTLKIQPFEL----PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHEC--AGVIEKVGSEVKTLVPGD   99 (372)
Q Consensus        26 ~~~l~~~~~~~----p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~--~G~V~~vG~~v~~~~~gd   99 (372)
                      ++.|++.+.++    |+|+++||||||+++++||.|++...|.+..  ....|.++|+++  .|.+..+|+++++|++  
T Consensus        18 ~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~--~~~~p~~~g~~~~g~~~~~~v~~~v~~~~v--   93 (338)
T cd08295          18 ESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS--LYLPPFKPGEVITGYGVAKVVDSGNPDFKV--   93 (338)
T ss_pred             ccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCcc--ccCCCcCCCCeEeccEEEEEEecCCCCCCC--
Confidence            46789998877    7899999999999999999999988874321  124577888754  4555557888889999  


Q ss_pred             cccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecC-CceEECC-CCCCcc-cccccc-hh
Q 017426          100 RVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA-DLCFKLP-DNVSLE-EGAMCE-PL  175 (372)
Q Consensus       100 ~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~-~~~~~~P-~~~~~~-~aa~~~-~~  175 (372)
                            ||+|+.                               .|+|+||+.+++ +.++++| +++++. +++.+. ++
T Consensus        94 ------Gd~V~~-------------------------------~g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~  136 (338)
T cd08295          94 ------GDLVWG-------------------------------FTGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPG  136 (338)
T ss_pred             ------CCEEEe-------------------------------cCCceeEEEecchhceeecCCCCCCHHHHHHhcccHH
Confidence                  888864                               378999999999 7999995 678875 566555 77


Q ss_pred             HHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH-hCCCeEEecCCCcccHHHHH
Q 017426          176 SVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEV  252 (372)
Q Consensus       176 ~~a~~~l~-~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~~  252 (372)
                      .|||+++. .+++++|++|||+|+ |++|++++|+|+.+|+ .++++.+++++.+++++ +|++.+++++. ..++.+.+
T Consensus       137 ~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~i  214 (338)
T cd08295         137 LTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKE-EPDLDAAL  214 (338)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCC-cccHHHHH
Confidence            89999985 588999999999997 9999999999999999 57888888999999988 99998887543 23666666


Q ss_pred             HHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCc------cccchhhhccCcEEEeeccC------C
Q 017426          253 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM------TVPLTPAAVREVDVVGVFRY------K  320 (372)
Q Consensus       253 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~------~~~~~~~~~~~~~i~~~~~~------~  320 (372)
                      ++..   +.++|++||++|+ ..+..++++++++|+++.+|......      ..+...+..+.+++.++...      .
T Consensus       215 ~~~~---~~gvd~v~d~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  290 (338)
T cd08295         215 KRYF---PNGIDIYFDNVGG-KMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYP  290 (338)
T ss_pred             HHhC---CCCcEEEEECCCH-HHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHH
Confidence            5543   4689999999997 58899999999999999998543211      12334566677787775432      2


Q ss_pred             CcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          321 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       321 ~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +.++++++++.+|.+.  +.+...|++  +++++|++.+.+++..||+|+++
T Consensus       291 ~~~~~~~~l~~~g~l~--~~~~~~~~l--~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         291 EFLEEMSGYIKEGKLK--YVEDIADGL--ESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             HHHHHHHHHHHCCCeE--ceeecccCH--HHHHHHHHHHhcCCCCceEEEEC
Confidence            3478889999999984  445566777  99999999999998899999975

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=2.7e-36  Score=279.70  Aligned_cols=306  Identities=25%  Similarity=0.292  Sum_probs=247.9

Q ss_pred             ceeEEEecCC----ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCc
Q 017426           18 NMAAWLLGVN----TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (372)
Q Consensus        18 ~~~~~~~~~~----~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (372)
                      ||++++.+++    .+++.++|.|.+.++||+|||.++++|+.|+..+.|....  ....|.++|+|++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~--~~~~p~~~G~e~~G~V~~~G~~v~   78 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGY--KPELPAIGGSEAVGVVDAVGEGVK   78 (324)
T ss_pred             CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC--CCCCCCCCCcceEEEEEEeCCCCC
Confidence            5788877553    4888999999999999999999999999999988775421  123578999999999999999999


Q ss_pred             cccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc
Q 017426           94 TLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE  173 (372)
Q Consensus        94 ~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~  173 (372)
                      +|++        ||+|++.                            ...|+|++|+.++++.++++|+++++++++.++
T Consensus        79 ~~~~--------Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~  122 (324)
T cd08292          79 GLQV--------GQRVAVA----------------------------PVHGTWAEYFVAPADGLVPLPDGISDEVAAQLI  122 (324)
T ss_pred             CCCC--------CCEEEec----------------------------cCCCcceeEEEEchHHeEECCCCCCHHHhhhcc
Confidence            9999        8888752                            125999999999999999999999999998776


Q ss_pred             -hhHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHH
Q 017426          174 -PLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE  251 (372)
Q Consensus       174 -~~~~a~~~l~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~  251 (372)
                       .+.+||++++.+++++|++|||+|+ |.+|++++|+|+++|++ ++++..++++.+.++++|++.++++  ...++.+.
T Consensus       123 ~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~-v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~  199 (324)
T cd08292         123 AMPLSALMLLDFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGIN-VINLVRRDAGVAELRALGIGPVVST--EQPGWQDK  199 (324)
T ss_pred             ccHHHHHHHHHhhCCCCCCEEEEcccccHHHHHHHHHHHHCCCe-EEEEecCHHHHHHHHhcCCCEEEcC--CCchHHHH
Confidence             5677888887788999999999987 99999999999999995 6666677777888888998877654  33567666


Q ss_pred             HHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC-CccccchhhhccCcEEEeeccC-----------
Q 017426          252 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-----------  319 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-----------  319 (372)
                      +.++.  .+.++|++||++|+. ....++++++++|+++.+|.... ...+.......++.++.++...           
T Consensus       200 i~~~~--~~~~~d~v~d~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (324)
T cd08292         200 VREAA--GGAPISVALDSVGGK-LAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYR  276 (324)
T ss_pred             HHHHh--CCCCCcEEEECCCCh-hHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHH
Confidence            76654  356899999999985 77889999999999999986432 2233444455678887776532           


Q ss_pred             CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          320 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       320 ~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      .+.++++++++++|.+.  +.+.++|++  +++.+|++.+.++...+|++++
T Consensus       277 ~~~~~~~~~l~~~g~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         277 KRMIAELLTLALKGQLL--LPVEAVFDL--GDAAKAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             HHHHHHHHHHHHCCCcc--CccccEecH--HHHHHHHHHHHcCCCCceEEeC
Confidence            23678899999999984  334677888  9999999999888888899874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.3e-36  Score=278.44  Aligned_cols=334  Identities=30%  Similarity=0.477  Sum_probs=271.8

Q ss_pred             ceeEEEe---cCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           18 NMAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        18 ~~~~~~~---~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      ||++++.   .+..+.+.+.+.|.+.+++|+|++.++++|++|+....|....  ...+|.++|||++|+|+++|++++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~G~~~~~   78 (342)
T cd08266           1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGI--KLPLPHILGSDGAGVVEAVGPGVTN   78 (342)
T ss_pred             CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCC--CCCCCeecccceEEEEEEeCCCCCC
Confidence            5788877   4467888888888889999999999999999999988764321  1355789999999999999999999


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-  173 (372)
                      |++        ||+|++.+...|+.|.+|..+.+++|....+.+. ...|+|++|+.++.+.++++|+++++.+++.++ 
T Consensus        79 ~~~--------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~  149 (342)
T cd08266          79 VKP--------GQRVVIYPGISCGRCEYCLAGRENLCAQYGILGE-HVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPL  149 (342)
T ss_pred             CCC--------CCEEEEccccccccchhhcccccccccccccccc-ccCcceeEEEEechHHceeCCCCCCHHHHHhhhh
Confidence            999        9999999999999999999999999987655543 357999999999999999999999999888776 


Q ss_pred             hhHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHH
Q 017426          174 PLSVGVHAC-RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE  251 (372)
Q Consensus       174 ~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~  251 (372)
                      .+.+|++++ +..+++++++++|+|+ +.+|++++++++..|++ ++.+++++++.+.++.++.+.+++.  ...++.+.
T Consensus       150 ~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  226 (342)
T cd08266         150 TFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGAT-VIATAGSEDKLERAKELGADYVIDY--RKEDFVRE  226 (342)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCCeEEec--CChHHHHH
Confidence            567899887 4588899999999987 79999999999999995 7777788888888888887665542  33455555


Q ss_pred             HHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-ccccchhhhccCcEEEeeccC-CCcHHHHHHH
Q 017426          252 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-KNTWPLCLEL  329 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~l  329 (372)
                      +.+..  .+.++|+++++.|. ..+...+++++++|+++.++..... ..........++..+.+.... ...+.+++++
T Consensus       227 ~~~~~--~~~~~d~~i~~~g~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (342)
T cd08266         227 VRELT--GKRGVDVVVEHVGA-ATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRL  303 (342)
T ss_pred             HHHHh--CCCCCcEEEECCcH-HHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHH
Confidence            54433  24579999999997 4788999999999999999754332 223333345667777776543 4578889999


Q ss_pred             HHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          330 LRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       330 l~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ++++.+  .+.+++.|++  +++++|++.+.++...+|++++.
T Consensus       304 l~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         304 VFRGKL--KPVIDSVFPL--EEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             HHcCCc--ccceeeeEcH--HHHHHHHHHHHhCCCCceEEEeC
Confidence            999987  4557788888  99999999998888889999863

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.4e-36  Score=278.55  Aligned_cols=318  Identities=27%  Similarity=0.411  Sum_probs=256.5

Q ss_pred             ceeEEEecC--CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccc
Q 017426           18 NMAAWLLGV--NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (372)
Q Consensus        18 ~~~~~~~~~--~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (372)
                      ||++++.++  ..+++.+.+.|.++++||+|++.++++|++|+....+..    ...+|.++|+|++|+|+++|+++++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~~~   76 (325)
T cd08264           1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK----VKPMPHIPGAEFAGVVEEVGDHVKGV   76 (325)
T ss_pred             CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCCC----CCCCCeecccceeEEEEEECCCCCCC
Confidence            577777644  478888888888999999999999999999998876421    12347789999999999999999999


Q ss_pred             cccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-h
Q 017426           96 VPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-P  174 (372)
Q Consensus        96 ~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~  174 (372)
                      ++        ||+|++.+...|++|.+|..++.++|++..+++. ...|+|++|+.++++.++++|+++++++++.++ .
T Consensus        77 ~~--------Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~  147 (325)
T cd08264          77 KK--------GDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGV-VSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVA  147 (325)
T ss_pred             CC--------CCEEEECCCcCCCCChhhcCCCccccCccceeec-cCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhh
Confidence            99        9999998888999999999999999998776554 357999999999999999999999999988776 5


Q ss_pred             hHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHH
Q 017426          175 LSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE  253 (372)
Q Consensus       175 ~~~a~~~l~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~  253 (372)
                      +.+||++++.+++++|++++|+|+ |.+|++++++|+.+|++ ++++.    +.+.++++|++.+++.+    ++.+.++
T Consensus       148 ~~~a~~~l~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~-v~~~~----~~~~~~~~g~~~~~~~~----~~~~~l~  218 (325)
T cd08264         148 ALTAYHALKTAGLGPGETVVVFGASGNTGIFAVQLAKMMGAE-VIAVS----RKDWLKEFGADEVVDYD----EVEEKVK  218 (325)
T ss_pred             hHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCe-EEEEe----HHHHHHHhCCCeeecch----HHHHHHH
Confidence            678999987788999999999998 99999999999999995 56654    23666889988776532    2234444


Q ss_pred             HHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCC-CCccccchhhhccCcEEEeeccC-CCcHHHHHHHHH
Q 017426          254 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLR  331 (372)
Q Consensus       254 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~  331 (372)
                      ++.    +++|+++|++|+ ..+..++++|+++|+++.++... ....++...+..+..++.+...+ ++.++++++++.
T Consensus       219 ~~~----~~~d~vl~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  293 (325)
T cd08264         219 EIT----KMADVVINSLGS-SFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAK  293 (325)
T ss_pred             HHh----CCCCEEEECCCH-HHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHH
Confidence            432    579999999997 58899999999999999998542 22344455555667777776443 467888999985


Q ss_pred             cCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEE
Q 017426          332 SGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV  368 (372)
Q Consensus       332 ~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkv  368 (372)
                      ...    ..+.++|++  +++++|++.+.++...+|+
T Consensus       294 ~~~----~~~~~~~~~--~~~~~a~~~~~~~~~~~kv  324 (325)
T cd08264         294 DLK----VKVWKTFKL--EEAKEALKELFSKERDGRI  324 (325)
T ss_pred             cCC----ceeEEEEcH--HHHHHHHHHHHcCCCcccc
Confidence            332    346688888  9999999999888777775

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=2.4e-36  Score=280.22  Aligned_cols=289  Identities=19%  Similarity=0.236  Sum_probs=229.8

Q ss_pred             cCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccccccccCC
Q 017426           25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLV  104 (372)
Q Consensus        25 ~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~gd~v~~~  104 (372)
                      +++.+++.+.|.|+|+++||||||.++|+|+.++.   |.+.   ....|.++|.|++|+|+++|+   .|++       
T Consensus        15 ~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~---~~~~~~i~G~~~~g~v~~~~~---~~~~-------   78 (325)
T TIGR02825        15 TDSDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKR---LKEGDTMMGQQVARVVESKNV---ALPK-------   78 (325)
T ss_pred             CCCceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCc---CCCCCcEecceEEEEEEeCCC---CCCC-------
Confidence            56789999999999999999999999999996543   3221   123477999999999999874   5888       


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEEC----CCCCCcccc-cccc-hhHHH
Q 017426          105 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL----PDNVSLEEG-AMCE-PLSVG  178 (372)
Q Consensus       105 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~----P~~~~~~~a-a~~~-~~~~a  178 (372)
                       ||||+.                               .++|++|+.++.++++++    |+++++++| ++++ ++.||
T Consensus        79 -GdrV~~-------------------------------~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA  126 (325)
T TIGR02825        79 -GTIVLA-------------------------------SPGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTA  126 (325)
T ss_pred             -CCEEEE-------------------------------ecCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHH
Confidence             888874                               246899999999988888    899999887 4554 78899


Q ss_pred             HHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHH
Q 017426          179 VHAC-RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       179 ~~~l-~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~  256 (372)
                      |+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ .++++.+++++.++++++|++.+++++.. .++.+.++.. 
T Consensus       127 ~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~-~~~~~~~~~~-  203 (325)
T TIGR02825       127 YFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTV-KSLEETLKKA-  203 (325)
T ss_pred             HHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEecccc-ccHHHHHHHh-
Confidence            9998 5688999999999986 9999999999999999 57888889999999999999998876431 2454444443 


Q ss_pred             HHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC-----Ccc--ccchhhhccCcEEEeeccC-------CCc
Q 017426          257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-----EMT--VPLTPAAVREVDVVGVFRY-------KNT  322 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~--~~~~~~~~~~~~i~~~~~~-------~~~  322 (372)
                        .++++|++||++|+. .+..++++++++|+++.+|....     ...  .....+..+.+++.++...       .+.
T Consensus       204 --~~~gvdvv~d~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  280 (325)
T TIGR02825       204 --SPDGYDCYFDNVGGE-FSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKA  280 (325)
T ss_pred             --CCCCeEEEEECCCHH-HHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHH
Confidence              246899999999975 77999999999999999985321     111  1233456677777776521       246


Q ss_pred             HHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          323 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       323 ~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      ++++++++++|.+.  +.+...|++  +++++|++.+.+++..||+|++
T Consensus       281 ~~~~~~l~~~g~l~--~~~~~~~~l--~~~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       281 LKELLKWVLEGKIQ--YKEYVIEGF--ENMPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             HHHHHHHHHCCCcc--cceeccccH--HHHHHHHHHHhcCCCCCeEEeC
Confidence            78899999999994  445566777  9999999999999899999874

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=9.5e-36  Score=279.10  Aligned_cols=324  Identities=22%  Similarity=0.310  Sum_probs=254.1

Q ss_pred             ceeEEEecCC---ceeEEE-ecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccC-----------------CcccCCCcc
Q 017426           18 NMAAWLLGVN---TLKIQP-FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA-----------------DFVVKEPMV   76 (372)
Q Consensus        18 ~~~~~~~~~~---~l~~~~-~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~-----------------~~~~~~p~~   76 (372)
                      ||++++..++   .+.+.+ .+.|.|.+++|+|||.++++|++|+.+..|....                 .....+|.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~   80 (350)
T cd08274           1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI   80 (350)
T ss_pred             CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence            5777776543   455653 5777789999999999999999999988764321                 012456889


Q ss_pred             cccceeEEEEEecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCc
Q 017426           77 IGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL  156 (372)
Q Consensus        77 ~G~e~~G~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~  156 (372)
                      +|||++|+|+++|+++++|++        ||+|++.+...|++|..|...        ..++ ...+|+|++|+.++.+.
T Consensus        81 ~G~e~~G~V~~vG~~v~~~~~--------Gd~V~~~~~~~~~~~~~~~~~--------~~~~-~~~~g~~~~~~~v~~~~  143 (350)
T cd08274          81 QGADIVGRVVAVGEGVDTARI--------GERVLVDPSIRDPPEDDPADI--------DYIG-SERDGGFAEYTVVPAEN  143 (350)
T ss_pred             cCCcceEEEEEeCCCCCCCCC--------CCEEEEecCcCCCCccccccc--------cccC-CCCCccceEEEEecHHH
Confidence            999999999999999999999        999999888888887765421        1111 12369999999999999


Q ss_pred             eEECCCCCCcccccccc-hhHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC
Q 017426          157 CFKLPDNVSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG  234 (372)
Q Consensus       157 ~~~~P~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg  234 (372)
                      ++++|+++++.+++.+. .+.+||++++..++++|+++||+|+ |.+|++++++|+.+|++ ++++..++ +.+.++++|
T Consensus       144 ~~~ip~~~~~~~~a~l~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~-vi~~~~~~-~~~~~~~~g  221 (350)
T cd08274         144 AYPVNSPLSDVELATFPCSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRRGAI-VIAVAGAA-KEEAVRALG  221 (350)
T ss_pred             ceeCCCCCCHHHHHhcccHHHHHHHHHhhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCE-EEEEeCch-hhHHHHhcC
Confidence            99999999998888765 7788999987788999999999998 99999999999999996 66665555 788889999


Q ss_pred             CCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-ccccchhhhccCcEE
Q 017426          235 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDV  313 (372)
Q Consensus       235 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i  313 (372)
                      ++.+...  ....+.+  ...  +.+.++|++||++|+ ..+..++++++++|+++.++..... ..++...+..++.++
T Consensus       222 ~~~~~~~--~~~~~~~--~~~--~~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  294 (350)
T cd08274         222 ADTVILR--DAPLLAD--AKA--LGGEPVDVVADVVGG-PLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTL  294 (350)
T ss_pred             CeEEEeC--CCccHHH--HHh--hCCCCCcEEEecCCH-HHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEE
Confidence            8754432  2223322  222  245789999999997 4889999999999999999854332 344445556778888


Q ss_pred             EeeccC-CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          314 VGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       314 ~~~~~~-~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      .++... .+.+.++++++.++.+  .+.+.++|++  +++++|++.+..+...+|++++
T Consensus       295 ~~~~~~~~~~~~~~~~l~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvi~  349 (350)
T cd08274         295 FGSTLGTREVFRRLVRYIEEGEI--RPVVAKTFPL--SEIREAQAEFLEKRHVGKLVLV  349 (350)
T ss_pred             EEeecCCHHHHHHHHHHHHCCCc--ccccccccCH--HHHHHHHHHHhcCCCceEEEEe
Confidence            876654 5678999999999988  4556788888  9999999999988888999986

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=9.4e-36  Score=276.73  Aligned_cols=297  Identities=20%  Similarity=0.255  Sum_probs=233.5

Q ss_pred             cceeEEEecC-------CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEec
Q 017426           17 VNMAAWLLGV-------NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG   89 (372)
Q Consensus        17 ~~~~~~~~~~-------~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   89 (372)
                      .|++.++...       +.+++.+.|.|.|+++||+|||.++|+|+.|.....     . ...+|.++|+|++|+|++  
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~-----~-~~~~p~v~G~e~~G~V~~--   73 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSK-----R-LNEGDTMIGTQVAKVIES--   73 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhcccc-----c-CCCCCcEecceEEEEEec--
Confidence            3666665541       568999999999999999999999999987654211     1 124588999999999985  


Q ss_pred             CCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC---ceEECCCCCC-
Q 017426           90 SEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD---LCFKLPDNVS-  165 (372)
Q Consensus        90 ~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~---~~~~~P~~~~-  165 (372)
                       .+++|++        ||+|+.                               .++|++|+.++.+   .++++|++++ 
T Consensus        74 -~~~~~~~--------Gd~V~~-------------------------------~~~~~~~~~~~~~~~~~~~~iP~~~~~  113 (329)
T cd08294          74 -KNSKFPV--------GTIVVA-------------------------------SFGWRTHTVSDGKDQPDLYKLPADLPD  113 (329)
T ss_pred             -CCCCCCC--------CCEEEe-------------------------------eCCeeeEEEECCccccceEECCccccc
Confidence             4567899        888874                               2578999999999   9999999988 


Q ss_pred             -c----ccccccchhHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeE
Q 017426          166 -L----EEGAMCEPLSVGVHAC-RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI  238 (372)
Q Consensus       166 -~----~~aa~~~~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v  238 (372)
                       +    ..++...++.|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ .++++.+++++.++++++|++.+
T Consensus       114 ~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~v  192 (329)
T cd08294         114 DLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKELGFDAV  192 (329)
T ss_pred             cCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence             2    2232334788999998 4688999999999986 9999999999999999 58888889999999999999998


Q ss_pred             EecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC--C--c---cccchhhhccCc
Q 017426          239 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--E--M---TVPLTPAAVREV  311 (372)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~--~---~~~~~~~~~~~~  311 (372)
                      +++.  .+++.+.++++.   ++++|++||++|+ ..+..++++++++|+++.+|....  .  .   ..+...+..+.+
T Consensus       193 i~~~--~~~~~~~v~~~~---~~gvd~vld~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~  266 (329)
T cd08294         193 FNYK--TVSLEEALKEAA---PDGIDCYFDNVGG-EFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQL  266 (329)
T ss_pred             EeCC--CccHHHHHHHHC---CCCcEEEEECCCH-HHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcc
Confidence            8754  357777666553   4689999999998 588999999999999999874221  1  0   122334667778


Q ss_pred             EEEeeccC------CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          312 DVVGVFRY------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       312 ~i~~~~~~------~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ++.++...      .+.++++++++++|.+.+.  ...+|++  +++++|++.+.+++..||+++++
T Consensus       267 ~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l--~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         267 KMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGF--ENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             eEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCH--HHHHHHHHHHHcCCCCCeEEEeC
Confidence            88776432      2346788999999998433  4455777  99999999999999999999875

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=2.9e-35  Score=273.57  Aligned_cols=325  Identities=26%  Similarity=0.416  Sum_probs=265.3

Q ss_pred             eeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccc
Q 017426           19 MAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (372)
Q Consensus        19 ~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (372)
                      |++++.++ ..+.+.+.|.|.+.++|++|++.++++|+.|+....|...   ...+|.++|+|++|+|+++|+++++|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~v~~~g~~~~~~~~   77 (330)
T cd08245           1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWG---GSKYPLVPGHEIVGEVVEVGAGVEGRKV   77 (330)
T ss_pred             CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCC---CCCCCcccCccceEEEEEECCCCccccc
Confidence            56777777 6899999999999999999999999999999998876542   1345778999999999999999999999


Q ss_pred             cccccCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-hh
Q 017426           98 GDRVTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PL  175 (372)
Q Consensus        98 gd~v~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~  175 (372)
                              ||+|++.+. .+|++|++|..+..++|++...++. ...|+|++|+.+++++++++|+++++.+++.+. .+
T Consensus        78 --------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~  148 (330)
T cd08245          78 --------GDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGY-TTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAG  148 (330)
T ss_pred             --------CCEEEEccccCCCCCChhhhCcCcccCcCccccCc-ccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhH
Confidence                    999977543 6799999999999999998655443 357999999999999999999999999998765 66


Q ss_pred             HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHH
Q 017426          176 SVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI  255 (372)
Q Consensus       176 ~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~  255 (372)
                      .+||.+++..+++++++|||+|+|.+|++++++|+.+|+ .++++.+++++.++++++|++.+++...  .+....    
T Consensus       149 ~ta~~~l~~~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~----  221 (330)
T cd08245         149 ITVYSALRDAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA--ELDEQA----  221 (330)
T ss_pred             HHHHHHHHhhCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC--cchHHh----
Confidence            789999877889999999999888899999999999999 5788888999999999999887765322  222111    


Q ss_pred             HHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-ccccchhhhccCcEEEeeccC-CCcHHHHHHHHHcC
Q 017426          256 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG  333 (372)
Q Consensus       256 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~~g  333 (372)
                         ..+++|++||+++.......++++|+++|+++.++..... ..+....+..+..++.+.... .+.+++++++++++
T Consensus       222 ---~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  298 (330)
T cd08245         222 ---AAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEG  298 (330)
T ss_pred             ---ccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcC
Confidence               1357999999988777888999999999999999754322 122233455677777776554 46788899999999


Q ss_pred             CCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEE
Q 017426          334 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  370 (372)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv  370 (372)
                      .+.  + ..+.|++  +++++|++.+.++...+|+++
T Consensus       299 ~l~--~-~~~~~~~--~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         299 KVK--P-MIETFPL--DQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             CCc--c-eEEEEcH--HHHHHHHHHHHcCCCCcceeC
Confidence            984  3 4577888  999999999999988888875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.5e-35  Score=271.00  Aligned_cols=298  Identities=38%  Similarity=0.645  Sum_probs=246.7

Q ss_pred             ceeEEEec--CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccc
Q 017426           18 NMAAWLLG--VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (372)
Q Consensus        18 ~~~~~~~~--~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (372)
                      ||+++..+  +..+.+.+++.|++.++||+|+|.++++|+.|+....|.+.   ....|.++|+|++|+|+++|++++.|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~   77 (306)
T cd08258           1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYD---PVETPVVLGHEFSGTIVEVGPDVEGW   77 (306)
T ss_pred             CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCC---cCCCCeeeccceEEEEEEECCCcCcC
Confidence            46667664  35699999999999999999999999999999988876431   12457889999999999999999999


Q ss_pred             cccccccCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccch
Q 017426           96 VPGDRVTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEP  174 (372)
Q Consensus        96 ~~gd~v~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~  174 (372)
                      ++        ||+|++.+. .+|+.|++|..+..+.|+....++. ...|+|++|+.++.++++++|+++++.+++...+
T Consensus        78 ~~--------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~  148 (306)
T cd08258          78 KV--------GDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGT-QADGGFAEYVLVPEESLHELPENLSLEAAALTEP  148 (306)
T ss_pred             CC--------CCEEEEccCcCCCCCCcchhCcCcccCCCCceeee-cCCCceEEEEEcchHHeEECcCCCCHHHHHhhch
Confidence            99        999988764 7899999999999999987654432 3579999999999999999999999998886668


Q ss_pred             hHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE--ecChhHHHHHHHhCCCeEEecCCCcccHHHH
Q 017426          175 LSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKEIGADNIVKVSTNLQDIAEE  251 (372)
Q Consensus       175 ~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v--~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~  251 (372)
                      +.+||+++ ..++++++++|||.|+|.+|++++|+|+.+|++ ++++  .+++++.++++++|++.+ ++  ...++.+.
T Consensus       149 ~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~-v~~~~~~~~~~~~~~~~~~g~~~~-~~--~~~~~~~~  224 (306)
T cd08258         149 LAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGAT-VVVVGTEKDEVRLDVAKELGADAV-NG--GEEDLAEL  224 (306)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEECCCCCHHHHHHHHHhCCccc-CC--CcCCHHHH
Confidence            88899987 458899999999987799999999999999996 5554  445668888899998776 54  34567666


Q ss_pred             HHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCC-CCccccchhhhccCcEEEeeccC-CCcHHHHHHH
Q 017426          252 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLEL  329 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~l  329 (372)
                      +.++.  .+.++|++||++|+...+...+++|+++|+++.++... ....+.+..+.++++++.|+..+ .+++++++++
T Consensus       225 l~~~~--~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~  302 (306)
T cd08258         225 VNEIT--DGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASWETALRL  302 (306)
T ss_pred             HHHHc--CCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCchHhHHHHHHH
Confidence            66654  35689999999987678889999999999999998754 23455667777899999999876 6779999999


Q ss_pred             HHcC
Q 017426          330 LRSG  333 (372)
Q Consensus       330 l~~g  333 (372)
                      +++|
T Consensus       303 ~~~~  306 (306)
T cd08258         303 LASG  306 (306)
T ss_pred             HhcC
Confidence            8875

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=4.1e-34  Score=265.07  Aligned_cols=311  Identities=25%  Similarity=0.299  Sum_probs=247.0

Q ss_pred             ceeEEEecC---CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        18 ~~~~~~~~~---~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      ||+++++++   ..+.+.+.+.|.+.++||+|++.++++|+.|+....|.....+....|.++|+|++|+|+++|+++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~   80 (324)
T cd08244           1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP   80 (324)
T ss_pred             CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence            577777753   45677777778889999999999999999999888775432222345788999999999999999999


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-  173 (372)
                      +++        ||+|++...                          ...|+|++|+.++.++++++|+++++.+++.+. 
T Consensus        81 ~~~--------Gd~V~~~~~--------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~  126 (324)
T cd08244          81 AWL--------GRRVVAHTG--------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVH  126 (324)
T ss_pred             CCC--------CCEEEEccC--------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcc
Confidence            999        888775310                          136999999999999999999999999988665 


Q ss_pred             hhHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHH
Q 017426          174 PLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV  252 (372)
Q Consensus       174 ~~~~a~~~l~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~  252 (372)
                      .+.+||..++.+++++++++||+|+ |.+|++++++|+.+|++ ++++.+++++.+.++++|++.++++.  +.++.+.+
T Consensus       127 ~~~ta~~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~  203 (324)
T cd08244         127 DGRTALGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGAT-VVGAAGGPAKTALVRALGADVAVDYT--RPDWPDQV  203 (324)
T ss_pred             hHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHcCCCEEEecC--CccHHHHH
Confidence            6677865567788999999999986 99999999999999994 78888889999999999998776543  34565555


Q ss_pred             HHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCc-cccchhhhccCcEEEeeccC-------CCcHH
Q 017426          253 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY-------KNTWP  324 (372)
Q Consensus       253 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-------~~~~~  324 (372)
                      .+..  .+.++|+++|++|+. ....++++++++|+++.++...... .++...+..+..++.+....       .+.++
T Consensus       204 ~~~~--~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (324)
T cd08244         204 REAL--GGGGVTVVLDGVGGA-IGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEA  280 (324)
T ss_pred             HHHc--CCCCceEEEECCChH-hHHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHH
Confidence            5443  356799999999986 6688999999999999998644321 23333445677777665432       24577


Q ss_pred             HHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          325 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       325 ~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +++++++++.+  .+.+.+.|++  +++++|++.+.++...+|+++++
T Consensus       281 ~~~~~l~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         281 RALAEAAAGRL--VPVVGQTFPL--ERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             HHHHHHHCCCc--cCccceEEeH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            88999999988  4457788888  99999999999999999999864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=3.4e-34  Score=267.09  Aligned_cols=298  Identities=20%  Similarity=0.302  Sum_probs=233.5

Q ss_pred             CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccccccccCCC
Q 017426           26 VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVP  105 (372)
Q Consensus        26 ~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~gd~v~~~~  105 (372)
                      ++.+++.++|.|.|+++||+|||+++++|+.|+..+.|...   ...+|.++|+|++|+|+++|+++++|++        
T Consensus        14 ~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~---~~~~~~~~g~e~~G~V~~vG~~v~~~~~--------   82 (336)
T TIGR02817        14 PDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAP---EAGQPKILGWDAAGVVVAVGDEVTLFKP--------   82 (336)
T ss_pred             cccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCC---CCCCCcccceeeEEEEEEeCCCCCCCCC--------
Confidence            46788889999999999999999999999999988876432   1345788999999999999999999999        


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-hhHHHHHHH-H
Q 017426          106 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-R  183 (372)
Q Consensus       106 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~  183 (372)
                      ||+|+...                         .....|+|++|+.++++.++++|+++++++++.++ .+.+||+++ .
T Consensus        83 Gd~V~~~~-------------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~  137 (336)
T TIGR02817        83 GDEVWYAG-------------------------DIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFD  137 (336)
T ss_pred             CCEEEEcC-------------------------CCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHH
Confidence            88876421                         01236999999999999999999999999999776 667899998 4


Q ss_pred             hcCCCC-----CCEEEEECC-CHHHHHHHHHHHHc-CCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHH
Q 017426          184 RANIGP-----ETNVLIMGA-GPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       184 ~~~~~~-----g~~vlI~Ga-g~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~  256 (372)
                      .+++++     |++|||+|+ |.+|++++|+|+.+ |+ .|+++.+++++.++++++|++.+++++   .++.+.+++. 
T Consensus       138 ~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~---~~~~~~i~~~-  212 (336)
T TIGR02817       138 RLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELGAHHVIDHS---KPLKAQLEKL-  212 (336)
T ss_pred             hcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECC---CCHHHHHHHh-
Confidence            577777     999999987 99999999999998 98 578887888899999999998887643   2566666653 


Q ss_pred             HHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeecc-----C--------CCcH
Q 017426          257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR-----Y--------KNTW  323 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~-----~--------~~~~  323 (372)
                        .++++|+++|++++.......+++++++|+++.++..   ..++...+..++..+.+...     .        .+.+
T Consensus       213 --~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (336)
T TIGR02817       213 --GLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDP---AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLL  287 (336)
T ss_pred             --cCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEccc---ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHH
Confidence              3568999999987667888999999999999987422   12222333333343332111     0        1457


Q ss_pred             HHHHHHHHcCCCCCCCceEEEecC-ChHHHHHHHHHHhcCCCceEEEEe
Q 017426          324 PLCLELLRSGKIDVKPLVTHRFGF-SQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       324 ~~~~~ll~~g~~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      +++++++.++.+  .+.+.+.+++ +++++++|++.+.+++..+|++++
T Consensus       288 ~~~~~l~~~~~l--~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       288 NRVARLVDAGKI--RTTLAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             HHHHHHHHCCCe--eccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            889999999988  3444455542 349999999999999888999875

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=6.5e-34  Score=265.73  Aligned_cols=311  Identities=23%  Similarity=0.327  Sum_probs=243.3

Q ss_pred             ceeEEEecCCc----eeEEEecCCCCCC-CcEEEEEeeeeeCcccHHhhhhcccCCcc--cCCCcccccceeEEEEEecC
Q 017426           18 NMAAWLLGVNT----LKIQPFELPSLGP-YDVLVRMKAVGICGSDVHYLKTLRCADFV--VKEPMVIGHECAGVIEKVGS   90 (372)
Q Consensus        18 ~~~~~~~~~~~----l~~~~~~~p~~~~-~evlV~v~~~~~~~~d~~~~~g~~~~~~~--~~~p~~~G~e~~G~V~~vG~   90 (372)
                      ||+.+++.++.    +.+.+.|.|.|.+ +||+||+.++|+|+.|+....|.......  ..+|.++|+|++|+|+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS   80 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence            68888886543    8999999999887 99999999999999999988775321110  12577899999999999999


Q ss_pred             CCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccccc
Q 017426           91 EVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA  170 (372)
Q Consensus        91 ~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa  170 (372)
                      ++..|++        ||+|++...                           ..|+|++|+.+++++++++|+++++++++
T Consensus        81 ~v~~~~~--------Gd~V~~~~~---------------------------~~g~~~~~~~v~~~~~~~lp~~~~~~~aa  125 (341)
T cd08290          81 GVKSLKP--------GDWVIPLRP---------------------------GLGTWRTHAVVPADDLIKVPNDVDPEQAA  125 (341)
T ss_pred             CCCCCCC--------CCEEEecCC---------------------------CCccchheEeccHHHeEeCCCCCCHHHHH
Confidence            9999999        888875311                           24999999999999999999999999998


Q ss_pred             ccc-hhHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh----hHHHHHHHhCCCeEEecCC
Q 017426          171 MCE-PLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD----YRLSVAKEIGADNIVKVST  243 (372)
Q Consensus       171 ~~~-~~~~a~~~l~~-~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~----~~~~~~~~lg~~~v~~~~~  243 (372)
                      .++ .+.+||+++.. ..+++|++|||+|+ |.+|++++|+|++.|++ ++++..++    ++.++++++|++.++++..
T Consensus       126 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  204 (341)
T cd08290         126 TLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIK-TINVVRDRPDLEELKERLKALGADHVLTEEE  204 (341)
T ss_pred             HhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCe-EEEEEcCCCcchhHHHHHHhcCCCEEEeCcc
Confidence            776 67789999854 78899999999987 99999999999999996 45554444    6788888999998876432


Q ss_pred             C-cccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC-CccccchhhhccCcEEEeeccC--
Q 017426          244 N-LQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY--  319 (372)
Q Consensus       244 ~-~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~--  319 (372)
                      . ..++...++.+.   ++++|++||++|+. .+...+++++++|+++.++.... ...++......+..++.+....  
T Consensus       205 ~~~~~~~~~i~~~~---~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (341)
T cd08290         205 LRSLLATELLKSAP---GGRPKLALNCVGGK-SATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRW  280 (341)
T ss_pred             cccccHHHHHHHHc---CCCceEEEECcCcH-hHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHH
Confidence            1 015555565543   23899999999985 67788999999999999985332 2233443456677777776432  


Q ss_pred             ---------CCcHHHHHHHHHcCCCCCCCceEEEe---cCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          320 ---------KNTWPLCLELLRSGKIDVKPLVTHRF---GFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       320 ---------~~~~~~~~~ll~~g~~~~~~~~~~~~---~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                               .+.++++++++.++.+.  +....++   ++  +++++|++.+.++...+|+|+++
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         281 LKRANPEEKEDMLEELAELIREGKLK--APPVEKVTDDPL--EEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             HhhcCHHHHHHHHHHHHHHHHcCCcc--CCcccccccCCH--HHHHHHHHHHhhcCCCCeEEEeC
Confidence                     12578899999999884  3344555   77  99999999999988899999875

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.3e-33  Score=260.22  Aligned_cols=300  Identities=29%  Similarity=0.456  Sum_probs=241.0

Q ss_pred             cCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhh-hhcccCCcccCCCcccccceeEEEEEecCCCccccccccccC
Q 017426           25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL-KTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTL  103 (372)
Q Consensus        25 ~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~-~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~gd~v~~  103 (372)
                      +++.+++.+++.|.+.++||+|++.++++|+.|+..+ .|..... ...+|.++|+|++|+|+++|+++++|++      
T Consensus         3 ~~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~-~~~~~~~~g~e~~G~V~~vG~~v~~~~~------   75 (312)
T cd08269           3 GPGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFV-YPAEPGGPGHEGWGRVVALGPGVRGLAV------   75 (312)
T ss_pred             CCCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcc-cCCCCcccceeeEEEEEEECCCCcCCCC------
Confidence            4567899999999999999999999999999999887 6532111 1234778999999999999999999999      


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccccccc-chhHHHHHHH
Q 017426          104 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGVHAC  182 (372)
Q Consensus       104 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~-~~~~~a~~~l  182 (372)
                        ||+|+..                             ..|+|++|+.++++.++++|+++  ..++.. .+++++++++
T Consensus        76 --Gd~V~~~-----------------------------~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~  122 (312)
T cd08269          76 --GDRVAGL-----------------------------SGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVF  122 (312)
T ss_pred             --CCEEEEe-----------------------------cCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHH
Confidence              8888752                             24899999999999999999998  233333 5778889888


Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCc
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~  262 (372)
                      +.+++++|+++||+|+|.+|++++|+|+.+|++.++++.+++++.++++++|++.++..  ...++.+.+.++.  .+.+
T Consensus       123 ~~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~l~~~~--~~~~  198 (312)
T cd08269         123 RRGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTD--DSEAIVERVRELT--GGAG  198 (312)
T ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecC--CCcCHHHHHHHHc--CCCC
Confidence            88889999999999889999999999999999647888888889999999999877653  3356767776654  3568


Q ss_pred             ceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCC-CCccccchhhhccCcEEEeeccC-----CCcHHHHHHHHHcCCCC
Q 017426          263 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY-----KNTWPLCLELLRSGKID  336 (372)
Q Consensus       263 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~ll~~g~~~  336 (372)
                      +|++||+.|+.......+++|+++|+++.++... ....+......++.+++.++...     .+.+++++++++++.+.
T Consensus       199 vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  278 (312)
T cd08269         199 ADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLD  278 (312)
T ss_pred             CCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCC
Confidence            9999999987778899999999999999998543 22233444566777777766432     35789999999999985


Q ss_pred             CCCceEEEecCChHHHHHHHHHHhcCCC-ceEEEE
Q 017426          337 VKPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMF  370 (372)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~-~gkvvv  370 (372)
                      +...+.+.|++  +++++|++.+.+++. .+|+++
T Consensus       279 ~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         279 LGSLLTHEFPL--EELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             chhheeeeecH--HHHHHHHHHHHhCCCCceEEEe
Confidence            43346678888  999999999888844 688886

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=7.6e-33  Score=257.70  Aligned_cols=329  Identities=27%  Similarity=0.374  Sum_probs=260.0

Q ss_pred             ceeEEEec---CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        18 ~~~~~~~~---~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      ||+.++++   ...+++.+.+.|.+.++|++|++.++++|+.|+....|.....  ...|.++|+|++|+|+++|+++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~~G~~~~~   78 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPP--VKDPLIPLSDGAGEVVAVGEGVTR   78 (336)
T ss_pred             CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCC--CCCCcccccceeEEEEEeCCCCcC
Confidence            67878773   3678888888888899999999999999999999887654322  235788999999999999999999


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-  173 (372)
                      |++        ||+|++....+|..+.+|....      ....+ ....|+|++|+.++.+.++++|+++++.+++.+. 
T Consensus        79 ~~~--------Gd~V~~~~~~~~~~~~~~~~~~------~~~~~-~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~  143 (336)
T cd08276          79 FKV--------GDRVVPTFFPNWLDGPPTAEDE------ASALG-GPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPC  143 (336)
T ss_pred             CCC--------CCEEEEeccccccccccccccc------ccccc-cccCceeeeEEEecHHHeEECCCCCCHHHhhhhhH
Confidence            999        8888887665665544433222      11222 2347899999999999999999999998888776 


Q ss_pred             hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHH
Q 017426          174 PLSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV  252 (372)
Q Consensus       174 ~~~~a~~~l~-~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~  252 (372)
                      .+.+||+++. .+.+++|++++|+|+|.+|+++++++++.|++ ++++..++++.+.++++|++.+++... ..++.+.+
T Consensus       144 ~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~  221 (336)
T cd08276         144 AGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGAR-VIATSSSDEKLERAKALGADHVINYRT-TPDWGEEV  221 (336)
T ss_pred             HHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCCEEEcCCc-ccCHHHHH
Confidence            6778999885 47899999999998899999999999999995 777888889999998899888765432 14566666


Q ss_pred             HHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-ccccchhhhccCcEEEeeccC-CCcHHHHHHHH
Q 017426          253 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELL  330 (372)
Q Consensus       253 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll  330 (372)
                      +++.  .+.++|++||+++. .....++++++++|+++.++..... ..........+++.+.+.... .+.++++++++
T Consensus       222 ~~~~--~~~~~d~~i~~~~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  298 (336)
T cd08276         222 LKLT--GGRGVDHVVEVGGP-GTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAI  298 (336)
T ss_pred             HHHc--CCCCCcEEEECCCh-HHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHH
Confidence            6553  35689999999985 5788999999999999999864432 233344556788888877543 56788899999


Q ss_pred             HcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          331 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       331 ~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +++.+  .+..++.|++  ++++++++.+.+++..+|+++++
T Consensus       299 ~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  336 (336)
T cd08276         299 EAHRI--RPVIDRVFPF--EEAKEAYRYLESGSHFGKVVIRV  336 (336)
T ss_pred             HcCCc--ccccCcEEeH--HHHHHHHHHHHhCCCCceEEEeC
Confidence            98887  3445677888  99999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-33  Score=259.22  Aligned_cols=308  Identities=22%  Similarity=0.323  Sum_probs=244.2

Q ss_pred             cceeEEEecCC---ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCc
Q 017426           17 VNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (372)
Q Consensus        17 ~~~~~~~~~~~---~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (372)
                      |||++++..++   .+.+.+.+.|.+.++|++|||.++++|+.|+....|....  ....|.++|+|++|+|+++|++++
T Consensus         1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~~v~   78 (334)
T PTZ00354          1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPP--PPGSSEILGLEVAGYVEDVGSDVK   78 (334)
T ss_pred             CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCcccceeeEEEEEEeCCCCC
Confidence            58898888654   5777788888889999999999999999999888764321  123466899999999999999999


Q ss_pred             cccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc
Q 017426           94 TLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE  173 (372)
Q Consensus        94 ~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~  173 (372)
                      ++++        ||+|+..                            ..+|+|++|+.++.++++++|+++++.+++.+.
T Consensus        79 ~~~~--------Gd~V~~~----------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~  122 (334)
T PTZ00354         79 RFKE--------GDRVMAL----------------------------LPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIP  122 (334)
T ss_pred             CCCC--------CCEEEEe----------------------------cCCCceeeEEEecHHHcEeCCCCCCHHHHHHHH
Confidence            9999        8888752                            124899999999999999999999998888665


Q ss_pred             -hhHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCccc-HH
Q 017426          174 -PLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD-IA  249 (372)
Q Consensus       174 -~~~~a~~~l~~-~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~-~~  249 (372)
                       .+.+||+++.. +.+++|++|||+|+ |.+|++++++|+.+|++ ++.+.+++++.++++++|++.++++..  .+ +.
T Consensus       123 ~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~  199 (334)
T PTZ00354        123 EAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAA-TIITTSSEEKVDFCKKLAAIILIRYPD--EEGFA  199 (334)
T ss_pred             HHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCcEEEecCC--hhHHH
Confidence             67889999855 78999999999986 99999999999999995 455778899999999999987766432  23 55


Q ss_pred             HHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC-Ccc-ccchhhhccCcEEEeeccCC-------
Q 017426          250 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMT-VPLTPAAVREVDVVGVFRYK-------  320 (372)
Q Consensus       250 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~-~~~~~~~~~~~~i~~~~~~~-------  320 (372)
                      +.+++..  .+.++|++||++++ ..+..++++++++|+++.++.... ... +....+..+..++.++....       
T Consensus       200 ~~~~~~~--~~~~~d~~i~~~~~-~~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (334)
T PTZ00354        200 PKVKKLT--GEKGVNLVLDCVGG-SYLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKA  276 (334)
T ss_pred             HHHHHHh--CCCCceEEEECCch-HHHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhH
Confidence            6665543  35689999999986 588899999999999999985432 211 44444555666776654321       


Q ss_pred             ----CcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          321 ----NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       321 ----~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                          +.++++++++.++.+  .+.+.+.+++  ++++++++.+.++...+|+++++
T Consensus       277 ~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvvv~~  328 (334)
T PTZ00354        277 DLVASFEREVLPYMEEGEI--KPIVDRTYPL--EEVAEAHTFLEQNKNIGKVVLTV  328 (334)
T ss_pred             HHHHHHHHHHHHHHHCCCc--cCccccEEcH--HHHHHHHHHHHhCCCCceEEEec
Confidence                234778889999988  4456778888  99999999999888888999864

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=3.6e-33  Score=259.25  Aligned_cols=309  Identities=25%  Similarity=0.276  Sum_probs=241.3

Q ss_pred             cceeEEEec---CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCc
Q 017426           17 VNMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (372)
Q Consensus        17 ~~~~~~~~~---~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (372)
                      +|+++.+.+   +..+++.+++.|.|+++||+|||.++|+|++|+....|.+..   ..+|.++|+|++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~vG~~v~   77 (327)
T PRK10754          1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP---PSLPSGLGTEAAGVVSKVGSGVK   77 (327)
T ss_pred             CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC---CCCCCccCcceEEEEEEeCCCCC
Confidence            367777764   357899999999999999999999999999999887764321   23577899999999999999999


Q ss_pred             cccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc
Q 017426           94 TLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE  173 (372)
Q Consensus        94 ~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~  173 (372)
                      .+++        ||+|+..                           ....|+|++|+.++.++++++|+++++++++.+.
T Consensus        78 ~~~~--------Gd~V~~~---------------------------~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~  122 (327)
T PRK10754         78 HIKV--------GDRVVYA---------------------------QSALGAYSSVHNVPADKAAILPDAISFEQAAASF  122 (327)
T ss_pred             CCCC--------CCEEEEC---------------------------CCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHH
Confidence            9999        8887641                           0135899999999999999999999999888655


Q ss_pred             -hhHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHH
Q 017426          174 -PLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE  250 (372)
Q Consensus       174 -~~~~a~~~l~-~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~  250 (372)
                       .+.+||.++. .+++++|++++|+|+ |.+|++++|+++.+|++ +++++.++++.++++++|++.+++.  ...++.+
T Consensus       123 ~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~-v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~  199 (327)
T PRK10754        123 LKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAK-LIGTVGSAQKAQRAKKAGAWQVINY--REENIVE  199 (327)
T ss_pred             HHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHCCCCEEEcC--CCCcHHH
Confidence             6678888875 478999999999976 99999999999999995 7777788999999999999877654  3356767


Q ss_pred             HHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-ccccchhhhccC------cEEEeeccC----
Q 017426          251 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVRE------VDVVGVFRY----  319 (372)
Q Consensus       251 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~------~~i~~~~~~----  319 (372)
                      .++++.  .+.++|++||++++ ..+...+++++++|+++.++..... .......+..+.      ..+.+....    
T Consensus       200 ~~~~~~--~~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (327)
T PRK10754        200 RVKEIT--GGKKVRVVYDSVGK-DTWEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREEL  276 (327)
T ss_pred             HHHHHc--CCCCeEEEEECCcH-HHHHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHH
Confidence            776654  35689999999997 4788899999999999999854322 122222222111      111121111    


Q ss_pred             CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          320 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       320 ~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      .+.++++++++.+|.+.+.....+.|++  ++++++++.+.++...+|+|+.
T Consensus       277 ~~~~~~~~~~l~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~~~  326 (327)
T PRK10754        277 TEASNELFSLIASGVIKVDVAEQQKFPL--KDAQRAHEILESRATQGSSLLI  326 (327)
T ss_pred             HHHHHHHHHHHHCCCeeeecccCcEEcH--HHHHHHHHHHHcCCCcceEEEe
Confidence            2235668899999998544445678888  9999999999999999999985

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=7.1e-33  Score=254.62  Aligned_cols=293  Identities=24%  Similarity=0.301  Sum_probs=236.2

Q ss_pred             ceeEEEec--CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccc
Q 017426           18 NMAAWLLG--VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (372)
Q Consensus        18 ~~~~~~~~--~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (372)
                      ||+.++++  +..+++.+.+.|.+.++||+||+.++++|+.|+....+       ...|.++|+|++|+|+++|+++++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~-------~~~~~~~g~e~~G~v~~~G~~v~~~   73 (305)
T cd08270           1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAE-------RPDGAVPGWDAAGVVERAAADGSGP   73 (305)
T ss_pred             CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhcc-------CCCCCcccceeEEEEEEeCCCCCCC
Confidence            46666664  56777889999999999999999999999999887542       1336789999999999999999999


Q ss_pred             cccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-h
Q 017426           96 VPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-P  174 (372)
Q Consensus        96 ~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~  174 (372)
                      ++        ||+|+..                            ...|+|++|+.++.++++++|+++++.+++.++ .
T Consensus        74 ~~--------Gd~V~~~----------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~  117 (305)
T cd08270          74 AV--------GARVVGL----------------------------GAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVA  117 (305)
T ss_pred             CC--------CCEEEEe----------------------------cCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhH
Confidence            99        8888752                            125999999999999999999999999999876 6


Q ss_pred             hHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHH
Q 017426          175 LSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE  253 (372)
Q Consensus       175 ~~~a~~~l~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~  253 (372)
                      +.+||+++......+|++++|+|+ |.+|++++++++.+|+ .++.+.+++++.+.++++|++..+...   .       
T Consensus       118 ~~ta~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~---~-------  186 (305)
T cd08270         118 GVTALRALRRGGPLLGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGG---S-------  186 (305)
T ss_pred             HHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecc---c-------
Confidence            678999987644446999999998 9999999999999999 578888889999999999987554311   1       


Q ss_pred             HHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-ccccchhhhc--cCcEEEeeccC-----CCcHHH
Q 017426          254 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAV--REVDVVGVFRY-----KNTWPL  325 (372)
Q Consensus       254 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~--~~~~i~~~~~~-----~~~~~~  325 (372)
                      ++.   .+++|+++|++|+. ....++++|+++|+++.+|..... ..++...+..  ++.++.+....     .+.++.
T Consensus       187 ~~~---~~~~d~vl~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
T cd08270         187 ELS---GAPVDLVVDSVGGP-QLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLAR  262 (305)
T ss_pred             ccc---CCCceEEEECCCcH-HHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHH
Confidence            111   25799999999985 788999999999999999864421 2333333433  46676665443     356888


Q ss_pred             HHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          326 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       326 ~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ++++++++.+.  +.+.+++++  +++++|++.+.++...+|+++++
T Consensus       263 ~~~~~~~~~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         263 LLGLVAAGRLD--PRIGWRGSW--TEIDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             HHHHHHCCCcc--ceeccEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            99999999994  446678888  99999999999998899999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1.7e-33  Score=258.64  Aligned_cols=299  Identities=27%  Similarity=0.418  Sum_probs=222.8

Q ss_pred             CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCc-ccCCCcccccceeEE---EEEec-CCCccccccccc
Q 017426           27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF-VVKEPMVIGHECAGV---IEKVG-SEVKTLVPGDRV  101 (372)
Q Consensus        27 ~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~-~~~~p~~~G~e~~G~---V~~vG-~~v~~~~~gd~v  101 (372)
                      ..+...+.++|.|.+++++|++.++++||.|+.+..|...... ...+|.+++.++.|.   +...| ..+..+..    
T Consensus        18 ~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~----   93 (347)
T KOG1198|consen   18 EVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVH----   93 (347)
T ss_pred             ceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEe----
Confidence            3455568899999999999999999999999999998664322 024554444444444   33333 22223333    


Q ss_pred             cCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-hhHHHHH
Q 017426          102 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVH  180 (372)
Q Consensus       102 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~  180 (372)
                          ||.+..                            ....|+|+||+.+|+..++++|+++++.+|+.++ .+.+||.
T Consensus        94 ----g~~~~~----------------------------~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~  141 (347)
T KOG1198|consen   94 ----GDAVVA----------------------------FLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALS  141 (347)
T ss_pred             ----eeEEee----------------------------ccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHH
Confidence                554443                            2357999999999999999999999999999888 7779999


Q ss_pred             HHHh-c------CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHH
Q 017426          181 ACRR-A------NIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV  252 (372)
Q Consensus       181 ~l~~-~------~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~  252 (372)
                      ++.. .      ++++|++|||+|+ |++|++++|+|++.|+. .+++.+++++.++++++|++.+++|++  +++.+.+
T Consensus       142 al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~-~v~t~~s~e~~~l~k~lGAd~vvdy~~--~~~~e~~  218 (347)
T KOG1198|consen  142 ALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAI-KVVTACSKEKLELVKKLGADEVVDYKD--ENVVELI  218 (347)
T ss_pred             HHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCc-EEEEEcccchHHHHHHcCCcEeecCCC--HHHHHHH
Confidence            9954 7      7999999999976 99999999999999964 566669999999999999999999865  6777776


Q ss_pred             HHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCC---CCcccc-c----hhhhccCcEEEe-------ec
Q 017426          253 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH---HEMTVP-L----TPAAVREVDVVG-------VF  317 (372)
Q Consensus       253 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~---~~~~~~-~----~~~~~~~~~i~~-------~~  317 (372)
                      ++.+   +.+||+||||+|+. .+...+.++...|+...++...   .....+ +    ...........+       +.
T Consensus       219 kk~~---~~~~DvVlD~vg~~-~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (347)
T KOG1198|consen  219 KKYT---GKGVDVVLDCVGGS-TLTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFV  294 (347)
T ss_pred             Hhhc---CCCccEEEECCCCC-ccccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeec
Confidence            6543   68999999999985 6677888888777644443221   111111 0    110001111111       11


Q ss_pred             cCCCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          318 RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       318 ~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ...+.++.+.++++.+++  .+.+.+.|++  +++.+|++.+.++...||+++.+
T Consensus       295 ~~~~~l~~l~~~ie~gki--kp~i~~~~p~--~~~~ea~~~~~~~~~~GK~vl~~  345 (347)
T KOG1198|consen  295 PSAEYLKALVELIEKGKI--KPVIDSVYPF--SQAKEAFEKLEKSHATGKVVLEK  345 (347)
T ss_pred             CCHHHHHHHHHHHHcCcc--cCCcceeeeH--HHHHHHHHHHhhcCCcceEEEEe
Confidence            115678999999999977  8999999999  99999999999999999999864

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=6.2e-33  Score=258.84  Aligned_cols=313  Identities=26%  Similarity=0.326  Sum_probs=239.5

Q ss_pred             ceeEEEecC--CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccc
Q 017426           18 NMAAWLLGV--NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (372)
Q Consensus        18 ~~~~~~~~~--~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (372)
                      ||++++.++  ..+++.+.+.|.|+++||+|++.++++|++|+....+..    ...+|.++|+|++|+|+.+|+++++|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~~~   76 (339)
T cd08249           1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF----IPSYPAILGCDFAGTVVEVGSGVTRF   76 (339)
T ss_pred             CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc----ccCCCceeeeeeeEEEEEeCCCcCcC
Confidence            678888877  788999999999999999999999999999988765422    12357789999999999999999999


Q ss_pred             cccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-h
Q 017426           96 VPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-P  174 (372)
Q Consensus        96 ~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~  174 (372)
                      ++        ||+|+..+...|+                    ....+|+|++|+.++.+.++++|+++++.+++.++ .
T Consensus        77 ~~--------Gd~V~~~~~~~~~--------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~  128 (339)
T cd08249          77 KV--------GDRVAGFVHGGNP--------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVG  128 (339)
T ss_pred             CC--------CCEEEEEeccccC--------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchH
Confidence            99        8888764332211                    11246999999999999999999999999998877 7


Q ss_pred             hHHHHHHHH-hcCC----------CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecC
Q 017426          175 LSVGVHACR-RANI----------GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  242 (372)
Q Consensus       175 ~~~a~~~l~-~~~~----------~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~  242 (372)
                      +.+||+++. ..++          ++++++||+|+ |.+|++++++++.+|++ ++++. ++++.+.++++|++.++++.
T Consensus       129 ~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~-v~~~~-~~~~~~~~~~~g~~~v~~~~  206 (339)
T cd08249         129 LVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYK-VITTA-SPKNFDLVKSLGADAVFDYH  206 (339)
T ss_pred             HHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCe-EEEEE-CcccHHHHHhcCCCEEEECC
Confidence            789999884 3433          78999999997 99999999999999995 55655 56888888999998877643


Q ss_pred             CCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhcc--CCEEEEEcCCCCCccccchhhhccCcEEEeec---
Q 017426          243 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCA--GGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF---  317 (372)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~---  317 (372)
                        ..++.+.++++.   ++++|++||++|++..+..+++++++  +|+++.++.......+. ..............   
T Consensus       207 --~~~~~~~l~~~~---~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~  280 (339)
T cd08249         207 --DPDVVEDIRAAT---GGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEPR-KGVKVKFVLGYTVFGEI  280 (339)
T ss_pred             --CchHHHHHHHhc---CCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccccCC-CCceEEEEEeeeecccc
Confidence              356666666553   46799999999985688999999999  99999997544321111 11111111111111   


Q ss_pred             -----cCCCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCC-CceEEEEeC
Q 017426          318 -----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL  372 (372)
Q Consensus       318 -----~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~-~~gkvvv~~  372 (372)
                           .....+++++++++++.+.+.  ....+++.++++++|++.+..++ ..+|+|+++
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         281 PEDREFGEVFWKYLPELLEEGKLKPH--PVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             cccccchHHHHHHHHHHHHcCCccCC--CceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence                 013457789999999988543  44556622399999999999998 889999875

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=2.7e-32  Score=253.51  Aligned_cols=305  Identities=22%  Similarity=0.271  Sum_probs=238.3

Q ss_pred             ceeEEEec-----CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCC
Q 017426           18 NMAAWLLG-----VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (372)
Q Consensus        18 ~~~~~~~~-----~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (372)
                      ||+.++.+     ++.+++++.+.|.+.++|++|||.++++|+.|+....|.....  ..+|.++|+|++|+|+++|+++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~--~~~p~~~g~e~~G~v~~vG~~v   79 (329)
T cd08250           2 FRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPG--VKPPFDCGFEGVGEVVAVGEGV   79 (329)
T ss_pred             ceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCC--CCCCcccCceeEEEEEEECCCC
Confidence            78877774     3568899999999999999999999999999999887643211  3568899999999999999999


Q ss_pred             ccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccccccc
Q 017426           93 KTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC  172 (372)
Q Consensus        93 ~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~  172 (372)
                      ++|++        ||+|++.                             ..|+|++|+.++.+.++++|++. .+.++..
T Consensus        80 ~~~~~--------Gd~V~~~-----------------------------~~g~~~s~~~v~~~~~~~ip~~~-~~~a~l~  121 (329)
T cd08250          80 TDFKV--------GDAVATM-----------------------------SFGAFAEYQVVPARHAVPVPELK-PEVLPLL  121 (329)
T ss_pred             CCCCC--------CCEEEEe-----------------------------cCcceeEEEEechHHeEECCCCc-chhhhcc
Confidence            99999        8888751                             25899999999999999999973 2333344


Q ss_pred             chhHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHH
Q 017426          173 EPLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE  250 (372)
Q Consensus       173 ~~~~~a~~~l~~-~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~  250 (372)
                      ..+.+||+++.. .++++|++++|+|+ |.+|++++|+++..|++ ++++.+++++.+.++++|++.+++.+  ..++.+
T Consensus       122 ~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~--~~~~~~  198 (329)
T cd08250         122 VSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCH-VIGTCSSDEKAEFLKSLGCDRPINYK--TEDLGE  198 (329)
T ss_pred             cHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCe-EEEEeCcHHHHHHHHHcCCceEEeCC--CccHHH
Confidence            477899999854 78999999999986 99999999999999995 77777888888999999987776543  245555


Q ss_pred             HHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCc---------ccc-chhhhccCcEEEeeccC-
Q 017426          251 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM---------TVP-LTPAAVREVDVVGVFRY-  319 (372)
Q Consensus       251 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~---------~~~-~~~~~~~~~~i~~~~~~-  319 (372)
                      .+...   .+.++|++||++|+ ..+..++++++++|+++.++......         ... ......++.++.+.... 
T Consensus       199 ~~~~~---~~~~vd~v~~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (329)
T cd08250         199 VLKKE---YPKGVDVVYESVGG-EMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPH  274 (329)
T ss_pred             HHHHh---cCCCCeEEEECCcH-HHHHHHHHHhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHH
Confidence            55443   24679999999997 58889999999999999998543210         001 12234566777765432 


Q ss_pred             -----CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          320 -----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       320 -----~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                           .+.+.++++++.++.+.+.....+.+++  +++++|++.+..+...+|++++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         275 YAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGL--ESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             HHHHHHHHHHHHHHHHHCCCeeeeECCccccCH--HHHHHHHHHHHcCCCCceEEeC
Confidence                 3457889999999988543334455777  9999999999988888899874

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=3.4e-32  Score=252.28  Aligned_cols=308  Identities=20%  Similarity=0.264  Sum_probs=234.8

Q ss_pred             ceeEEEecCC---ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        18 ~~~~~~~~~~---~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      ||++++++++   .+++.+.|.|.|+++||+|++.++++|++|+....|...  ....+|.++|+|++|+|+++  +++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~g~e~~G~v~~~--~~~~   76 (325)
T cd05280           1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGG--VTRNYPHTPGIDAAGTVVSS--DDPR   76 (325)
T ss_pred             CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCC--CCCCCCCccCcccEEEEEEe--CCCC
Confidence            6788888665   799999999999999999999999999999998877532  11235778999999999998  4667


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-  173 (372)
                      |++        ||+|+....                     ..+ ....|+|++|+.+++++++++|+++++.+++.++ 
T Consensus        77 ~~~--------Gd~V~~~~~---------------------~~g-~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~  126 (325)
T cd05280          77 FRE--------GDEVLVTGY---------------------DLG-MNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGT  126 (325)
T ss_pred             CCC--------CCEEEEccc---------------------ccC-CCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHH
Confidence            899        888875321                     001 1246999999999999999999999999999776 


Q ss_pred             hhHHHHHHHHh---cCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccH
Q 017426          174 PLSVGVHACRR---ANIG-PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI  248 (372)
Q Consensus       174 ~~~~a~~~l~~---~~~~-~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~  248 (372)
                      .+.+||.+++.   .+++ .+++|||+|+ |.+|++++|+|+.+|++ |+++++++++.+.++++|++.+++...    .
T Consensus       127 ~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~----~  201 (325)
T cd05280         127 AGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYT-VVALTGKEEQADYLKSLGASEVLDRED----L  201 (325)
T ss_pred             HHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHhcCCcEEEcchh----H
Confidence            56678887753   3345 3579999998 99999999999999995 788889999999999999988765321    1


Q ss_pred             HHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-ccccchhhhccCcEEEeeccC-------C
Q 017426          249 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-------K  320 (372)
Q Consensus       249 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-------~  320 (372)
                      .....+..  .++++|++||++++ ..+..++++++++|+++.+|..... ..+....+..++.++.+....       .
T Consensus       202 ~~~~~~~~--~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (325)
T cd05280         202 LDESKKPL--LKARWAGAIDTVGG-DVLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRK  278 (325)
T ss_pred             HHHHHHHh--cCCCccEEEECCch-HHHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHH
Confidence            11222221  24579999999998 4889999999999999999864322 233334444677777775432       1


Q ss_pred             CcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          321 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       321 ~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +.++.+.+++..+ +  .+.+..+|++  +++++|++.+.+++..+|+++++
T Consensus       279 ~~~~~~~~~~~~~-~--~~~~~~~~~~--~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         279 QVWQKLATEWKPD-L--LEIVVREISL--EELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             HHHHHHHHHHhcC-C--ccceeeEecH--HHHHHHHHHHhcCCcceEEEEeC
Confidence            2334455555555 3  3346788888  99999999999999999999875

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=3.6e-32  Score=251.92  Aligned_cols=296  Identities=26%  Similarity=0.368  Sum_probs=237.5

Q ss_pred             ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccccccccCCCCC
Q 017426           28 TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGD  107 (372)
Q Consensus        28 ~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~gd~v~~~~Gd  107 (372)
                      .+.+.+.|.|.+.+++|+|||.++++|+.|+..+.+....  ....|.++|+|++|+|+++|++++++++        ||
T Consensus        13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~--------Gd   82 (323)
T cd05282          13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGS--RPPLPAVPGNEGVGVVVEVGSGVSGLLV--------GQ   82 (323)
T ss_pred             eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCC--CCCCCCcCCcceEEEEEEeCCCCCCCCC--------CC
Confidence            6777888889999999999999999999999887764322  1245778999999999999999999999        88


Q ss_pred             EEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-hhHHHHHHHH-hc
Q 017426          108 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RA  185 (372)
Q Consensus       108 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~-~~  185 (372)
                      +|++.+                            ..|+|++|+.++.+.++++|+++++.+++.+. .+.+||+++. .+
T Consensus        83 ~V~~~~----------------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~  134 (323)
T cd05282          83 RVLPLG----------------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYL  134 (323)
T ss_pred             EEEEeC----------------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhc
Confidence            887521                            14899999999999999999999998888665 6678888874 46


Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcce
Q 017426          186 NIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       186 ~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d  264 (372)
                      .+++|+++||+|+ |.+|++++++|+.+|++ ++++.+++++.+.++++|++.++++..  .++...+.+..  .+.++|
T Consensus       135 ~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--~~~~~d  209 (323)
T cd05282         135 KLPPGDWVIQNAANSAVGRMLIQLAKLLGFK-TINVVRRDEQVEELKALGADEVIDSSP--EDLAQRVKEAT--GGAGAR  209 (323)
T ss_pred             cCCCCCEEEEcccccHHHHHHHHHHHHCCCe-EEEEecChHHHHHHHhcCCCEEecccc--hhHHHHHHHHh--cCCCce
Confidence            7899999999987 99999999999999995 677778888888889999988776432  35555555543  356899


Q ss_pred             EEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-ccccchhhhccCcEEEeeccC-----------CCcHHHHHHHHHc
Q 017426          265 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-----------KNTWPLCLELLRS  332 (372)
Q Consensus       265 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-----------~~~~~~~~~ll~~  332 (372)
                      ++||++|+. .....+++++++|+++.++..... ..++...+..++.++.+....           .+.++++++++.+
T Consensus       210 ~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  288 (323)
T cd05282         210 LALDAVGGE-SATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEA  288 (323)
T ss_pred             EEEECCCCH-HHHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhC
Confidence            999999986 567889999999999999865432 233333444477777765432           2357889999999


Q ss_pred             CCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          333 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       333 g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      +.+  .+.+.+.|++  +++++|++.+..+...+|++++
T Consensus       289 ~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         289 GVL--TTPVGAKFPL--EDFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             CCc--ccCccceecH--HHHHHHHHHHhcCCCCceEeeC
Confidence            988  4446788888  9999999999988888999874

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=2.4e-32  Score=235.51  Aligned_cols=293  Identities=17%  Similarity=0.170  Sum_probs=235.1

Q ss_pred             CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEec--CCCccccccccccC
Q 017426           26 VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG--SEVKTLVPGDRVTL  103 (372)
Q Consensus        26 ~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG--~~v~~~~~gd~v~~  103 (372)
                      ++.+++++++.|.|+++|||+|+.|.+++|...-.+.    .......|+-+|...+|.++...  |...+|++      
T Consensus        24 ~d~F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~----d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~------   93 (340)
T COG2130          24 PDDFRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMS----DAPSYAPPVELGEVMVGGTVAKVVASNHPGFQP------   93 (340)
T ss_pred             CCCceeEeccCCCCCcCceEEEEEEeccCHHHeeccc----CCcccCCCcCCCceeECCeeEEEEecCCCCCCC------
Confidence            4689999999999999999999999999995443332    33334567778877766554432  56788999      


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccccc---ccchhHHHHH
Q 017426          104 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA---MCEPLSVGVH  180 (372)
Q Consensus       104 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa---~~~~~~~a~~  180 (372)
                        ||.|..                               ..+|+||..++.+.+.++++..-+..+.   +-++..|||.
T Consensus        94 --GD~V~~-------------------------------~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~  140 (340)
T COG2130          94 --GDIVVG-------------------------------VSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYF  140 (340)
T ss_pred             --CCEEEe-------------------------------cccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHH
Confidence              666664                               4689999999999999998654333333   4458889999


Q ss_pred             HHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH-hCCCeEEecCCCcccHHHHHHHHHH
Q 017426          181 ACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       181 ~l~-~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      +|. .++.++|++|+|.+| |++|..+.|+|+..|. +|+++..+++|..++++ +|.+..++|..  +++.+.+++.  
T Consensus       141 gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~--~d~~~~L~~a--  215 (340)
T COG2130         141 GLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA--EDFAQALKEA--  215 (340)
T ss_pred             HHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc--ccHHHHHHHH--
Confidence            985 589999999999987 9999999999999998 69999999999999987 99999999865  5888887765  


Q ss_pred             HcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC---C----ccccchhhhccCcEEEeeccC-------CCcH
Q 017426          258 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH---E----MTVPLTPAAVREVDVVGVFRY-------KNTW  323 (372)
Q Consensus       258 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~----~~~~~~~~~~~~~~i~~~~~~-------~~~~  323 (372)
                       ...++|+.||++|++ .+...+..|+..+|+..+|.-..   .    ....+..++.+.+++.|+...       .+..
T Consensus       216 -~P~GIDvyfeNVGg~-v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~  293 (340)
T COG2130         216 -CPKGIDVYFENVGGE-VLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEAL  293 (340)
T ss_pred             -CCCCeEEEEEcCCch-HHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHH
Confidence             378999999999985 99999999999999999984221   1    122233456678899998752       3677


Q ss_pred             HHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          324 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       324 ~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +++..|+++|+++.+.  +-+-++  |++++||..+.+|+.+||+|+++
T Consensus       294 ~~l~~wv~~GKi~~~e--ti~dGl--EnaP~Af~gLl~G~N~GK~vvKv  338 (340)
T COG2130         294 RELGGWVKEGKIQYRE--TIVDGL--ENAPEAFIGLLSGKNFGKLVVKV  338 (340)
T ss_pred             HHHHHHHHcCceeeEe--eehhhh--hccHHHHHHHhcCCccceEEEEe
Confidence            8999999999995544  444567  99999999999999999999975

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=6.1e-32  Score=250.78  Aligned_cols=310  Identities=19%  Similarity=0.244  Sum_probs=230.9

Q ss_pred             ceeEEEecCC---ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        18 ~~~~~~~~~~---~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      ||+.++.+++   .+.++++|.|.|.++||+||+.++++|+.|.....+..  .....+|.++|+|++|+|++.|  +++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~--~~~~~~~~~~g~e~~G~V~~~~--~~~   76 (326)
T cd08289           1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGG--KIVKRYPFIPGIDLAGTVVESN--DPR   76 (326)
T ss_pred             CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCc--cccCCCCcCcccceeEEEEEcC--CCC
Confidence            5777777543   48888999999999999999999999999987654311  1113458899999999999954  577


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-  173 (372)
                      |++        ||+|+..+..                     . +....|+|+||+.++++.++++|+++++.+++.++ 
T Consensus        77 ~~~--------Gd~V~~~~~~---------------------~-~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~  126 (326)
T cd08289          77 FKP--------GDEVIVTSYD---------------------L-GVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGT  126 (326)
T ss_pred             CCC--------CCEEEEcccc---------------------c-CCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhh
Confidence            899        8888763210                     0 11246999999999999999999999999999776 


Q ss_pred             hhHHHHHHHHh---cCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccH
Q 017426          174 PLSVGVHACRR---ANI-GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI  248 (372)
Q Consensus       174 ~~~~a~~~l~~---~~~-~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~  248 (372)
                      .+.+||.+++.   ..+ .++++|||+|+ |.+|++++|+|+++|++ ++++.+++++.++++++|++.+++.++  . .
T Consensus       127 ~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~--~-~  202 (326)
T cd08289         127 AGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYE-VVASTGKADAADYLKKLGAKEVIPREE--L-Q  202 (326)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCe-EEEEecCHHHHHHHHHcCCCEEEcchh--H-H
Confidence            45678877743   333 45789999998 99999999999999994 788888899999999999987765432  1 2


Q ss_pred             HHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC-CccccchhhhccCcEEEeeccC---CCcHH
Q 017426          249 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY---KNTWP  324 (372)
Q Consensus       249 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~  324 (372)
                      .+.++++   .+.++|++||++|+ .....++++++++|+++.+|.... ..+.....++.++.++.+....   .....
T Consensus       203 ~~~~~~~---~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (326)
T cd08289         203 EESIKPL---EKQRWAGAVDPVGG-KTLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRR  278 (326)
T ss_pred             HHHHHhh---ccCCcCEEEECCcH-HHHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHH
Confidence            3334433   24679999999997 588899999999999999986432 2233344455778888876422   12233


Q ss_pred             HHHHHHHcCCCC---CCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          325 LCLELLRSGKID---VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       325 ~~~~ll~~g~~~---~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ++++.+.. .+.   ....+.++|++  +++++|++.+.+++..+|+++++
T Consensus       279 ~~~~~~~~-~~~~~~~~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         279 RIWRRLAT-DLKPTQLLNEIKQEITL--DELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             HHHHHHHh-hcCccccccccceEeeH--HHHHHHHHHHhcCcccceEEEeC
Confidence            34333322 221   12345788888  99999999999999999999874

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1.4e-31  Score=247.34  Aligned_cols=305  Identities=25%  Similarity=0.334  Sum_probs=237.0

Q ss_pred             ceeEEEecC---CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        18 ~~~~~~~~~---~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      ||++++..+   ..+.+.+.+.|.+.++||+||+.++++|+.|+....+...   ....|.++|+|++|+|+++|+  ..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~vG~--~~   75 (320)
T cd08243           1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSP---SVKFPRVLGIEAVGEVEEAPG--GT   75 (320)
T ss_pred             CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC---CCCCCccccceeEEEEEEecC--CC
Confidence            466666643   3567778888888999999999999999999988876432   134578899999999999995  56


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-  173 (372)
                      +++        ||+|++.....                      +...+|+|++|+.++++.++++|+++++.+++.+. 
T Consensus        76 ~~~--------Gd~V~~~~~~~----------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~  125 (320)
T cd08243          76 FTP--------GQRVATAMGGM----------------------GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPE  125 (320)
T ss_pred             CCC--------CCEEEEecCCC----------------------CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcch
Confidence            888        88887632100                      01235999999999999999999999998888766 


Q ss_pred             hhHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHH
Q 017426          174 PLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE  251 (372)
Q Consensus       174 ~~~~a~~~l~~-~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~  251 (372)
                      ++.+||+++.. ..+++|++|||+|+ |.+|++++|+|+.+|++ ++++..++++.+.++++|++.++. .  ..++.+.
T Consensus       126 ~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~-~--~~~~~~~  201 (320)
T cd08243         126 TYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGAT-VTATTRSPERAALLKELGADEVVI-D--DGAIAEQ  201 (320)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHhcCCcEEEe-c--CccHHHH
Confidence            77899999865 67899999999997 99999999999999995 777778899999999999987653 2  3456665


Q ss_pred             HHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCcc---ccchhh--hccCcEEEeeccC---CCcH
Q 017426          252 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT---VPLTPA--AVREVDVVGVFRY---KNTW  323 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~--~~~~~~i~~~~~~---~~~~  323 (372)
                      ++++    +.++|++||++|+ ..+..++++++++|+++.+|.......   ......  ..++..+.+....   .+.+
T Consensus       202 i~~~----~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (320)
T cd08243         202 LRAA----PGGFDKVLELVGT-ATLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPL  276 (320)
T ss_pred             HHHh----CCCceEEEECCCh-HHHHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHH
Confidence            6554    4689999999997 588899999999999999986322211   111111  2455666665432   2457


Q ss_pred             HHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEE
Q 017426          324 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  370 (372)
Q Consensus       324 ~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv  370 (372)
                      ++++++++++.+.  +.+.+.|++  +++++|++.+.++...+|+++
T Consensus       277 ~~~~~~~~~~~~~--~~~~~~~~l--~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         277 QELFDFVAAGHLD--IPPSKVFTF--DEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             HHHHHHHHCCcee--cccccEEcH--HHHHHHHHHHHhCCCCCcEEe
Confidence            8899999999884  446677888  999999999998888888876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=1.3e-31  Score=248.21  Aligned_cols=306  Identities=21%  Similarity=0.289  Sum_probs=231.5

Q ss_pred             eeEEEe---cCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccc
Q 017426           19 MAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (372)
Q Consensus        19 ~~~~~~---~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (372)
                      ||+++.   ++..++++++|.|.+.++||+||+.++++|+.|+....|...  .....|.++|+|++|+|++  +++.+|
T Consensus         1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~g~e~~G~V~~--~~~~~~   76 (323)
T TIGR02823         1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGG--VVRSYPMIPGIDAAGTVVS--SEDPRF   76 (323)
T ss_pred             CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCC--CCCCCCccceeeeEEEEEe--cCCCCC
Confidence            455655   345778999999999999999999999999999998877542  1124588899999999998  567789


Q ss_pred             cccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-h
Q 017426           96 VPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-P  174 (372)
Q Consensus        96 ~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~  174 (372)
                      ++        ||+|++.....                      +...+|+|++|+.++++.++++|+++++.+++.++ .
T Consensus        77 ~~--------Gd~V~~~~~~~----------------------~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~  126 (323)
T TIGR02823        77 RE--------GDEVIVTGYGL----------------------GVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTA  126 (323)
T ss_pred             CC--------CCEEEEccCCC----------------------CCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhh
Confidence            99        88887632100                      01236999999999999999999999999988776 4


Q ss_pred             hHHHHHHHH---hcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHH
Q 017426          175 LSVGVHACR---RANIGPET-NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIA  249 (372)
Q Consensus       175 ~~~a~~~l~---~~~~~~g~-~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~  249 (372)
                      +.+|+.+++   .+.+.+|+ ++||+|+ |.+|++++|+|+.+|++ ++++..++++.+.++++|++.+++..+  .+  
T Consensus       127 ~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~--  201 (323)
T TIGR02823       127 GFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYE-VVASTGKAEEEDYLKELGASEVIDRED--LS--  201 (323)
T ss_pred             HHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHhcCCcEEEcccc--HH--
Confidence            567776653   35588998 9999998 99999999999999995 566667777778889999987765322  12  


Q ss_pred             HHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC-CccccchhhhccCcEEEeeccC-------CC
Q 017426          250 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-------KN  321 (372)
Q Consensus       250 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-------~~  321 (372)
                      ..++.+.   .+++|+++|++|+. .+..++++++++|+++.+|.... ........+..++.++.+....       .+
T Consensus       202 ~~~~~~~---~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (323)
T TIGR02823       202 PPGKPLE---KERWAGAVDTVGGH-TLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREA  277 (323)
T ss_pred             HHHHHhc---CCCceEEEECccHH-HHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHH
Confidence            1233332   34599999999975 78899999999999999986432 2222334445677777775432       12


Q ss_pred             cHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          322 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       322 ~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      .++.+.+++..+.+  .+. .+.|++  +++++|++.+.+++..+|+++++
T Consensus       278 ~~~~~~~~~~~~~~--~~~-~~~~~l--~~~~~a~~~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       278 AWQRLATDLKPRNL--ESI-TREITL--EELPEALEQILAGQHRGRTVVDV  323 (323)
T ss_pred             HHHHHHHHhhcCCC--cCc-eeeecH--HHHHHHHHHHhCCCccceEEEeC
Confidence            35566667777776  333 457888  99999999999999999999874

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=3e-31  Score=247.16  Aligned_cols=307  Identities=22%  Similarity=0.278  Sum_probs=237.1

Q ss_pred             ceeEEEecCCc------eeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCC
Q 017426           18 NMAAWLLGVNT------LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (372)
Q Consensus        18 ~~~~~~~~~~~------l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (372)
                      |++.++++++.      +...++|.|.+.+++|+|++.++++|+.|+....+..+   ...+|.++|+|++|+|+++|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~~G~~   77 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAP---VPGQPKILGWDASGVVEAVGSE   77 (336)
T ss_pred             CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCC---CCCCCcccccceEEEEEEcCCC
Confidence            46777776543      56667888888999999999999999999988765331   1345778999999999999999


Q ss_pred             CccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccc
Q 017426           92 VKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAM  171 (372)
Q Consensus        92 v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~  171 (372)
                      +..|++        ||+|+....                         ...+|+|++|+.++.++++++|+++++++++.
T Consensus        78 v~~~~~--------Gd~V~~~~~-------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~  124 (336)
T cd08252          78 VTLFKV--------GDEVYYAGD-------------------------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAA  124 (336)
T ss_pred             CCCCCC--------CCEEEEcCC-------------------------CCCCccceEEEEEchHHeeeCCCCCCHHHhhh
Confidence            999999        887765210                         02369999999999999999999999998887


Q ss_pred             cc-hhHHHHHHH-HhcCCCC-----CCEEEEECC-CHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHHhCCCeEEecC
Q 017426          172 CE-PLSVGVHAC-RRANIGP-----ETNVLIMGA-GPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKEIGADNIVKVS  242 (372)
Q Consensus       172 ~~-~~~~a~~~l-~~~~~~~-----g~~vlI~Ga-g~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~lg~~~v~~~~  242 (372)
                      ++ .+.+||+++ +.+.+++     |++|+|+|+ |.+|++++|+++.+| + .++++++++++.++++++|++.+++..
T Consensus       125 ~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~  203 (336)
T cd08252         125 LPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKELGADHVINHH  203 (336)
T ss_pred             hhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCC
Confidence            76 556788887 4577777     999999986 999999999999999 7 678888889999999999998876543


Q ss_pred             CCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC---
Q 017426          243 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY---  319 (372)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~---  319 (372)
                         .++.+.++..   .+.++|++||++|+...+..++++++++|+++.++...  ..++...+..++.++.+....   
T Consensus       204 ---~~~~~~i~~~---~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~  275 (336)
T cd08252         204 ---QDLAEQLEAL---GIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLKSKSASFHWEFMFTRS  275 (336)
T ss_pred             ---ccHHHHHHhh---CCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--CcccchhhhcccceEEEEEeeccc
Confidence               2455555432   34689999999997678899999999999999997543  223333344556665553221   


Q ss_pred             ----------CCcHHHHHHHHHcCCCCCCCc-eEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          320 ----------KNTWPLCLELLRSGKIDVKPL-VTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       320 ----------~~~~~~~~~ll~~g~~~~~~~-~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                                .+.++++++++.++.+.+... ..+.+++  +++++|++.+.++...+|++++
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         276 MFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINA--ENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             cccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCH--HHHHHHHHHHHcCCccceEEeC
Confidence                      134778999999998843211 1233566  9999999999999888999874

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=1e-30  Score=241.68  Aligned_cols=312  Identities=28%  Similarity=0.413  Sum_probs=244.2

Q ss_pred             ceeEEEecC---CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        18 ~~~~~~~~~---~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      ||++++..+   ..+.+.+.|.|.+.+++++|++.++++|++|+....|....  ....|.++|+|++|+|+++|+++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~   78 (325)
T cd08253           1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPG--LPPLPYVPGSDGAGVVEAVGEGVDG   78 (325)
T ss_pred             CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCC--CCCCCeecccceEEEEEeeCCCCCC
Confidence            466676643   45888899999999999999999999999999887764321  1346889999999999999999999


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-  173 (372)
                      |++        ||+|+.....                       .....|++++|+.++++.++++|+++++.+++.+. 
T Consensus        79 ~~~--------Gd~v~~~~~~-----------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~  127 (325)
T cd08253          79 LKV--------GDRVWLTNLG-----------------------WGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGI  127 (325)
T ss_pred             CCC--------CCEEEEeccc-----------------------cCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhh
Confidence            999        8888763210                       00136899999999999999999999999988776 


Q ss_pred             hhHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHH
Q 017426          174 PLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE  251 (372)
Q Consensus       174 ~~~~a~~~l~~-~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~  251 (372)
                      ++.+||+++.. .++++|++++|+|+ +.+|++++++++..|+ .++++.+++++.+.++++|++.+++.  ...++.+.
T Consensus       128 ~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~  204 (325)
T cd08253         128 PALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNY--RAEDLADR  204 (325)
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeC--CCcCHHHH
Confidence            77889998854 88999999999987 9999999999999998 57888888899998899998877654  33456666


Q ss_pred             HHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-------CCcHH
Q 017426          252 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-------KNTWP  324 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-------~~~~~  324 (372)
                      +.++.  .+.++|++||+.++. .....+++++++|+++.++............+..+..++.+...+       .+.++
T Consensus       205 ~~~~~--~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (325)
T cd08253         205 ILAAT--AGQGVDVIIEVLANV-NLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAE  281 (325)
T ss_pred             HHHHc--CCCceEEEEECCchH-HHHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHH
Confidence            65543  246899999999975 678889999999999999764322233334434555666554332       23456


Q ss_pred             HHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          325 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       325 ~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      .+.+++.++.+  .+..++.|++  ++++++++.+.++...+|++++.
T Consensus       282 ~~~~~~~~~~i--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         282 AIAAGLADGAL--RPVIAREYPL--EEAAAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             HHHHHHHCCCc--cCccccEEcH--HHHHHHHHHHHcCCCcceEEEeC
Confidence            67778888887  4456778888  99999999999888899999864

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=2.6e-31  Score=249.08  Aligned_cols=307  Identities=24%  Similarity=0.318  Sum_probs=230.8

Q ss_pred             ceeEEEecCCc----eeEEEecCCCC-CCCcEEEEEeeeeeCcccHHhhhhcccC-------C-----cccCCCcccccc
Q 017426           18 NMAAWLLGVNT----LKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCA-------D-----FVVKEPMVIGHE   80 (372)
Q Consensus        18 ~~~~~~~~~~~----l~~~~~~~p~~-~~~evlV~v~~~~~~~~d~~~~~g~~~~-------~-----~~~~~p~~~G~e   80 (372)
                      ||++++.+.+.    +.+.+.+.|.| .++||+|+|.++++|+.|+....|...+       .     ....+|.++|+|
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e   80 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD   80 (350)
T ss_pred             CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence            57777665433    88889999999 5999999999999999999988763210       0     023558899999


Q ss_pred             eeEEEEEecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEEC
Q 017426           81 CAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL  160 (372)
Q Consensus        81 ~~G~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~  160 (372)
                      ++|+|+++|+++++|++        ||+|++.+..                         ...|+|++|+.++++.++++
T Consensus        81 ~~G~v~~vG~~v~~~~~--------Gd~V~~~~~~-------------------------~~~g~~~~~~~v~~~~~~~l  127 (350)
T cd08248          81 CSGVVVDIGSGVKSFEI--------GDEVWGAVPP-------------------------WSQGTHAEYVVVPENEVSKK  127 (350)
T ss_pred             eEEEEEecCCCcccCCC--------CCEEEEecCC-------------------------CCCccceeEEEecHHHeecC
Confidence            99999999999999999        8888763211                         13599999999999999999


Q ss_pred             CCCCCcccccccc-hhHHHHHHHHh-cCCC----CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh
Q 017426          161 PDNVSLEEGAMCE-PLSVGVHACRR-ANIG----PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI  233 (372)
Q Consensus       161 P~~~~~~~aa~~~-~~~~a~~~l~~-~~~~----~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l  233 (372)
                      |+++++.+++.+. .+.+||+++.. +.+.    +|++++|+|+ |.+|++++++++.+|++ ++++.++ ++.+.++++
T Consensus       128 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~-v~~~~~~-~~~~~~~~~  205 (350)
T cd08248         128 PKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAH-VTTTCST-DAIPLVKSL  205 (350)
T ss_pred             CCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCc-chHHHHHHh
Confidence            9999998888776 67789998854 5565    4999999986 99999999999999995 5666544 677888999


Q ss_pred             CCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCc----cc----cchh
Q 017426          234 GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM----TV----PLTP  305 (372)
Q Consensus       234 g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~----~~~~  305 (372)
                      |++.+++..  ..++.+.+..     .+++|++||++|+. ....++++++++|+++.++......    ..    ....
T Consensus       206 g~~~~~~~~--~~~~~~~l~~-----~~~vd~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  277 (350)
T cd08248         206 GADDVIDYN--NEDFEEELTE-----RGKFDVILDTVGGD-TEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSA  277 (350)
T ss_pred             CCceEEECC--ChhHHHHHHh-----cCCCCEEEECCChH-HHHHHHHHhccCCEEEEecCCcccccccccccchhhhhH
Confidence            988776543  2344443322     36799999999986 8889999999999999997532110    01    0011


Q ss_pred             hhccCcE---------E-Eee-ccCCCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          306 AAVREVD---------V-VGV-FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       306 ~~~~~~~---------i-~~~-~~~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      .......         + .+. ....+.+.+++++++++.+  .+.+++.|++  +++++|++.+.++...+|++++
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~  350 (350)
T cd08248         278 VDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKI--KPVIDKVFPF--EEVPEAYEKVESGHARGKTVIK  350 (350)
T ss_pred             HHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCE--ecccceeecH--HHHHHHHHHHhcCCCceEEEeC
Confidence            1111110         1 111 1124568899999999988  4457788888  9999999999888778888864

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=2.2e-30  Score=240.12  Aligned_cols=307  Identities=20%  Similarity=0.260  Sum_probs=233.9

Q ss_pred             ceeEEEecCC---ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        18 ~~~~~~~~~~---~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      ||++++.+++   .+++++.|.|+|+++||+|++.++++|+.|.....|...  ....+|.++|+|++|+|++  +++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~g~e~~G~V~~--~~~~~   76 (324)
T cd08288           1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGG--IVRTFPLVPGIDLAGTVVE--SSSPR   76 (324)
T ss_pred             CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCcc--ccCCCCCccccceEEEEEe--CCCCC
Confidence            6788887654   688999999999999999999999999999988776431  1123577899999999999  77788


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-  173 (372)
                      +++        ||+|+....              +.+        ...+|+|++|+.++.+.++++|+++++++++.++ 
T Consensus        77 ~~~--------Gd~V~~~~~--------------~~~--------~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~  126 (324)
T cd08288          77 FKP--------GDRVVLTGW--------------GVG--------ERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGT  126 (324)
T ss_pred             CCC--------CCEEEECCc--------------cCC--------CCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhh
Confidence            999        888775311              000        0135899999999999999999999999888776 


Q ss_pred             hhHHHHHHHH---hcCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccH
Q 017426          174 PLSVGVHACR---RANIG-PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI  248 (372)
Q Consensus       174 ~~~~a~~~l~---~~~~~-~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~  248 (372)
                      .+.+++.+++   ..... +++++||+|+ |.+|++++|+|+.+|++ ++++.+++++.+.++++|++.++++.+    +
T Consensus       127 ~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~----~  201 (324)
T cd08288         127 AGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYE-VVASTGRPEEADYLRSLGASEIIDRAE----L  201 (324)
T ss_pred             HHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHhcCCCEEEEcch----h
Confidence            5566766653   44555 6789999998 99999999999999995 777778889999999999988876532    2


Q ss_pred             HHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC-CccccchhhhccCcEEEeeccC-------C
Q 017426          249 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-------K  320 (372)
Q Consensus       249 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-------~  320 (372)
                      ...++.+.   ..++|.+||++++ ......+..++.+|+++.+|.... ........+..++.++.+....       .
T Consensus       202 ~~~~~~~~---~~~~~~~~d~~~~-~~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (324)
T cd08288         202 SEPGRPLQ---KERWAGAVDTVGG-HTLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRR  277 (324)
T ss_pred             hHhhhhhc---cCcccEEEECCcH-HHHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhH
Confidence            22333332   3468999999997 367788888999999999885421 1123333444677777775321       2


Q ss_pred             CcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          321 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       321 ~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +.++.+.+++.++.+  .+ +.+.+++  +++++|++.+.+++..+|+++++
T Consensus       278 ~~~~~~~~~~~~~~~--~~-i~~~~~~--~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         278 AAWARLARDLDPALL--EA-LTREIPL--ADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             HHHHHHHHHHhcCCc--cc-cceeecH--HHHHHHHHHHhcCCccCeEEEeC
Confidence            356677788888877  33 3678888  99999999999999999999874

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=2.4e-30  Score=238.91  Aligned_cols=305  Identities=25%  Similarity=0.364  Sum_probs=241.2

Q ss_pred             ceeEEEec---CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        18 ~~~~~~~~---~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      ||++++..   +..+++.+.+.|.+.++|++||+.++++|+.|+....+....  ...+|.++|+|++|+|+++|++++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vg~~~~~   78 (323)
T cd05276           1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPP--PPGASDILGLEVAGVVVAVGPGVTG   78 (323)
T ss_pred             CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCC--CCCCCCcccceeEEEEEeeCCCCCC
Confidence            57878775   456778888888889999999999999999999887664321  1345789999999999999999999


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-  173 (372)
                      +++        ||+|+..                            ..+|+|++|+.++++.++++|+++++.+++.+. 
T Consensus        79 ~~~--------Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~  122 (323)
T cd05276          79 WKV--------GDRVCAL----------------------------LAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPE  122 (323)
T ss_pred             CCC--------CCEEEEe----------------------------cCCCceeEEEEcCHHHhccCCCCCCHHHHhhchh
Confidence            999        8888752                            134899999999999999999999998888665 


Q ss_pred             hhHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHH
Q 017426          174 PLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE  251 (372)
Q Consensus       174 ~~~~a~~~l~-~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~  251 (372)
                      ++.++|+++. ...++++++++|+|+ |.+|++++++++..|++ ++++.+++++.+.++++|++.+++..  ..++.+.
T Consensus       123 ~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~  199 (323)
T cd05276         123 VFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGAR-VIATAGSEEKLEACRALGADVAINYR--TEDFAEE  199 (323)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHcCCCEEEeCC--chhHHHH
Confidence            7788999875 478899999999997 99999999999999995 78887888888888889987766532  3455555


Q ss_pred             HHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC-CccccchhhhccCcEEEeeccCC----------
Q 017426          252 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRYK----------  320 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~----------  320 (372)
                      +.+..  .+.++|++||+.|+. .+...+++++++|+++.++.... ........+..+++++.++....          
T Consensus       200 ~~~~~--~~~~~d~vi~~~g~~-~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (323)
T cd05276         200 VKEAT--GGRGVDVILDMVGGD-YLARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALA  276 (323)
T ss_pred             HHHHh--CCCCeEEEEECCchH-HHHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHH
Confidence            55543  246899999999975 57889999999999999875432 22333334445777777764321          


Q ss_pred             -CcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEE
Q 017426          321 -NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  370 (372)
Q Consensus       321 -~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv  370 (372)
                       +.++++++++.++.+  .+..++.|++  +++++|++.+.++...+|+++
T Consensus       277 ~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~  323 (323)
T cd05276         277 AAFREHVWPLFASGRI--RPVIDKVFPL--EEAAEAHRRMESNEHIGKIVL  323 (323)
T ss_pred             HHHHHHHHHHHHCCCc--cCCcceEEcH--HHHHHHHHHHHhCCCcceEeC
Confidence             235678888888888  4457788888  999999999998878888874

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=1.6e-30  Score=241.53  Aligned_cols=293  Identities=20%  Similarity=0.206  Sum_probs=226.2

Q ss_pred             CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccccccccCCC
Q 017426           26 VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVP  105 (372)
Q Consensus        26 ~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~gd~v~~~~  105 (372)
                      ++.+++.++|.|.+.++||+||+.++++|+.|.....+...-......+.++|+|++|+|+++|++  +|++        
T Consensus        17 ~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~--------   86 (329)
T cd05288          17 PDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKV--------   86 (329)
T ss_pred             ccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCC--------
Confidence            357899999999999999999999999999877655442110011123457899999999999964  7899        


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecC-CceEECCCCCC--cccccc-c-chhHHHHH
Q 017426          106 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA-DLCFKLPDNVS--LEEGAM-C-EPLSVGVH  180 (372)
Q Consensus       106 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~-~~~~~~P~~~~--~~~aa~-~-~~~~~a~~  180 (372)
                      ||+|+.                               .++|++|+.+++ +.++++|++++  +.+++. + ..+.+||+
T Consensus        87 Gd~V~~-------------------------------~~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~  135 (329)
T cd05288          87 GDLVSG-------------------------------FLGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYF  135 (329)
T ss_pred             CCEEec-------------------------------ccceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHH
Confidence            888874                               258999999999 99999999985  433333 4 47788999


Q ss_pred             HHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH-hCCCeEEecCCCcccHHHHHHHHHH
Q 017426          181 ACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       181 ~l~~-~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      ++.. +.+.++++|||+|+ |.+|++++|+++..|+ .++++++++++.+.+++ +|++.++++..  .++.+.+.++. 
T Consensus       136 ~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~v~~~~-  211 (329)
T cd05288         136 GLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKT--PDLAEALKEAA-  211 (329)
T ss_pred             HHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhhcCCceEEecCC--hhHHHHHHHhc-
Confidence            8854 78899999999986 9999999999999999 57888888999998888 99988776533  45666665553 


Q ss_pred             HcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCcc------ccchhhhccCcEEEeeccC------CCcHHH
Q 017426          258 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT------VPLTPAAVREVDVVGVFRY------KNTWPL  325 (372)
Q Consensus       258 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~------~~~~~~~~~~~~i~~~~~~------~~~~~~  325 (372)
                        ++++|++||++|+ ..+..++++++++|+++.+|.......      ++......++.++.+....      .+.+.+
T Consensus       212 --~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (329)
T cd05288         212 --PDGIDVYFDNVGG-EILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAE  288 (329)
T ss_pred             --cCCceEEEEcchH-HHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHH
Confidence              3689999999997 488899999999999999985433211      1233445677777775432      245788


Q ss_pred             HHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEE
Q 017426          326 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  370 (372)
Q Consensus       326 ~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv  370 (372)
                      +++++.++.+.+.  ....+++  ++++++++.+.+++..+|+++
T Consensus       289 ~~~~~~~g~i~~~--~~~~~~l--~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         289 LAKWLAEGKLKYR--EDVVEGL--ENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             HHHHHHCCCcccc--ccccccH--HHHHHHHHHHhcCCCccceeC
Confidence            8999999998543  3455677  999999999998888888874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=7.4e-31  Score=236.62  Aligned_cols=266  Identities=36%  Similarity=0.620  Sum_probs=216.8

Q ss_pred             cEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccccccccCCCCCEEEEcCCcCCCCCcc
Q 017426           43 DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDH  122 (372)
Q Consensus        43 evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~  122 (372)
                      ||+|+|.++++|+.|+....|...  ....+|.++|+|++|+|+++|++++.|++        ||+|+..+..+|++|++
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~G~e~~G~v~~~G~~v~~~~~--------Gd~V~~~~~~~~~~~~~   70 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYP--PPPKLPLILGHEGAGVVVEVGPGVTGVKV--------GDRVVVLPNLGCGTCEL   70 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCC--cCCCCCcccccccEEEEEEECCCCCcCCC--------CCEEEEcCCCCCCCCHH
Confidence            689999999999999999887542  12355789999999999999999999999        99999999999999999


Q ss_pred             ccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-hhHHHHHHHHh-cCCCCCCEEEEECCCH
Q 017426          123 CKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACRR-ANIGPETNVLIMGAGP  200 (372)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~g~~vlI~Gag~  200 (372)
                      |..    .|+.....+ ....|+|++|+.++.+.++++|+++++.+++.++ ++.+||++++. ..++++++|||+|+|.
T Consensus        71 ~~~----~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~  145 (271)
T cd05188          71 CRE----LCPGGGILG-EGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG  145 (271)
T ss_pred             HHh----hCCCCCEec-cccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH
Confidence            997    676665444 3568999999999999999999999999999884 88899999866 5568999999999855


Q ss_pred             HHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHH
Q 017426          201 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTAL  280 (372)
Q Consensus       201 ~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~  280 (372)
                      +|++++++++..|. .++++++++++.+.++++|++.++++.  ..++.+.+.   ...+.++|++||++++......++
T Consensus       146 ~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~---~~~~~~~d~vi~~~~~~~~~~~~~  219 (271)
T cd05188         146 VGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYK--EEDLEEELR---LTGGGGADVVIDAVGGPETLAQAL  219 (271)
T ss_pred             HHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCC--cCCHHHHHH---HhcCCCCCEEEECCCCHHHHHHHH
Confidence            99999999999997 688888999999999999988766533  344555444   224678999999999856888999


Q ss_pred             HHhccCCEEEEEcCCCCCccc-cchhhhccCcEEEeeccC-CCcHHHHHHH
Q 017426          281 GATCAGGKVCLVGMGHHEMTV-PLTPAAVREVDVVGVFRY-KNTWPLCLEL  329 (372)
Q Consensus       281 ~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~i~~~~~~-~~~~~~~~~l  329 (372)
                      +.++++|+++.++........ .......+++++.++..+ ..++++++++
T Consensus       220 ~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (271)
T cd05188         220 RLLRPGGRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDL  270 (271)
T ss_pred             HhcccCCEEEEEccCCCCCCcccHHHHHhcceEEEEeecCCHHHHHHHHhh
Confidence            999999999999865443222 234466788888887765 4466666665

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3e-30  Score=238.91  Aligned_cols=307  Identities=28%  Similarity=0.373  Sum_probs=238.0

Q ss_pred             ceeEEEecCC---ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        18 ~~~~~~~~~~---~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      ||++++.+++   .+.+.+.+.|.+.++||+|++.++++|+.|+.+..+...  .....|.++|+|++|+|+++|+++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~v~~~G~~~~~   78 (326)
T cd08272           1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAA--ARPPLPAILGCDVAGVVEAVGEGVTR   78 (326)
T ss_pred             CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCC--CCCCCCcccccceeEEEEEeCCCCCC
Confidence            5788887543   477888888888999999999999999999988776432  11234778999999999999999999


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-  173 (372)
                      |++        ||+|+....           +            .....|+|++|+.++.++++++|+++++.+++.++ 
T Consensus        79 ~~~--------Gd~V~~~~~-----------~------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~  127 (326)
T cd08272          79 FRV--------GDEVYGCAG-----------G------------LGGLQGSLAEYAVVDARLLALKPANLSMREAAALPL  127 (326)
T ss_pred             CCC--------CCEEEEccC-----------C------------cCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHH
Confidence            999        888775210           0            00135899999999999999999999998888766 


Q ss_pred             hhHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHH
Q 017426          174 PLSVGVHAC-RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE  251 (372)
Q Consensus       174 ~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~  251 (372)
                      .+.+||+++ +..++++|++++|+|+ |.+|++++++++..|++ ++++.++ ++.++++++|++.+++..  .. +.+.
T Consensus       128 ~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~-v~~~~~~-~~~~~~~~~g~~~~~~~~--~~-~~~~  202 (326)
T cd08272         128 VGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGAR-VYATASS-EKAAFARSLGADPIIYYR--ET-VVEY  202 (326)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCE-EEEEech-HHHHHHHHcCCCEEEecc--hh-HHHH
Confidence            667888887 5688999999999986 99999999999999995 6677677 888888999987766532  23 5555


Q ss_pred             HHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC------------
Q 017426          252 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY------------  319 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~------------  319 (372)
                      +.++.  .+.++|+++|++++. .....+++++++|+++.++... .  ..+.....++..+.+....            
T Consensus       203 ~~~~~--~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (326)
T cd08272         203 VAEHT--GGRGFDVVFDTVGGE-TLDASFEAVALYGRVVSILGGA-T--HDLAPLSFRNATYSGVFTLLPLLTGEGRAHH  276 (326)
T ss_pred             HHHhc--CCCCCcEEEECCChH-HHHHHHHHhccCCEEEEEecCC-c--cchhhHhhhcceEEEEEcccccccccchhhH
Confidence            65543  345799999999974 7788999999999999987543 1  1222223455555554321            


Q ss_pred             CCcHHHHHHHHHcCCCCCCCceE-EEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          320 KNTWPLCLELLRSGKIDVKPLVT-HRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       320 ~~~~~~~~~ll~~g~~~~~~~~~-~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      .+.+.++++++.++.+  .+.++ +.|++  ++++++++.+.++...+|+++++
T Consensus       277 ~~~~~~~~~~l~~~~l--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         277 GEILREAARLVERGQL--RPLLDPRTFPL--EEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             HHHHHHHHHHHHCCCc--ccccccceecH--HHHHHHHHHHHcCCcccEEEEEC
Confidence            2457788889989887  34433 77888  99999999998888889999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=5.3e-30  Score=237.37  Aligned_cols=308  Identities=26%  Similarity=0.330  Sum_probs=238.0

Q ss_pred             ceeEEEecCC---ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        18 ~~~~~~~~~~---~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      ||++++.++.   .+.+.+.|.|.+.+++|+|++.++++|+.|+....+....   ...|.++|+|++|+|+.+|++++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~---~~~~~~~g~e~~G~v~~~G~~~~~   77 (325)
T cd08271           1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPA---WSYPHVPGVDGAGVVVAVGAKVTG   77 (325)
T ss_pred             CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC---CCCCcccccceEEEEEEeCCCCCc
Confidence            6888888777   8999999999999999999999999999999887654311   123678999999999999999999


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-  173 (372)
                      +++        ||+|++...                         ....|+|++|+.++.+.++++|+++++.+++.+. 
T Consensus        78 ~~~--------Gd~V~~~~~-------------------------~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~  124 (325)
T cd08271          78 WKV--------GDRVAYHAS-------------------------LARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPC  124 (325)
T ss_pred             CCC--------CCEEEeccC-------------------------CCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhh
Confidence            999        888875321                         0135899999999999999999999998888765 


Q ss_pred             hhHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHH
Q 017426          174 PLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE  251 (372)
Q Consensus       174 ~~~~a~~~l~-~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~  251 (372)
                      .+.+|++++. .+++++|++++|+|+ +.+|++++++++..|+. ++++. ++++.+.+..+|++.+++.  ...++.+.
T Consensus       125 ~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~-v~~~~-~~~~~~~~~~~g~~~~~~~--~~~~~~~~  200 (325)
T cd08271         125 AGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLR-VITTC-SKRNFEYVKSLGADHVIDY--NDEDVCER  200 (325)
T ss_pred             hHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEEE-cHHHHHHHHHcCCcEEecC--CCccHHHH
Confidence            7788999885 478899999999998 89999999999999995 55554 6677788888998776643  33455555


Q ss_pred             HHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCc--cccchhhhccCcEEEeeccC---------C
Q 017426          252 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM--TVPLTPAAVREVDVVGVFRY---------K  320 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~---------~  320 (372)
                      +.++.  .+.++|++++++++. .....+++++++|+++.++......  .........+.+++......         .
T Consensus       201 ~~~~~--~~~~~d~vi~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (325)
T cd08271         201 IKEIT--GGRGVDAVLDTVGGE-TAAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLR  277 (325)
T ss_pred             HHHHc--CCCCCcEEEECCCcH-hHHHHHHhhccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHH
Confidence            65543  346799999999985 5567899999999999986432211  11112233344444333221         2


Q ss_pred             CcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          321 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       321 ~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +.+.+++++++++.+  .+...+.|++  +++.++++.+.++...+|+++++
T Consensus       278 ~~~~~~~~~~~~~~i--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         278 YAGEELLELLAAGKL--EPLVIEVLPF--EQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             HHHHHHHHHHHCCCe--eeccceEEcH--HHHHHHHHHHHcCCccceEEEEC
Confidence            345778899999888  3445677888  99999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=5.2e-30  Score=240.48  Aligned_cols=315  Identities=20%  Similarity=0.263  Sum_probs=227.3

Q ss_pred             eeEEEecC-CceeEEEecCCCC---CCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCc-
Q 017426           19 MAAWLLGV-NTLKIQPFELPSL---GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK-   93 (372)
Q Consensus        19 ~~~~~~~~-~~l~~~~~~~p~~---~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~-   93 (372)
                      |++++.++ +.++++.++.|.|   ++++|+||+.++++|+.|+....+...  .....|.++|+|++|+|+++|++++ 
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~V~~vG~~v~~   79 (352)
T cd08247           2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTF--HFKVKEKGLGRDYSGVIVKVGSNVAS   79 (352)
T ss_pred             ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhccccc--ccccCCCccCceeEEEEEEeCccccc
Confidence            45566644 4566666666555   899999999999999999987653211  1112377899999999999999998 


Q ss_pred             cccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC----ceEECCCCCCcccc
Q 017426           94 TLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD----LCFKLPDNVSLEEG  169 (372)
Q Consensus        94 ~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~----~~~~~P~~~~~~~a  169 (372)
                      +|++        ||+|++.....|                       ...|+|++|+.++.+    .++++|+++++.++
T Consensus        80 ~~~~--------Gd~V~~~~~~~~-----------------------~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~a  128 (352)
T cd08247          80 EWKV--------GDEVCGIYPHPY-----------------------GGQGTLSQYLLVDPKKDKKSITRKPENISLEEA  128 (352)
T ss_pred             CCCC--------CCEEEEeecCCC-----------------------CCCceeeEEEEEccccccceeEECCCCCCHHHH
Confidence            8999        888876322110                       136999999999997    78999999999999


Q ss_pred             cccc-hhHHHHHHHHh-c-CCCCCCEEEEECC-CHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHHhCCCeEEecCCC
Q 017426          170 AMCE-PLSVGVHACRR-A-NIGPETNVLIMGA-GPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKEIGADNIVKVSTN  244 (372)
Q Consensus       170 a~~~-~~~~a~~~l~~-~-~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~  244 (372)
                      +.++ .+.+||+++.. . ++++|++++|+|+ +.+|++++|+|+.+| .+.++++.+ +++.++++++|++.+++++..
T Consensus       129 a~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~~~g~~~~i~~~~~  207 (352)
T cd08247         129 AAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNKKLGADHFIDYDAH  207 (352)
T ss_pred             HHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHHHhCCCEEEecCCC
Confidence            9876 66789999865 4 6999999999988 899999999999975 435666654 555567789999887765432


Q ss_pred             cc-cHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhc---cCCEEEEEc-CCCCC-cc----------c----cch
Q 017426          245 LQ-DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATC---AGGKVCLVG-MGHHE-MT----------V----PLT  304 (372)
Q Consensus       245 ~~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~---~~G~~v~~g-~~~~~-~~----------~----~~~  304 (372)
                      .. .+...+.+.. +++.++|++|||+|+......++++++   ++|+++.++ ..... ..          .    ...
T Consensus       208 ~~~~~~~~~~~~~-~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (352)
T cd08247         208 SGVKLLKPVLENV-KGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFG  286 (352)
T ss_pred             cccchHHHHHHhh-cCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhh
Confidence            10 0333332222 125689999999998667888999999   999999874 22111 00          0    111


Q ss_pred             hhhccCcEEEeeccC--CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          305 PAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       305 ~~~~~~~~i~~~~~~--~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ...+...++......  .+.++++++++.++.+  .+.+.+++++  +++++|++.+.++...+|+++++
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         287 SLGLWSYNYQFFLLDPNADWIEKCAELIADGKV--KPPIDSVYPF--EDYKEAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             hhcCCCcceEEEEecCCHHHHHHHHHHHhCCCe--EeeeccEecH--HHHHHHHHHHHcCCCCCcEEEeC
Confidence            122333333322211  2457889999999988  4456788888  99999999999998899999874

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.98  E-value=8.4e-30  Score=236.92  Aligned_cols=299  Identities=24%  Similarity=0.312  Sum_probs=230.2

Q ss_pred             eeEEEec---CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccc
Q 017426           19 MAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (372)
Q Consensus        19 ~~~~~~~---~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (372)
                      |++++..   +..+++.+.+.|.|.++||+|++.++++|+.|+..+.|.....  ..+|.++|+|++|+|+++|+++++|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~vG~~v~~~   79 (331)
T cd08273           2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQ--PPLPFTPGYDLVGRVDALGSGVTGF   79 (331)
T ss_pred             eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCC--CCCCcccccceEEEEEEeCCCCccC
Confidence            5666663   3578889999999999999999999999999999887653211  2467899999999999999999999


Q ss_pred             cccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-h
Q 017426           96 VPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-P  174 (372)
Q Consensus        96 ~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~  174 (372)
                      ++        ||+|+...                            ..|+|++|+.++.+.++++|+++++.+++.+. .
T Consensus        80 ~~--------Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~  123 (331)
T cd08273          80 EV--------GDRVAALT----------------------------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLN  123 (331)
T ss_pred             CC--------CCEEEEeC----------------------------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhH
Confidence            99        88887521                            24899999999999999999999998888665 7


Q ss_pred             hHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHH
Q 017426          175 LSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV  252 (372)
Q Consensus       175 ~~~a~~~l~~-~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~  252 (372)
                      +.+||+++.. +.+++|++++|+|+ |.+|++++++++..|++ ++++.. +++.++++++|+..+ +.  ...++... 
T Consensus       124 ~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~-v~~~~~-~~~~~~~~~~g~~~~-~~--~~~~~~~~-  197 (331)
T cd08273         124 YVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAE-VYGTAS-ERNHAALRELGATPI-DY--RTKDWLPA-  197 (331)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCE-EEEEeC-HHHHHHHHHcCCeEE-cC--CCcchhhh-
Confidence            7889998854 78999999999997 99999999999999994 677766 888888899996542 32  22333332 


Q ss_pred             HHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccc--cc--------------hhhhccCcEEEee
Q 017426          253 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTV--PL--------------TPAAVREVDVVGV  316 (372)
Q Consensus       253 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~--~~--------------~~~~~~~~~i~~~  316 (372)
                       ..   .++++|++||++++. ....++++++++|+++.++........  ..              .....+.......
T Consensus       198 -~~---~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (331)
T cd08273         198 -ML---TPGGVDVVFDGVGGE-SYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYV  272 (331)
T ss_pred             -hc---cCCCceEEEECCchH-HHHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEee
Confidence             12   246899999999986 588999999999999999854432111  10              0011122222222


Q ss_pred             ccC--------CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEE
Q 017426          317 FRY--------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  370 (372)
Q Consensus       317 ~~~--------~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv  370 (372)
                      ...        .+.+++++++++++.+  .+.+.++|++  ++++++++.+.++...+|+|+
T Consensus       273 ~~~~~~~p~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         273 WRDRAEDPKLFRQDLTELLDLLAKGKI--RPKIAKRLPL--SEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             chhcccCHHHHHHHHHHHHHHHHCCCc--cCCcceEEcH--HHHHHHHHHHHcCCCcceEEe
Confidence            111        3567889999999988  4456778888  999999999998888888885

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08251 polyketide_synthase polyketide synthase

Probab=99.98  E-value=2.7e-30  Score=236.75  Aligned_cols=289  Identities=25%  Similarity=0.388  Sum_probs=227.0

Q ss_pred             CCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccccccccCCCCCEEEEcCCc
Q 017426           36 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGI  115 (372)
Q Consensus        36 ~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~  115 (372)
                      .|.+.+++++|++.++++|+.|+..+.+....  ...+|.++|+|++|+|+++|+++++|++        ||+|+.... 
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~--------Gd~V~~~~~-   70 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPT--MPPYPFTPGFEASGVVRAVGPHVTRLAV--------GDEVIAGTG-   70 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCC--CCCCCCCcCceeeEEEEEECCCCCCCCC--------CCEEEEecC-
Confidence            57789999999999999999999988765421  1356889999999999999999999999        888876311 


Q ss_pred             CCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-hhHHHHHHHHhcCCCCCCEEE
Q 017426          116 SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACRRANIGPETNVL  194 (372)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vl  194 (372)
                                               ..+|+|++|+.++++.++++|+++++.+++.++ .+.+||++++...+++|++++
T Consensus        71 -------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vl  125 (303)
T cd08251          71 -------------------------ESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHIL  125 (303)
T ss_pred             -------------------------CCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEE
Confidence                                     135999999999999999999999999888776 678899999888899999999


Q ss_pred             EECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcH
Q 017426          195 IMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN  273 (372)
Q Consensus       195 I~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  273 (372)
                      |+|+ +.+|++++|+++.+|+ .++++.+++++.+.++++|++.+++..  ..++.+.+.++.  .+.++|+++|++++ 
T Consensus       126 i~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~--~~~~~d~v~~~~~~-  199 (303)
T cd08251         126 IQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYV--EEDFEEEIMRLT--GGRGVDVVINTLSG-  199 (303)
T ss_pred             EecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCC--CccHHHHHHHHc--CCCCceEEEECCcH-
Confidence            9976 9999999999999999 578888888899999999998877643  346666666553  35689999999986 


Q ss_pred             HHHHHHHHHhccCCEEEEEcCCCCC--ccccchhh----hccCcEEEeeccC-----CCcHHHHHHHHHcCCCCCCCceE
Q 017426          274 KTMSTALGATCAGGKVCLVGMGHHE--MTVPLTPA----AVREVDVVGVFRY-----KNTWPLCLELLRSGKIDVKPLVT  342 (372)
Q Consensus       274 ~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~----~~~~~~i~~~~~~-----~~~~~~~~~ll~~g~~~~~~~~~  342 (372)
                      ......+++++++|+++.++.....  .......+    .++.+.+......     .+.+.+++++++++.+  .+..+
T Consensus       200 ~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~  277 (303)
T cd08251         200 EAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGEL--RPTVS  277 (303)
T ss_pred             HHHHHHHHHhccCcEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCc--cCCCc
Confidence            5788899999999999998754321  11221111    1122222221111     2457788899999988  44567


Q ss_pred             EEecCChHHHHHHHHHHhcCCCceEEEE
Q 017426          343 HRFGFSQKEVEEAFETSARGGTAIKVMF  370 (372)
Q Consensus       343 ~~~~~~~~~~~~A~~~~~~~~~~gkvvv  370 (372)
                      +.|++  ++++++++.+.++...+|+++
T Consensus       278 ~~~~~--~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         278 RIFPF--DDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             eEEcH--HHHHHHHHHHHhCCCcceEeC
Confidence            88888  999999999998888888874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.98  E-value=1.7e-29  Score=232.94  Aligned_cols=295  Identities=26%  Similarity=0.338  Sum_probs=232.6

Q ss_pred             CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccccccccCCCC
Q 017426           27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPG  106 (372)
Q Consensus        27 ~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~gd~v~~~~G  106 (372)
                      ..+.+.+.+.+.+.++|++|+|.++++|+.|+....+...    ..+|.++|+|++|+|+.+|+++++|++        |
T Consensus        12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~----~~~~~~~g~e~~G~v~~~g~~~~~~~~--------G   79 (320)
T cd05286          12 EVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYP----LPLPFVLGVEGAGVVEAVGPGVTGFKV--------G   79 (320)
T ss_pred             cceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCC----CCCCccCCcceeEEEEEECCCCCCCCC--------C
Confidence            3566777777778999999999999999999988776432    245778999999999999999999999        8


Q ss_pred             CEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-hhHHHHHHHH-h
Q 017426          107 DRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-R  184 (372)
Q Consensus       107 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~-~  184 (372)
                      |+|++..                            ..|+|++|+.++++.++++|+++++.+++.+. ...++++++. .
T Consensus        80 ~~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~  131 (320)
T cd05286          80 DRVAYAG----------------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRET  131 (320)
T ss_pred             CEEEEec----------------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHh
Confidence            8877520                            15899999999999999999999998888665 6678888874 5


Q ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcc
Q 017426          185 ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       185 ~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      +++++|+++||+|+ |.+|++++++++.+|+. ++++..++++.++++++|++.++...  ..++.+.+..+.  .+.++
T Consensus       132 ~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~~~~~  206 (320)
T cd05286         132 YPVKPGDTVLVHAAAGGVGLLLTQWAKALGAT-VIGTVSSEEKAELARAAGADHVINYR--DEDFVERVREIT--GGRGV  206 (320)
T ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHCCCCEEEeCC--chhHHHHHHHHc--CCCCe
Confidence            88999999999996 99999999999999994 77777888999999999998776532  345666665543  25679


Q ss_pred             eEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-ccccchhhhccCcEEEeecc----C-----CCcHHHHHHHHHcC
Q 017426          264 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFR----Y-----KNTWPLCLELLRSG  333 (372)
Q Consensus       264 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~----~-----~~~~~~~~~ll~~g  333 (372)
                      |++||++++ .....++++++++|+++.++..... ..+....+..+++++.+...    .     .+.+.++++++.++
T Consensus       207 d~vl~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (320)
T cd05286         207 DVVYDGVGK-DTFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASG  285 (320)
T ss_pred             eEEEECCCc-HhHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCC
Confidence            999999997 4788999999999999999864432 12222223355666554321    1     23456788899998


Q ss_pred             CCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          334 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      .+.  +...+.|++  +++++|++.+..+...+|++++
T Consensus       286 ~l~--~~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~  319 (320)
T cd05286         286 KLK--VEIGKRYPL--ADAAQAHRDLESRKTTGKLLLI  319 (320)
T ss_pred             CCc--CcccceEcH--HHHHHHHHHHHcCCCCceEEEe
Confidence            874  346677888  9999999999998888899875

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.97  E-value=5.5e-29  Score=230.30  Aligned_cols=307  Identities=23%  Similarity=0.328  Sum_probs=239.5

Q ss_pred             ceeEEEec---CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        18 ~~~~~~~~---~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      |+++.+..   +..+.+.+.+.|.+++++++|+|.++++|+.|+....+.....  ..+|.++|+|++|+|+.+|+++.+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~vg~~~~~   78 (325)
T TIGR02824         1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPP--PGASDILGLEVAGEVVAVGEGVSR   78 (325)
T ss_pred             CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC--CCCCCCccceeEEEEEEeCCCCCC
Confidence            45666554   3456677777777899999999999999999988876533211  234688999999999999999999


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-  173 (372)
                      |++        ||+|+..                            ..+|+|++|+.++.++++++|+++++.+++.+. 
T Consensus        79 ~~~--------Gd~V~~~----------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~  122 (325)
T TIGR02824        79 WKV--------GDRVCAL----------------------------VAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPE  122 (325)
T ss_pred             CCC--------CCEEEEc----------------------------cCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhH
Confidence            999        8888752                            124899999999999999999999988887665 


Q ss_pred             hhHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHH
Q 017426          174 PLSVGVHAC-RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE  251 (372)
Q Consensus       174 ~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~  251 (372)
                      .+.++|+++ +.+.++++++++|+|+ |.+|++++++++..|++ ++++.+++++.+.++++|++.+++.  ...++.+.
T Consensus       123 ~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~  199 (325)
T TIGR02824       123 TFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGAR-VFTTAGSDEKCAACEALGADIAINY--REEDFVEV  199 (325)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCcEEEec--CchhHHHH
Confidence            777899886 5588999999999997 99999999999999994 7777788888888888998766543  23455555


Q ss_pred             HHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC-CccccchhhhccCcEEEeeccCC----------
Q 017426          252 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRYK----------  320 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~----------  320 (372)
                      ++...  .+.++|++++++|+. ....++++++++|+++.++.... ...+....+..+++++.+.....          
T Consensus       200 ~~~~~--~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (325)
T TIGR02824       200 VKAET--GGKGVDVILDIVGGS-YLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIA  276 (325)
T ss_pred             HHHHc--CCCCeEEEEECCchH-HHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHH
Confidence            65543  245799999999974 78889999999999999985432 12334444457888888765321          


Q ss_pred             -CcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          321 -NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       321 -~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                       +.+.+++++++++.+  .+..++.|++  ++++++++.+..+...+|+++++
T Consensus       277 ~~~~~~~~~~~~~~~l--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~  325 (325)
T TIGR02824       277 AELREHVWPLLASGRV--RPVIDKVFPL--EDAAQAHALMESGDHIGKIVLTV  325 (325)
T ss_pred             HHHHHHHHHHHHCCcc--cCccccEEeH--HHHHHHHHHHHhCCCcceEEEeC
Confidence             234567888888887  4456777888  99999999999888889999874

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=1.1e-28  Score=228.67  Aligned_cols=311  Identities=27%  Similarity=0.397  Sum_probs=238.4

Q ss_pred             ceeEEEecC---CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        18 ~~~~~~~~~---~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      ||++++...   ..+.+.+.+.|.+.+++++|+|.++++|+.|+....+.....  ..+|.++|+|++|+|+.+|+++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~~~~   78 (328)
T cd08268           1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP--PPLPARLGYEAAGVVEAVGAGVTG   78 (328)
T ss_pred             CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC--CCCCCCCCcceEEEEEeeCCCCCc
Confidence            467777643   467777888888899999999999999999998876643221  244778999999999999999999


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-  173 (372)
                      |++        ||+|+..+...                       ....|+|++|+.++.+.++++|+++++.+++.+. 
T Consensus        79 ~~~--------Gd~V~~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  127 (328)
T cd08268          79 FAV--------GDRVSVIPAAD-----------------------LGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWM  127 (328)
T ss_pred             CCC--------CCEEEeccccc-----------------------cCCCccceEEEEechHhcEeCCCCCCHHHHHHhhh
Confidence            999        88777532110                       1235899999999999999999999988887665 


Q ss_pred             hhHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHH
Q 017426          174 PLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE  251 (372)
Q Consensus       174 ~~~~a~~~l~-~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~  251 (372)
                      .+.++|.++. ...+.++++++|+|+ |.+|++++++++..|++ ++.+..++++.+.++++|.+.+++.+  ..++...
T Consensus       128 ~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~  204 (328)
T cd08268         128 QYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGAT-VIATTRTSEKRDALLALGAAHVIVTD--EEDLVAE  204 (328)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHcCCCEEEecC--CccHHHH
Confidence            7788999885 578899999999997 99999999999999994 77777888888888889987766543  2455555


Q ss_pred             HHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-ccccchhhhccCcEEEeeccC---------CC
Q 017426          252 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY---------KN  321 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~---------~~  321 (372)
                      +....  .+.++|++|++.++ .....++++++++|+++.++..... ..++......++..+.+....         .+
T Consensus       205 ~~~~~--~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (328)
T cd08268         205 VLRIT--GGKGVDVVFDPVGG-PQFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRR  281 (328)
T ss_pred             HHHHh--CCCCceEEEECCch-HhHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHH
Confidence            55443  24579999999998 4778899999999999999754321 122223245566666654321         22


Q ss_pred             cHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          322 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       322 ~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      .++.+.+++.++.+  .+..++.|++  +++.++++.+.++...+|++++
T Consensus       282 ~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vv~~  327 (328)
T cd08268         282 AIAFILDGLASGAL--KPVVDRVFPF--DDIVEAHRYLESGQQIGKIVVT  327 (328)
T ss_pred             HHHHHHHHHHCCCC--cCCcccEEcH--HHHHHHHHHHHcCCCCceEEEe
Confidence            34556666777777  3446677888  9999999999988888899886

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.97  E-value=4.2e-29  Score=229.40  Aligned_cols=301  Identities=27%  Similarity=0.362  Sum_probs=230.1

Q ss_pred             ceeEEEecCC---ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        18 ~~~~~~~~~~---~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      |+++++..++   .+.+.+.+.|.++++||+|+|.++++|+.|+....|.........+|..+|+|++|+|+.+|+++.+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~   80 (309)
T cd05289           1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG   80 (309)
T ss_pred             CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence            5677776544   3566777778889999999999999999999888764321112345888999999999999999999


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-  173 (372)
                      +++        ||+|+..+..                         ...|+|++|+.++.+.++++|+++++..++.+. 
T Consensus        81 ~~~--------G~~V~~~~~~-------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  127 (309)
T cd05289          81 FKV--------GDEVFGMTPF-------------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPL  127 (309)
T ss_pred             CCC--------CCEEEEccCC-------------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhH
Confidence            999        8888753210                         125899999999999999999999988888765 


Q ss_pred             hhHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHH
Q 017426          174 PLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE  251 (372)
Q Consensus       174 ~~~~a~~~l~~-~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~  251 (372)
                      .+.+++++++. ..+.+|++++|+|+ |.+|++++++++..|++ ++++..++ +.++++++|++.++....  .++.+ 
T Consensus       128 ~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~-v~~~~~~~-~~~~~~~~g~~~~~~~~~--~~~~~-  202 (309)
T cd05289         128 AGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGAR-VIATASAA-NADFLRSLGADEVIDYTK--GDFER-  202 (309)
T ss_pred             HHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecch-hHHHHHHcCCCEEEeCCC--Cchhh-
Confidence            56788888865 55899999999997 99999999999999995 56665666 788888899877665332  23322 


Q ss_pred             HHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC--CCcHHHHHHH
Q 017426          252 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--KNTWPLCLEL  329 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~l  329 (372)
                           ...+.++|++||++++. ....++++++++|+++.++.......    ....++.++......  .+.+.+++++
T Consensus       203 -----~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (309)
T cd05289         203 -----AAAPGGVDAVLDTVGGE-TLARSLALVKPGGRLVSIAGPPPAEQ----AAKRRGVRAGFVFVEPDGEQLAELAEL  272 (309)
T ss_pred             -----ccCCCCceEEEECCchH-HHHHHHHHHhcCcEEEEEcCCCcchh----hhhhccceEEEEEecccHHHHHHHHHH
Confidence                 12356799999999986 78899999999999999985433211    222233333333211  4578889999


Q ss_pred             HHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEE
Q 017426          330 LRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  370 (372)
Q Consensus       330 l~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv  370 (372)
                      ++++.+  .+.+++.|++  ++++++++.+..+...+|+++
T Consensus       273 ~~~~~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~  309 (309)
T cd05289         273 VEAGKL--RPVVDRVFPL--EDAAEAHERLESGHARGKVVL  309 (309)
T ss_pred             HHCCCE--EEeeccEEcH--HHHHHHHHHHHhCCCCCcEeC
Confidence            999987  4557788888  999999999988877778764

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.97  E-value=2.5e-28  Score=225.61  Aligned_cols=305  Identities=30%  Similarity=0.488  Sum_probs=239.0

Q ss_pred             ceeEEEec---CCceeEEEecCCCCC-CCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCc
Q 017426           18 NMAAWLLG---VNTLKIQPFELPSLG-PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (372)
Q Consensus        18 ~~~~~~~~---~~~l~~~~~~~p~~~-~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (372)
                      |+++++..   +..+.+.+.+ |.+. +++++|++.++++|+.|+....|....  ....|.++|+|++|+|+.+|+++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~   77 (323)
T cd08241           1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQV--KPPLPFVPGSEVAGVVEAVGEGVT   77 (323)
T ss_pred             CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCC--CCCCCCcccceeEEEEEEeCCCCC
Confidence            57777762   3567777777 7665 599999999999999999887764321  123466899999999999999999


Q ss_pred             cccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc
Q 017426           94 TLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE  173 (372)
Q Consensus        94 ~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~  173 (372)
                      ++++        ||+|+..+                            ..|++++|+.++.+.++++|+++++.+++.+.
T Consensus        78 ~~~~--------G~~V~~~~----------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~  121 (323)
T cd08241          78 GFKV--------GDRVVALT----------------------------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALP  121 (323)
T ss_pred             CCCC--------CCEEEEec----------------------------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhh
Confidence            9999        88887621                            25899999999999999999999988887554


Q ss_pred             -hhHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHH
Q 017426          174 -PLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE  250 (372)
Q Consensus       174 -~~~~a~~~l~-~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~  250 (372)
                       .+.+|+.++. ...++++++++|+|+ |.+|++++++++..|++ +++++.++++.+.++++|+...+...  ..++.+
T Consensus       122 ~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~  198 (323)
T cd08241         122 VTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGAR-VIAAASSEEKLALARALGADHVIDYR--DPDLRE  198 (323)
T ss_pred             hHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCE-EEEEeCCHHHHHHHHHcCCceeeecC--CccHHH
Confidence             7788998875 578999999999998 99999999999999995 77787888899999999987766532  345666


Q ss_pred             HHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCcc-ccchhhhccCcEEEeeccC----------
Q 017426          251 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT-VPLTPAAVREVDVVGVFRY----------  319 (372)
Q Consensus       251 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~----------  319 (372)
                      .+....  .+.++|+++|++|+ ..+..++++++++|+++.++....... +.......++.++.+....          
T Consensus       199 ~i~~~~--~~~~~d~v~~~~g~-~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (323)
T cd08241         199 RVKALT--GGRGVDVVYDPVGG-DVFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELL  275 (323)
T ss_pred             HHHHHc--CCCCcEEEEECccH-HHHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHH
Confidence            666553  34679999999997 578889999999999999986433222 2222345567777765432          


Q ss_pred             CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          320 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       320 ~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      .+.++++++++.++.+  .+..++.|++  +++.++++.+..+...+|++++
T Consensus       276 ~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vvv~  323 (323)
T cd08241         276 RANLAELFDLLAEGKI--RPHVSAVFPL--EQAAEALRALADRKATGKVVLT  323 (323)
T ss_pred             HHHHHHHHHHHHCCCc--ccccceEEcH--HHHHHHHHHHHhCCCCCcEEeC
Confidence            2456789999999987  4557788888  9999999998888788888864

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=4.3e-28  Score=225.73  Aligned_cols=296  Identities=29%  Similarity=0.368  Sum_probs=230.1

Q ss_pred             CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccccccccCCCC
Q 017426           27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPG  106 (372)
Q Consensus        27 ~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~gd~v~~~~G  106 (372)
                      ..+.+.+.+.|.|.++||+|++.++++|+.|+....|....  ....|.++|+|++|+|+.+|+++++|++        |
T Consensus        12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~~~~--------G   81 (337)
T cd08275          12 DKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDS--APKPPFVPGFECAGTVEAVGEGVKDFKV--------G   81 (337)
T ss_pred             cceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC--CCCCCCCCcceeEEEEEEECCCCcCCCC--------C
Confidence            36777788888889999999999999999999887764321  1244778999999999999999999999        8


Q ss_pred             CEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-hhHHHHHHHH-h
Q 017426          107 DRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-R  184 (372)
Q Consensus       107 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~-~  184 (372)
                      |+|+..                            ..+|+|++|+.++.+.++++|+++++.+++.+. ++.++|+++. .
T Consensus        82 ~~V~~~----------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~  133 (337)
T cd08275          82 DRVMGL----------------------------TRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFEL  133 (337)
T ss_pred             CEEEEe----------------------------cCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHh
Confidence            888752                            124899999999999999999999998888766 7788999874 5


Q ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCc
Q 017426          185 ANIGPETNVLIMGA-GPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       185 ~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~  262 (372)
                      +++++|++|+|+|+ |.+|++++++|+.. ++  +++...++++.++++.+|++.+++.  ...++.+.++.+.   +++
T Consensus       134 ~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~---~~~  206 (337)
T cd08275         134 GNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV--TVVGTASASKHEALKENGVTHVIDY--RTQDYVEEVKKIS---PEG  206 (337)
T ss_pred             hCCCCCCEEEEEcCcchHHHHHHHHHHHccCc--EEEEeCCHHHHHHHHHcCCcEEeeC--CCCcHHHHHHHHh---CCC
Confidence            88999999999998 99999999999998 33  2222234567888888998776653  3356666666654   468


Q ss_pred             ceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCc--ccc---------------chhhhccCcEEEeeccC------
Q 017426          263 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM--TVP---------------LTPAAVREVDVVGVFRY------  319 (372)
Q Consensus       263 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~---------------~~~~~~~~~~i~~~~~~------  319 (372)
                      +|++||++|+. ....++++++++|+++.+|......  ...               ...+..++.++.++...      
T Consensus       207 ~d~v~~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (337)
T cd08275         207 VDIVLDALGGE-DTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEER  285 (337)
T ss_pred             ceEEEECCcHH-HHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhCh
Confidence            99999999975 7788999999999999997543210  110               12335566666665321      


Q ss_pred             ---CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          320 ---KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       320 ---~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                         ...+.++++++.++.+  .+..++.|++  ++++++++.+.++...+|+++++
T Consensus       286 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         286 ELLTEVMDKLLKLYEEGKI--KPKIDSVFPF--EEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             HHHHHHHHHHHHHHHCCCC--CCceeeEEcH--HHHHHHHHHHHcCCCcceEEEeC
Confidence               1246778888989987  4556788888  99999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=7.3e-29  Score=229.15  Aligned_cols=295  Identities=27%  Similarity=0.322  Sum_probs=220.4

Q ss_pred             eEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccccccccCCCCCEE
Q 017426           30 KIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRV  109 (372)
Q Consensus        30 ~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~gd~v~~~~Gd~V  109 (372)
                      .+.+.|.|.+.++||+|++.++++|+.|+....|..........|..+|+|++|+|+++|+++.++++        ||+|
T Consensus        15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~--------Gd~V   86 (319)
T cd08267          15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKV--------GDEV   86 (319)
T ss_pred             ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCC--------CCEE
Confidence            77788899999999999999999999999988764321111234678999999999999999999999        8888


Q ss_pred             EEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-hhHHHHHHHHh-cCC
Q 017426          110 ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACRR-ANI  187 (372)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~-~~~  187 (372)
                      +.....                         ...|+|++|+.++.+.++++|+++++.+++.+. .+.+||++++. .++
T Consensus        87 ~~~~~~-------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~  141 (319)
T cd08267          87 FGRLPP-------------------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKV  141 (319)
T ss_pred             EEeccC-------------------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCC
Confidence            763210                         135899999999999999999999998888765 67889999865 568


Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          188 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       188 ~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      ++|++++|+|+ |.+|++++++++.+|++ ++++.++ ++.+.++++|++.+++...  .++.   ...  ..+.++|++
T Consensus       142 ~~g~~vli~g~~g~~g~~~~~la~~~g~~-v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~---~~~--~~~~~~d~v  212 (319)
T cd08267         142 KPGQRVLINGASGGVGTFAVQIAKALGAH-VTGVCST-RNAELVRSLGADEVIDYTT--EDFV---ALT--AGGEKYDVI  212 (319)
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCE-EEEEeCH-HHHHHHHHcCCCEeecCCC--CCcc---hhc--cCCCCCcEE
Confidence            99999999997 99999999999999995 6666554 7788889999877665432  2332   111  235679999


Q ss_pred             EeCCCcH-HHHHHHHHHhccCCEEEEEcCCCCCccccc-----h-hhhccCcEEEeeccCCCcHHHHHHHHHcCCCCCCC
Q 017426          267 FDCAGLN-KTMSTALGATCAGGKVCLVGMGHHEMTVPL-----T-PAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKP  339 (372)
Q Consensus       267 id~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-----~-~~~~~~~~i~~~~~~~~~~~~~~~ll~~g~~~~~~  339 (372)
                      ++|+++. ......+..++++|+++.++..........     . ....+.+.........+.+.+++++++++.+  .+
T Consensus       213 i~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~  290 (319)
T cd08267         213 FDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKL--KP  290 (319)
T ss_pred             EECCCchHHHHHHhhhccCCCCEEEEeccccccccccccccchhhccccceEEEEEecCCHHHHHHHHHHHHCCCe--ee
Confidence            9999852 233344444999999999986443211111     1 1111222222211115678899999999988  45


Q ss_pred             ceEEEecCChHHHHHHHHHHhcCCCceEEEE
Q 017426          340 LVTHRFGFSQKEVEEAFETSARGGTAIKVMF  370 (372)
Q Consensus       340 ~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv  370 (372)
                      .++++|++  +++++|++.+.++...+|+++
T Consensus       291 ~~~~~~~~--~~i~~a~~~~~~~~~~~~vvv  319 (319)
T cd08267         291 VIDSVYPL--EDAPEAYRRLKSGRARGKVVI  319 (319)
T ss_pred             eeeeEEcH--HHHHHHHHHHhcCCCCCcEeC
Confidence            57788888  999999999998877788774

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.96  E-value=6.3e-28  Score=219.38  Aligned_cols=276  Identities=26%  Similarity=0.328  Sum_probs=216.4

Q ss_pred             CcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccccccccCCCCCEEEEcCCcCCCCCc
Q 017426           42 YDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCD  121 (372)
Q Consensus        42 ~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~  121 (372)
                      +||+||+.++++|+.|+....|..     ..+|.++|+|++|+|+++|++++.|++        ||+|+..         
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~-----~~~~~~~g~e~~G~v~~~g~~~~~~~~--------Gd~V~~~---------   58 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL-----PGDETPLGLECSGIVTRVGSGVTGLKV--------GDRVMGL---------   58 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC-----CCCCCccceeeeEEEEeecCCccCCCC--------CCEEEEE---------
Confidence            589999999999999999887642     245789999999999999999999999        8888752         


Q ss_pred             cccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-hhHHHHHHHH-hcCCCCCCEEEEECC-
Q 017426          122 HCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGA-  198 (372)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~Ga-  198 (372)
                                          ..|+|+||+.++.+.++++|+++++.+++.+. ...++|.++. ...+++|++++|+|+ 
T Consensus        59 --------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~  118 (293)
T cd05195          59 --------------------APGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAA  118 (293)
T ss_pred             --------------------ecCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCC
Confidence                                24899999999999999999999998888775 6778988874 488999999999976 


Q ss_pred             CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC--CCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHH
Q 017426          199 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG--ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTM  276 (372)
Q Consensus       199 g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~  276 (372)
                      |.+|++++|+++.+|+ .++++..++++.+.++.++  ++.+++.  ...++.+.++++.  .+.++|++||++|+. .+
T Consensus       119 g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~d~vi~~~~~~-~~  192 (293)
T cd05195         119 GGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSS--RDLSFADGILRAT--GGRGVDVVLNSLSGE-LL  192 (293)
T ss_pred             CHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeec--CchhHHHHHHHHh--CCCCceEEEeCCCch-HH
Confidence            9999999999999999 5777878888888888888  5666553  3345666666553  356899999999986 88


Q ss_pred             HHHHHHhccCCEEEEEcCCCCC--ccccchhhhccCcEEEeecc-----C-----CCcHHHHHHHHHcCCCCCCCceEEE
Q 017426          277 STALGATCAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGVFR-----Y-----KNTWPLCLELLRSGKIDVKPLVTHR  344 (372)
Q Consensus       277 ~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~-----~-----~~~~~~~~~ll~~g~~~~~~~~~~~  344 (372)
                      ..+++.++++|+++.++.....  ....... ..+...+.....     .     .+.+.+++++++++.+  .+...+.
T Consensus       193 ~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  269 (293)
T cd05195         193 RASWRCLAPFGRFVEIGKRDILSNSKLGMRP-FLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVL--KPLPPTV  269 (293)
T ss_pred             HHHHHhcccCceEEEeeccccccCCccchhh-hccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCc--ccCCCee
Confidence            9999999999999999854422  1122111 223333333211     0     2356788899999987  4556677


Q ss_pred             ecCChHHHHHHHHHHhcCCCceEEEE
Q 017426          345 FGFSQKEVEEAFETSARGGTAIKVMF  370 (372)
Q Consensus       345 ~~~~~~~~~~A~~~~~~~~~~gkvvv  370 (372)
                      +.+  ++++++++.+.++...+|+++
T Consensus       270 ~~~--~~~~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         270 VPS--ASEIDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             ech--hhHHHHHHHHhcCCCCceecC
Confidence            778  999999999998877788764

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>smart00829 PKS_ER Enoylreductase

Probab=99.96  E-value=1.3e-26  Score=210.53  Aligned_cols=271  Identities=28%  Similarity=0.397  Sum_probs=211.6

Q ss_pred             EEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccccccccCCCCCEEEEcCCcCCCCCccccC
Q 017426           46 VRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKG  125 (372)
Q Consensus        46 V~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~  125 (372)
                      ||+.++++|+.|+....|.+      ..|.++|+|++|+|+++|++++.|++        ||+|+..             
T Consensus         2 i~v~~~~i~~~d~~~~~g~~------~~~~~~g~e~~G~v~~~G~~~~~~~~--------Gd~V~~~-------------   54 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLL------PGEAVLGGECAGVVTRVGPGVTGLAV--------GDRVMGL-------------   54 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCC------CCCCCCCceeEEEEEeeCCCCcCCCC--------CCEEEEE-------------
Confidence            89999999999999887642      23678999999999999999999999        8888752             


Q ss_pred             CCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECC-CHHH
Q 017426          126 GRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGA-GPIG  202 (372)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~~G  202 (372)
                                      ..|+|++|+.++.++++++|+++++.+++.+. .+.++|.++ +...+++|++|+|+|+ |.+|
T Consensus        55 ----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g  118 (288)
T smart00829       55 ----------------APGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVG  118 (288)
T ss_pred             ----------------cCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHH
Confidence                            24899999999999999999999999998876 667888887 5588999999999986 9999


Q ss_pred             HHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC--CeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHH
Q 017426          203 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA--DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTAL  280 (372)
Q Consensus       203 ~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~  280 (372)
                      ++++++++..|+ .++++.+++++.+.++++|+  +.++++  ...++.+.+.+..  .+.++|++||++++ ......+
T Consensus       119 ~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~--~~~~~d~vi~~~~~-~~~~~~~  192 (288)
T smart00829      119 QAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSS--RDLSFADEILRAT--GGRGVDVVLNSLAG-EFLDASL  192 (288)
T ss_pred             HHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeC--CCccHHHHHHHHh--CCCCcEEEEeCCCH-HHHHHHH
Confidence            999999999999 57888888999999999998  566553  2345666665543  24579999999996 5788899


Q ss_pred             HHhccCCEEEEEcCCCCC--ccccchhhhccCcEEEeecc---------CCCcHHHHHHHHHcCCCCCCCceEEEecCCh
Q 017426          281 GATCAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGVFR---------YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQ  349 (372)
Q Consensus       281 ~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~---------~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~  349 (372)
                      ++++++|+++.++.....  ...+... ..+...+.+...         ..+.+.+++++++++.+.  +...+.|++  
T Consensus       193 ~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--  267 (288)
T smart00829      193 RCLAPGGRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLR--PLPVTVFPI--  267 (288)
T ss_pred             HhccCCcEEEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCcc--CcCceEEcH--
Confidence            999999999999854311  1122122 233344333221         123467788889888874  335577888  


Q ss_pred             HHHHHHHHHHhcCCCceEEEE
Q 017426          350 KEVEEAFETSARGGTAIKVMF  370 (372)
Q Consensus       350 ~~~~~A~~~~~~~~~~gkvvv  370 (372)
                      ++++++++.+..+...+|+++
T Consensus       268 ~~~~~~~~~~~~~~~~~~ivv  288 (288)
T smart00829      268 SDVEDAFRYMQQGKHIGKVVL  288 (288)
T ss_pred             HHHHHHHHHHhcCCCcceEeC
Confidence            999999999998877778764

Enoylreductase in Polyketide synthases.

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.96  E-value=9.6e-27  Score=211.01  Aligned_cols=245  Identities=29%  Similarity=0.416  Sum_probs=193.5

Q ss_pred             cCCCcccccceeEEEEEecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEE
Q 017426           71 VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQV  150 (372)
Q Consensus        71 ~~~p~~~G~e~~G~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~  150 (372)
                      ..+|.++|+|++|+|+++|+++++|++        ||+|+.                               .+.|++|+
T Consensus        18 ~~~p~v~g~e~~G~V~~vG~~v~~~~~--------Gd~V~~-------------------------------~~~~~~~~   58 (277)
T cd08255          18 LPLPLPPGYSSVGRVVEVGSGVTGFKP--------GDRVFC-------------------------------FGPHAERV   58 (277)
T ss_pred             CcCCcccCcceeEEEEEeCCCCCCCCC--------CCEEEe-------------------------------cCCcceEE
Confidence            467899999999999999999999999        888875                               24689999


Q ss_pred             EecCCceEECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHH
Q 017426          151 VHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA  230 (372)
Q Consensus       151 ~v~~~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~  230 (372)
                      .++.++++++|+++++.+++.+..+.+||++++.+++++|+++||+|+|.+|++++++|+.+|++.++++++++++.+++
T Consensus        59 ~v~~~~~~~ip~~l~~~~aa~~~~~~ta~~~~~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~  138 (277)
T cd08255          59 VVPANLLVPLPDGLPPERAALTALAATALNGVRDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELA  138 (277)
T ss_pred             EcCHHHeeECcCCCCHHHhHHHHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHH
Confidence            99999999999999988888777778899998888899999999998899999999999999996588888899999999


Q ss_pred             HHhC-CCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhcc
Q 017426          231 KEIG-ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVR  309 (372)
Q Consensus       231 ~~lg-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~  309 (372)
                      +++| ++.++....          ..  ..+.++|++||+++........+++++++|+++.+|............+..+
T Consensus       139 ~~~g~~~~~~~~~~----------~~--~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~  206 (277)
T cd08255         139 EALGPADPVAADTA----------DE--IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFK  206 (277)
T ss_pred             HHcCCCccccccch----------hh--hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhc
Confidence            9999 444432111          01  1256899999998877788899999999999999986443311111223334


Q ss_pred             CcEEEeeccC-------------CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcC-CCceEEEE
Q 017426          310 EVDVVGVFRY-------------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMF  370 (372)
Q Consensus       310 ~~~i~~~~~~-------------~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~-~~~gkvvv  370 (372)
                      ..++.+....             .+.+++++++++++.+  .+.+.++|++  +++++|++.+.++ ....|+++
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~~k~~~  277 (277)
T cd08255         207 RLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRL--EALITHRVPF--EDAPEAYRLLFEDPPECLKVVL  277 (277)
T ss_pred             cCeEEeecccccccccccccccccccHHHHHHHHHcCCc--cccccCccCH--HHHHHHHHHHHcCCccceeeeC
Confidence            4454443321             2568999999999987  4456677888  9999999998877 55677764

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.94  E-value=3.7e-26  Score=224.13  Aligned_cols=292  Identities=20%  Similarity=0.250  Sum_probs=230.0

Q ss_pred             CceeEEEecCC---CCCCCcEEEEEeeeeeCcccHHhhhhcccCCcc----cCCCcccccceeEEEEEecCCCccccccc
Q 017426           27 NTLKIQPFELP---SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV----VKEPMVIGHECAGVIEKVGSEVKTLVPGD   99 (372)
Q Consensus        27 ~~l~~~~~~~p---~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~----~~~p~~~G~e~~G~V~~vG~~v~~~~~gd   99 (372)
                      ..+++.+-|..   +..++.=+--|.|+++|..|+-...|+.+.+..    ....+++|.||+||-..            
T Consensus      1427 sSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd~~------------ 1494 (2376)
T KOG1202|consen 1427 SSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRDAS------------ 1494 (2376)
T ss_pred             cceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccccCC------------
Confidence            56777777755   236777789999999999999999987654322    23467899999998543            


Q ss_pred             cccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-hhHHH
Q 017426          100 RVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVG  178 (372)
Q Consensus       100 ~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~~a  178 (372)
                            |.||++-                            ...-++++-+.++.+++|.+|+++.+++|++.+ .++|+
T Consensus      1495 ------GrRvM~m----------------------------vpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTa 1540 (2376)
T KOG1202|consen 1495 ------GRRVMGM----------------------------VPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTA 1540 (2376)
T ss_pred             ------CcEEEEe----------------------------eehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeee
Confidence                  8888752                            234678889999999999999999999999999 67899


Q ss_pred             HHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh-C---CCeEEecCCCcccHHHHH
Q 017426          179 VHAC-RRANIGPETNVLIMG-AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-G---ADNIVKVSTNLQDIAEEV  252 (372)
Q Consensus       179 ~~~l-~~~~~~~g~~vlI~G-ag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l-g---~~~v~~~~~~~~~~~~~~  252 (372)
                      |+++ .+++.++|++||||+ +|++|+++|.+|.+.|. .|+.+..+.+|++++.+. .   ..++  -++.+.+|...+
T Consensus      1541 YYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~--~NSRdtsFEq~v 1617 (2376)
T KOG1202|consen 1541 YYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNF--ANSRDTSFEQHV 1617 (2376)
T ss_pred             hhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhcc--cccccccHHHHH
Confidence            9998 579999999999995 59999999999999999 577777888888877653 3   2222  234456676555


Q ss_pred             HHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccch-hhhccCcEEEeeccC------CCcHHH
Q 017426          253 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT-PAAVREVDVVGVFRY------KNTWPL  325 (372)
Q Consensus       253 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~~~~~~------~~~~~~  325 (372)
                      .  .++.++++|+|++.... +.++.++++|+.+|||..+|-.+..-+.++. ...+++.+++|....      .+.+.+
T Consensus      1618 l--~~T~GrGVdlVLNSLae-EkLQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~e 1694 (2376)
T KOG1202|consen 1618 L--WHTKGRGVDLVLNSLAE-EKLQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWRE 1694 (2376)
T ss_pred             H--HHhcCCCeeeehhhhhH-HHHHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHH
Confidence            4  34568999999999985 5899999999999999999855443333443 356788888886542      456788


Q ss_pred             HHHHHHcCCCC--CCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          326 CLELLRSGKID--VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       326 ~~~ll~~g~~~--~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +.+++++|...  .+|+.+++|+-  .++++||+.+.+|++.||+|+++
T Consensus      1695 v~~Lv~eGIksGvV~PL~ttvF~~--~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1695 VAALVAEGIKSGVVRPLPTTVFHG--QQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred             HHHHHHhhhccCceeccccccccH--HHHHHHHHHHhccCccceEEEEE
Confidence            88888776542  48888899888  99999999999999999999874

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.93  E-value=1.3e-23  Score=181.04  Aligned_cols=287  Identities=17%  Similarity=0.171  Sum_probs=215.7

Q ss_pred             EecCC-CCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCccccc----ceeEEEEEecCCCccccccccccCCCCC
Q 017426           33 PFELP-SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH----ECAGVIEKVGSEVKTLVPGDRVTLVPGD  107 (372)
Q Consensus        33 ~~~~p-~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~----e~~G~V~~vG~~v~~~~~gd~v~~~~Gd  107 (372)
                      +++.+ ++++++|+||..|.+..|.....+..-.+.  ....|+.+|.    .++|+|++.  +.+.+++        ||
T Consensus        28 ~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~--~y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~--------GD   95 (343)
T KOG1196|consen   28 TVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPS--DYAPPYEPGKPIDGFGVAKVIDS--GHPNYKK--------GD   95 (343)
T ss_pred             eecccCCCCCccEEeEeeeecCCHHHHhhccCCCcc--cccCcccCCcEecCCceEEEEec--CCCCCCc--------Cc
Confidence            45544 458899999999999999877655432111  1223444432    678999984  5678999        77


Q ss_pred             EEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCc--eEECCC--CCCccccc--ccchhHHHHHH
Q 017426          108 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL--CFKLPD--NVSLEEGA--MCEPLSVGVHA  181 (372)
Q Consensus       108 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~--~~~~P~--~~~~~~aa--~~~~~~~a~~~  181 (372)
                      .|.+                               .=+|.||..+++..  ..++|.  +.++....  +=++..|||..
T Consensus        96 ~v~g-------------------------------~~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~G  144 (343)
T KOG1196|consen   96 LVWG-------------------------------IVGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAG  144 (343)
T ss_pred             eEEE-------------------------------eccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHH
Confidence            6664                               13799999998753  455544  33333333  33588899999


Q ss_pred             H-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-HhCCCeEEecCCCcccHHHHHHHHHHH
Q 017426          182 C-RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       182 l-~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      + +....+.|++|+|.|| |++|+.+.|+|+.+|. .|++...++++..+++ ++|.+..++|.+. .+..+++++..  
T Consensus       145 f~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~e-~~~~~aL~r~~--  220 (343)
T KOG1196|consen  145 FYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEE-SDLSAALKRCF--  220 (343)
T ss_pred             HHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccCc-cCHHHHHHHhC--
Confidence            8 5588999999999987 9999999999999999 7999999999999886 5799989998652 37777777753  


Q ss_pred             cCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC---Cc---cccchhhhccCcEEEeeccC------CCcHHHH
Q 017426          259 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH---EM---TVPLTPAAVREVDVVGVFRY------KNTWPLC  326 (372)
Q Consensus       259 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~---~~~~~~~~~~~~~i~~~~~~------~~~~~~~  326 (372)
                       ..++|+.||.+|+. .++..+..|+..||++.+|+-..   +.   -..+..+..+++.+.++...      .+.++.+
T Consensus       221 -P~GIDiYfeNVGG~-~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l  298 (343)
T KOG1196|consen  221 -PEGIDIYFENVGGK-MLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFL  298 (343)
T ss_pred             -CCcceEEEeccCcH-HHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHH
Confidence             68999999999985 88999999999999999996331   11   22334467888999886543      5667888


Q ss_pred             HHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          327 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       327 ~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ..++++|++.....+.  -++  +..+.||.-+-.|...||.++.+
T Consensus       299 ~~~ikegKI~y~edi~--~Gl--en~P~A~vglf~GkNvGKqiv~v  340 (343)
T KOG1196|consen  299 LPYIKEGKITYVEDIA--DGL--ENGPSALVGLFHGKNVGKQLVKV  340 (343)
T ss_pred             HHHHhcCceEEehhHH--HHH--hccHHHHHHHhccCcccceEEEe
Confidence            9999999995333332  245  99999999999999999999864

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.88  E-value=1.3e-22  Score=157.01  Aligned_cols=109  Identities=39%  Similarity=0.702  Sum_probs=97.3

Q ss_pred             CCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccccccccCCCCCEEEEcCCcCCCCC
Q 017426           41 PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRC  120 (372)
Q Consensus        41 ~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~  120 (372)
                      |+||+|||+++|+|++|++++.|.  ......+|.++|||++|+|+++|+++++|++        ||+|.+.+...|+.|
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~--~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~--------Gd~V~~~~~~~~~~c   70 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGG--PPPPPKFPLILGHEGVGVVVAVGPGVTDFKV--------GDRVVVSPNIGCGEC   70 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTS--SSSTSSSSEES-SEEEEEEEEESTTTTSSGT--------T-EEEEESEEETSSS
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhc--cccCCCCCcccccceeeeeeeeccccccccc--------cceeeeecccCccCc
Confidence            799999999999999999999874  2233678999999999999999999999999        999999999999999


Q ss_pred             ccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEEC
Q 017426          121 DHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL  160 (372)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~  160 (372)
                      ++|..+..++|.+...++.. .+|+|+||+.+++++++++
T Consensus        71 ~~c~~~~~~~c~~~~~~g~~-~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   71 EYCLSGRPNLCPNPEVLGLG-LDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             HHHHTTTGGGTTTBEETTTS-STCSSBSEEEEEGGGEEEE
T ss_pred             hhhcCCccccCCCCCEeEcC-CCCcccCeEEEehHHEEEC
Confidence            99999999999999888874 8999999999999999875

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.68  E-value=1.1e-15  Score=122.09  Aligned_cols=128  Identities=28%  Similarity=0.560  Sum_probs=112.5

Q ss_pred             HHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHH
Q 017426          200 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTA  279 (372)
Q Consensus       200 ~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~  279 (372)
                      ++|++++|+|+..|+ +|++++++++|.++++++|++.++++++  .++.+.++++.  .+.++|+||||+|.+..++.+
T Consensus         1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~--~~~~~~i~~~~--~~~~~d~vid~~g~~~~~~~~   75 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD--DDFVEQIRELT--GGRGVDVVIDCVGSGDTLQEA   75 (130)
T ss_dssp             HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT--SSHHHHHHHHT--TTSSEEEEEESSSSHHHHHHH
T ss_pred             ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc--ccccccccccc--ccccceEEEEecCcHHHHHHH
Confidence            589999999999995 7999999999999999999999988654  56888888875  245899999999988899999


Q ss_pred             HHHhccCCEEEEEcCCC-CCccccchhhhccCcEEEeeccCC-CcHHHHHHHHHc
Q 017426          280 LGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRYK-NTWPLCLELLRS  332 (372)
Q Consensus       280 ~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~ll~~  332 (372)
                      +.+++++|+++.+|... ....++...+..+++++.++..+. ++++++++++.+
T Consensus        76 ~~~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~  130 (130)
T PF00107_consen   76 IKLLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ  130 (130)
T ss_dssp             HHHEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred             HHHhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence            99999999999999877 566888888999999999998874 888999988764

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.39  E-value=2.4e-11  Score=113.96  Aligned_cols=173  Identities=18%  Similarity=0.264  Sum_probs=134.2

Q ss_pred             HHHHHHHh-cC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHH
Q 017426          177 VGVHACRR-AN-IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       177 ~a~~~l~~-~~-~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~  254 (372)
                      .++.++.+ .+ .-+|++|+|.|+|.+|+.+++.++.+|+ .|++++.++.|.+.++.+|+..+ .       ..    +
T Consensus       187 s~~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~----e  253 (413)
T cd00401         187 SLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------ME----E  253 (413)
T ss_pred             hhHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HH----H
Confidence            34566533 33 4689999999999999999999999999 58889999999999999998432 1       11    1


Q ss_pred             HHHHcCCcceEEEeCCCcHHHHHHH-HHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccCCC--cHH--HHHHH
Q 017426          255 IQKAMGTGIDVSFDCAGLNKTMSTA-LGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN--TWP--LCLEL  329 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~--~~~~l  329 (372)
                      ..    .++|+||+|+|.+..+... ++.++++|.++.+|..  +..++...+..+.+++.++..+..  .++  ..+.+
T Consensus       254 ~v----~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~L  327 (413)
T cd00401         254 AV----KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIIL  327 (413)
T ss_pred             HH----cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhh
Confidence            11    3689999999998778775 9999999999999854  446777778888999999887632  455  79999


Q ss_pred             HHcCCC-CCCCceEEE-----ecCChH-HHHHHHHHHhcCCC-ceEEEE
Q 017426          330 LRSGKI-DVKPLVTHR-----FGFSQK-EVEEAFETSARGGT-AIKVMF  370 (372)
Q Consensus       330 l~~g~~-~~~~~~~~~-----~~~~~~-~~~~A~~~~~~~~~-~gkvvv  370 (372)
                      +.+|.+ .+...++|.     ++|  + |+.+++..+.++.. ..|+++
T Consensus       328 La~Grlvnl~~~~gH~~~vmd~sf--~~q~l~a~~l~~~~~~~~~kV~~  374 (413)
T cd00401         328 LAEGRLVNLGCATGHPSFVMSNSF--TNQVLAQIELWTNRDKYEVGVYF  374 (413)
T ss_pred             hhCcCCCCCcccCCCccceechhH--HHHHHHHHHHHhcCCcCCCcEEE
Confidence            999998 666666655     555  8 99999998887643 346654

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.35  E-value=2.4e-11  Score=116.77  Aligned_cols=155  Identities=17%  Similarity=0.260  Sum_probs=114.6

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeE-EecCCC-----------cccHHHHHHH
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI-VKVSTN-----------LQDIAEEVEK  254 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v-~~~~~~-----------~~~~~~~~~~  254 (372)
                      ..++++|+|.|+|.+|+++++.|+.+|+ .|++++.++++.+.++++|++.+ ++..+.           ..++.+..++
T Consensus       162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~  240 (509)
T PRK09424        162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA  240 (509)
T ss_pred             CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence            4689999999999999999999999999 69999999999999999999854 332111           1133333333


Q ss_pred             HHHHcCCcceEEEeCCCcH-----HH-HHHHHHHhccCCEEEEEcCC-CCC--ccccchhhhc-cCcEEEeeccCCCcHH
Q 017426          255 IQKAMGTGIDVSFDCAGLN-----KT-MSTALGATCAGGKVCLVGMG-HHE--MTVPLTPAAV-REVDVVGVFRYKNTWP  324 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~~-----~~-~~~~~~~l~~~G~~v~~g~~-~~~--~~~~~~~~~~-~~~~i~~~~~~~~~~~  324 (372)
                      .......++|++|+|++.+     .. .+.+++.++++|+++.++.. ...  ...+...+.. +++++.+..+.+..+.
T Consensus       241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~p  320 (509)
T PRK09424        241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRLP  320 (509)
T ss_pred             HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhHH
Confidence            3221225799999999963     24 48999999999999999863 232  3444445555 8899999887755555


Q ss_pred             -HHHHHHHcCCCCCCCceE
Q 017426          325 -LCLELLRSGKIDVKPLVT  342 (372)
Q Consensus       325 -~~~~ll~~g~~~~~~~~~  342 (372)
                       ++.+++.++.+.+.+.++
T Consensus       321 ~~As~lla~~~i~l~~lIt  339 (509)
T PRK09424        321 TQSSQLYGTNLVNLLKLLC  339 (509)
T ss_pred             HHHHHHHHhCCccHHHHhc
Confidence             699999998886544444

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.25  E-value=3.9e-12  Score=101.10  Aligned_cols=119  Identities=25%  Similarity=0.361  Sum_probs=78.6

Q ss_pred             hCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCC--cHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccC
Q 017426          233 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG--LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVRE  310 (372)
Q Consensus       233 lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  310 (372)
                      ||++++++|..  +++         ...+++|+|||++|  ++..+..+.++| ++|+++.++.   .............
T Consensus         1 LGAd~vidy~~--~~~---------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~---~~~~~~~~~~~~~   65 (127)
T PF13602_consen    1 LGADEVIDYRD--TDF---------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG---DLPSFARRLKGRS   65 (127)
T ss_dssp             CT-SEEEETTC--SHH---------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S---HHHHHHHHHHCHH
T ss_pred             CCcCEEecCCC--ccc---------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC---cccchhhhhcccc
Confidence            68999998763  444         13589999999999  654446777888 9999998873   0000000011123


Q ss_pred             cEEEeecc------CCCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEE
Q 017426          311 VDVVGVFR------YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  370 (372)
Q Consensus       311 ~~i~~~~~------~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv  370 (372)
                      .+......      ..+.++++.+++++|++  ++.+.++|++  +++++|++.++++...||+|+
T Consensus        66 ~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l--~~~i~~~f~l--~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   66 IRYSFLFSVDPNAIRAEALEELAELVAEGKL--KPPIDRVFPL--EEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             CEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEG--GGHHHHHHHHHCT--SSEEEE
T ss_pred             eEEEEEEecCCCchHHHHHHHHHHHHHCCCe--EEeeccEECH--HHHHHHHHHHHhCCCCCeEeC
Confidence            33333321      23459999999999999  7889999999  999999999999999999996

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.46  E-value=2.6e-06  Score=82.13  Aligned_cols=105  Identities=20%  Similarity=0.282  Sum_probs=80.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCC-------------cccHHHHHHH
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-------------LQDIAEEVEK  254 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~-------------~~~~~~~~~~  254 (372)
                      .++++++|.|+|.+|++++++++.+|+ .|++.+.++++.+.++++|++.+. ++..             .+++.+...+
T Consensus       162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~-v~~~e~g~~~~gYa~~~s~~~~~~~~~  239 (511)
T TIGR00561       162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLE-LDFKEEGGSGDGYAKVMSEEFIAAEME  239 (511)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEe-ccccccccccccceeecCHHHHHHHHH
Confidence            467999999999999999999999999 588889999999999999987642 2211             1233433333


Q ss_pred             HHHHcCCcceEEEeCC---CcHH---HHHHHHHHhccCCEEEEEcC
Q 017426          255 IQKAMGTGIDVSFDCA---GLNK---TMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~---g~~~---~~~~~~~~l~~~G~~v~~g~  294 (372)
                      +......++|++|+|+   |.+.   ..+..++.|++++.+++++.
T Consensus       240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~  285 (511)
T TIGR00561       240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAA  285 (511)
T ss_pred             HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeee
Confidence            3332346899999999   5433   45678999999999999874

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.38  E-value=4.7e-06  Score=75.25  Aligned_cols=172  Identities=18%  Similarity=0.232  Sum_probs=103.6

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEecChhHHHHHHHh----CCCeEEecCCCcccHHHHHHHHHHH
Q 017426          184 RANIGPETNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       184 ~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~-~vv~v~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      .+.+++|++||.+|+|. |..+.++++..|.. .|++++.+++..+.+++.    +...+....   .+    +.++. .
T Consensus        72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~---~d----~~~l~-~  142 (272)
T PRK11873         72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL---GE----IEALP-V  142 (272)
T ss_pred             hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE---cc----hhhCC-C
Confidence            36688999999999877 88888888887753 699999999988887763    433221111   11    11111 0


Q ss_pred             cCCcceEEEeCC------CcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEee-ccCCCcHHHHHHHHH
Q 017426          259 MGTGIDVSFDCA------GLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV-FRYKNTWPLCLELLR  331 (372)
Q Consensus       259 ~~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~ll~  331 (372)
                      ..+.+|+|+...      +....+..+.+.|+++|+++..+..... .  +.....+...+.+. ........++.++++
T Consensus       143 ~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~  219 (272)
T PRK11873        143 ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-E--LPEEIRNDAELYAGCVAGALQEEEYLAMLA  219 (272)
T ss_pred             CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-C--CCHHHHHhHHHHhccccCCCCHHHHHHHHH
Confidence            135799998542      3345788999999999999987643322 1  11111112212211 112335667778887


Q ss_pred             cCCCC-CCCceEEEecCChHHHHHHHHHH--hcCCCceEEE
Q 017426          332 SGKID-VKPLVTHRFGFSQKEVEEAFETS--ARGGTAIKVM  369 (372)
Q Consensus       332 ~g~~~-~~~~~~~~~~~~~~~~~~A~~~~--~~~~~~gkvv  369 (372)
                      +..+. ........+.+  +++.++++.+  .++...++.+
T Consensus       220 ~aGf~~v~i~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~  258 (272)
T PRK11873        220 EAGFVDITIQPKREYRI--PDAREFLEDWGIAPGRQLDGYI  258 (272)
T ss_pred             HCCCCceEEEeccceec--ccHHHHHHHhccccccccCceE
Confidence            75442 22223344566  8888888887  5444334443

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.28  E-value=2.2e-06  Score=78.80  Aligned_cols=108  Identities=24%  Similarity=0.317  Sum_probs=82.7

Q ss_pred             CceEECCCCCCcccccccchhHHHHHHHHhcCC----CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHH-HH
Q 017426          155 DLCFKLPDNVSLEEGAMCEPLSVGVHACRRANI----GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRL-SV  229 (372)
Q Consensus       155 ~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~----~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~-~~  229 (372)
                      +..+++|+.++.+.++...+.++++.+++.+..    -++.+|+|.|+|.+|+.+++.++..|+..|+++++++++. ++
T Consensus       139 ~~a~~~~k~vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~l  218 (311)
T cd05213         139 QKAIKVGKRVRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEEL  218 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            457888999999999988888888888765432    3789999999999999999999998887888899988764 67


Q ss_pred             HHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHH
Q 017426          230 AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKT  275 (372)
Q Consensus       230 ~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  275 (372)
                      ++++|.. ++.+    .+    +.+..    ..+|+||.|++.+..
T Consensus       219 a~~~g~~-~~~~----~~----~~~~l----~~aDvVi~at~~~~~  251 (311)
T cd05213         219 AKELGGN-AVPL----DE----LLELL----NEADVVISATGAPHY  251 (311)
T ss_pred             HHHcCCe-EEeH----HH----HHHHH----hcCCEEEECCCCCch
Confidence            7888873 2221    12    22221    358999999998754

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.24  E-value=2.2e-05  Score=74.37  Aligned_cols=104  Identities=20%  Similarity=0.265  Sum_probs=79.2

Q ss_pred             HHHHHHHhc-CCC-CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHH
Q 017426          177 VGVHACRRA-NIG-PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       177 ~a~~~l~~~-~~~-~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~  254 (372)
                      .+|.++.++ ++. .|++|+|.|.|.+|+.+++.++.+|+ .|++++.++.+...+...|+. +.       ++    .+
T Consensus       197 s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~-------~l----~e  263 (425)
T PRK05476        197 SLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VM-------TM----EE  263 (425)
T ss_pred             hhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ec-------CH----HH
Confidence            456666554 544 89999999999999999999999999 688898888887666666654 21       11    22


Q ss_pred             HHHHcCCcceEEEeCCCcHHHHH-HHHHHhccCCEEEEEcCCCC
Q 017426          255 IQKAMGTGIDVSFDCAGLNKTMS-TALGATCAGGKVCLVGMGHH  297 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~  297 (372)
                      ..    .++|++|+++|....+. ..+..+++++.++..|..+.
T Consensus       264 al----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~  303 (425)
T PRK05476        264 AA----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDN  303 (425)
T ss_pred             HH----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence            22    37899999999876666 57888999998888876543

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.21  E-value=6.3e-05  Score=68.52  Aligned_cols=111  Identities=16%  Similarity=0.202  Sum_probs=81.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .+.+++|+|.|.+|+.+++.++.+|+ .|.+.++++++.+.++++|+..+ .+    .+    +.+..    ..+|+||+
T Consensus       151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~----~~----l~~~l----~~aDiVI~  216 (296)
T PRK08306        151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL----SE----LAEEV----GKIDIIFN  216 (296)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH----HH----HHHHh----CCCCEEEE
Confidence            58999999999999999999999999 68888899888888888887543 11    11    22222    47999999


Q ss_pred             CCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEe
Q 017426          269 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG  315 (372)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~  315 (372)
                      |++..-.....++.+++++.++.++..+....+  .....+.++..+
T Consensus       217 t~p~~~i~~~~l~~~~~g~vIIDla~~pggtd~--~~a~~~Gv~~~~  261 (296)
T PRK08306        217 TIPALVLTKEVLSKMPPEALIIDLASKPGGTDF--EYAEKRGIKALL  261 (296)
T ss_pred             CCChhhhhHHHHHcCCCCcEEEEEccCCCCcCe--eehhhCCeEEEE
Confidence            988643445677889999999988876655444  333344455554

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.12  E-value=1.7e-07  Score=89.52  Aligned_cols=159  Identities=19%  Similarity=0.233  Sum_probs=102.6

Q ss_pred             ccccceeEEEEEecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC
Q 017426           76 VIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD  155 (372)
Q Consensus        76 ~~G~e~~G~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~  155 (372)
                      .-|.|+++.+.+|++++++.             |++.+.. |++|.+|+.    .|.+....|. .-++.|++++.++. 
T Consensus        89 ~~~~~a~~hl~~Va~GldS~-------------V~GE~qI-~gQvk~a~~----~a~~~~~~g~-~l~~lf~~a~~~~k-  148 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDSM-------------VVGETQI-LGQVKNAYK----VAQEEKTVGK-VLERLFQKAFSVGK-  148 (417)
T ss_pred             cCchHHHHHHHHHHhhhhhh-------------hcCChHH-HHHHHHHHH----HHHHcCCchH-HHHHHHHHHHHHhh-
Confidence            46889999999998887653             4456666 889998843    3333333322 34578998887775 


Q ss_pred             ceEECCCCCCcccccccchhHHHHHHH----HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHH-HH
Q 017426          156 LCFKLPDNVSLEEGAMCEPLSVGVHAC----RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VA  230 (372)
Q Consensus       156 ~~~~~P~~~~~~~aa~~~~~~~a~~~l----~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~  230 (372)
                      .+..       +....-.+.+.++.++    +.....++++++|+|+|.+|..+++.++..|+..+++++++.++.+ ++
T Consensus       149 ~vr~-------~t~i~~~~vSv~~~Av~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la  221 (417)
T TIGR01035       149 RVRT-------ETDISAGAVSISSAAVELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLA  221 (417)
T ss_pred             hhhh-------hcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence            2221       1111011222333332    2334467899999999999999999999999778888988887754 67


Q ss_pred             HHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHH
Q 017426          231 KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK  274 (372)
Q Consensus       231 ~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  274 (372)
                      +.+|... +.+    .+    +.+..    .++|+||.|++.+.
T Consensus       222 ~~~g~~~-i~~----~~----l~~~l----~~aDvVi~aT~s~~  252 (417)
T TIGR01035       222 KELGGEA-VKF----ED----LEEYL----AEADIVISSTGAPH  252 (417)
T ss_pred             HHcCCeE-eeH----HH----HHHHH----hhCCEEEECCCCCC
Confidence            7777642 221    12    22221    47999999998764

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR00936 ahcY adenosylhomocysteinase

Probab=97.99  E-value=0.00017  Score=68.09  Aligned_cols=102  Identities=22%  Similarity=0.273  Sum_probs=77.0

Q ss_pred             HHHHHHh-cC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHH
Q 017426          178 GVHACRR-AN-IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI  255 (372)
Q Consensus       178 a~~~l~~-~~-~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~  255 (372)
                      ++.++.+ .+ ...|++|+|.|.|.+|+.+++.++.+|+ .|++++.++.+...+...|+. +.       +..+    .
T Consensus       181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~-------~lee----a  247 (406)
T TIGR00936       181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VM-------TMEE----A  247 (406)
T ss_pred             HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eC-------CHHH----H
Confidence            4555544 33 4689999999999999999999999999 588898888887766766763 21       1111    1


Q ss_pred             HHHcCCcceEEEeCCCcHHHHHH-HHHHhccCCEEEEEcCCC
Q 017426          256 QKAMGTGIDVSFDCAGLNKTMST-ALGATCAGGKVCLVGMGH  296 (372)
Q Consensus       256 ~~~~~~~~d~vid~~g~~~~~~~-~~~~l~~~G~~v~~g~~~  296 (372)
                      .    .+.|++|+++|....+.. .+..+++++.++.+|...
T Consensus       248 l----~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~  285 (406)
T TIGR00936       248 A----KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD  285 (406)
T ss_pred             H----hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence            1    357999999998877764 788899999988887654

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=97.98  E-value=0.00044  Score=61.52  Aligned_cols=131  Identities=22%  Similarity=0.310  Sum_probs=83.9

Q ss_pred             cceeEEEecCCceEECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          145 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       145 ~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      +|.+|.. +...++.+++++++..+....+. .....+.. .+.++++||-.|+|. |..++.++ ..|+..+++++.++
T Consensus        78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~tt~-~~l~~l~~-~~~~~~~VLDiGcGs-G~l~i~~~-~~g~~~v~giDis~  152 (250)
T PRK00517         78 SWEDPPD-PDEINIELDPGMAFGTGTHPTTR-LCLEALEK-LVLPGKTVLDVGCGS-GILAIAAA-KLGAKKVLAVDIDP  152 (250)
T ss_pred             CCcCCCC-CCeEEEEECCCCccCCCCCHHHH-HHHHHHHh-hcCCCCEEEEeCCcH-HHHHHHHH-HcCCCeEEEEECCH
Confidence            4555544 66778999999888876532221 22233322 256889999999976 87777654 46776799999999


Q ss_pred             hHHHHHHHh----CCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcH---HHHHHHHHHhccCCEEEEEcCC
Q 017426          225 YRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN---KTMSTALGATCAGGKVCLVGMG  295 (372)
Q Consensus       225 ~~~~~~~~l----g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~  295 (372)
                      ...+.+++.    +....+....               ....||+|+......   ..+..+.+.|+++|.++..+..
T Consensus       153 ~~l~~A~~n~~~~~~~~~~~~~~---------------~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~  215 (250)
T PRK00517        153 QAVEAARENAELNGVELNVYLPQ---------------GDLKADVIVANILANPLLELAPDLARLLKPGGRLILSGIL  215 (250)
T ss_pred             HHHHHHHHHHHHcCCCceEEEcc---------------CCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECc
Confidence            988776552    2211111000               012699998765432   2456788889999999987643

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.87  E-value=0.00019  Score=60.72  Aligned_cols=110  Identities=16%  Similarity=0.196  Sum_probs=80.4

Q ss_pred             ccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhH----HHHHHHhCCCeEEecC-CCc
Q 017426          171 MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYR----LSVAKEIGADNIVKVS-TNL  245 (372)
Q Consensus       171 ~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~----~~~~~~lg~~~v~~~~-~~~  245 (372)
                      +++.......+++...+++|++||-+|+| +|..++-+++..|  .|+.+++.++-    ...++.+|...+.... +..
T Consensus        54 tis~P~~vA~m~~~L~~~~g~~VLEIGtG-sGY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~  130 (209)
T COG2518          54 TISAPHMVARMLQLLELKPGDRVLEIGTG-SGYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGDGS  130 (209)
T ss_pred             eecCcHHHHHHHHHhCCCCCCeEEEECCC-chHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcc
Confidence            34434455567788899999999999976 4899999999888  68999998874    3345668876554322 211


Q ss_pred             ccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEE
Q 017426          246 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  292 (372)
                      ..|.         ...+||.|+-+.+.+..-...++.|+++|+++.-
T Consensus       131 ~G~~---------~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~P  168 (209)
T COG2518         131 KGWP---------EEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIP  168 (209)
T ss_pred             cCCC---------CCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEE
Confidence            2221         1478999998888765667889999999998875

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.84  E-value=0.0011  Score=59.91  Aligned_cols=139  Identities=13%  Similarity=0.142  Sum_probs=86.1

Q ss_pred             CcceeEEEecCCceEECCCCCCcccccccchhHHHHHHHHh---cCCCCCCEEEEECC-CHHHHHHHHHHH-HcCCCeEE
Q 017426          144 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRR---ANIGPETNVLIMGA-GPIGLVTMLAAR-AFGAPRIV  218 (372)
Q Consensus       144 g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~---~~~~~g~~vlI~Ga-g~~G~~ai~l~~-~~g~~~vv  218 (372)
                      -.|-+|.++..+..+.-  .....++..-+.+.|+|..-+-   .+.-..+.|+|.+| +-+++.++..++ ..+...+|
T Consensus        89 ~~YN~Y~r~~~d~~y~~--~~e~~~~LlrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~v  166 (314)
T PF11017_consen   89 PIYNQYLRVSADPAYDP--EREDWQMLLRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVV  166 (314)
T ss_pred             hhhhceeecCCCcccCc--chhHHHHHHHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEE
Confidence            45556666665543311  1111122223455677755432   22233356777777 888888888888 55555788


Q ss_pred             EEecChhHHHHHHHhC-CCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCC-EEEEEcCCC
Q 017426          219 IVDVDDYRLSVAKEIG-ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGG-KVCLVGMGH  296 (372)
Q Consensus       219 ~v~~~~~~~~~~~~lg-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G-~~v~~g~~~  296 (372)
                      +++ |..+.++.+.+| .+.++.|++        +..+.   ...--+++|..|.......+..++...= ..+.+|..+
T Consensus       167 glT-S~~N~~Fve~lg~Yd~V~~Yd~--------i~~l~---~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th  234 (314)
T PF11017_consen  167 GLT-SARNVAFVESLGCYDEVLTYDD--------IDSLD---APQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH  234 (314)
T ss_pred             EEe-cCcchhhhhccCCceEEeehhh--------hhhcc---CCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence            884 567777999999 566777654        33331   3567788999999888888888887653 345556443

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.81  E-value=4.5e-05  Score=73.21  Aligned_cols=159  Identities=21%  Similarity=0.310  Sum_probs=99.8

Q ss_pred             ccccceeEEEEEecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC
Q 017426           76 VIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD  155 (372)
Q Consensus        76 ~~G~e~~G~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~  155 (372)
                      .-|+|+++.+.+|++++++.-+        |+     +.. |++|...    ...|......+. ..++.|++.      
T Consensus        91 ~~g~ea~~hl~~V~~GldS~V~--------GE-----~qI-lgQvk~a----~~~a~~~g~~g~-~l~~lf~~a------  145 (423)
T PRK00045         91 HEGEEAVRHLFRVASGLDSMVL--------GE-----PQI-LGQVKDA----YALAQEAGTVGT-ILNRLFQKA------  145 (423)
T ss_pred             cCCHHHHHHHHHHHhhhhhhhc--------CC-----hHH-HHHHHHH----HHHHHHcCCchH-HHHHHHHHH------
Confidence            4699999999999998876544        43     222 3444311    111211111111 123455443      


Q ss_pred             ceEECCCCCCcccccccchhHHHHHHHHhcC----CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHH-HH
Q 017426          156 LCFKLPDNVSLEEGAMCEPLSVGVHACRRAN----IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VA  230 (372)
Q Consensus       156 ~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~----~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~  230 (372)
                        +++|..+..+.+..-.+.++++.+++.+.    -.++.+|+|+|+|.+|.++++.++..|+..+++++++.++.. ++
T Consensus       146 --~~~~k~v~~~t~i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la  223 (423)
T PRK00045        146 --FSVAKRVRTETGIGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELA  223 (423)
T ss_pred             --HHHHhhHhhhcCCCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH
Confidence              34444444444444446677777775432    257899999999999999999999999877888889888755 77


Q ss_pred             HHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHH
Q 017426          231 KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK  274 (372)
Q Consensus       231 ~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  274 (372)
                      +.+|.. ++.+    .+    +.+.    -.++|+||+|++.+.
T Consensus       224 ~~~g~~-~~~~----~~----~~~~----l~~aDvVI~aT~s~~  254 (423)
T PRK00045        224 EEFGGE-AIPL----DE----LPEA----LAEADIVISSTGAPH  254 (423)
T ss_pred             HHcCCc-EeeH----HH----HHHH----hccCCEEEECCCCCC
Confidence            778854 2221    11    2222    147999999998764

>PLN02494 adenosylhomocysteinase

Probab=97.77  E-value=0.00024  Score=67.72  Aligned_cols=102  Identities=18%  Similarity=0.230  Sum_probs=77.6

Q ss_pred             HHHHHHh-cC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHH
Q 017426          178 GVHACRR-AN-IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI  255 (372)
Q Consensus       178 a~~~l~~-~~-~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~  255 (372)
                      .+.++.+ .+ .-.|++++|.|.|.+|+.+++.++.+|+ .|++++.++.+...+...|+..+        ++.    +.
T Consensus       240 ~~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv--------~le----Ea  306 (477)
T PLN02494        240 LPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL--------TLE----DV  306 (477)
T ss_pred             HHHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec--------cHH----HH
Confidence            4566543 33 3679999999999999999999999999 68889888877666666776421        111    22


Q ss_pred             HHHcCCcceEEEeCCCcHHHH-HHHHHHhccCCEEEEEcCCC
Q 017426          256 QKAMGTGIDVSFDCAGLNKTM-STALGATCAGGKVCLVGMGH  296 (372)
Q Consensus       256 ~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~  296 (372)
                      .    ...|++|.+.|....+ ...+..|++++.++.+|...
T Consensus       307 l----~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~  344 (477)
T PLN02494        307 V----SEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD  344 (477)
T ss_pred             H----hhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence            1    3579999999986543 78999999999999998643

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.67  E-value=0.00044  Score=65.06  Aligned_cols=96  Identities=24%  Similarity=0.312  Sum_probs=66.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-HhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      ++.+|+|.|+|.+|+.+++.++.+|+ .|+++++++++.+.+. .++......+. .    .+.+.+..    ..+|++|
T Consensus       166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~-~----~~~l~~~l----~~aDvVI  235 (370)
T TIGR00518       166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYS-N----AYEIEDAV----KRADLLI  235 (370)
T ss_pred             CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccC-C----HHHHHHHH----ccCCEEE
Confidence            34569999999999999999999999 5888888888877664 45543222111 1    11233322    4799999


Q ss_pred             eCCC---c--HH-HHHHHHHHhccCCEEEEEcC
Q 017426          268 DCAG---L--NK-TMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       268 d~~g---~--~~-~~~~~~~~l~~~G~~v~~g~  294 (372)
                      +|++   .  +. .....+..+++++.++.++.
T Consensus       236 ~a~~~~g~~~p~lit~~~l~~mk~g~vIvDva~  268 (370)
T TIGR00518       236 GAVLIPGAKAPKLVSNSLVAQMKPGAVIVDVAI  268 (370)
T ss_pred             EccccCCCCCCcCcCHHHHhcCCCCCEEEEEec
Confidence            9973   2  11 13567788999999999874

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.62  E-value=0.00073  Score=61.25  Aligned_cols=99  Identities=16%  Similarity=0.199  Sum_probs=71.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .|.+++|.|.|.+|++++..++.+|+ .|.+.++++++.+.+..+|...+ .       + +.+.+..    ..+|+||+
T Consensus       150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~-------~-~~l~~~l----~~aDiVin  215 (287)
T TIGR02853       150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-P-------L-NKLEEKV----AEIDIVIN  215 (287)
T ss_pred             CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c-------H-HHHHHHh----ccCCEEEE
Confidence            47899999999999999999999998 68888888887777666665432 1       1 1122222    57999999


Q ss_pred             CCCcHHHHHHHHHHhccCCEEEEEcCCCCCccc
Q 017426          269 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTV  301 (372)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  301 (372)
                      +++..-.-...+..++++..++.++..+..+++
T Consensus       216 t~P~~ii~~~~l~~~k~~aliIDlas~Pg~tdf  248 (287)
T TIGR02853       216 TIPALVLTADVLSKLPKHAVIIDLASKPGGTDF  248 (287)
T ss_pred             CCChHHhCHHHHhcCCCCeEEEEeCcCCCCCCH
Confidence            987542223566778887778888766655444

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK08324 short chain dehydrogenase; Validated

Probab=97.61  E-value=0.00089  Score=68.48  Aligned_cols=117  Identities=22%  Similarity=0.250  Sum_probs=71.4

Q ss_pred             CcceeEEEecCCceEECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEec
Q 017426          144 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV  222 (372)
Q Consensus       144 g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~  222 (372)
                      -++.+|..+++..++.+ +.++.++|.....        -....-+|+++||+|+ |.+|.++++.+...|+ .|+++++
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~--------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~r  454 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRM--------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLADL  454 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhhhcC--------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEeC
Confidence            45567777776666666 5555555531100        0112236789999987 9999999999999999 5888888


Q ss_pred             ChhHHHHH-HHhCC---CeEEecCCCc-ccHHHHHHHHHHHcCCcceEEEeCCC
Q 017426          223 DDYRLSVA-KEIGA---DNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFDCAG  271 (372)
Q Consensus       223 ~~~~~~~~-~~lg~---~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~vid~~g  271 (372)
                      ++++.+.+ +.++.   ...+..+-.+ .+..+.+.+..+ ..+++|++|++.|
T Consensus       455 ~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~-~~g~iDvvI~~AG  507 (681)
T PRK08324        455 DEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAAL-AFGGVDIVVSNAG  507 (681)
T ss_pred             CHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHH-HcCCCCEEEECCC
Confidence            88776544 33443   1122222222 223333333332 2358999999988

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.59  E-value=4.3e-05  Score=76.33  Aligned_cols=81  Identities=22%  Similarity=0.396  Sum_probs=56.8

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecC---------------------hhHHHHHHHhCCCeEEecCCC
Q 017426          186 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD---------------------DYRLSVAKEIGADNIVKVSTN  244 (372)
Q Consensus       186 ~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~---------------------~~~~~~~~~lg~~~v~~~~~~  244 (372)
                      ..++|++|+|+|+|++|+++++.++..|++ |++++..                     +++.+.++++|++..++... 
T Consensus       133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~~-V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~-  210 (564)
T PRK12771        133 APDTGKRVAVIGGGPAGLSAAYHLRRMGHA-VTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV-  210 (564)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCe-EEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE-
Confidence            367899999999999999999999999995 7777642                     35667788899765443211 


Q ss_pred             cccHHHHHHHHHHHcCCcceEEEeCCCcHH
Q 017426          245 LQDIAEEVEKIQKAMGTGIDVSFDCAGLNK  274 (372)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  274 (372)
                      ..+..  ....    ..++|+||+++|...
T Consensus       211 ~~~~~--~~~~----~~~~D~Vi~AtG~~~  234 (564)
T PRK12771        211 GEDIT--LEQL----EGEFDAVFVAIGAQL  234 (564)
T ss_pred             CCcCC--HHHH----HhhCCEEEEeeCCCC
Confidence            01211  1111    236999999999753

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.54  E-value=0.00042  Score=55.40  Aligned_cols=73  Identities=23%  Similarity=0.337  Sum_probs=53.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCC--eEEecCCCcccHHHHHHHHHHHcCCcceE
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~d~  265 (372)
                      .+.++||.|+|++|.+++..+...|++.+.++.++.+|.+.+ +.++..  ..+.++    ++.    +..    ..+|+
T Consensus        11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~----~~~----~~~----~~~Di   78 (135)
T PF01488_consen   11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE----DLE----EAL----QEADI   78 (135)
T ss_dssp             TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG----GHC----HHH----HTESE
T ss_pred             CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH----HHH----HHH----hhCCe
Confidence            578999999999999999999999998899999998876644 566433  233332    221    121    47999


Q ss_pred             EEeCCCcH
Q 017426          266 SFDCAGLN  273 (372)
Q Consensus       266 vid~~g~~  273 (372)
                      ||+|++.+
T Consensus        79 vI~aT~~~   86 (135)
T PF01488_consen   79 VINATPSG   86 (135)
T ss_dssp             EEE-SSTT
T ss_pred             EEEecCCC
Confidence            99998875

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.43  E-value=0.0028  Score=54.29  Aligned_cols=103  Identities=21%  Similarity=0.353  Sum_probs=70.5

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHH----HhC-CCeEEecCCCcccHHHHHHHH
Q 017426          182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAK----EIG-ADNIVKVSTNLQDIAEEVEKI  255 (372)
Q Consensus       182 l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~----~lg-~~~v~~~~~~~~~~~~~~~~~  255 (372)
                      +....+.++++||..|+|. |.+++.+++..+. ..+++++.+++..+.++    .++ ...+....   .+..+.+.. 
T Consensus        33 l~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~---~d~~~~l~~-  107 (198)
T PRK00377         33 LSKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK---GEAPEILFT-  107 (198)
T ss_pred             HHHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE---echhhhHhh-
Confidence            4557788999999999877 8888899887642 37999999998877654    456 33333221   222222222 


Q ss_pred             HHHcCCcceEEEeCCCc---HHHHHHHHHHhccCCEEEEE
Q 017426          256 QKAMGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       256 ~~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~  292 (372)
                         ....+|.||...+.   ...+..+.+.|+++|+++..
T Consensus       108 ---~~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~  144 (198)
T PRK00377        108 ---INEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVID  144 (198)
T ss_pred             ---cCCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence               13579999985443   34677788899999998853

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.40  E-value=0.0017  Score=57.56  Aligned_cols=85  Identities=24%  Similarity=0.278  Sum_probs=59.5

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhC----C-CeEEecCCCcccHHHHHHHHHHHcC
Q 017426          188 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIG----A-DNIVKVSTNLQDIAEEVEKIQKAMG  260 (372)
Q Consensus       188 ~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg----~-~~v~~~~~~~~~~~~~~~~~~~~~~  260 (372)
                      ..+.++||+|| +++|...+..+...|. .++.+.++.+|.+.+ +++.    . ..++..|-.+.+-.+.+.+.....+
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            45789999999 9999999999999999 577777888887755 3443    1 2355555444444444444333345


Q ss_pred             CcceEEEeCCCcH
Q 017426          261 TGIDVSFDCAGLN  273 (372)
Q Consensus       261 ~~~d~vid~~g~~  273 (372)
                      ..+|+.+++.|-.
T Consensus        83 ~~IdvLVNNAG~g   95 (265)
T COG0300          83 GPIDVLVNNAGFG   95 (265)
T ss_pred             CcccEEEECCCcC
Confidence            6899999998764

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.39  E-value=0.0054  Score=53.85  Aligned_cols=105  Identities=20%  Similarity=0.193  Sum_probs=65.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhC---CCeEEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIG---ADNIVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg---~~~v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      .++++||+|+ |.+|..+++.+...|+ .|+.+.+++++.+.+ +.+.   ....+..+-.+ .+..+.+.+... ..++
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~~   81 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAK-VLNA   81 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHH-HhCC
Confidence            3679999998 9999999999999999 577777887766554 3332   22233333222 222232332221 1257


Q ss_pred             ceEEEeCCCcH-----------------------HHHHHHHHHhccCCEEEEEcCC
Q 017426          263 IDVSFDCAGLN-----------------------KTMSTALGATCAGGKVCLVGMG  295 (372)
Q Consensus       263 ~d~vid~~g~~-----------------------~~~~~~~~~l~~~G~~v~~g~~  295 (372)
                      +|.++.+.+..                       ...+..++.+..+|+++.++..
T Consensus        82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~  137 (238)
T PRK05786         82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM  137 (238)
T ss_pred             CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence            89999887642                       0133455566678888888743

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.35  E-value=0.0013  Score=62.92  Aligned_cols=93  Identities=20%  Similarity=0.281  Sum_probs=71.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .-.|.+++|.|.|.+|+.+++.++.+|+ .|+++++++.+...+...|+..+        ++    .++.    ...|+|
T Consensus       251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~--------~l----eell----~~ADIV  313 (476)
T PTZ00075        251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQVV--------TL----EDVV----ETADIF  313 (476)
T ss_pred             CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCceec--------cH----HHHH----hcCCEE
Confidence            4579999999999999999999999999 58888887777655555565321        12    2222    468999


Q ss_pred             EeCCCcHHHHH-HHHHHhccCCEEEEEcCCC
Q 017426          267 FDCAGLNKTMS-TALGATCAGGKVCLVGMGH  296 (372)
Q Consensus       267 id~~g~~~~~~-~~~~~l~~~G~~v~~g~~~  296 (372)
                      +.+.|....+. ..+..|++++.++.+|...
T Consensus       314 I~atGt~~iI~~e~~~~MKpGAiLINvGr~d  344 (476)
T PTZ00075        314 VTATGNKDIITLEHMRRMKNNAIVGNIGHFD  344 (476)
T ss_pred             EECCCcccccCHHHHhccCCCcEEEEcCCCc
Confidence            99998765554 7888999999999988654

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.27  E-value=0.0035  Score=57.62  Aligned_cols=103  Identities=23%  Similarity=0.294  Sum_probs=72.3

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHH----HhCCCeEEecCCCcccHHHHHHHH
Q 017426          181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKI  255 (372)
Q Consensus       181 ~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~~~~  255 (372)
                      .++...++++++||..|+| .|..++.+++..+. ..|++++.+++..+.++    +.|.+.+....   .|..+.... 
T Consensus        72 ll~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~---gD~~~~~~~-  146 (322)
T PRK13943         72 FMEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC---GDGYYGVPE-  146 (322)
T ss_pred             HHHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe---CChhhcccc-
Confidence            4456678899999999987 59999999988763 25899999998765544    46665443321   222221111 


Q ss_pred             HHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEE
Q 017426          256 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       256 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  292 (372)
                          ..++|+|+.+.+........++.|+++|+++..
T Consensus       147 ----~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        147 ----FAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             ----cCCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence                257999999888665666788899999998763

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.21  E-value=0.0037  Score=56.49  Aligned_cols=81  Identities=19%  Similarity=0.258  Sum_probs=54.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCc-ccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+.+...+...+ ..|-.+ .++.+.+.+..+..++.+|++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~-~~Dl~d~~~~~~~~~~~~~~~~g~id~l   80 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAF-QLDYAEPESIAALVAQVLELSGGRLDAL   80 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEE-EccCCCHHHHHHHHHHHHHHcCCCccEE
Confidence            4578999998 9999999999988998 57888888887776666554432 223222 233334444333224579999


Q ss_pred             EeCCC
Q 017426          267 FDCAG  271 (372)
Q Consensus       267 id~~g  271 (372)
                      |++.|
T Consensus        81 i~~Ag   85 (277)
T PRK05993         81 FNNGA   85 (277)
T ss_pred             EECCC
Confidence            99875

>PRK12742 oxidoreductase; Provisional

Probab=97.11  E-value=0.01  Score=51.96  Aligned_cols=78  Identities=22%  Similarity=0.290  Sum_probs=48.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE-ecChhHHH-HHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v-~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~  265 (372)
                      .+.++||+|+ |.+|.++++.+...|++ ++.+ .+++++.+ +..+++... +..+..+.+   .+.+..+. .+++|+
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~l~~~~~~~~-~~~D~~~~~---~~~~~~~~-~~~id~   78 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGAN-VRFTYAGSKDAAERLAQETGATA-VQTDSADRD---AVIDVVRK-SGALDI   78 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEecCCCHHHHHHHHHHhCCeE-EecCCCCHH---HHHHHHHH-hCCCcE
Confidence            3679999997 99999999999999995 5444 33444443 335556543 223322211   22222221 257999


Q ss_pred             EEeCCCc
Q 017426          266 SFDCAGL  272 (372)
Q Consensus       266 vid~~g~  272 (372)
                      +|++.|.
T Consensus        79 li~~ag~   85 (237)
T PRK12742         79 LVVNAGI   85 (237)
T ss_pred             EEECCCC
Confidence            9998764

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=97.05  E-value=0.0025  Score=54.82  Aligned_cols=106  Identities=21%  Similarity=0.241  Sum_probs=68.7

Q ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEecChhHHHH----HHHhCCCeEEecCC-CcccHHH
Q 017426          177 VGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSV----AKEIGADNIVKVST-NLQDIAE  250 (372)
Q Consensus       177 ~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~-~vv~v~~~~~~~~~----~~~lg~~~v~~~~~-~~~~~~~  250 (372)
                      .-..+++...+++|++||-+|+| .|..++-+++..|.. .|+.++..++-.+.    ++.++...+..... ....+  
T Consensus        60 ~~a~~l~~L~l~pg~~VLeIGtG-sGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~--  136 (209)
T PF01135_consen   60 MVARMLEALDLKPGDRVLEIGTG-SGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGW--  136 (209)
T ss_dssp             HHHHHHHHTTC-TT-EEEEES-T-TSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTT--
T ss_pred             HHHHHHHHHhcCCCCEEEEecCC-CcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhcc--
Confidence            34445677889999999999875 378888888877643 58899888865444    44567654432211 11111  


Q ss_pred             HHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEE
Q 017426          251 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       251 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  292 (372)
                           .  ...+||.|+-+.+.+..-...++.|+++|+++.-
T Consensus       137 -----~--~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p  171 (209)
T PF01135_consen  137 -----P--EEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP  171 (209)
T ss_dssp             -----G--GG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred             -----c--cCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence                 1  1368999998887765667888999999999874

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=97.05  E-value=0.016  Score=45.01  Aligned_cols=102  Identities=24%  Similarity=0.314  Sum_probs=67.2

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHHH
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      ....+++++++|-.|+|. |..+..+++..+...+++++.++...+.+++    ++...+.....   +........   
T Consensus        13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~---~~~~~~~~~---   85 (124)
T TIGR02469        13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEG---DAPEALEDS---   85 (124)
T ss_pred             HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEec---cccccChhh---
Confidence            445677788888899866 8888899988755579999999987776543    44433221111   111001111   


Q ss_pred             cCCcceEEEeCCCc---HHHHHHHHHHhccCCEEEEE
Q 017426          259 MGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       259 ~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~  292 (372)
                       ...+|+|+-....   ...++.+.+.|+++|.++..
T Consensus        86 -~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~  121 (124)
T TIGR02469        86 -LPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN  121 (124)
T ss_pred             -cCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence             3579999975432   23677899999999998864

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=96.96  E-value=0.011  Score=53.69  Aligned_cols=96  Identities=20%  Similarity=0.273  Sum_probs=62.8

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh----CCCe-EEecCCCcccHHHHHHHHHHHcCC
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GADN-IVKVSTNLQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l----g~~~-v~~~~~~~~~~~~~~~~~~~~~~~  261 (372)
                      .+++++||-.|+|. |..++.+++ .|+..+++++.++...+.+++.    +... +.....   +    ....   ..+
T Consensus       157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~---~----~~~~---~~~  224 (288)
T TIGR00406       157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI---Y----LEQP---IEG  224 (288)
T ss_pred             cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec---c----cccc---cCC
Confidence            45789999999876 777766654 5777899999999887766552    2211 111111   1    1011   135


Q ss_pred             cceEEEeCCCcH---HHHHHHHHHhccCCEEEEEcC
Q 017426          262 GIDVSFDCAGLN---KTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       262 ~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      +||+|+......   ..+..+.+.|+++|.++..+.
T Consensus       225 ~fDlVvan~~~~~l~~ll~~~~~~LkpgG~li~sgi  260 (288)
T TIGR00406       225 KADVIVANILAEVIKELYPQFSRLVKPGGWLILSGI  260 (288)
T ss_pred             CceEEEEecCHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            899999755432   345567889999999988654

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=96.92  E-value=0.01  Score=51.44  Aligned_cols=81  Identities=30%  Similarity=0.370  Sum_probs=55.7

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCC--CeEEecCCC-cccHHHHHHHHHHHcCCcce
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGA--DNIVKVSTN-LQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~--~~v~~~~~~-~~~~~~~~~~~~~~~~~~~d  264 (372)
                      ++.++|+|| +++|.+.++.+...|+ +|+.+.+..++.+. +.+++.  ......|-. ..+..+.+..+.+ ..+.+|
T Consensus         6 ~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~-~~g~iD   83 (246)
T COG4221           6 GKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPE-EFGRID   83 (246)
T ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHH-hhCccc
Confidence            467899998 9999999999999999 57777788887764 466773  222222222 2334444544433 357899


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++++..|.
T Consensus        84 iLvNNAGl   91 (246)
T COG4221          84 ILVNNAGL   91 (246)
T ss_pred             EEEecCCC
Confidence            99998775

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=96.89  E-value=0.0097  Score=50.01  Aligned_cols=82  Identities=23%  Similarity=0.322  Sum_probs=57.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC---CeEEecCCCcccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA---DNIVKVSTNLQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~d  264 (372)
                      .|.+|||.|+ +++|++.++-...+|= .|+++.+++++.+.+++...   ..+.+.  .+.+-..++-+|....--..+
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv--~d~~~~~~lvewLkk~~P~lN   80 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDV--ADRDSRRELVEWLKKEYPNLN   80 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecc--cchhhHHHHHHHHHhhCCchh
Confidence            4789999975 9999999999999996 68888899999998877542   223332  223333344444443345689


Q ss_pred             EEEeCCCcH
Q 017426          265 VSFDCAGLN  273 (372)
Q Consensus       265 ~vid~~g~~  273 (372)
                      +++++.|-.
T Consensus        81 vliNNAGIq   89 (245)
T COG3967          81 VLINNAGIQ   89 (245)
T ss_pred             eeeeccccc
Confidence            999988753

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.88  E-value=0.029  Score=50.28  Aligned_cols=107  Identities=21%  Similarity=0.230  Sum_probs=65.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH----HHhCCCe-EE--ecCCCc-ccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IV--KVSTNL-QDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~-~~~~~~~~~~~~~~  259 (372)
                      .|..|+|+|| +++|.+.+.-.-..|++. +.+.+..++.+.+    ++.+... ++  ..|-.+ ++..+.+.. ....
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l-~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~-~~~~   88 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKL-VLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEW-AIRH   88 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCce-EEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHH-HHHh
Confidence            3678899999 999998888778889864 4444556555444    4455433 32  223222 333334422 2223


Q ss_pred             CCcceEEEeCCCcH-------------------------HHHHHHHHHhccC--CEEEEEcCCCC
Q 017426          260 GTGIDVSFDCAGLN-------------------------KTMSTALGATCAG--GKVCLVGMGHH  297 (372)
Q Consensus       260 ~~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~--G~~v~~g~~~~  297 (372)
                      -+++|+.++..|-.                         .....++..|++.  |+++.++...+
T Consensus        89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG  153 (282)
T KOG1205|consen   89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAG  153 (282)
T ss_pred             cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccc
Confidence            57999999987653                         1234566777544  89998875433

>PRK14967 putative methyltransferase; Provisional

Probab=96.84  E-value=0.026  Score=49.23  Aligned_cols=99  Identities=27%  Similarity=0.326  Sum_probs=64.3

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHH
Q 017426          182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       182 l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      +....++++++||-.|+|. |..++.+++. +...+++++.+++..+.+++    .+....+ ..   .++.+.+     
T Consensus        29 l~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~-~~---~d~~~~~-----   97 (223)
T PRK14967         29 LAAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDV-RR---GDWARAV-----   97 (223)
T ss_pred             HHhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEE-EE---Cchhhhc-----
Confidence            4445678899999999876 8888888765 65579999999987775543    3432111 11   2332211     


Q ss_pred             HcCCcceEEEeCCCc---------------------------HHHHHHHHHHhccCCEEEEE
Q 017426          258 AMGTGIDVSFDCAGL---------------------------NKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       258 ~~~~~~d~vid~~g~---------------------------~~~~~~~~~~l~~~G~~v~~  292 (372)
                       ....+|+|+...+.                           ...+..+.+.|+++|+++.+
T Consensus        98 -~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~  158 (223)
T PRK14967         98 -EFRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV  158 (223)
T ss_pred             -cCCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence             13579999864210                           11345677899999998865

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=96.84  E-value=0.026  Score=46.97  Aligned_cols=102  Identities=23%  Similarity=0.294  Sum_probs=70.1

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHH----HHhCCCeEEecCCCcccHHHHHHHHHHH
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~----~~lg~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      ...++++|+.++=.|||. |...+++++..-..+++++++++++.+..    ++||.+.+.....   +-.+.+..    
T Consensus        28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g---~Ap~~L~~----   99 (187)
T COG2242          28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG---DAPEALPD----   99 (187)
T ss_pred             HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec---cchHhhcC----
Confidence            456788999666678753 67777888554445899999999987765    4588776654432   22333322    


Q ss_pred             cCCcceEEEeCCCc--HHHHHHHHHHhccCCEEEEEc
Q 017426          259 MGTGIDVSFDCAGL--NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       259 ~~~~~d~vid~~g~--~~~~~~~~~~l~~~G~~v~~g  293 (372)
                       ...+|.+|---|.  +..++.++..|+++|+++.-.
T Consensus       100 -~~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~na  135 (187)
T COG2242         100 -LPSPDAIFIGGGGNIEEILEAAWERLKPGGRLVANA  135 (187)
T ss_pred             -CCCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence             1269999854332  357888999999999998754

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.83  E-value=0.02  Score=49.51  Aligned_cols=104  Identities=17%  Similarity=0.209  Sum_probs=68.2

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHH
Q 017426          180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       180 ~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~  254 (372)
                      .+++...++++++||-+|+|. |..+..+++..+. ..|++++.+++-.+.+++    +|...+.....+...   .   
T Consensus        67 ~~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~---~---  139 (212)
T PRK13942         67 IMCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTL---G---  139 (212)
T ss_pred             HHHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc---C---
Confidence            345667789999999998753 6777777777653 379999999887766543    454332211111000   0   


Q ss_pred             HHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEE
Q 017426          255 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  292 (372)
                      +.  ...+||.|+-............+.|+++|+++..
T Consensus       140 ~~--~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        140 YE--ENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             CC--cCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence            00  1368999976555455667788899999998774

>PRK05693 short chain dehydrogenase; Provisional

Probab=96.82  E-value=0.012  Score=53.02  Aligned_cols=79  Identities=22%  Similarity=0.257  Sum_probs=53.3

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCC-CcccHHHHHHHHHHHcCCcceEEEe
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .++||+|+ |.+|..+++.+...|+ .|+++++++++.+.+...+...+ ..|- +.+++.+.+..+.+ ..+++|++|+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~Dl~~~~~~~~~~~~~~~-~~~~id~vi~   78 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAV-QLDVNDGAALARLAEELEA-EHGGLDVLIN   78 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEE-EeeCCCHHHHHHHHHHHHH-hcCCCCEEEE
Confidence            37899998 9999999999999998 57778888777666655554332 2222 22334444444433 2357999999


Q ss_pred             CCCc
Q 017426          269 CAGL  272 (372)
Q Consensus       269 ~~g~  272 (372)
                      +.|.
T Consensus        79 ~ag~   82 (274)
T PRK05693         79 NAGY   82 (274)
T ss_pred             CCCC
Confidence            8873

>PRK08017 oxidoreductase; Provisional

Probab=96.82  E-value=0.013  Score=51.97  Aligned_cols=80  Identities=19%  Similarity=0.285  Sum_probs=53.3

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCc-ccHHHHHHHHHHHcCCcceEEEe
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      +++||+|+ |.+|..+++.+...|+ .|+++.+++++.+.+++.++..+ ..+-.+ .++.+.+........+.+|.++.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~   80 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGI-LLDLDDPESVERAADEVIALTDNRLYGLFN   80 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEE-EeecCCHHHHHHHHHHHHHhcCCCCeEEEE
Confidence            47999998 9999999999999998 57888888888777777775433 222221 22223333332212357899888


Q ss_pred             CCCc
Q 017426          269 CAGL  272 (372)
Q Consensus       269 ~~g~  272 (372)
                      +.|.
T Consensus        81 ~ag~   84 (256)
T PRK08017         81 NAGF   84 (256)
T ss_pred             CCCC
Confidence            7663

>PRK06182 short chain dehydrogenase; Validated

Probab=96.81  E-value=0.014  Score=52.44  Aligned_cols=81  Identities=21%  Similarity=0.212  Sum_probs=54.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCC-cccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .+.+++|+|+ |.+|..+++.+...|+ .|+++.+++++.+.+...+... +..|-. .+++.+.+.+..+ ..+++|++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~-~~~Dv~~~~~~~~~~~~~~~-~~~~id~l   78 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHP-LSLDVTDEASIKAAVDTIIA-EEGRIDVL   78 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeE-EEeeCCCHHHHHHHHHHHHH-hcCCCCEE
Confidence            3578999998 9999999999988998 5777778877766554445433 222322 2334444444433 24689999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      |++.|.
T Consensus        79 i~~ag~   84 (273)
T PRK06182         79 VNNAGY   84 (273)
T ss_pred             EECCCc
Confidence            998873

>TIGR00438 rrmJ cell division protein FtsJ

Probab=96.80  E-value=0.025  Score=47.93  Aligned_cols=101  Identities=20%  Similarity=0.279  Sum_probs=60.2

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcc
Q 017426          185 ANIGPETNVLIMGAGPIGLVTMLAARA-FGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       185 ~~~~~g~~vlI~Gag~~G~~ai~l~~~-~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      ..+++|++||..|+|.-+. +..+++. .+...+++++.++.+    ...++. ++..+....+..+.+++..  ...++
T Consensus        28 ~~i~~g~~VLDiG~GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~~~~i~-~~~~d~~~~~~~~~l~~~~--~~~~~   99 (188)
T TIGR00438        28 KLIKPGDTVLDLGAAPGGW-SQVAVEQVGGKGRVIAVDLQPMK----PIENVD-FIRGDFTDEEVLNKIRERV--GDDKV   99 (188)
T ss_pred             cccCCCCEEEEecCCCCHH-HHHHHHHhCCCceEEEEeccccc----cCCCce-EEEeeCCChhHHHHHHHHh--CCCCc
Confidence            5678999999999866444 3444444 344479999998864    112332 2222222222223333322  24579


Q ss_pred             eEEEe-CC----Cc------------HHHHHHHHHHhccCCEEEEEc
Q 017426          264 DVSFD-CA----GL------------NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       264 d~vid-~~----g~------------~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      |+|+. ..    |.            ...+..+.+.|+++|+++...
T Consensus       100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438       100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence            99995 21    21            246677899999999988753

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.77  E-value=0.037  Score=53.75  Aligned_cols=81  Identities=25%  Similarity=0.329  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh--hH-HHHHHHhCCCeEEecCCCccc-HHHHHHHHHHHcCCcc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD--YR-LSVAKEIGADNIVKVSTNLQD-IAEEVEKIQKAMGTGI  263 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~--~~-~~~~~~lg~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~  263 (372)
                      ++.++||+|+ |.+|..+++.+...|++ ++++++++  +. .+..++++... +..|-.+.+ ..+.+....+ ..+++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~-vi~~~~~~~~~~l~~~~~~~~~~~-~~~Dv~~~~~~~~~~~~~~~-~~g~i  285 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAH-VVCLDVPAAGEALAAVANRVGGTA-LALDITAPDAPARIAEHLAE-RHGGL  285 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCE-EEEEeCCccHHHHHHHHHHcCCeE-EEEeCCCHHHHHHHHHHHHH-hCCCC
Confidence            5788999988 99999999999999995 66665532  22 23334555433 222322222 2222333322 23579


Q ss_pred             eEEEeCCCc
Q 017426          264 DVSFDCAGL  272 (372)
Q Consensus       264 d~vid~~g~  272 (372)
                      |++|++.|.
T Consensus       286 d~vi~~AG~  294 (450)
T PRK08261        286 DIVVHNAGI  294 (450)
T ss_pred             CEEEECCCc
Confidence            999999873

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.75  E-value=0.016  Score=53.86  Aligned_cols=82  Identities=27%  Similarity=0.366  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH----HHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |++|.++++.+...|+ .|+.+.+++++.+.+    ++.|... ++..|-.+ ++..+.+.+..+ ..+
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g   83 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS-FGG   83 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH-hcC
Confidence            4678999998 9999999999999999 477777887765433    3345432 22222222 223333333322 236


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus        84 ~iD~lVnnAG~   94 (330)
T PRK06139         84 RIDVWVNNVGV   94 (330)
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.74  E-value=0.018  Score=51.19  Aligned_cols=81  Identities=25%  Similarity=0.336  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCCCeEEecCCCc-ccHHHHHHHHHHHcCCcceE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~  265 (372)
                      .|.++||+|+ |.+|.++++.+...|+ .|+++++++.+.+. .+.++.. .+..+-.+ ++..+.+.++.+ ..+++|+
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~-~~~~id~   82 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGL-FVPTDVTDEDAVNALFDTAAE-TYGSVDI   82 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc-EEEeeCCCHHHHHHHHHHHHH-HcCCCCE
Confidence            4789999998 9999999999999998 47777777765543 3445442 23223222 223333333322 2357999


Q ss_pred             EEeCCCc
Q 017426          266 SFDCAGL  272 (372)
Q Consensus       266 vid~~g~  272 (372)
                      +|.+.|.
T Consensus        83 vi~~ag~   89 (255)
T PRK06057         83 AFNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9998763

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.69  E-value=0.01  Score=45.41  Aligned_cols=93  Identities=29%  Similarity=0.370  Sum_probs=61.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEecChhHHHHHHHh----CC-CeEEecCCCcccHHHHHHHHHHHcCCc
Q 017426          189 PETNVLIMGAGPIGLVTMLAARA-FGAPRIVIVDVDDYRLSVAKEI----GA-DNIVKVSTNLQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~-~g~~~vv~v~~~~~~~~~~~~l----g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~  262 (372)
                      ||.+||-.|+|. |..++.+++. .++ .+++++.+++..+.+++.    +. +.+....   .++ ...    .....+
T Consensus         1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~---~d~-~~~----~~~~~~   70 (112)
T PF12847_consen    1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQ---GDA-EFD----PDFLEP   70 (112)
T ss_dssp             TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEE---SCC-HGG----TTTSSC
T ss_pred             CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE---Ccc-ccC----cccCCC
Confidence            688999999864 7888888885 566 799999999988877542    22 2222111   222 101    112467


Q ss_pred             ceEEEeCC-Cc---H------HHHHHHHHHhccCCEEEE
Q 017426          263 IDVSFDCA-GL---N------KTMSTALGATCAGGKVCL  291 (372)
Q Consensus       263 ~d~vid~~-g~---~------~~~~~~~~~l~~~G~~v~  291 (372)
                      ||+|+... ..   .      ..++.+.+.|+|+|+++.
T Consensus        71 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi  109 (112)
T PF12847_consen   71 FDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVI  109 (112)
T ss_dssp             EEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             CCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence            99999866 21   1      237788899999999875

...

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.69  E-value=0.021  Score=50.73  Aligned_cols=82  Identities=24%  Similarity=0.348  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-Hh---C-CCeEEecCCC-cccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EI---G-ADNIVKVSTN-LQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~l---g-~~~v~~~~~~-~~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |.+|..++..+...|+ .|+++.+++++.+.+. .+   + ...++..+-. .+++.+.+.+..+ ..+
T Consensus         8 ~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   85 (258)
T PRK06949          8 EGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET-EAG   85 (258)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH-hcC
Confidence            4789999987 9999999999999999 5788878777654332 22   2 1223333322 2334444444332 246


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus        86 ~~d~li~~ag~   96 (258)
T PRK06949         86 TIDILVNNSGV   96 (258)
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.69  E-value=0.021  Score=53.53  Aligned_cols=97  Identities=16%  Similarity=0.185  Sum_probs=63.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC--CCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          191 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG--ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .+|||+|+|.+|+.+++.+.+.|-..|.+++++.++...+....  .-..+.+|..+   .+.+.++.    .++|+||+
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d---~~al~~li----~~~d~VIn   74 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD---VDALVALI----KDFDLVIN   74 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC---hHHHHHHH----hcCCEEEE
Confidence            47999999999999999988888447899999988888776654  22222333322   22344443    35699999


Q ss_pred             CCCcHHHHHHHH-HHhccCCEEEEEcCC
Q 017426          269 CAGLNKTMSTAL-GATCAGGKVCLVGMG  295 (372)
Q Consensus       269 ~~g~~~~~~~~~-~~l~~~G~~v~~g~~  295 (372)
                      +.+..-.. ..+ .+++.+=.++..+..
T Consensus        75 ~~p~~~~~-~i~ka~i~~gv~yvDts~~  101 (389)
T COG1748          75 AAPPFVDL-TILKACIKTGVDYVDTSYY  101 (389)
T ss_pred             eCCchhhH-HHHHHHHHhCCCEEEcccC
Confidence            99875343 444 445544456655543

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.65  E-value=0.05  Score=46.08  Aligned_cols=105  Identities=16%  Similarity=0.186  Sum_probs=67.8

Q ss_pred             CCEEEEECC--CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-HhCCCeE-EecCCCcccHHHHHHHHHHHcCCcceE
Q 017426          190 ETNVLIMGA--GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       190 g~~vlI~Ga--g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~lg~~~v-~~~~~~~~~~~~~~~~~~~~~~~~~d~  265 (372)
                      ...|||.|+  |++|.++..-..+.|+ .|+++.++-++...+. ++|.... ++. +.+++..+...+......++.|+
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV-~~~~~V~~v~~evr~~~~Gkld~   84 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDV-SKPEEVVTVSGEVRANPDGKLDL   84 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEecc-CChHHHHHHHHHHhhCCCCceEE
Confidence            457999975  9999999988889999 6888888877776655 7774332 222 22233333333333334678999


Q ss_pred             EEeCCCcH----------HHHH--------------H--HHHHhccCCEEEEEcCCC
Q 017426          266 SFDCAGLN----------KTMS--------------T--ALGATCAGGKVCLVGMGH  296 (372)
Q Consensus       266 vid~~g~~----------~~~~--------------~--~~~~l~~~G~~v~~g~~~  296 (372)
                      .++..|.+          +..+              +  .....+..|+++.+|.-.
T Consensus        85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~  141 (289)
T KOG1209|consen   85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLA  141 (289)
T ss_pred             EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEeccee
Confidence            99977653          1111              1  233457789999887543

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.65  E-value=0.034  Score=46.60  Aligned_cols=91  Identities=19%  Similarity=0.257  Sum_probs=61.0

Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCC
Q 017426          193 VLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  271 (372)
Q Consensus       193 vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  271 (372)
                      |+|.|+ |.+|..+++.+...|. .|.+..+++++.+.  ..++. ++..+-  .+. +.+.+..    .++|.||.+.|
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~-~~~~d~--~d~-~~~~~al----~~~d~vi~~~~   69 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVE-IIQGDL--FDP-DSVKAAL----KGADAVIHAAG   69 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEE-EEESCT--TCH-HHHHHHH----TTSSEEEECCH
T ss_pred             eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccc-cceeee--hhh-hhhhhhh----hhcchhhhhhh
Confidence            789998 9999999999999997 57777788887766  33333 333332  222 3344332    48999999998


Q ss_pred             c----HHHHHHHHHHhccCC--EEEEEcC
Q 017426          272 L----NKTMSTALGATCAGG--KVCLVGM  294 (372)
Q Consensus       272 ~----~~~~~~~~~~l~~~G--~~v~~g~  294 (372)
                      .    .......++.++..|  +++.++.
T Consensus        70 ~~~~~~~~~~~~~~a~~~~~~~~~v~~s~   98 (183)
T PF13460_consen   70 PPPKDVDAAKNIIEAAKKAGVKRVVYLSS   98 (183)
T ss_dssp             STTTHHHHHHHHHHHHHHTTSSEEEEEEE
T ss_pred             hhcccccccccccccccccccccceeeec
Confidence            4    234556666665444  7777653

...

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.62  E-value=0.021  Score=50.22  Aligned_cols=78  Identities=24%  Similarity=0.359  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      ++.+++|+|+ |.+|..+++.+...|. .|+++++++++.+.+ +..+.. .+..+-.+.+   .+.+..+. .+++|++
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~---~v~~~~~~-~~~~d~v   81 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCE-PLRLDVGDDA---AIRAALAA-AGAFDGL   81 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCe-EEEecCCCHH---HHHHHHHH-hCCCCEE
Confidence            4679999998 9999999999999998 577777877666544 444543 3333332222   23332221 3579999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      |++.|.
T Consensus        82 i~~ag~   87 (245)
T PRK07060         82 VNCAGI   87 (245)
T ss_pred             EECCCC
Confidence            998874

>PRK08265 short chain dehydrogenase; Provisional

Probab=96.62  E-value=0.056  Score=48.25  Aligned_cols=82  Identities=23%  Similarity=0.276  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCCC-eEEecCCC-cccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~d  264 (372)
                      .+.++||+|+ +.+|.++++.+...|+ .|+.+++++++.+ ..+.++.. ..+..|-. .+++.+.+.+..+. .+.+|
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~id   82 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVAR-FGRVD   82 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence            3678999987 9999999999999999 5777778776544 34455532 12222322 22333444443332 35799


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|.+.|.
T Consensus        83 ~lv~~ag~   90 (261)
T PRK08265         83 ILVNLACT   90 (261)
T ss_pred             EEEECCCC
Confidence            99998763

>PRK12939 short chain dehydrogenase; Provisional

Probab=96.61  E-value=0.065  Score=47.20  Aligned_cols=82  Identities=16%  Similarity=0.143  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HH---hCCC-eEEecCCCcc-cHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTNLQ-DIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~v~~~~~~~~-~~~~~~~~~~~~~~~  261 (372)
                      ++.++||+|+ |.+|+.++..+...|+ .++++++++++.+.+ ++   .+.. .++..+-.+. +..+.+.+..+ ..+
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~   83 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAA-ALG   83 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-HcC
Confidence            4678999998 9999999999999998 467777776654432 22   2322 2222232222 22223333222 235


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|.+.|.
T Consensus        84 ~id~vi~~ag~   94 (250)
T PRK12939         84 GLDGLVNNAGI   94 (250)
T ss_pred             CCCEEEECCCC
Confidence            89999998875

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.60  E-value=0.035  Score=48.14  Aligned_cols=104  Identities=18%  Similarity=0.206  Sum_probs=66.5

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHH----HhCCCeEEecCCCcccHHHHHHH
Q 017426          180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       180 ~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~~~  254 (372)
                      .+++...++++++||-.|+|. |..++.+++..+. ..|++++.+++..+.++    ++|.+.+.....   +..+..  
T Consensus        68 ~~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~---d~~~~~--  141 (215)
T TIGR00080        68 MMTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG---DGTQGW--  141 (215)
T ss_pred             HHHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC---CcccCC--
Confidence            445667789999999998753 6666777776543 25899999988776554    345443322111   111111  


Q ss_pred             HHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEE
Q 017426          255 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  292 (372)
                       .  ...+||+|+-............+.|+++|+++..
T Consensus       142 -~--~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       142 -E--PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             -c--ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence             0  1357999885544444556788899999998864

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.57  E-value=0.0098  Score=53.49  Aligned_cols=100  Identities=22%  Similarity=0.372  Sum_probs=60.6

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHH
Q 017426          182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       182 l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      ++.+++++|++||-+|+| -|.+++.+++..|+ .|.+++.|++..+++++    .|....+.+..  .|+    +++  
T Consensus        55 ~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~--~D~----~~~--  124 (273)
T PF02353_consen   55 CEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL--QDY----RDL--  124 (273)
T ss_dssp             HTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE--S-G----GG---
T ss_pred             HHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--eec----ccc--
Confidence            466899999999999986 47778888888898 68899899988877653    45322111111  222    222  


Q ss_pred             HcCCcceEEEe-----CCCc---HHHHHHHHHHhccCCEEEEEc
Q 017426          258 AMGTGIDVSFD-----CAGL---NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       258 ~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~v~~g  293 (372)
                        ...||.|+.     .+|.   +..+..+.+.|+|+|+++.-.
T Consensus       125 --~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~  166 (273)
T PF02353_consen  125 --PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT  166 (273)
T ss_dssp             ----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred             --CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence              248898854     5553   245778889999999987654

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.56  E-value=0.028  Score=50.22  Aligned_cols=82  Identities=20%  Similarity=0.262  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCC-eEEecCCCccc-HHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTNLQD-IAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~v~~~~~~~~~-~~~~~~~~~~~~~~  261 (372)
                      ++.++||+|+ |.+|..+++.+...|+ .|+++++++++.+.+ +.+   +.. .++..+-.+++ ..+.+.+..+. .+
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   86 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA-FG   86 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            4779999987 9999999999999999 577777877665433 222   322 22223322222 33333333322 35


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus        87 ~id~vi~~Ag~   97 (263)
T PRK07814         87 RLDIVVNNVGG   97 (263)
T ss_pred             CCCEEEECCCC
Confidence            79999998773

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=96.56  E-value=0.038  Score=52.34  Aligned_cols=100  Identities=22%  Similarity=0.271  Sum_probs=69.1

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCc
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~  262 (372)
                      +..++++|++||-+|+| .|..+..+++..|. .|++++.+++..+.+++......+.+..  .++    ..+    .+.
T Consensus       161 ~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~--~D~----~~l----~~~  228 (383)
T PRK11705        161 RKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL--QDY----RDL----NGQ  228 (383)
T ss_pred             HHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE--Cch----hhc----CCC
Confidence            56788999999999985 47778888888888 6999999999998887643211111111  122    111    357


Q ss_pred             ceEEEe-----CCCc---HHHHHHHHHHhccCCEEEEEcC
Q 017426          263 IDVSFD-----CAGL---NKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       263 ~d~vid-----~~g~---~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      +|.|+.     .+|.   +..+..+.+.|+|+|.++....
T Consensus       229 fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~i  268 (383)
T PRK11705        229 FDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHTI  268 (383)
T ss_pred             CCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence            998864     2333   2456788889999999987653

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.51  E-value=0.037  Score=54.59  Aligned_cols=46  Identities=17%  Similarity=0.177  Sum_probs=37.2

Q ss_pred             HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH
Q 017426          183 RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV  229 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~  229 (372)
                      +..+.+.|.++||.|+ |.+|..+++.+...|++ |+++.++.++.+.
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~-Vval~Rn~ekl~~  119 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSAQRAES  119 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCe-EEEEeCCHHHHHH
Confidence            3466778999999998 99999999999889984 6677777776543

>PRK07109 short chain dehydrogenase; Provisional

Probab=96.51  E-value=0.1  Score=48.58  Aligned_cols=82  Identities=20%  Similarity=0.232  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH----HHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |.+|..+++.+...|+ .|+.+.+++++.+.+    +..|... .+..|-.+ ++..+.+....+ .-+
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~-~~g   84 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEE-ELG   84 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH-HCC
Confidence            4578999998 9999999999999999 577777877665432    2334332 22222222 223333333322 235


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus        85 ~iD~lInnAg~   95 (334)
T PRK07109         85 PIDTWVNNAMV   95 (334)
T ss_pred             CCCEEEECCCc
Confidence            79999998874

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.50  E-value=0.1  Score=44.79  Aligned_cols=106  Identities=14%  Similarity=0.081  Sum_probs=63.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChh-HHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY-RLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      .|.+|||.|+|.+|..-++.+...|+. |.+++.+.. ....+.+.|-...+.   .  ++...  .     -.++++||
T Consensus         8 ~gk~vlVvGgG~va~rk~~~Ll~~ga~-VtVvsp~~~~~l~~l~~~~~i~~~~---~--~~~~~--d-----l~~~~lVi   74 (205)
T TIGR01470         8 EGRAVLVVGGGDVALRKARLLLKAGAQ-LRVIAEELESELTLLAEQGGITWLA---R--CFDAD--I-----LEGAFLVI   74 (205)
T ss_pred             CCCeEEEECcCHHHHHHHHHHHHCCCE-EEEEcCCCCHHHHHHHHcCCEEEEe---C--CCCHH--H-----hCCcEEEE
Confidence            367999999999999999999999994 666644432 222233333211111   1  11110  1     15799999


Q ss_pred             eCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhh
Q 017426          268 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA  307 (372)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~  307 (372)
                      -+++.++.-.......+..|..+.........++......
T Consensus        75 ~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~f~~pa~~  114 (205)
T TIGR01470        75 AATDDEELNRRVAHAARARGVPVNVVDDPELCSFIFPSIV  114 (205)
T ss_pred             ECCCCHHHHHHHHHHHHHcCCEEEECCCcccCeEEEeeEE
Confidence            9999875555566666677877765444333344433333

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK05866 short chain dehydrogenase; Provisional

Probab=96.48  E-value=0.034  Score=50.71  Aligned_cols=82  Identities=23%  Similarity=0.283  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HH---hCCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |++|.++++.+...|+ .|++++++.++.+.+ +.   .+.. ..+..|-.+ ++..+.+..+.+ ..+
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~-~~g  116 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEK-RIG  116 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-HcC
Confidence            3578999987 9999999999888898 577777887665433 22   2322 222233222 233333333322 235


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus       117 ~id~li~~AG~  127 (293)
T PRK05866        117 GVDILINNAGR  127 (293)
T ss_pred             CCCEEEECCCC
Confidence            89999998874

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.47  E-value=0.044  Score=47.10  Aligned_cols=103  Identities=17%  Similarity=0.201  Sum_probs=66.0

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHH----HhCCCe-EEecCCCcccHHHHHHH
Q 017426          181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAK----EIGADN-IVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       181 ~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~----~lg~~~-v~~~~~~~~~~~~~~~~  254 (372)
                      +++...++++++||-.|+|. |..+..+++..+ ...|++++.+++-.+.++    ..+... +....   .|..+.+. 
T Consensus        64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~---~d~~~~~~-  138 (205)
T PRK13944         64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYH---GDGKRGLE-  138 (205)
T ss_pred             HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEE---CCcccCCc-
Confidence            44667788999999998753 677777777654 237999999988666554    345321 21111   11111110 


Q ss_pred             HHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEE
Q 017426          255 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  292 (372)
                          ...+||.|+-+...........+.|+++|+++..
T Consensus       139 ----~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        139 ----KHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             ----cCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence                1358999987655544556788999999998764

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.47  E-value=0.026  Score=50.67  Aligned_cols=81  Identities=27%  Similarity=0.263  Sum_probs=52.7

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCeEEecCCC-cccHHHHHHHHHHHcCCcceEE
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      +.++||+|+ |.+|..+++.+...|++ |+++++++++.+.+ +.++....+..|-. .+++.+.+.++.+ ..+++|++
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~l   82 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGAR-VAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEA-DLGPIDVL   82 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHH-HcCCCCEE
Confidence            568999998 99999999988889994 77777877765543 44552223333322 2333344444433 23689999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      |++.|.
T Consensus        83 i~~ag~   88 (273)
T PRK07825         83 VNNAGV   88 (273)
T ss_pred             EECCCc
Confidence            998874

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.43  E-value=0.025  Score=49.22  Aligned_cols=78  Identities=19%  Similarity=0.246  Sum_probs=50.3

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcc-cHHHHHHHHHHHcCCcceEEEe
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ-DIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .+++|+|+ |.+|..+++.+...|+ .|+++++++++.+.+++++-......+-.+. ++.+.+..+   ..+++|++|.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---~~~~id~vi~   77 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRL---QGQRFDLLFV   77 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHh---hcCCCCEEEE
Confidence            46899997 9999999988888998 5788888777665555554333333332222 222333332   1357999998


Q ss_pred             CCCc
Q 017426          269 CAGL  272 (372)
Q Consensus       269 ~~g~  272 (372)
                      +.|.
T Consensus        78 ~ag~   81 (225)
T PRK08177         78 NAGI   81 (225)
T ss_pred             cCcc
Confidence            7653

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=96.43  E-value=0.054  Score=48.44  Aligned_cols=103  Identities=21%  Similarity=0.352  Sum_probs=71.7

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCC-eEEecCCCcccHHHHHHHHHH
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD-NIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      +..+++||.++|=+|+|- |.+++-+|+..|. +|++++.|++..+.+++    .|.. .+-..   ..|    .+.+  
T Consensus        66 ~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~---l~d----~rd~--  134 (283)
T COG2230          66 EKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVR---LQD----YRDF--  134 (283)
T ss_pred             HhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEE---ecc----cccc--
Confidence            668999999999999865 7778888899998 69999999988776654    5544 22110   012    2222  


Q ss_pred             HcCCcceEEE-----eCCCc---HHHHHHHHHHhccCCEEEEEcCCCCC
Q 017426          258 AMGTGIDVSF-----DCAGL---NKTMSTALGATCAGGKVCLVGMGHHE  298 (372)
Q Consensus       258 ~~~~~~d~vi-----d~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~  298 (372)
                        .+.||-|+     +.+|.   ++-+..+.+.|+++|++.........
T Consensus       135 --~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~~~  181 (283)
T COG2230         135 --EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITGPD  181 (283)
T ss_pred             --ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecCCC
Confidence              24488775     34554   34567788899999999988765443

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.41  E-value=0.041  Score=49.13  Aligned_cols=82  Identities=22%  Similarity=0.267  Sum_probs=53.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-HhCCC-eEEecCCC-cccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~lg~~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~d  264 (372)
                      ++.++||+|+ +.+|..+++.+...|+ .|+.+++++++.+.+. +++.. ..+..+-. ..+..+.+.+..+. .+.+|
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id   82 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDA-FGKLD   82 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHh-cCCCC
Confidence            4678999987 9999999999999999 4777778877665543 34421 22222222 22344444444332 35799


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|++.|.
T Consensus        83 ~li~~ag~   90 (263)
T PRK06200         83 CFVGNAGI   90 (263)
T ss_pred             EEEECCCC
Confidence            99998773

>PRK00811 spermidine synthase; Provisional

Probab=96.39  E-value=0.066  Score=48.54  Aligned_cols=98  Identities=19%  Similarity=0.185  Sum_probs=63.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC------C--C-eEEecCCCcccHHHHHHHHHHH
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG------A--D-NIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg------~--~-~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      +..++||++|+|. |..+..+++..+...|.+++.+++-.+.+++.-      .  + .+-..   ..|..+.++.    
T Consensus        75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~---~~Da~~~l~~----  146 (283)
T PRK00811         75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELV---IGDGIKFVAE----  146 (283)
T ss_pred             CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEE---ECchHHHHhh----
Confidence            4567999998754 667777777777778999999999888887631      1  1 11111   1232222322    


Q ss_pred             cCCcceEEEeCCCc----------HHHHHHHHHHhccCCEEEEEc
Q 017426          259 MGTGIDVSFDCAGL----------NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       259 ~~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ..+.+|+||-....          .+.++.+.+.|+++|.++...
T Consensus       147 ~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~  191 (283)
T PRK00811        147 TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS  191 (283)
T ss_pred             CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence            35689999853211          234567888999999988753

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.39  E-value=0.096  Score=46.17  Aligned_cols=104  Identities=22%  Similarity=0.217  Sum_probs=59.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh-hHHH-HHH---HhCCC-eEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD-YRLS-VAK---EIGAD-NIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~-~~~~-~~~---~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ |.+|..++..+...|.+ |+++.+++ ++.+ +..   ..+.. ..+..|-.+ ++..+.+.++.+ ..
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~-V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~   82 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAH-VVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTARE-EF   82 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCE-EEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-hC
Confidence            3678999998 99999999999889985 66655543 3322 222   22322 122222222 223333333322 23


Q ss_pred             CcceEEEeCCCcH-------------------HHHHHHHHHhccCCEEEEEcC
Q 017426          261 TGIDVSFDCAGLN-------------------KTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       261 ~~~d~vid~~g~~-------------------~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      +++|++|.+.+..                   ..++.+...+..+|+++.++.
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS  135 (248)
T PRK07806         83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS  135 (248)
T ss_pred             CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence            5799998877542                   123344445555688887754

>PRK00536 speE spermidine synthase; Provisional

Probab=96.38  E-value=0.016  Score=51.57  Aligned_cols=101  Identities=10%  Similarity=-0.129  Sum_probs=66.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      +..++|||.|+|- |-++-.++|+-.  .|..++.+++-.++++++-...--.+++..-.+...+.   +...+.+|+||
T Consensus        71 ~~pk~VLIiGGGD-Gg~~REvLkh~~--~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~---~~~~~~fDVII  144 (262)
T PRK00536         71 KELKEVLIVDGFD-LELAHQLFKYDT--HVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLL---DLDIKKYDLII  144 (262)
T ss_pred             CCCCeEEEEcCCc-hHHHHHHHCcCC--eeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhh---hccCCcCCEEE
Confidence            4568999998654 556668888763  79999999999999888322110011222222221222   11236799987


Q ss_pred             -eCCCcHHHHHHHHHHhccCCEEEEEcC
Q 017426          268 -DCAGLNKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       268 -d~~g~~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                       |+.-.++-.+.+.+.|+++|.++.-+.
T Consensus       145 vDs~~~~~fy~~~~~~L~~~Gi~v~Qs~  172 (262)
T PRK00536        145 CLQEPDIHKIDGLKRMLKEDGVFISVAK  172 (262)
T ss_pred             EcCCCChHHHHHHHHhcCCCcEEEECCC
Confidence             656666677889999999999987643

>PRK07677 short chain dehydrogenase; Provisional

Probab=96.38  E-value=0.038  Score=48.96  Aligned_cols=81  Identities=27%  Similarity=0.273  Sum_probs=51.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-Hh---CC-CeEEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EI---GA-DNIVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~l---g~-~~v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      |.++||.|+ +.+|.++++.+...|+ .|+++++++++.+.+. .+   +. ...+..|-.+ +++.+.+.+..+. .++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEK-FGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-hCC
Confidence            468999987 9999999999999999 6788878776554332 22   21 1223233222 2333334443332 357


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|++|++.|.
T Consensus        79 id~lI~~ag~   88 (252)
T PRK07677         79 IDALINNAAG   88 (252)
T ss_pred             ccEEEECCCC
Confidence            9999998763

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.33  E-value=0.032  Score=50.16  Aligned_cols=115  Identities=16%  Similarity=0.073  Sum_probs=69.1

Q ss_pred             HHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-HhCCCeEEecCCCcccHHHHHHHHHH
Q 017426          179 VHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       179 ~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      +.+++......+.+++|.|+|+.+.+++.-+...|+..+.++.+++++.+.+. .++..    +       ...+     
T Consensus       111 ~~~L~~~~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----~-------~~~~-----  174 (272)
T PRK12550        111 AKLLASYQVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----W-------RPDL-----  174 (272)
T ss_pred             HHHHHhcCCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----c-------hhhc-----
Confidence            34555444455679999999999999999999999988999999988776553 44311    0       0001     


Q ss_pred             HcCCcceEEEeCCCcHHHH--------HHHHHHhccCCEEEEEcCCCCCccccchhhhccCcE
Q 017426          258 AMGTGIDVSFDCAGLNKTM--------STALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD  312 (372)
Q Consensus       258 ~~~~~~d~vid~~g~~~~~--------~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  312 (372)
                       ....+|+||+|+... ..        ......+.+...+..+-..+. .+..++..-.+...
T Consensus       175 -~~~~~dlvINaTp~G-m~~~~~~~~~pi~~~~l~~~~~v~D~vY~P~-~T~ll~~A~~~G~~  234 (272)
T PRK12550        175 -GGIEADILVNVTPIG-MAGGPEADKLAFPEAEIDAASVVFDVVALPA-ETPLIRYARARGKT  234 (272)
T ss_pred             -ccccCCEEEECCccc-cCCCCccccCCCCHHHcCCCCEEEEeecCCc-cCHHHHHHHHCcCe
Confidence             024589999997532 10        112234555555555543332 34444444444443

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=96.31  E-value=0.025  Score=46.56  Aligned_cols=81  Identities=22%  Similarity=0.282  Sum_probs=50.6

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecC--hhH-HHHHHH---hCCC-eEEecCC-CcccHHHHHHHHHHHcCCc
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD--DYR-LSVAKE---IGAD-NIVKVST-NLQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~--~~~-~~~~~~---lg~~-~v~~~~~-~~~~~~~~~~~~~~~~~~~  262 (372)
                      ++||+|+ +++|..+++.+...|..+++.+.++  .++ .++..+   .+.. .++..|- ..++....+.++. ...+.
T Consensus         2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~~   80 (167)
T PF00106_consen    2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVI-KRFGP   80 (167)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHH-HHHSS
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccccccccccccccc-ccccc
Confidence            6899987 9999998888888888788888887  333 333333   3421 1222222 2233444444443 23578


Q ss_pred             ceEEEeCCCcH
Q 017426          263 IDVSFDCAGLN  273 (372)
Q Consensus       263 ~d~vid~~g~~  273 (372)
                      +|++|.+.|..
T Consensus        81 ld~li~~ag~~   91 (167)
T PF00106_consen   81 LDILINNAGIF   91 (167)
T ss_dssp             ESEEEEECSCT
T ss_pred             ccccccccccc
Confidence            99999988764

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]

Probab=96.31  E-value=0.045  Score=49.28  Aligned_cols=105  Identities=17%  Similarity=0.202  Sum_probs=66.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeE-EecCCCcccHHHHHHHHHHHcCCcce
Q 017426          186 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI-VKVSTNLQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       186 ~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~~~~~~~~~~~~d  264 (372)
                      ..++ .+|||+|+|. |-.+=.++++...+++++|+.+++-.++++++-.... -..+..-+=..+...++.+....++|
T Consensus        74 h~~p-k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~~fD  151 (282)
T COG0421          74 HPNP-KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEEKFD  151 (282)
T ss_pred             CCCC-CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCCcCC
Confidence            3344 5999997543 5566678888888899999999999999988432111 00000000001112233333345899


Q ss_pred             EEE-eCCCc---------HHHHHHHHHHhccCCEEEEE
Q 017426          265 VSF-DCAGL---------NKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       265 ~vi-d~~g~---------~~~~~~~~~~l~~~G~~v~~  292 (372)
                      +|| |+...         ..-++.+.++|+++|.++..
T Consensus       152 vIi~D~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q  189 (282)
T COG0421         152 VIIVDSTDPVGPAEALFTEEFYEGCRRALKEDGIFVAQ  189 (282)
T ss_pred             EEEEcCCCCCCcccccCCHHHHHHHHHhcCCCcEEEEe
Confidence            997 54433         34577899999999999887

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.31  E-value=0.048  Score=48.35  Aligned_cols=82  Identities=22%  Similarity=0.256  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCe--EEecCCC-cccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN--IVKVSTN-LQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~--v~~~~~~-~~~~~~~~~~~~~~~~~~~d  264 (372)
                      .+.++||+|+ |.+|..+++.+...|+ .|+.+.++++..+...++....  .+..+-. .+++.+.+.++.+. .+++|
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~d   91 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISA-FGRID   91 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence            4679999998 9999999999988998 5778878776655555543221  2222322 22333333333332 35799


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|.+.|.
T Consensus        92 ~vi~~ag~   99 (255)
T PRK06841         92 ILVNSAGV   99 (255)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK06196 oxidoreductase; Provisional

Probab=96.30  E-value=0.036  Score=51.08  Aligned_cols=82  Identities=18%  Similarity=0.252  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCCCeEEecCCCc-ccHHHHHHHHHHHcCCcceE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~  265 (372)
                      .+.++||+|+ |.+|.+++..+...|+ .|+++.+++++.+. +..+.....+..|-.+ .+..+.+.++.+ ..+++|+
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~-~~~~iD~  102 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLD-SGRRIDI  102 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHh-cCCCCCE
Confidence            4678999998 9999999998888999 46777777766543 3333322223333222 223333333332 2367999


Q ss_pred             EEeCCCc
Q 017426          266 SFDCAGL  272 (372)
Q Consensus       266 vid~~g~  272 (372)
                      +|++.|.
T Consensus       103 li~nAg~  109 (315)
T PRK06196        103 LINNAGV  109 (315)
T ss_pred             EEECCCC
Confidence            9998873

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.30  E-value=0.082  Score=45.32  Aligned_cols=34  Identities=44%  Similarity=0.601  Sum_probs=30.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      ..+|+|.|+|++|..+++.+...|...+..++.+
T Consensus        21 ~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        21 NSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            5789999999999999999999999888888766

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.30  E-value=0.056  Score=47.68  Aligned_cols=81  Identities=16%  Similarity=0.261  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-H---HhCCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~---~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      ++.++||+|+ |.+|+.+++.+...|+ .|+.+++++++.+.+ +   ..+.. ..+..+-.+ .+..+.+..+.+ ..+
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   81 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAE-DFG   81 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-HcC
Confidence            4679999997 9999999999999998 577787877654432 2   23432 122333222 233333333322 135


Q ss_pred             cceEEEeCCC
Q 017426          262 GIDVSFDCAG  271 (372)
Q Consensus       262 ~~d~vid~~g  271 (372)
                      ++|.+|.+.|
T Consensus        82 ~id~vi~~ag   91 (253)
T PRK08217         82 QLNGLINNAG   91 (253)
T ss_pred             CCCEEEECCC
Confidence            7999999877

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.29  E-value=0.043  Score=44.67  Aligned_cols=103  Identities=24%  Similarity=0.281  Sum_probs=62.2

Q ss_pred             HHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCCCeE-EecCCCcccHHHHHHHHHH
Q 017426          181 ACRRANI-GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNI-VKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       181 ~l~~~~~-~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~~~v-~~~~~~~~~~~~~~~~~~~  257 (372)
                      +++...+ ..+.+++|.|+|.+|..+++.+...|...+.+++++.++.+ +++.++...+ ...    .+..    +.  
T Consensus         9 a~~~~~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~----~~~~----~~--   78 (155)
T cd01065           9 ALEEAGIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY----LDLE----EL--   78 (155)
T ss_pred             HHHhhCCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee----cchh----hc--
Confidence            3444433 45688999999999999999988887556888888877655 4556664310 111    1111    11  


Q ss_pred             HcCCcceEEEeCCCcHHH----HHHHHHHhccCCEEEEEcCC
Q 017426          258 AMGTGIDVSFDCAGLNKT----MSTALGATCAGGKVCLVGMG  295 (372)
Q Consensus       258 ~~~~~~d~vid~~g~~~~----~~~~~~~l~~~G~~v~~g~~  295 (372)
                        -.++|+|+.|++....    .......++++..++.++..
T Consensus        79 --~~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~  118 (155)
T cd01065          79 --LAEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYN  118 (155)
T ss_pred             --cccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence              2579999999876421    11112335555555555443

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.29  E-value=0.047  Score=48.71  Aligned_cols=82  Identities=17%  Similarity=0.234  Sum_probs=50.0

Q ss_pred             CCCEEEEECCC---HHHHHHHHHHHHcCCCeEEEEecChhHHH----HHHHhCCCeEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGAG---PIGLVTMLAARAFGAPRIVIVDVDDYRLS----VAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Gag---~~G~~ai~l~~~~g~~~vv~v~~~~~~~~----~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .|.++||+|++   ++|.++++.+...|++ |+.+.++++..+    ..++++....+..|-.+ ++..+.+.+..+ ..
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~~   86 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAE-LAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAE-EW   86 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCE-EEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHH-Hc
Confidence            46789999873   8999999999889995 666666654322    23334433333333222 333334444333 23


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +.+|+++++.|.
T Consensus        87 g~ld~lv~nAg~   98 (258)
T PRK07533         87 GRLDFLLHSIAF   98 (258)
T ss_pred             CCCCEEEEcCcc
Confidence            579999998763

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=96.29  E-value=0.057  Score=47.63  Aligned_cols=82  Identities=18%  Similarity=0.194  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChh--HHHHHHHhCCC-eEEecCCC-cccHHHHHHHHHHHcCCcc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY--RLSVAKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~--~~~~~~~lg~~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~  263 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+.+.+++.  ..+.+++++.. ..+..+-. .+++...+.+..+ ..+++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~~   81 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVE-EFGHI   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH-HcCCC
Confidence            4789999998 9999999999999999 5677766542  22333444432 22333322 2233333333332 23579


Q ss_pred             eEEEeCCCc
Q 017426          264 DVSFDCAGL  272 (372)
Q Consensus       264 d~vid~~g~  272 (372)
                      |++|++.|.
T Consensus        82 d~li~~ag~   90 (248)
T TIGR01832        82 DILVNNAGI   90 (248)
T ss_pred             CEEEECCCC
Confidence            999998764

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.28  E-value=0.048  Score=49.10  Aligned_cols=82  Identities=18%  Similarity=0.215  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCeEEEEecChhHHH----HHHHhCCCeEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-G--PIGLVTMLAARAFGAPRIVIVDVDDYRLS----VAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g--~~G~~ai~l~~~~g~~~vv~v~~~~~~~~----~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ +  ++|.++++.+...|++ |+.+.++++..+    +.+++|....+..|-.+ ++..+.+.+..+ ..
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~-V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~-~~   83 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAE-LAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEK-KW   83 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCE-EEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHH-Hh
Confidence            4678999998 4  8999999999999994 666666543222    22334533333333222 233344444333 23


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +.+|+++++.|.
T Consensus        84 g~iD~lVnnAG~   95 (271)
T PRK06505         84 GKLDFVVHAIGF   95 (271)
T ss_pred             CCCCEEEECCcc
Confidence            689999998873

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.26  E-value=0.019  Score=51.95  Aligned_cols=76  Identities=16%  Similarity=0.148  Sum_probs=51.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCe-EEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .+.++||+|+|+.+.+++.-+..+|++.+.++.++.+|.+.+ +.++... +.....    + +.+...    -..+|+|
T Consensus       124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~----~-~~~~~~----~~~~DiV  194 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEG----D-SGGLAI----EKAAEVL  194 (282)
T ss_pred             CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccc----h-hhhhhc----ccCCCEE
Confidence            578999999999999999999999998899999988876644 4444211 111110    0 111111    2569999


Q ss_pred             EeCCCcH
Q 017426          267 FDCAGLN  273 (372)
Q Consensus       267 id~~g~~  273 (372)
                      |+|++..
T Consensus       195 InaTp~g  201 (282)
T TIGR01809       195 VSTVPAD  201 (282)
T ss_pred             EECCCCC
Confidence            9998753

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.24  E-value=0.015  Score=48.30  Aligned_cols=99  Identities=18%  Similarity=0.269  Sum_probs=64.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEe-cCCC--------------cccHHHHHHH
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK-VSTN--------------LQDIAEEVEK  254 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~-~~~~--------------~~~~~~~~~~  254 (372)
                      ..+|+|+|+|.+|+.|+++++.+|+ .+++.+..+++.+..+.++...+.. +...              .......+.+
T Consensus        20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~   98 (168)
T PF01262_consen   20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE   98 (168)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred             CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence            4789999999999999999999999 5888888888888888888755433 1110              1233334444


Q ss_pred             HHHHcCCcceEEEeCC---Cc--HH-HHHHHHHHhccCCEEEEEc
Q 017426          255 IQKAMGTGIDVSFDCA---GL--NK-TMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~---g~--~~-~~~~~~~~l~~~G~~v~~g  293 (372)
                      ..    ..+|++|.+.   +.  +. .-+..++.|+++..++.++
T Consensus        99 ~i----~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis  139 (168)
T PF01262_consen   99 FI----APADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDIS  139 (168)
T ss_dssp             HH----HH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETT
T ss_pred             HH----hhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEE
Confidence            33    3678888532   11  11 1235677788877777775

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK06180 short chain dehydrogenase; Provisional

Probab=96.24  E-value=0.054  Score=48.81  Aligned_cols=81  Identities=22%  Similarity=0.132  Sum_probs=51.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCC--eEEecCCCc-ccHHHHHHHHHHHcCCcceE
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD--NIVKVSTNL-QDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~--~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~  265 (372)
                      +.++||+|+ |.+|.++++.+...|+ .|+++.+++++.+.+.+....  ..+..+-.+ +...+.+....+ ..+++|+
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~~~d~   81 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEA-TFGPIDV   81 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHH-HhCCCCE
Confidence            568999998 9999999999988998 577888888776655443221  122222222 223333333322 1357999


Q ss_pred             EEeCCCc
Q 017426          266 SFDCAGL  272 (372)
Q Consensus       266 vid~~g~  272 (372)
                      ++++.|.
T Consensus        82 vv~~ag~   88 (277)
T PRK06180         82 LVNNAGY   88 (277)
T ss_pred             EEECCCc
Confidence            9998875

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.24  E-value=0.051  Score=48.17  Aligned_cols=82  Identities=27%  Similarity=0.302  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~v~~~~~~-~~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ +.+|.++++.+...|+ .|+.+.+++++.+.+ +++   +.. ..+..|-. .++..+.+.++.+. .+
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g   85 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE-LG   85 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence            4678999998 9999999999999999 577777777655433 222   321 12222222 23333444443332 35


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|+++.+.|.
T Consensus        86 ~id~lv~~ag~   96 (253)
T PRK05867         86 GIDIAVCNAGI   96 (253)
T ss_pred             CCCEEEECCCC
Confidence            79999998763

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.23  E-value=0.089  Score=48.74  Aligned_cols=99  Identities=14%  Similarity=0.115  Sum_probs=65.2

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEEecChhHHHH-HHHh----CCCeEEecCCCcccHHHHHHHHH
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAA-RAFGAPRIVIVDVDDYRLSV-AKEI----GADNIVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~-~~~g~~~vv~v~~~~~~~~~-~~~l----g~~~v~~~~~~~~~~~~~~~~~~  256 (372)
                      +...-+...+++|+|+|..|.+.+..+ ...+++.|.+.++++++.+. ++.+    +.. +..+    .++.+.+    
T Consensus       120 ~~la~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~----~~~~~~~----  190 (325)
T PRK08618        120 KYLAREDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVV----NSADEAI----  190 (325)
T ss_pred             HHhcCCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEe----CCHHHHH----
Confidence            443334567899999999998776544 45788899999999887653 3433    332 2222    2222222    


Q ss_pred             HHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCC
Q 017426          257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH  296 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  296 (372)
                          ...|+|+.|+++... ... ..++++-+++.+|...
T Consensus       191 ----~~aDiVi~aT~s~~p-~i~-~~l~~G~hV~~iGs~~  224 (325)
T PRK08618        191 ----EEADIIVTVTNAKTP-VFS-EKLKKGVHINAVGSFM  224 (325)
T ss_pred             ----hcCCEEEEccCCCCc-chH-HhcCCCcEEEecCCCC
Confidence                468999999987633 334 8888888888887543

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.23  E-value=0.011  Score=49.63  Aligned_cols=89  Identities=21%  Similarity=0.213  Sum_probs=59.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      -.|.+|.|+|.|.+|+.+++.++.+|+ .|++.+++.+..+.....+...        .+    +.++.    ...|+|+
T Consensus        34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~--------~~----l~ell----~~aDiv~   96 (178)
T PF02826_consen   34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY--------VS----LDELL----AQADIVS   96 (178)
T ss_dssp             STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE--------SS----HHHHH----HH-SEEE
T ss_pred             cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee--------ee----hhhhc----chhhhhh
Confidence            368999999999999999999999999 6888888887766455555421        12    22232    3578998


Q ss_pred             eCCCcHHH-----HHHHHHHhccCCEEEEEc
Q 017426          268 DCAGLNKT-----MSTALGATCAGGKVCLVG  293 (372)
Q Consensus       268 d~~g~~~~-----~~~~~~~l~~~G~~v~~g  293 (372)
                      .+......     -...+..|+++..++.++
T Consensus        97 ~~~plt~~T~~li~~~~l~~mk~ga~lvN~a  127 (178)
T PF02826_consen   97 LHLPLTPETRGLINAEFLAKMKPGAVLVNVA  127 (178)
T ss_dssp             E-SSSSTTTTTSBSHHHHHTSTTTEEEEESS
T ss_pred             hhhccccccceeeeeeeeeccccceEEEecc
Confidence            87664211     124677788777776654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.22  E-value=0.12  Score=42.27  Aligned_cols=88  Identities=13%  Similarity=0.104  Sum_probs=53.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .|.+|||.|+|.+|..-++.+...|++ |.+++  ++..+.+.+++......     ..+.       +..-.++|+||-
T Consensus        12 ~~~~vlVvGGG~va~rka~~Ll~~ga~-V~VIs--p~~~~~l~~l~~i~~~~-----~~~~-------~~dl~~a~lVia   76 (157)
T PRK06719         12 HNKVVVIIGGGKIAYRKASGLKDTGAF-VTVVS--PEICKEMKELPYITWKQ-----KTFS-------NDDIKDAHLIYA   76 (157)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEc--CccCHHHHhccCcEEEe-----cccC-------hhcCCCceEEEE
Confidence            478999999999999999988889995 55552  44333444454222211     1111       111357999999


Q ss_pred             CCCcHHHHHHHHHHhccCCEEEEE
Q 017426          269 CAGLNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~G~~v~~  292 (372)
                      +++.+ ..+..+..++..+.++..
T Consensus        77 aT~d~-e~N~~i~~~a~~~~~vn~   99 (157)
T PRK06719         77 ATNQH-AVNMMVKQAAHDFQWVNV   99 (157)
T ss_pred             CCCCH-HHHHHHHHHHHHCCcEEE
Confidence            99876 556555555444434433

>PRK06484 short chain dehydrogenase; Validated

Probab=96.22  E-value=0.12  Score=51.24  Aligned_cols=83  Identities=23%  Similarity=0.265  Sum_probs=54.2

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-HhCCCe-EEecCCCc-ccHHHHHHHHHHHcCCcc
Q 017426          188 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       188 ~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~~  263 (372)
                      ..|.++||+|+ +++|.++++.+...|+ .|+.+++++++.+.+. .++... .+..|-.+ ++..+.+.+..+ ..+++
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~g~i  344 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQA-RWGRL  344 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHH-HcCCC
Confidence            35778999987 9999999999999998 5777878777665543 455332 22223222 233334444333 23679


Q ss_pred             eEEEeCCCc
Q 017426          264 DVSFDCAGL  272 (372)
Q Consensus       264 d~vid~~g~  272 (372)
                      |++|.+.|.
T Consensus       345 d~li~nAg~  353 (520)
T PRK06484        345 DVLVNNAGI  353 (520)
T ss_pred             CEEEECCCC
Confidence            999998774

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.22  E-value=0.045  Score=52.27  Aligned_cols=75  Identities=16%  Similarity=0.243  Sum_probs=54.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      -.+.++||.|+|.+|.+++..+...|+..++++.++.++.+ ++.+++...++.+       . .+.+.    -..+|+|
T Consensus       179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~-------~-~l~~~----l~~aDiV  246 (414)
T PRK13940        179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL-------S-ELPQL----IKKADII  246 (414)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH-------H-HHHHH----hccCCEE
Confidence            35789999999999999999999999888999988877755 4455652222221       1 12222    1579999


Q ss_pred             EeCCCcHH
Q 017426          267 FDCAGLNK  274 (372)
Q Consensus       267 id~~g~~~  274 (372)
                      |+|++.+.
T Consensus       247 I~aT~a~~  254 (414)
T PRK13940        247 IAAVNVLE  254 (414)
T ss_pred             EECcCCCC
Confidence            99999864

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.21  E-value=0.048  Score=47.64  Aligned_cols=81  Identities=20%  Similarity=0.181  Sum_probs=49.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHH---hCCCeEEecCC-CcccHHHHHHHHHHHcCCc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKE---IGADNIVKVST-NLQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~---lg~~~v~~~~~-~~~~~~~~~~~~~~~~~~~  262 (372)
                      ++.++||+|+ |.+|..+++.+...|++ |+.+++++++.. .++.   .+... +..+- +.+++.+.+.+..+ .-++
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~~~~-~~~~   82 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGAR-VALIGRGAAPLSQTLPGVPADALRI-GGIDLVDPQAARRAVDEVNR-QFGR   82 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCe-EEEEeCChHhHHHHHHHHhhcCceE-EEeecCCHHHHHHHHHHHHH-HhCC
Confidence            3679999998 99999999999888995 777777665432 2222   23322 22222 12333333333332 2358


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|++|.+.|.
T Consensus        83 ~d~vi~~ag~   92 (239)
T PRK12828         83 LDALVNIAGA   92 (239)
T ss_pred             cCEEEECCcc
Confidence            9999998763

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.21  E-value=0.044  Score=50.03  Aligned_cols=82  Identities=28%  Similarity=0.431  Sum_probs=53.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCCC-eEEe--cCCC-cccHHHHHHHHHHHcCCc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGAD-NIVK--VSTN-LQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~~-~v~~--~~~~-~~~~~~~~~~~~~~~~~~  262 (372)
                      .|.++||+|+ |++|.++++.+...|+ .|+++.+++++.+. .+.++.. .+..  .|-. ..+..+.+.++.+. .++
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~   85 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVER-FGG   85 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHH-cCC
Confidence            4789999998 9999999999999999 57777787776553 4555521 1111  2222 22333344443332 357


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|++|++.|.
T Consensus        86 id~vI~nAG~   95 (296)
T PRK05872         86 IDVVVANAGI   95 (296)
T ss_pred             CCEEEECCCc
Confidence            9999998874

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.20  E-value=0.053  Score=48.13  Aligned_cols=82  Identities=22%  Similarity=0.215  Sum_probs=49.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCC-cccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .+.++||+|+ |.+|.++++.+...|+++++...++++..+.++..+.. .+..|-. ..+..+.+.++.+ ..+++|++
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~-~~~~Dl~~~~~~~~~~~~~~~-~~~~id~l   83 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVF-TIKCDVGNRDQVKKSKEVVEK-EFGRVDVL   83 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCe-EEEecCCCHHHHHHHHHHHHH-HcCCCCEE
Confidence            3678999987 99999999999889995433334444444444443432 2222322 2333344444332 23579999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      |.+.|.
T Consensus        84 i~~ag~   89 (255)
T PRK06463         84 VNNAGI   89 (255)
T ss_pred             EECCCc
Confidence            998764

>PRK07062 short chain dehydrogenase; Provisional

Probab=96.20  E-value=0.053  Score=48.45  Aligned_cols=82  Identities=22%  Similarity=0.291  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh----CCCeE--EecCCCc-ccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GADNI--VKVSTNL-QDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~v--~~~~~~~-~~~~~~~~~~~~~~  259 (372)
                      .+.++||+|+ +.+|.++++.+...|++ |+.+.+++++.+.+ +++    +...+  +..|-.+ ++..+.+.++.+ .
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~   84 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGAS-VAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA-R   84 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH-h
Confidence            4678999998 99999999999999994 77777877665432 222    11122  2222222 223333333332 2


Q ss_pred             CCcceEEEeCCCc
Q 017426          260 GTGIDVSFDCAGL  272 (372)
Q Consensus       260 ~~~~d~vid~~g~  272 (372)
                      .+++|++|++.|.
T Consensus        85 ~g~id~li~~Ag~   97 (265)
T PRK07062         85 FGGVDMLVNNAGQ   97 (265)
T ss_pred             cCCCCEEEECCCC
Confidence            3579999998874

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.19  E-value=0.046  Score=48.70  Aligned_cols=83  Identities=19%  Similarity=0.232  Sum_probs=52.6

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH-hCCC--eEEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          188 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGAD--NIVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       188 ~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~-lg~~--~v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      -++.++||+|+ |.+|..+++.+...|.+ |+.+.++++..+.+.+ ..-.  ..+..+-.+ .++.+.+.+..+. -++
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   86 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGAR-VHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVER-FGG   86 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH-hCC
Confidence            46789999998 99999999999999994 7777777665554433 3222  222223222 2233333333222 357


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|+||.+.|.
T Consensus        87 ~d~vi~~ag~   96 (264)
T PRK12829         87 LDVLVNNAGI   96 (264)
T ss_pred             CCEEEECCCC
Confidence            9999998774

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.18  E-value=0.06  Score=48.02  Aligned_cols=83  Identities=28%  Similarity=0.350  Sum_probs=51.9

Q ss_pred             CCCCEEEEECC-C-HHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-H----hCCCeE--EecCCCcc-cHHHHHHHHHH
Q 017426          188 GPETNVLIMGA-G-PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-E----IGADNI--VKVSTNLQ-DIAEEVEKIQK  257 (372)
Q Consensus       188 ~~g~~vlI~Ga-g-~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~----lg~~~v--~~~~~~~~-~~~~~~~~~~~  257 (372)
                      ..+.++||+|+ | ++|.++++.+...|++ |+++++++++.+... .    ++...+  +..|-.+. +....+.+..+
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGAR-VVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            45789999987 6 7999999999999994 777777776544332 1    343222  22222222 23333333332


Q ss_pred             HcCCcceEEEeCCCc
Q 017426          258 AMGTGIDVSFDCAGL  272 (372)
Q Consensus       258 ~~~~~~d~vid~~g~  272 (372)
                      . .+++|++|++.|.
T Consensus        94 ~-~g~id~li~~ag~  107 (262)
T PRK07831         94 R-LGRLDVLVNNAGL  107 (262)
T ss_pred             H-cCCCCEEEECCCC
Confidence            2 3579999999874

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.16  E-value=0.062  Score=48.01  Aligned_cols=81  Identities=17%  Similarity=0.206  Sum_probs=48.4

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCeEEEEecChhHHHHHH----HhCCCeEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-G--PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g--~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~----~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .|..+||+|+ +  ++|.++++.+...|++ |+.+.++++..+.++    +++....+..|-.+ ++..+.+.+..+. .
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~-v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~-~   84 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAE-LWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEK-W   84 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCE-EEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHH-c
Confidence            4678899987 4  7999999888889994 666666643222232    33433333333222 2333344443332 3


Q ss_pred             CcceEEEeCCC
Q 017426          261 TGIDVSFDCAG  271 (372)
Q Consensus       261 ~~~d~vid~~g  271 (372)
                      +.+|+++++.|
T Consensus        85 g~iDilVnnag   95 (260)
T PRK06603         85 GSFDFLLHGMA   95 (260)
T ss_pred             CCccEEEEccc
Confidence            57999999876

>PRK08589 short chain dehydrogenase; Validated

Probab=96.16  E-value=0.063  Score=48.28  Aligned_cols=82  Identities=24%  Similarity=0.343  Sum_probs=50.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh---CCC-eEEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l---g~~-~v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      .+.++||+|+ +.+|.++++.+...|+ .|+++.++++..+.++++   +.. ..+..|-.+ .+..+.+.++.+. .++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~   82 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQ-FGR   82 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHH-cCC
Confidence            4678999998 9999999998888999 577777774433444443   321 122222222 2333344444332 357


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|++|++.|.
T Consensus        83 id~li~~Ag~   92 (272)
T PRK08589         83 VDVLFNNAGV   92 (272)
T ss_pred             cCEEEECCCC
Confidence            9999998764

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=96.15  E-value=0.026  Score=50.54  Aligned_cols=97  Identities=18%  Similarity=0.263  Sum_probs=70.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      +..+|.|+|+|.+|.-++.+|.-+|+ .|...+.+.+|...++.+-...+..+..+...+.+.+        .+.|++|.
T Consensus       167 ~~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v--------~~aDlvIg  237 (371)
T COG0686         167 LPAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAV--------KKADLVIG  237 (371)
T ss_pred             CCccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHh--------hhccEEEE
Confidence            44578888999999999999999999 5888899999999887754433333323333333322        47899998


Q ss_pred             CCCcH------HHHHHHHHHhccCCEEEEEcC
Q 017426          269 CAGLN------KTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       269 ~~g~~------~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      ++=-+      ...+..++.|+|++.++.+..
T Consensus       238 aVLIpgakaPkLvt~e~vk~MkpGsVivDVAi  269 (371)
T COG0686         238 AVLIPGAKAPKLVTREMVKQMKPGSVIVDVAI  269 (371)
T ss_pred             EEEecCCCCceehhHHHHHhcCCCcEEEEEEE
Confidence            64211      246678999999999998864

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.14  E-value=0.062  Score=47.97  Aligned_cols=81  Identities=26%  Similarity=0.233  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH-hCCC-eEEecCCC-cccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~-lg~~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~d  264 (372)
                      .+.++||.|+ |.+|.++++.+...|+ .|+++++++++.+.+.+ .+.. ..+..+-. ..+..+.+.++.+. .+++|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id   81 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAA-FGKID   81 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHH-hCCCC
Confidence            4678999987 9999999999999999 57777787766655543 2321 11222221 12233444444332 35799


Q ss_pred             EEEeCCC
Q 017426          265 VSFDCAG  271 (372)
Q Consensus       265 ~vid~~g  271 (372)
                      ++|++.|
T Consensus        82 ~li~~Ag   88 (262)
T TIGR03325        82 CLIPNAG   88 (262)
T ss_pred             EEEECCC
Confidence            9999876

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=96.14  E-value=0.05  Score=48.59  Aligned_cols=131  Identities=15%  Similarity=0.233  Sum_probs=87.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCC---------CcccHHHHHHHHHHH
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST---------NLQDIAEEVEKIQKA  258 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~---------~~~~~~~~~~~~~~~  258 (372)
                      .++.++|+.|+|..|+.++..++..|+ .|..-+....+.+..+.+|+...-.-++         -+++|...-.++...
T Consensus       162 v~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a~  240 (356)
T COG3288         162 VSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVAE  240 (356)
T ss_pred             ccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHHH
Confidence            467889999999999999999999999 6666677777888888888654322111         123444333333332


Q ss_pred             cCCcceEEEeCCCcH------HHHHHHHHHhccCCEEEEEcCC-CCCccc--cchhhhccCcEEEeeccC
Q 017426          259 MGTGIDVSFDCAGLN------KTMSTALGATCAGGKVCLVGMG-HHEMTV--PLTPAAVREVDVVGVFRY  319 (372)
Q Consensus       259 ~~~~~d~vid~~g~~------~~~~~~~~~l~~~G~~v~~g~~-~~~~~~--~~~~~~~~~~~i~~~~~~  319 (372)
                      .-.++|+||-+.--|      .....++..|+|++.++.+... .++...  +-.-.....+++.|..+.
T Consensus       241 ~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nl  310 (356)
T COG3288         241 QAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNL  310 (356)
T ss_pred             HhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCc
Confidence            356899999875322      2345788999999999998632 222221  224456677888887654

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.13  E-value=0.17  Score=43.37  Aligned_cols=104  Identities=13%  Similarity=0.167  Sum_probs=58.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh-hH-HHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD-YR-LSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~-~~-~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .|.+|||.|+|.+|...+..+...|++ |.+++... +. .+++.. +.  + .+..  ..+...       .-.++|+|
T Consensus         9 ~~k~vLVIGgG~va~~ka~~Ll~~ga~-V~VIs~~~~~~l~~l~~~-~~--i-~~~~--~~~~~~-------~l~~adlV   74 (202)
T PRK06718          9 SNKRVVIVGGGKVAGRRAITLLKYGAH-IVVISPELTENLVKLVEE-GK--I-RWKQ--KEFEPS-------DIVDAFLV   74 (202)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCe-EEEEcCCCCHHHHHHHhC-CC--E-EEEe--cCCChh-------hcCCceEE
Confidence            467999999999999999988889984 66664432 11 122222 21  1 1111  111100       12579999


Q ss_pred             EeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhh
Q 017426          267 FDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA  307 (372)
Q Consensus       267 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~  307 (372)
                      |-+++.+ .++..+...+..+.++.....+...++-.....
T Consensus        75 iaaT~d~-elN~~i~~~a~~~~lvn~~d~~~~~~f~~Pa~~  114 (202)
T PRK06718         75 IAATNDP-RVNEQVKEDLPENALFNVITDAESGNVVFPSAL  114 (202)
T ss_pred             EEcCCCH-HHHHHHHHHHHhCCcEEECCCCccCeEEEeeEE
Confidence            9999986 445444444444556655444443444444433

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.13  E-value=0.064  Score=47.28  Aligned_cols=82  Identities=21%  Similarity=0.184  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhC--C-CeEEecCCC-cccHHHHHHHHHHHcCCc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIG--A-DNIVKVSTN-LQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg--~-~~v~~~~~~-~~~~~~~~~~~~~~~~~~  262 (372)
                      .+.++||+|+ |.+|..+++.+...|.+ |+++++++++.+.+ ..+.  . ...+..+-. ..++...+.+... ..++
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~   81 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGAR-VVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALE-RFGS   81 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-HhCC
Confidence            3568999998 99999999998889995 78888887665443 3332  1 112222222 2333334443322 2357


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|++|.+.|.
T Consensus        82 ~d~vi~~ag~   91 (251)
T PRK07231         82 VDILVNNAGT   91 (251)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>PRK12937 short chain dehydrogenase; Provisional

Probab=96.11  E-value=0.16  Score=44.57  Aligned_cols=83  Identities=18%  Similarity=0.147  Sum_probs=47.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-H---HHHhCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-V---AKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~---~~~lg~~-~v~~~~~~-~~~~~~~~~~~~~~~~~  261 (372)
                      ++.++||+|+ |.+|..+++.+...|+++++...+++++.+ .   ++..+.. ..+..+-. ..+..+.+.+..+. .+
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   82 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA-FG   82 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            4678999987 999999999999999954443333333222 2   2223322 12222222 22333334433322 35


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|.+.|.
T Consensus        83 ~id~vi~~ag~   93 (245)
T PRK12937         83 RIDVLVNNAGV   93 (245)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>PRK09072 short chain dehydrogenase; Provisional

Probab=96.09  E-value=0.077  Score=47.35  Aligned_cols=81  Identities=25%  Similarity=0.348  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-Hh--CC-CeEEecCCCcc-cHHHHHHHHHHHcCCc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EI--GA-DNIVKVSTNLQ-DIAEEVEKIQKAMGTG  262 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~l--g~-~~v~~~~~~~~-~~~~~~~~~~~~~~~~  262 (372)
                      ++.++||+|+ |.+|..+++.+...|+ .|+++++++++.+.+. ++  +. ...+..|-.+. +..+.+....+  .++
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~--~~~   80 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE--MGG   80 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh--cCC
Confidence            3678999987 9999999999989998 4777778877655443 32  21 11222222222 22222222222  367


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|+++.+.|.
T Consensus        81 id~lv~~ag~   90 (263)
T PRK09072         81 INVLINNAGV   90 (263)
T ss_pred             CCEEEECCCC
Confidence            9999998775

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.07  E-value=0.083  Score=48.52  Aligned_cols=90  Identities=27%  Similarity=0.307  Sum_probs=59.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          191 TNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      .+|.|+|+|.+|.+.+..++..|. ..|++.++++++.+.+++.|......     .+..+    .    -...|+||.|
T Consensus         7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-----~~~~~----~----~~~aDvViia   73 (307)
T PRK07502          7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-----TSAAE----A----VKGADLVILC   73 (307)
T ss_pred             cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-----CCHHH----H----hcCCCEEEEC
Confidence            579999999999999999888885 36888899998888888877532111     11111    1    1468999998


Q ss_pred             CCcHHH---HHHHHHHhccCCEEEEEc
Q 017426          270 AGLNKT---MSTALGATCAGGKVCLVG  293 (372)
Q Consensus       270 ~g~~~~---~~~~~~~l~~~G~~v~~g  293 (372)
                      +.....   +......++++..++.++
T Consensus        74 vp~~~~~~v~~~l~~~l~~~~iv~dvg  100 (307)
T PRK07502         74 VPVGASGAVAAEIAPHLKPGAIVTDVG  100 (307)
T ss_pred             CCHHHHHHHHHHHHhhCCCCCEEEeCc
Confidence            886422   222334455666555554

>PRK06128 oxidoreductase; Provisional

Probab=96.06  E-value=0.16  Score=46.47  Aligned_cols=82  Identities=23%  Similarity=0.229  Sum_probs=48.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChh--H----HHHHHHhCCCe-EEecCCCc-ccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY--R----LSVAKEIGADN-IVKVSTNL-QDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~--~----~~~~~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~  259 (372)
                      .+.++||+|+ |.+|.+++..+...|++ |+.+.++.+  +    .+.++..+... .+..|-.+ .+..+.+.+..+. 
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~-V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-  131 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGAD-IALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE-  131 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCE-EEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH-
Confidence            4679999987 99999999999999995 555544322  1    22233344322 22222222 2233333333322 


Q ss_pred             CCcceEEEeCCCc
Q 017426          260 GTGIDVSFDCAGL  272 (372)
Q Consensus       260 ~~~~d~vid~~g~  272 (372)
                      .+++|++|.+.|.
T Consensus       132 ~g~iD~lV~nAg~  144 (300)
T PRK06128        132 LGGLDILVNIAGK  144 (300)
T ss_pred             hCCCCEEEECCcc
Confidence            3579999998773

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.05  E-value=0.051  Score=51.69  Aligned_cols=92  Identities=23%  Similarity=0.317  Sum_probs=55.5

Q ss_pred             EEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHHH--hCC-CeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          193 VLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKE--IGA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       193 vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~~--lg~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      |+|+|+|.+|..+++++...+- ..+++++++.++.+.+.+  .+. ......+-  .+.. .+.++.    .+.|+||+
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~--~~~~-~l~~~~----~~~dvVin   73 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDV--NDPE-SLAELL----RGCDVVIN   73 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--T--TTHH-HHHHHH----TTSSEEEE
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEec--CCHH-HHHHHH----hcCCEEEE
Confidence            6889999999999999987763 378899999998776543  222 12222222  2222 255554    46799999


Q ss_pred             CCCcHHHHHHHHHHhccCCEEEE
Q 017426          269 CAGLNKTMSTALGATCAGGKVCL  291 (372)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~G~~v~  291 (372)
                      |+|.......+-.++..+-.++.
T Consensus        74 ~~gp~~~~~v~~~~i~~g~~yvD   96 (386)
T PF03435_consen   74 CAGPFFGEPVARACIEAGVHYVD   96 (386)
T ss_dssp             -SSGGGHHHHHHHHHHHT-EEEE
T ss_pred             CCccchhHHHHHHHHHhCCCeec
Confidence            99965343444445566666766

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.04  E-value=0.098  Score=48.23  Aligned_cols=94  Identities=18%  Similarity=0.191  Sum_probs=58.0

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCC
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  270 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  270 (372)
                      +|||+|+ |.+|..+++.+...|.+ |.++.++.++...+...++..+ ..+-.  + .+.+.+..    .++|+||+++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~-V~~l~R~~~~~~~l~~~~v~~v-~~Dl~--d-~~~l~~al----~g~d~Vi~~~   72 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQ-VRCLVRNLRKASFLKEWGAELV-YGDLS--L-PETLPPSF----KGVTAIIDAS   72 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCe-EEEEEcChHHhhhHhhcCCEEE-ECCCC--C-HHHHHHHH----CCCCEEEECC
Confidence            6999998 99999999999889984 7777777666555555555433 22211  1 12233332    4689999986


Q ss_pred             CcHH------------HHHHHHHHhccCC--EEEEEcC
Q 017426          271 GLNK------------TMSTALGATCAGG--KVCLVGM  294 (372)
Q Consensus       271 g~~~------------~~~~~~~~l~~~G--~~v~~g~  294 (372)
                      +...            .....++.++..|  +++.++.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss  110 (317)
T CHL00194         73 TSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSI  110 (317)
T ss_pred             CCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecc
Confidence            5320            1123445554444  7777664

>PRK06500 short chain dehydrogenase; Provisional

Probab=96.04  E-value=0.065  Score=47.25  Aligned_cols=82  Identities=24%  Similarity=0.299  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      ++.++||.|+ |.+|..+++.+...|+ .|+.+.+++++.+ ..++++... .+..+..+ .+..+.+..+.+ ..+++|
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id   82 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAE-AFGRLD   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH-HhCCCC
Confidence            4678999998 9999999999999999 5777777766544 334555432 12222222 222222333322 235799


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|.+.|.
T Consensus        83 ~vi~~ag~   90 (249)
T PRK06500         83 AVFINAGV   90 (249)
T ss_pred             EEEECCCC
Confidence            99998764

>PRK06198 short chain dehydrogenase; Provisional

Probab=96.03  E-value=0.073  Score=47.30  Aligned_cols=83  Identities=20%  Similarity=0.214  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH----HHHHhCCCe-EEecCCCcc-cHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS----VAKEIGADN-IVKVSTNLQ-DIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~----~~~~lg~~~-v~~~~~~~~-~~~~~~~~~~~~~~~  261 (372)
                      .+.+++|.|+ |.+|..+++.+...|++.|+++++++++..    .++..+... .+..+-.++ ++.+.+....+ ..+
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~g   83 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADE-AFG   83 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH-HhC
Confidence            4678999998 999999999999999965777877765443    222334322 122232222 23333333322 125


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus        84 ~id~li~~ag~   94 (260)
T PRK06198         84 RLDALVNAAGL   94 (260)
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>PRK08862 short chain dehydrogenase; Provisional

Probab=96.03  E-value=0.072  Score=46.56  Aligned_cols=82  Identities=16%  Similarity=0.225  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-H---HhCCCe-EEecCC-CcccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGADN-IVKVST-NLQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~-v~~~~~-~~~~~~~~~~~~~~~~~~  261 (372)
                      +|.++||.|+ +++|.+++.-+...|+ +|+.+.+++++.+.+ +   +.+... .+..+. +.++..+.+.+..+..+.
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4678999988 9999999998888999 477777777665432 2   334322 222222 223343444444433233


Q ss_pred             cceEEEeCCC
Q 017426          262 GIDVSFDCAG  271 (372)
Q Consensus       262 ~~d~vid~~g  271 (372)
                      .+|++|++.|
T Consensus        83 ~iD~li~nag   92 (227)
T PRK08862         83 APDVLVNNWT   92 (227)
T ss_pred             CCCEEEECCc
Confidence            7999999886

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.02  E-value=0.031  Score=50.54  Aligned_cols=113  Identities=19%  Similarity=0.162  Sum_probs=68.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      ..+.++||+|+|++|.+++..+...|+..|+++.++.++.+.+ +.++....+.++   .+.    .+.    -..+|+|
T Consensus       121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~---~~~----~~~----~~~~Div  189 (278)
T PRK00258        121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELD---LEL----QEE----LADFDLI  189 (278)
T ss_pred             CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeec---ccc----hhc----cccCCEE
Confidence            4567899999999999999999999976789998988876544 444422101110   011    011    2579999


Q ss_pred             EeCCCcHHH-----HHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcE
Q 017426          267 FDCAGLNKT-----MSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD  312 (372)
Q Consensus       267 id~~g~~~~-----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  312 (372)
                      |+|++..-.     .......+.++..++.+-..+. ....+...-.++..
T Consensus       190 InaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~-~T~ll~~A~~~G~~  239 (278)
T PRK00258        190 INATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPL-PTPFLAWAKAQGAR  239 (278)
T ss_pred             EECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCC-CCHHHHHHHHCcCe
Confidence            999875310     0122356676666766654333 24444444444443

>PRK07478 short chain dehydrogenase; Provisional

Probab=96.02  E-value=0.086  Score=46.72  Aligned_cols=82  Identities=21%  Similarity=0.197  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HH---hCCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ +++|..++..+...|+ .|+.+.+++++.+.+ ++   .+... .+..+-.+ .+..+.+.++.+. .+
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   82 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER-FG   82 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh-cC
Confidence            3678999987 9999999999988999 477777777665433 22   23222 22223222 2233334433332 35


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|.+.|.
T Consensus        83 ~id~li~~ag~   93 (254)
T PRK07478         83 GLDIAFNNAGT   93 (254)
T ss_pred             CCCEEEECCCC
Confidence            79999998864

>PRK08643 acetoin reductase; Validated

Probab=95.99  E-value=0.085  Score=46.81  Aligned_cols=81  Identities=21%  Similarity=0.310  Sum_probs=50.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCCe-EEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GADN-IVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      +.++||+|+ |.+|..+++.+...|+ .|+.+++++++.+.+ ..+   +... .+..|-.+ +...+.+.++.+. .++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDT-FGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence            568899987 9999999999999998 577777776654332 222   2221 22222222 2333334443322 357


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|++|.+.|.
T Consensus        80 id~vi~~ag~   89 (256)
T PRK08643         80 LNVVVNNAGV   89 (256)
T ss_pred             CCEEEECCCC
Confidence            9999998864

>PRK04457 spermidine synthase; Provisional

Probab=95.99  E-value=0.16  Score=45.42  Aligned_cols=97  Identities=16%  Similarity=0.159  Sum_probs=65.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh-CCC----eEEecCCCcccHHHHHHHHHHHcCCc
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-GAD----NIVKVSTNLQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l-g~~----~v~~~~~~~~~~~~~~~~~~~~~~~~  262 (372)
                      .++.+||++|+|. |..+..+++......+++++.+++-.+.+++. +..    .+...   ..|..+.+..    ....
T Consensus        65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~---~~Da~~~l~~----~~~~  136 (262)
T PRK04457         65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVI---EADGAEYIAV----HRHS  136 (262)
T ss_pred             CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEE---ECCHHHHHHh----CCCC
Confidence            4567899998764 77788888877545799999999999988764 321    11111   1344443432    2457


Q ss_pred             ceEEE-eCCCc---------HHHHHHHHHHhccCCEEEEE
Q 017426          263 IDVSF-DCAGL---------NKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       263 ~d~vi-d~~g~---------~~~~~~~~~~l~~~G~~v~~  292 (372)
                      +|+|| |...+         .+.++.+.+.|+++|.++..
T Consensus       137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin  176 (262)
T PRK04457        137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN  176 (262)
T ss_pred             CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence            99997 43221         35678899999999998874

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=95.98  E-value=0.085  Score=46.98  Aligned_cols=79  Identities=30%  Similarity=0.320  Sum_probs=49.7

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCCeEEecCCCc-ccHHHHHHHHHHHcCCcceE
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~  265 (372)
                      ++||+|+ +++|.++++.+...|+ .|+.+++++++.+.+ +++   +....+..|-.+ ++..+.+.+..+ ..+++|+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~-~~g~id~   79 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWE-LLGGIDA   79 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHH-hcCCCCE
Confidence            6899987 9999999999988999 577777777654332 222   322233333222 233344444333 2357999


Q ss_pred             EEeCCCc
Q 017426          266 SFDCAGL  272 (372)
Q Consensus       266 vid~~g~  272 (372)
                      +|++.|.
T Consensus        80 li~naG~   86 (259)
T PRK08340         80 LVWNAGN   86 (259)
T ss_pred             EEECCCC
Confidence            9998774

>PLN02823 spermine synthase

Probab=95.96  E-value=0.081  Score=49.01  Aligned_cols=100  Identities=17%  Similarity=0.167  Sum_probs=61.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCC-----CcccHHHHHHHHHHHcCCcc
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-----NLQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~-----~~~~~~~~~~~~~~~~~~~~  263 (372)
                      ...+|||+|+|. |..+..+++..+...+++++.+++-.++++++-...--.+++     ...|-.+.+    +.....+
T Consensus       103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L----~~~~~~y  177 (336)
T PLN02823        103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAEL----EKRDEKF  177 (336)
T ss_pred             CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHH----hhCCCCc
Confidence            457899998753 556667777777778999999999999988753210000000     012222222    2235689


Q ss_pred             eEEEeCC-C----c-------HHHHH-HHHHHhccCCEEEEEc
Q 017426          264 DVSFDCA-G----L-------NKTMS-TALGATCAGGKVCLVG  293 (372)
Q Consensus       264 d~vid~~-g----~-------~~~~~-~~~~~l~~~G~~v~~g  293 (372)
                      |+||--. .    +       .+-++ .+.+.|+++|.++...
T Consensus       178 DvIi~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~q~  220 (336)
T PLN02823        178 DVIIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVTQA  220 (336)
T ss_pred             cEEEecCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEEec
Confidence            9997422 1    1       12344 6788999999987653

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=95.96  E-value=0.083  Score=46.97  Aligned_cols=81  Identities=28%  Similarity=0.343  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh---CCCe-EEecCCC-cccHHHHHHHHHHHcCCc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI---GADN-IVKVSTN-LQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l---g~~~-v~~~~~~-~~~~~~~~~~~~~~~~~~  262 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+.+++++...+..+++   +... .+..|-. .++..+.+.+..+. .++
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   84 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEA-FGR   84 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHH-cCC
Confidence            3578999987 9999999999999998 577777765433443333   3221 1222222 22333344443332 357


Q ss_pred             ceEEEeCCC
Q 017426          263 IDVSFDCAG  271 (372)
Q Consensus       263 ~d~vid~~g  271 (372)
                      +|++|.+.|
T Consensus        85 id~lv~nAg   93 (260)
T PRK12823         85 IDVLINNVG   93 (260)
T ss_pred             CeEEEECCc
Confidence            999999886

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=95.96  E-value=0.16  Score=44.48  Aligned_cols=104  Identities=26%  Similarity=0.379  Sum_probs=70.4

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHH----HhCCCeEEecCCCcccHHHHHHHH
Q 017426          181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKI  255 (372)
Q Consensus       181 ~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~~~~  255 (372)
                      .+...++.||++|+=.|.| .|.+++-|++..|. ..|+..+..++..+.++    ++|....+.+.  ..|..+.+   
T Consensus        86 I~~~~gi~pg~rVlEAGtG-SG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~--~~Dv~~~~---  159 (256)
T COG2519          86 IVARLGISPGSRVLEAGTG-SGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLK--LGDVREGI---  159 (256)
T ss_pred             HHHHcCCCCCCEEEEcccC-chHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEE--eccccccc---
Confidence            3466889999999998764 37788888887764 47888888887766554    34544322211  12222211   


Q ss_pred             HHHcCCcceEEE-eCCCcHHHHHHHHHHhccCCEEEEEc
Q 017426          256 QKAMGTGIDVSF-DCAGLNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       256 ~~~~~~~~d~vi-d~~g~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                         .+..+|.+| |--.-...++.+.+.|+++|.++.+.
T Consensus       160 ---~~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~  195 (256)
T COG2519         160 ---DEEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYS  195 (256)
T ss_pred             ---cccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEc
Confidence               134899887 44444467889999999999999884

>PRK07402 precorrin-6B methylase; Provisional

Probab=95.96  E-value=0.2  Score=42.67  Aligned_cols=104  Identities=13%  Similarity=0.281  Sum_probs=61.8

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHH
Q 017426          182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       182 l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      +....++++++||=.|+|. |..++.+++......+++++.+++..+.+++    ++...+....   .+..+.+..+  
T Consensus        33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~---~d~~~~~~~~--  106 (196)
T PRK07402         33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE---GSAPECLAQL--  106 (196)
T ss_pred             HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE---CchHHHHhhC--
Confidence            4556778889988887642 4555566655433479999999988776543    5554332221   2222222111  


Q ss_pred             HcCCcceE-EEeCCCc-HHHHHHHHHHhccCCEEEEEc
Q 017426          258 AMGTGIDV-SFDCAGL-NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       258 ~~~~~~d~-vid~~g~-~~~~~~~~~~l~~~G~~v~~g  293 (372)
                        ...+|. .++.... ...++.+.+.|+++|+++...
T Consensus       107 --~~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~  142 (196)
T PRK07402        107 --APAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA  142 (196)
T ss_pred             --CCCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence              122344 4443222 356788899999999988774

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=95.95  E-value=0.091  Score=48.54  Aligned_cols=81  Identities=20%  Similarity=0.309  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCC---C-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGA---D-NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~---~-~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |.+|..+++.+...|+ .|+++.+++++.+. .+++..   . ..+..|-.+ .+..+.+.++.+ ..+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~~   82 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRA-LGK   82 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHH-hCC
Confidence            4678999987 9999999998888998 57777777766543 344421   1 122222222 223333333222 245


Q ss_pred             cceEEEeCCC
Q 017426          262 GIDVSFDCAG  271 (372)
Q Consensus       262 ~~d~vid~~g  271 (372)
                      ++|++|++.|
T Consensus        83 ~iD~li~nAg   92 (322)
T PRK07453         83 PLDALVCNAA   92 (322)
T ss_pred             CccEEEECCc
Confidence            7999999877

>PRK07774 short chain dehydrogenase; Provisional

Probab=95.95  E-value=0.095  Score=46.22  Aligned_cols=82  Identities=24%  Similarity=0.293  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |.+|..+++.+...|+ .|+.++++++..+.+ +.+   +.. ..+..+-.+ ++..+.+.++.+. .+
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   82 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA-FG   82 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-hC
Confidence            4678999998 9999999999988998 577777776554322 222   211 122223222 2233333333332 34


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|.+.|.
T Consensus        83 ~id~vi~~ag~   93 (250)
T PRK07774         83 GIDYLVNNAAI   93 (250)
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>PRK05717 oxidoreductase; Validated

Probab=95.95  E-value=0.095  Score=46.50  Aligned_cols=82  Identities=26%  Similarity=0.251  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCCC-eEEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      .|.++||+|+ |.+|..++..+...|+ .|+.++++.++.+ ..+.++.. ..+..|-.+ .+..+.+.++.+. .+++|
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~id   86 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQ-FGRLD   86 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHH-hCCCC
Confidence            4678999987 9999999999988998 5677766655443 33445422 222233222 2233334443322 35799


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|.+.|.
T Consensus        87 ~li~~ag~   94 (255)
T PRK05717         87 ALVCNAAI   94 (255)
T ss_pred             EEEECCCc
Confidence            99998764

>PRK06172 short chain dehydrogenase; Provisional

Probab=95.95  E-value=0.094  Score=46.41  Aligned_cols=82  Identities=27%  Similarity=0.342  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH----HHHhCCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV----AKEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~----~~~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||.|+ |.+|..+++.+...|+ .|+.+.+++++.+.    +++.+.. ..+..+-.+ .+..+.+.+..+. .+
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~g   83 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAA-YG   83 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-hC
Confidence            4679999998 9999999998888998 57777787765432    2233322 222223222 2233333333222 35


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|.+.|.
T Consensus        84 ~id~li~~ag~   94 (253)
T PRK06172         84 RLDYAFNNAGI   94 (253)
T ss_pred             CCCEEEECCCC
Confidence            79999998764

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=95.94  E-value=0.065  Score=47.56  Aligned_cols=82  Identities=17%  Similarity=0.289  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHh---CCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI---GADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~l---g~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |.+|..+++.+...|+ .|+.+++++++.+. .+.+   |... .+..|-.+ ++..+.+.+..+ ..+
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   86 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA-EIG   86 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH-hcC
Confidence            4679999987 9999999999988999 57777777665432 2222   3211 22223222 233333333322 246


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|.+.|.
T Consensus        87 ~~d~li~~ag~   97 (255)
T PRK07523         87 PIDILVNNAGM   97 (255)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.94  E-value=0.11  Score=45.65  Aligned_cols=82  Identities=24%  Similarity=0.263  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HH---hCCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||.|+ |.+|..++..+...|. .|+++++++++.+.+ +.   .+.. ..+..|-.+ +++.+.+..+.+ ..+
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLE-QFG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHH-HcC
Confidence            4568999987 9999999999999998 577788877655433 22   2222 122233222 233333443332 235


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|.+.|.
T Consensus        83 ~id~lv~~ag~   93 (241)
T PRK07454         83 CPDVLINNAGM   93 (241)
T ss_pred             CCCEEEECCCc
Confidence            79999998874

>PRK07326 short chain dehydrogenase; Provisional

Probab=95.92  E-value=0.079  Score=46.33  Aligned_cols=82  Identities=27%  Similarity=0.269  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCC---CeEEecCCC-cccHHHHHHHHHHHcCCc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGA---DNIVKVSTN-LQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~---~~v~~~~~~-~~~~~~~~~~~~~~~~~~  262 (372)
                      ++.++||+|+ |.+|..+++.+...|++ |+++.+++++.. ..+.+..   ...+..+-. ..++.+.++++.+. .++
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   82 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYK-VAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAA-FGG   82 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence            4678999997 99999999988888995 777777776544 3344431   122222222 23344444444332 357


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|++|++.|.
T Consensus        83 ~d~vi~~ag~   92 (237)
T PRK07326         83 LDVLIANAGV   92 (237)
T ss_pred             CCEEEECCCC
Confidence            9999998763

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=95.92  E-value=0.071  Score=45.05  Aligned_cols=97  Identities=21%  Similarity=0.253  Sum_probs=61.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH----HhCCCeEEecCCCcccHHHHHHHHHHHcCCc
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~  262 (372)
                      ++++.+||-.|+|. |..++.+++......|++++.+++..+.++    +.+.+.+.....   +..    ++.  ....
T Consensus        43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~---d~~----~~~--~~~~  112 (187)
T PRK00107         43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHG---RAE----EFG--QEEK  112 (187)
T ss_pred             cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEec---cHh----hCC--CCCC
Confidence            55688999988743 555666666544347999999988766554    355543222111   211    111  1357


Q ss_pred             ceEEEeCCC--cHHHHHHHHHHhccCCEEEEEc
Q 017426          263 IDVSFDCAG--LNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       263 ~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      +|+|+-...  -+..+..+.+.|+++|+++.+-
T Consensus       113 fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~  145 (187)
T PRK00107        113 FDVVTSRAVASLSDLVELCLPLLKPGGRFLALK  145 (187)
T ss_pred             ccEEEEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence            999996422  2356778889999999998773

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.91  E-value=0.096  Score=47.24  Aligned_cols=82  Identities=20%  Similarity=0.283  Sum_probs=50.3

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCeEEEEecChh---HHH-HHHHhCCCeEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDDY---RLS-VAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga---g~~G~~ai~l~~~~g~~~vv~v~~~~~---~~~-~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+   +++|.++++.+...|+ .|+.+.++++   +.+ ..++++....+..|-.+ ++..+.+.++.+ ..
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~-~~   81 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKK-DL   81 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHH-Hc
Confidence            3678999986   4899999999888999 4666666643   222 22344533333333222 233344444333 23


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +.+|++|++.|.
T Consensus        82 g~iDilVnnAG~   93 (274)
T PRK08415         82 GKIDFIVHSVAF   93 (274)
T ss_pred             CCCCEEEECCcc
Confidence            689999998873

>PRK08339 short chain dehydrogenase; Provisional

Probab=95.91  E-value=0.1  Score=46.68  Aligned_cols=81  Identities=16%  Similarity=0.233  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh----CCC-eEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GAD-NIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l----g~~-~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ +++    +.. ..+..|-.+ .+..+.+.+..+  .
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~--~   83 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN--I   83 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh--h
Confidence            4678999987 9999999999999999 577777877665433 222    322 122223222 233333333322  3


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|+++++.|.
T Consensus        84 g~iD~lv~nag~   95 (263)
T PRK08339         84 GEPDIFFFSTGG   95 (263)
T ss_pred             CCCcEEEECCCC
Confidence            579999998874

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.90  E-value=0.055  Score=40.88  Aligned_cols=91  Identities=16%  Similarity=0.242  Sum_probs=58.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .|.+|||.|+|.+|..-++.+...|+ .+.+++...   +..+  +......     ..+.+        .-.++++||.
T Consensus         6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~~-----~~~~~--------~l~~~~lV~~   66 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLIR-----REFEE--------DLDGADLVFA   66 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEEE-----SS-GG--------GCTTESEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHHh-----hhHHH--------HHhhheEEEe
Confidence            47899999999999999999999998 566665654   2222  2222221     12211        1357999999


Q ss_pred             CCCcHHHHHHHHHHhccCCEEEEEcCCCCC
Q 017426          269 CAGLNKTMSTALGATCAGGKVCLVGMGHHE  298 (372)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~  298 (372)
                      +.+.+..-+......+..|.++.....+..
T Consensus        67 at~d~~~n~~i~~~a~~~~i~vn~~D~p~~   96 (103)
T PF13241_consen   67 ATDDPELNEAIYADARARGILVNVVDDPEL   96 (103)
T ss_dssp             -SS-HHHHHHHHHHHHHTTSEEEETT-CCC
T ss_pred             cCCCHHHHHHHHHHHhhCCEEEEECCCcCC
Confidence            999876555666667778888877654443

>PRK08628 short chain dehydrogenase; Provisional

Probab=95.90  E-value=0.089  Score=46.72  Aligned_cols=82  Identities=23%  Similarity=0.212  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh---CCC-eEEecCCC-cccHHHHHHHHHHHcCCc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l---g~~-~v~~~~~~-~~~~~~~~~~~~~~~~~~  262 (372)
                      .+.++||+|+ |.+|..+++.+...|++ ++++.+++++.+..+.+   +.. ..+..+-. .+++...+.++.+. .++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   83 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAI-PVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK-FGR   83 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCc-EEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh-cCC
Confidence            3678999998 99999999988889995 56666766655444433   322 22222222 22333344444332 358


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|++|.+.|.
T Consensus        84 id~vi~~ag~   93 (258)
T PRK08628         84 IDGLVNNAGV   93 (258)
T ss_pred             CCEEEECCcc
Confidence            9999999873

>PRK01581 speE spermidine synthase; Validated

Probab=95.90  E-value=0.28  Score=45.67  Aligned_cols=98  Identities=16%  Similarity=0.130  Sum_probs=64.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC-----------CeEEecCCCcccHHHHHHHHH
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA-----------DNIVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~-----------~~v~~~~~~~~~~~~~~~~~~  256 (372)
                      ....+|||.|+| .|.++..+++..+...|++++.+++-.+.++.+..           +.+..   .-.|..+.++.  
T Consensus       149 ~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~v---vi~Da~~fL~~--  222 (374)
T PRK01581        149 IDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNV---HVCDAKEFLSS--  222 (374)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEE---EECcHHHHHHh--
Confidence            445799999865 46677778777666789999999999998886310           11110   11233333322  


Q ss_pred             HHcCCcceEEEeCCCc-----------HHHHHHHHHHhccCCEEEEEc
Q 017426          257 KAMGTGIDVSFDCAGL-----------NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~-----------~~~~~~~~~~l~~~G~~v~~g  293 (372)
                        ....||+||--...           .+.+..+.+.|+++|.++...
T Consensus       223 --~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs  268 (374)
T PRK01581        223 --PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS  268 (374)
T ss_pred             --cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence              35679999854322           124667888999999988764

>PRK07890 short chain dehydrogenase; Provisional

Probab=95.89  E-value=0.1  Score=46.25  Aligned_cols=82  Identities=21%  Similarity=0.151  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~v~~~~~~-~~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||.|+ |.+|..+++.+...|+ .|+++++++++.+.+ +++   +.. ..+..+-. .+++...+.+..+. -+
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g   81 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALER-FG   81 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHH-cC
Confidence            4678999987 9999999999999999 577777777654433 222   322 12222222 22333334333322 35


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      .+|++|.+.|.
T Consensus        82 ~~d~vi~~ag~   92 (258)
T PRK07890         82 RVDALVNNAFR   92 (258)
T ss_pred             CccEEEECCcc
Confidence            79999998764

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=95.89  E-value=0.054  Score=49.11  Aligned_cols=112  Identities=21%  Similarity=0.140  Sum_probs=66.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCC----CeEEecCCCcccHHHHHHHHHHHcCCc
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGA----DNIVKVSTNLQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~----~~v~~~~~~~~~~~~~~~~~~~~~~~~  262 (372)
                      ..+.+++|.|+|++|.+++..+...|++.+.+++++++|.+.+ +.++.    ..+...    .++    .+.    -..
T Consensus       125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~----~~~----~~~----~~~  192 (284)
T PRK12549        125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG----SDL----AAA----LAA  192 (284)
T ss_pred             ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec----cch----Hhh----hCC
Confidence            3567999999999999999999999998899999998876644 44431    112111    111    111    146


Q ss_pred             ceEEEeCCCcH--H--HHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcE
Q 017426          263 IDVSFDCAGLN--K--TMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD  312 (372)
Q Consensus       263 ~d~vid~~g~~--~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  312 (372)
                      +|+||+|+...  .  ........+.+...++.+-..+. .+..+...-.++..
T Consensus       193 aDiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY~P~-~T~ll~~A~~~G~~  245 (284)
T PRK12549        193 ADGLVHATPTGMAKHPGLPLPAELLRPGLWVADIVYFPL-ETELLRAARALGCR  245 (284)
T ss_pred             CCEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEeeeCCC-CCHHHHHHHHCCCe
Confidence            99999995421  0  00112244665555555544333 24444444444443

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.88  E-value=0.15  Score=44.47  Aligned_cols=98  Identities=23%  Similarity=0.275  Sum_probs=62.5

Q ss_pred             HHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCC--eEEEEecC----hhH--------HHHHHHhCCCeEEecCCCc
Q 017426          181 ACRRANI-GPETNVLIMGAGPIGLVTMLAARAFGAP--RIVIVDVD----DYR--------LSVAKEIGADNIVKVSTNL  245 (372)
Q Consensus       181 ~l~~~~~-~~g~~vlI~Gag~~G~~ai~l~~~~g~~--~vv~v~~~----~~~--------~~~~~~lg~~~v~~~~~~~  245 (372)
                      +++..+. -.+.+++|+|+|..|.+++..+...|.+  +++.++++    ++|        .++++.++... .     .
T Consensus        15 al~~~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~-----~   88 (226)
T cd05311          15 ALKLVGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T-----G   88 (226)
T ss_pred             HHHHhCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c-----c
Confidence            3444332 3567999999999999999999999998  89999887    343        33445544211 0     0


Q ss_pred             ccHHHHHHHHHHHcCCcceEEEeCCCcHHHH-HHHHHHhccCCEEEEEc
Q 017426          246 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTM-STALGATCAGGKVCLVG  293 (372)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g  293 (372)
                      .++.+.+        .++|++|++++.. .+ ...++.|.++..+..+.
T Consensus        89 ~~l~~~l--------~~~dvlIgaT~~G-~~~~~~l~~m~~~~ivf~ls  128 (226)
T cd05311          89 GTLKEAL--------KGADVFIGVSRPG-VVKKEMIKKMAKDPIVFALA  128 (226)
T ss_pred             CCHHHHH--------hcCCEEEeCCCCC-CCCHHHHHhhCCCCEEEEeC
Confidence            1222222        3489999998732 33 35566777766555543

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK07035 short chain dehydrogenase; Provisional

Probab=95.88  E-value=0.11  Score=46.07  Aligned_cols=82  Identities=16%  Similarity=0.182  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||.|+ |.+|.++++.+...|+ .|+.+++++++.+.+ +++   +.. ..+..+-.+ .+..+.+.+..+. -+
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   84 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER-HG   84 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            3568999987 9999999999999998 577887877655433 222   321 222222222 2233333333322 35


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|+++.+.|.
T Consensus        85 ~id~li~~ag~   95 (252)
T PRK07035         85 RLDILVNNAAA   95 (252)
T ss_pred             CCCEEEECCCc
Confidence            79999988763

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.87  E-value=0.099  Score=46.71  Aligned_cols=82  Identities=18%  Similarity=0.248  Sum_probs=49.3

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga---g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+   +++|.++++.+...|++ |+.+.++++..+.+++    ++....+..|-.+ ++..+.+.+..+ ..
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-~~   82 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAE-LAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGK-HW   82 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCE-EEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHH-Hh
Confidence            4678999984   58999999999899995 6666554433333333    3432233333222 333334444333 23


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|+++++.|.
T Consensus        83 g~iD~lVnnAG~   94 (261)
T PRK08690         83 DGLDGLVHSIGF   94 (261)
T ss_pred             CCCcEEEECCcc
Confidence            679999998764

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=95.87  E-value=0.11  Score=46.22  Aligned_cols=82  Identities=23%  Similarity=0.268  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-H---hCCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-E---IGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~---lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||.|+ |.+|..+++.+...|+ .|++++++.++.+.+. .   .+.. ..+..+-.+ +++.+.+.++.+. .+
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~-~~   88 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER-FG   88 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence            4679999987 9999999999988999 5777777776654432 2   2222 122222222 2333333333321 35


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|.+|.+.|.
T Consensus        89 ~id~vi~~ag~   99 (259)
T PRK08213         89 HVDILVNNAGA   99 (259)
T ss_pred             CCCEEEECCCC
Confidence            79999998764

>PRK05854 short chain dehydrogenase; Provisional

Probab=95.86  E-value=0.084  Score=48.61  Aligned_cols=82  Identities=18%  Similarity=0.243  Sum_probs=49.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHh----C-CC-eEEecCCCc-ccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI----G-AD-NIVKVSTNL-QDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~l----g-~~-~v~~~~~~~-~~~~~~~~~~~~~~  259 (372)
                      .|.+++|+|+ +++|.++++.+...|+ .|+.+.+++++.+. ++++    + .. .++..|-.+ .+..+...++.+ .
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~-~   90 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA-E   90 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH-h
Confidence            3678999998 9999999998888998 56667677665442 2322    1 11 122223222 222223333322 2


Q ss_pred             CCcceEEEeCCCc
Q 017426          260 GTGIDVSFDCAGL  272 (372)
Q Consensus       260 ~~~~d~vid~~g~  272 (372)
                      .+++|++|++.|.
T Consensus        91 ~~~iD~li~nAG~  103 (313)
T PRK05854         91 GRPIHLLINNAGV  103 (313)
T ss_pred             CCCccEEEECCcc
Confidence            4679999988763

>PRK08226 short chain dehydrogenase; Provisional

Probab=95.86  E-value=0.11  Score=46.29  Aligned_cols=82  Identities=22%  Similarity=0.301  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh---CCCe-EEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI---GADN-IVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l---g~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      .+.++||+|+ |.+|..+++.+...|++ |+.++++++..+..+++   +... .+..|-.+ .+..+.+.++.+ ..++
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~~~   82 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGAN-LILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKE-KEGR   82 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHH-HcCC
Confidence            4678999987 99999999999989994 77777776544433332   3221 22222222 223333333332 2357


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|++|.+.|.
T Consensus        83 id~vi~~ag~   92 (263)
T PRK08226         83 IDILVNNAGV   92 (263)
T ss_pred             CCEEEECCCc
Confidence            9999998873

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.86  E-value=0.094  Score=46.56  Aligned_cols=82  Identities=15%  Similarity=0.212  Sum_probs=50.2

Q ss_pred             CCCEEEEECCC---HHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCe--EEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          189 PETNVLIMGAG---PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN--IVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       189 ~g~~vlI~Gag---~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~--v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      .|.++||+|++   ++|.++++.+...|++ |+.+.++++..+.++++....  .+..|-.+ ++..+.+.+..+. .+.
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g~   83 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGAT-VIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKER-VGK   83 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCE-EEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHH-hCC
Confidence            46789999874   8999999999889994 677767654444445443211  22223222 2333334333322 357


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|+++++.|.
T Consensus        84 iD~lv~nAg~   93 (252)
T PRK06079         84 IDGIVHAIAY   93 (252)
T ss_pred             CCEEEEcccc
Confidence            9999998763

>PRK06483 dihydromonapterin reductase; Provisional

Probab=95.85  E-value=0.11  Score=45.52  Aligned_cols=80  Identities=20%  Similarity=0.329  Sum_probs=49.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhH-HHHHHHhCCCeEEecCCCc-ccHHHHHHHHHHHcCCcceEE
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR-LSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~-~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      +.++||.|+ +.+|..+++.+...|++ |+.++++++. .+.++..++. .+..|-.+ .+..+.+.+..+ ..+++|++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~-~~~~id~l   78 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQP-VIVSYRTHYPAIDGLRQAGAQ-CIQADFSTNAGIMAFIDELKQ-HTDGLRAI   78 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCE-EEEcCCCCHHHHHHHHHHHHh-hCCCccEE
Confidence            458999987 99999999998889994 6666665543 3344445532 23333222 233333443332 13579999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      +++.|.
T Consensus        79 v~~ag~   84 (236)
T PRK06483         79 IHNASD   84 (236)
T ss_pred             EECCcc
Confidence            998764

>PRK07576 short chain dehydrogenase; Provisional

Probab=95.83  E-value=0.12  Score=46.20  Aligned_cols=81  Identities=20%  Similarity=0.237  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      ++.++||.|+ |.+|..+++.+...|+ .|+.+++++++.+.. +.+   +.. ..+..|-.+ .+....+.+.... .+
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~-~~   85 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE-FG   85 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            5789999988 9999999999999998 477777776654322 222   322 122233222 2333344443322 35


Q ss_pred             cceEEEeCCC
Q 017426          262 GIDVSFDCAG  271 (372)
Q Consensus       262 ~~d~vid~~g  271 (372)
                      ++|++|.+.|
T Consensus        86 ~iD~vi~~ag   95 (264)
T PRK07576         86 PIDVLVSGAA   95 (264)
T ss_pred             CCCEEEECCC
Confidence            7999998775

>PRK06194 hypothetical protein; Provisional

Probab=95.83  E-value=0.11  Score=47.07  Aligned_cols=81  Identities=22%  Similarity=0.321  Sum_probs=49.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHh---CCCe-EEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI---GADN-IVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~l---g~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      +.++||+|+ |.+|..+++.+...|+ .|++++++.++.+. ..++   +... ++..+-.+ +++.+.+....+ ..++
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~g~   83 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALE-RFGA   83 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-HcCC
Confidence            578999987 9999999999888998 57777777655433 2332   3221 12222222 233333333322 2357


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|++|.+.|.
T Consensus        84 id~vi~~Ag~   93 (287)
T PRK06194         84 VHLLFNNAGV   93 (287)
T ss_pred             CCEEEECCCC
Confidence            9999998875

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.83  E-value=0.11  Score=46.13  Aligned_cols=82  Identities=18%  Similarity=0.185  Sum_probs=49.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH---HHHhCCC-eEEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV---AKEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~---~~~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      .+.++||+|+ +.+|.++++.+...|++ |+++.++++..+.   +.+.+.. ..+..+-.+ ++..+.+.+..+ ..++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~-~~g~   91 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGAD-IIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALE-EFGK   91 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-HcCC
Confidence            4689999998 99999999999999995 6666565322222   2233422 222233222 223333444333 2357


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|++|.+.|.
T Consensus        92 id~li~~ag~  101 (258)
T PRK06935         92 IDILVNNAGT  101 (258)
T ss_pred             CCEEEECCCC
Confidence            9999998764

>PRK05875 short chain dehydrogenase; Provisional

Probab=95.83  E-value=0.11  Score=46.61  Aligned_cols=81  Identities=23%  Similarity=0.297  Sum_probs=49.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhC------CCeEEecCCCc-ccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIG------ADNIVKVSTNL-QDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg------~~~v~~~~~~~-~~~~~~~~~~~~~~  259 (372)
                      ++.++||.|+ |.+|..+++.+...|+ .|+.+.+++++.+ ..+.+.      ...++..+-.+ .++.+.+.+..+ .
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~   83 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA-W   83 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH-H
Confidence            3679999998 9999999999999999 5777777765543 223321      11222222222 223333333322 1


Q ss_pred             CCcceEEEeCCC
Q 017426          260 GTGIDVSFDCAG  271 (372)
Q Consensus       260 ~~~~d~vid~~g  271 (372)
                      .+++|++|.+.|
T Consensus        84 ~~~~d~li~~ag   95 (276)
T PRK05875         84 HGRLHGVVHCAG   95 (276)
T ss_pred             cCCCCEEEECCC
Confidence            357999999876

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.82  E-value=0.11  Score=46.16  Aligned_cols=82  Identities=22%  Similarity=0.341  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HH---HHhCCCe-EEecCCCccc-HHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VA---KEIGADN-IVKVSTNLQD-IAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~---~~lg~~~-v~~~~~~~~~-~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |.+|..+++.+...|++ |+.+.+++++.+ ..   ++.+... .+..|-.+.+ +.+.+.+... ..+
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~   83 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAA-VAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAE-RFG   83 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHH-HcC
Confidence            3678999998 99999999999999995 677777775443 22   2334332 2223322222 2233332221 235


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|.+.|.
T Consensus        84 ~~d~vi~~ag~   94 (262)
T PRK13394         84 SVDILVSNAGI   94 (262)
T ss_pred             CCCEEEECCcc
Confidence            79999998864

>PRK08317 hypothetical protein; Provisional

Probab=95.82  E-value=0.21  Score=43.67  Aligned_cols=103  Identities=23%  Similarity=0.317  Sum_probs=67.7

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHHh--C-CCeEEecCCCcccHHHHHHHHHH
Q 017426          182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKEI--G-ADNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       182 l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~l--g-~~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      ++...++++++||-.|+|. |..+..+++..+ ...+++++.+++..+.+++.  . ...+........++.     +  
T Consensus        12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-----~--   83 (241)
T PRK08317         12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLP-----F--   83 (241)
T ss_pred             HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCC-----C--
Confidence            3557788999999999865 888889988873 34799999999988877664  1 111111001001100     1  


Q ss_pred             HcCCcceEEEeCC------CcHHHHHHHHHHhccCCEEEEEc
Q 017426          258 AMGTGIDVSFDCA------GLNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       258 ~~~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                       ....+|+|+...      .-...+..+.+.|+++|.++...
T Consensus        84 -~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  124 (241)
T PRK08317         84 -PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD  124 (241)
T ss_pred             -CCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence             135799887532      22346778899999999998765

>PRK12743 oxidoreductase; Provisional

Probab=95.80  E-value=0.11  Score=46.26  Aligned_cols=82  Identities=17%  Similarity=0.160  Sum_probs=48.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH----HHHhCCC-eEEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV----AKEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~----~~~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      +.++||+|+ +.+|..+++.+...|+++++...++.++.+.    ++..+.. ..+..+-.+ .+....+.++.+. .++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~   80 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQR-LGR   80 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence            468999988 9999999999999999543443444444322    2234432 222233222 2233333333322 357


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|++|.+.|.
T Consensus        81 id~li~~ag~   90 (256)
T PRK12743         81 IDVLVNNAGA   90 (256)
T ss_pred             CCEEEECCCC
Confidence            9999988764

>PRK08267 short chain dehydrogenase; Provisional

Probab=95.80  E-value=0.098  Score=46.53  Aligned_cols=81  Identities=26%  Similarity=0.344  Sum_probs=51.0

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhC-C-CeEEecCCCc-ccHHHHHHHHHHHcCCcceE
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIG-A-DNIVKVSTNL-QDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg-~-~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~  265 (372)
                      .++||+|+ |.+|..+++.+...|+ .|++++++.++.+.+ +.++ . ..++..|-.+ .++.+.+....+...+++|+
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~   80 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV   80 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            47899998 9999999998888998 577777777765544 3333 1 1222222222 23333344333221468999


Q ss_pred             EEeCCCc
Q 017426          266 SFDCAGL  272 (372)
Q Consensus       266 vid~~g~  272 (372)
                      ++.+.|.
T Consensus        81 vi~~ag~   87 (260)
T PRK08267         81 LFNNAGI   87 (260)
T ss_pred             EEECCCC
Confidence            9998875

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.80  E-value=0.11  Score=46.13  Aligned_cols=82  Identities=21%  Similarity=0.246  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChh--HHHHHHHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCCcc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY--RLSVAKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~--~~~~~~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~~  263 (372)
                      .+.++||+|+ +++|.++++.+...|++ |+.+.+++.  ..+.+++.+... .+..|-.+ ++..+.+.+..+. .+++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~i   84 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGAD-IVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEV-MGHI   84 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHH-cCCC
Confidence            4678999987 99999999999999995 666655432  223344445322 22223222 3333444443332 3579


Q ss_pred             eEEEeCCCc
Q 017426          264 DVSFDCAGL  272 (372)
Q Consensus       264 d~vid~~g~  272 (372)
                      |+++++.|.
T Consensus        85 D~lv~~ag~   93 (251)
T PRK12481         85 DILINNAGI   93 (251)
T ss_pred             CEEEECCCc
Confidence            999998764

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=95.78  E-value=0.12  Score=46.01  Aligned_cols=81  Identities=15%  Similarity=0.245  Sum_probs=49.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh----CC--CeEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GA--DNIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l----g~--~~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      +.++||+|+ |.+|.+++..+...|+ .++.++++.++.+.+ +.+    +.  ...+..+-.+ .+....+.++.+ ..
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~-~~   79 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDE-IF   79 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHH-Hc
Confidence            468999987 9999999999988998 577777776554332 222    21  1222223222 223333333322 23


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|+++.+.|.
T Consensus        80 ~~id~vv~~ag~   91 (259)
T PRK12384         80 GRVDLLVYNAGI   91 (259)
T ss_pred             CCCCEEEECCCc
Confidence            579999998863

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=95.77  E-value=0.12  Score=46.57  Aligned_cols=81  Identities=21%  Similarity=0.269  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHh---CCC-eEEecCCCcc-cHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI---GAD-NIVKVSTNLQ-DIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~l---g~~-~v~~~~~~~~-~~~~~~~~~~~~~~~  261 (372)
                      .+.++||.|+ |.+|.++++.+...|+ .|+++++++++.+. .+++   +.. ..+..+-.+. +..+.+.++.+ ..+
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~g   86 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILE-DFG   86 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-HcC
Confidence            4678999987 9999999999999999 57777777655433 2332   322 1222232222 23333333322 235


Q ss_pred             cceEEEeCCC
Q 017426          262 GIDVSFDCAG  271 (372)
Q Consensus       262 ~~d~vid~~g  271 (372)
                      ++|++|.+.|
T Consensus        87 ~id~li~~ag   96 (278)
T PRK08277         87 PCDILINGAG   96 (278)
T ss_pred             CCCEEEECCC
Confidence            8999999877

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.77  E-value=0.061  Score=52.83  Aligned_cols=73  Identities=26%  Similarity=0.414  Sum_probs=52.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      +.++++|+|+|.|.+|++++++++..|+ .|++.+.++.+.+.++++|+..+ .. .+   ..+.   +     ..+|+|
T Consensus         9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~-~~-~~---~~~~---l-----~~~D~V   74 (488)
T PRK03369          9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATV-ST-SD---AVQQ---I-----ADYALV   74 (488)
T ss_pred             ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEE-cC-cc---hHhH---h-----hcCCEE
Confidence            4578999999999999999999999998 57788877666666677776432 11 11   1111   1     357999


Q ss_pred             EeCCCcH
Q 017426          267 FDCAGLN  273 (372)
Q Consensus       267 id~~g~~  273 (372)
                      +.+.|.+
T Consensus        75 V~SpGi~   81 (488)
T PRK03369         75 VTSPGFR   81 (488)
T ss_pred             EECCCCC
Confidence            9988765

>PLN02366 spermidine synthase

Probab=95.77  E-value=0.095  Score=48.00  Aligned_cols=100  Identities=23%  Similarity=0.251  Sum_probs=64.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCC--------eEEecCCCcccHHHHHHHHHHH
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD--------NIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~--------~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      .++.++|||+|+|. |.++..++++.+...+.+++.+++-.+.++++-..        .+-.   ...|..+.+++.   
T Consensus        89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~v---i~~Da~~~l~~~---  161 (308)
T PLN02366         89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNL---HIGDGVEFLKNA---  161 (308)
T ss_pred             CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEE---EEChHHHHHhhc---
Confidence            35578999998755 56677788877767899999999888887774211        1110   012222223221   


Q ss_pred             cCCcceEEEeCCCc----------HHHHHHHHHHhccCCEEEEEc
Q 017426          259 MGTGIDVSFDCAGL----------NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       259 ~~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      .++.+|+||--...          .+.++.+.+.|+++|.++..+
T Consensus       162 ~~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~  206 (308)
T PLN02366        162 PEGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA  206 (308)
T ss_pred             cCCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence            24579999853222          234678889999999987654

>PRK07904 short chain dehydrogenase; Provisional

Probab=95.75  E-value=0.11  Score=46.11  Aligned_cols=83  Identities=20%  Similarity=0.328  Sum_probs=49.8

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcC-CCeEEEEecChhH-HH-HHHH---hCC--CeEEecCCCc-ccHHHHHHHHH
Q 017426          187 IGPETNVLIMGA-GPIGLVTMLAARAFG-APRIVIVDVDDYR-LS-VAKE---IGA--DNIVKVSTNL-QDIAEEVEKIQ  256 (372)
Q Consensus       187 ~~~g~~vlI~Ga-g~~G~~ai~l~~~~g-~~~vv~v~~~~~~-~~-~~~~---lg~--~~v~~~~~~~-~~~~~~~~~~~  256 (372)
                      +..+.++||+|+ |++|.++++-+...| + .|+.+.+++++ .+ ..++   .+.  ..++..|-.+ .+..+.+.+..
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   83 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF   83 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence            456779999998 999999998777665 7 56777676653 22 3333   332  1233333322 23333344443


Q ss_pred             HHcCCcceEEEeCCCc
Q 017426          257 KAMGTGIDVSFDCAGL  272 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~  272 (372)
                      +  .+++|++|.+.|.
T Consensus        84 ~--~g~id~li~~ag~   97 (253)
T PRK07904         84 A--GGDVDVAIVAFGL   97 (253)
T ss_pred             h--cCCCCEEEEeeec
Confidence            2  2589999877654

>PRK07063 short chain dehydrogenase; Provisional

Probab=95.74  E-value=0.089  Score=46.82  Aligned_cols=82  Identities=27%  Similarity=0.284  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh-----CCC-eEEecCCC-cccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI-----GAD-NIVKVSTN-LQDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l-----g~~-~v~~~~~~-~~~~~~~~~~~~~~~  259 (372)
                      .+.++||.|+ +++|.++++.+...|+ .|+.+++++++.+.+ +.+     +.. ..+..+-. ..+..+.+.++.+. 
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-   83 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA-   83 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH-
Confidence            3678999987 9999999999999999 477777776654433 333     211 12222222 22333444443332 


Q ss_pred             CCcceEEEeCCCc
Q 017426          260 GTGIDVSFDCAGL  272 (372)
Q Consensus       260 ~~~~d~vid~~g~  272 (372)
                      .+++|++|.+.|.
T Consensus        84 ~g~id~li~~ag~   96 (260)
T PRK07063         84 FGPLDVLVNNAGI   96 (260)
T ss_pred             hCCCcEEEECCCc
Confidence            3579999998873

>PRK08703 short chain dehydrogenase; Provisional

Probab=95.73  E-value=0.1  Score=45.70  Aligned_cols=83  Identities=22%  Similarity=0.338  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CC-C-eE--EecCCC-cccHHHHHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GA-D-NI--VKVSTN-LQDIAEEVEKIQKA  258 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~-~-~v--~~~~~~-~~~~~~~~~~~~~~  258 (372)
                      ++.+++|+|+ |.+|..+++.+...|+ .|+++++++++.+.+ +.+   +. . ..  .+..+. ..++.+...++.+.
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            3578999987 9999999999988999 577787887765433 222   21 1 11  122111 12333333333332


Q ss_pred             cCCcceEEEeCCCc
Q 017426          259 MGTGIDVSFDCAGL  272 (372)
Q Consensus       259 ~~~~~d~vid~~g~  272 (372)
                      ..+.+|++|.+.|.
T Consensus        84 ~~~~id~vi~~ag~   97 (239)
T PRK08703         84 TQGKLDGIVHCAGY   97 (239)
T ss_pred             hCCCCCEEEEeccc
Confidence            22578999998874

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.72  E-value=0.028  Score=54.57  Aligned_cols=92  Identities=12%  Similarity=0.167  Sum_probs=54.9

Q ss_pred             hcCCCCCCEEE----EECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHH
Q 017426          184 RANIGPETNVL----IMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       184 ~~~~~~g~~vl----I~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      ..++++|+++|    |+|+ |++|.+++|+++..|++ |+.+...+++....+..+....+ ++.....+.+.+..+.  
T Consensus        28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~l~~~~--  103 (450)
T PRK08261         28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYD-VVANNDGGLTWAAGWGDRFGALV-FDATGITDPADLKALY--  103 (450)
T ss_pred             ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCe-eeecCccccccccCcCCcccEEE-EECCCCCCHHHHHHHH--
Confidence            36778999988    8875 99999999999999995 66665555533333333443221 2222223333332221  


Q ss_pred             cCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcC
Q 017426          259 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       259 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                                     ..++..++.|.++|+++.++.
T Consensus       104 ---------------~~~~~~l~~l~~~griv~i~s  124 (450)
T PRK08261        104 ---------------EFFHPVLRSLAPCGRVVVLGR  124 (450)
T ss_pred             ---------------HHHHHHHHhccCCCEEEEEcc
Confidence                           234455566666677766653

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.72  E-value=0.13  Score=46.13  Aligned_cols=81  Identities=17%  Similarity=0.201  Sum_probs=48.6

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh----CCCeEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-G--PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GADNIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g--~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l----g~~~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .|.++||+|+ +  ++|.++++.+...|++ |+.+.++++..+.++++    +....+..|-.+ .+..+.+.+..+ ..
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~-vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~   82 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAE-LAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGK-VW   82 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCE-EEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHh-hc
Confidence            4678999987 3  7999999988889995 66666654222333332    322233333222 334444444333 23


Q ss_pred             CcceEEEeCCC
Q 017426          261 TGIDVSFDCAG  271 (372)
Q Consensus       261 ~~~d~vid~~g  271 (372)
                      +.+|++|++.|
T Consensus        83 g~iD~linnAg   93 (262)
T PRK07984         83 PKFDGFVHSIG   93 (262)
T ss_pred             CCCCEEEECCc
Confidence            57999999886

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=95.71  E-value=0.3  Score=44.40  Aligned_cols=62  Identities=19%  Similarity=0.270  Sum_probs=48.4

Q ss_pred             HHHHH----HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE--ecChhHHHHHHHhCCCeEE
Q 017426          178 GVHAC----RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKEIGADNIV  239 (372)
Q Consensus       178 a~~~l----~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v--~~~~~~~~~~~~lg~~~v~  239 (372)
                      ||.++    +.+.+.||.++||-.. |.+|...+-+|...|++.++++  ..+.+|...++++|+.-+.
T Consensus        87 a~sMi~~Ae~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~  155 (362)
T KOG1252|consen   87 AWSMIEDAEKKGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIIL  155 (362)
T ss_pred             HHHHHHHHHHcCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEe
Confidence            66665    3377999999999876 9999999999999999644444  3345788899999987654

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.71  E-value=0.14  Score=45.85  Aligned_cols=83  Identities=22%  Similarity=0.360  Sum_probs=51.6

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChh----HHHHHHHhCCCeEEecC-CCcccHHHHHHHHHHHcCC
Q 017426          188 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY----RLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       188 ~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~----~~~~~~~lg~~~v~~~~-~~~~~~~~~~~~~~~~~~~  261 (372)
                      -.|+.|||+|+ +++|.+.++=...+|+ +++..+.+.+    ..+..++.|-.+....| .+.++.....++..+. -+
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e-~G  113 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKE-VG  113 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHh-cC
Confidence            37899999987 9999998887778888 5677766654    34444444522222222 2233444333333332 35


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      .+|++++.+|-
T Consensus       114 ~V~ILVNNAGI  124 (300)
T KOG1201|consen  114 DVDILVNNAGI  124 (300)
T ss_pred             CceEEEecccc
Confidence            89999998764

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.71  E-value=0.1  Score=42.55  Aligned_cols=100  Identities=20%  Similarity=0.268  Sum_probs=61.1

Q ss_pred             HHHHHHHh-c-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHH
Q 017426          177 VGVHACRR-A-NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       177 ~a~~~l~~-~-~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~  254 (372)
                      ..+.++.+ . ..-.|.+++|.|=|.+|...++.++.+|+ +|++++.++-+.-.+..-|... .       +    +.+
T Consensus         8 S~~d~i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v-~-------~----~~~   74 (162)
T PF00670_consen    8 SLVDGIMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEV-M-------T----LEE   74 (162)
T ss_dssp             HHHHHHHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EE-E------------HHH
T ss_pred             hHHHHHHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEe-c-------C----HHH
Confidence            34555533 2 34578999999999999999999999999 6899999987766665556532 1       1    222


Q ss_pred             HHHHcCCcceEEEeCCCcHHHH-HHHHHHhccCCEEEEEc
Q 017426          255 IQKAMGTGIDVSFDCAGLNKTM-STALGATCAGGKVCLVG  293 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g  293 (372)
                      .    -...|++|-++|..+.+ ..-+..|+.+-.+...|
T Consensus        75 a----~~~adi~vtaTG~~~vi~~e~~~~mkdgail~n~G  110 (162)
T PF00670_consen   75 A----LRDADIFVTATGNKDVITGEHFRQMKDGAILANAG  110 (162)
T ss_dssp             H----TTT-SEEEE-SSSSSSB-HHHHHHS-TTEEEEESS
T ss_pred             H----HhhCCEEEECCCCccccCHHHHHHhcCCeEEeccC
Confidence            2    25789999999975432 35566777554444444

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK06138 short chain dehydrogenase; Provisional

Probab=95.71  E-value=0.1  Score=46.01  Aligned_cols=82  Identities=23%  Similarity=0.236  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHh--CCC-eEEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI--GAD-NIVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~l--g~~-~v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      .+.++||.|+ |.+|..+++.+...|+ .|+.+.++.++.+. .+.+  +.. ..+..+-.+ .+..+.+.++.+ ..++
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~-~~~~   81 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAA-RWGR   81 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH-HcCC
Confidence            3568999998 9999999998888898 57777677654432 3333  221 222233222 223333333332 2358


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|++|.+.|.
T Consensus        82 id~vi~~ag~   91 (252)
T PRK06138         82 LDVLVNNAGF   91 (252)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>PRK04148 hypothetical protein; Provisional

Probab=95.70  E-value=0.33  Score=38.36  Aligned_cols=88  Identities=13%  Similarity=0.213  Sum_probs=61.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      .++.++++.|.| .|..++..+...|. .|++++.+++..+.++..+...+.+ +-.++++.     +    -.++|+|.
T Consensus        15 ~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~d-Dlf~p~~~-----~----y~~a~liy   82 (134)
T PRK04148         15 GKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVD-DLFNPNLE-----I----YKNAKLIY   82 (134)
T ss_pred             ccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEEC-cCCCCCHH-----H----HhcCCEEE
Confidence            456889999998 88766666667898 6999999999999998888655432 22222211     1    35799999


Q ss_pred             eCCCcHHHHHHHHHHhccCC
Q 017426          268 DCAGLNKTMSTALGATCAGG  287 (372)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~G  287 (372)
                      ..-..++.....++.-+.-|
T Consensus        83 sirpp~el~~~~~~la~~~~  102 (134)
T PRK04148         83 SIRPPRDLQPFILELAKKIN  102 (134)
T ss_pred             EeCCCHHHHHHHHHHHHHcC
Confidence            88887766666666554443

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.70  E-value=0.1  Score=46.06  Aligned_cols=82  Identities=18%  Similarity=0.206  Sum_probs=48.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCCC-eEEecCCC-cccHHHHHHHHHHHcCCcceE
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~d~  265 (372)
                      +.++||+|+ |.+|..++..+...|+++++...+++++.+. ...++.. ..+..|-. ..++.+.+.+..+..+.++|+
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~   84 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITT   84 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeE
Confidence            568999987 9999999999988999644434444444433 3344422 12222222 223344444433333445999


Q ss_pred             EEeCCC
Q 017426          266 SFDCAG  271 (372)
Q Consensus       266 vid~~g  271 (372)
                      +|.+.|
T Consensus        85 li~~ag   90 (253)
T PRK08642         85 VVNNAL   90 (253)
T ss_pred             EEECCC
Confidence            998875

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.70  E-value=0.11  Score=45.74  Aligned_cols=83  Identities=20%  Similarity=0.168  Sum_probs=49.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HH---HHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VA---KEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~---~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      ++.++||.|+ |.+|..++..+...|+++++...++.++.+ ..   +..+... .+..|-.+ .+....+.+..+. .+
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   81 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEE-FG   81 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            4578999987 999999999999999864443455554432 22   2234322 22233222 2233334333322 35


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|.+.|.
T Consensus        82 ~id~vi~~ag~   92 (250)
T PRK08063         82 RLDVFVNNAAS   92 (250)
T ss_pred             CCCEEEECCCC
Confidence            79999998763

>PRK07024 short chain dehydrogenase; Provisional

Probab=95.69  E-value=0.14  Score=45.40  Aligned_cols=81  Identities=20%  Similarity=0.169  Sum_probs=50.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCC---eEEecCCCc-ccHHHHHHHHHHHcCCcc
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD---NIVKVSTNL-QDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~---~v~~~~~~~-~~~~~~~~~~~~~~~~~~  263 (372)
                      +.++||+|+ |.+|..+++.+...|+ .|+++++++++.+.+ +++...   ..+..|-.+ ++..+.+.++.+. .+.+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAA-HGLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHh-CCCC
Confidence            458999987 9999999999988999 577777877665543 333211   122222222 2333333433322 3468


Q ss_pred             eEEEeCCCc
Q 017426          264 DVSFDCAGL  272 (372)
Q Consensus       264 d~vid~~g~  272 (372)
                      |++|++.|.
T Consensus        80 d~lv~~ag~   88 (257)
T PRK07024         80 DVVIANAGI   88 (257)
T ss_pred             CEEEECCCc
Confidence            999998763

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=95.69  E-value=0.14  Score=45.37  Aligned_cols=82  Identities=27%  Similarity=0.447  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHh---CCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~l---g~~-~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .++.+++++++.+. .+++   +.. ..+..|-.+ .++.+.+..+.+ ..+
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~   85 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEK-DIG   85 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHH-hcC
Confidence            4678999987 9999999999988998 57777777655432 2232   322 122233222 223333333322 235


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|+++.+.|.
T Consensus        86 ~id~vi~~ag~   96 (254)
T PRK08085         86 PIDVLINNAGI   96 (254)
T ss_pred             CCCEEEECCCc
Confidence            79999998874

>PLN02780 ketoreductase/ oxidoreductase

Probab=95.67  E-value=0.094  Score=48.48  Aligned_cols=41  Identities=20%  Similarity=0.178  Sum_probs=33.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA  230 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~  230 (372)
                      .|.+++|+|+ +++|.+.++.+...|++ |+.+++++++.+.+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~-Vil~~R~~~~l~~~   93 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLN-LVLVARNPDKLKDV   93 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCC-EEEEECCHHHHHHH
Confidence            5789999998 99999988888888995 77788888776543

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.66  E-value=0.042  Score=49.44  Aligned_cols=117  Identities=21%  Similarity=0.186  Sum_probs=68.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-HhCCCeE-EecCCCcccHHHHHHHHHHHcCC-cce
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADNI-VKVSTNLQDIAEEVEKIQKAMGT-GID  264 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~lg~~~v-~~~~~~~~~~~~~~~~~~~~~~~-~~d  264 (372)
                      .+|++++|.|+|+.+.+++.-+...|++.+.++.++.+|.+.+. .++.... +....        +..+   ... .+|
T Consensus       124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~--------~~~~---~~~~~~d  192 (283)
T COG0169         124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAA--------LADL---EGLEEAD  192 (283)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccc--------cccc---ccccccC
Confidence            46899999999999999999999999888999999888866554 4442221 00000        0001   012 599


Q ss_pred             EEEeCCCcHHHHH-----HHHHHhccCCEEEEEcCCCCCccccchhhhccC-cEEEee
Q 017426          265 VSFDCAGLNKTMS-----TALGATCAGGKVCLVGMGHHEMTVPLTPAAVRE-VDVVGV  316 (372)
Q Consensus       265 ~vid~~g~~~~~~-----~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~i~~~  316 (372)
                      ++|+|++..-...     .....+++.-.+..+-..+. .+++++..-.+. ..+.|.
T Consensus       193 liINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~-~TplL~~A~~~G~~~idGl  249 (283)
T COG0169         193 LLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPL-ETPLLREARAQGAKTIDGL  249 (283)
T ss_pred             EEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCC-CCHHHHHHHHcCCeEECcH
Confidence            9999876431100     01345555555555533333 344444443333 244444

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=95.66  E-value=0.15  Score=44.92  Aligned_cols=81  Identities=17%  Similarity=0.247  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH----HhCC-CeEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGA-DNIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~----~lg~-~~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      ++.++||+|+ |.+|..+++.+...|+ .|+.++++.++...+.    ..+. ..++..+-.+ .+..+.+..+.+ ..+
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~   79 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQ-ALG   79 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH-HcC
Confidence            3678999998 9999999999999998 4677767665544322    2232 2223333222 223333444332 235


Q ss_pred             cceEEEeCCC
Q 017426          262 GIDVSFDCAG  271 (372)
Q Consensus       262 ~~d~vid~~g  271 (372)
                      ++|++|.+.|
T Consensus        80 ~~d~vi~~ag   89 (250)
T TIGR03206        80 PVDVLVNNAG   89 (250)
T ss_pred             CCCEEEECCC
Confidence            7999999886

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.65  E-value=0.13  Score=46.28  Aligned_cols=82  Identities=24%  Similarity=0.259  Sum_probs=49.3

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCeEEEEecCh---hHHH-HHHHhCCCeEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDD---YRLS-VAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga---g~~G~~ai~l~~~~g~~~vv~v~~~~---~~~~-~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+   +++|.++++.+...|++ |+.+.+++   ++.+ +.++++....+..|-.+ ++..+.+.++.+ ..
T Consensus         9 ~~k~~lItGas~~~GIG~aia~~la~~G~~-V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~   86 (272)
T PRK08159          9 AGKRGLILGVANNRSIAWGIAKACRAAGAE-LAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEK-KW   86 (272)
T ss_pred             cCCEEEEECCCCCCcHHHHHHHHHHHCCCE-EEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHH-hc
Confidence            4678999986   58999999999999994 66665553   2222 23344532233333222 233333333332 23


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|+++++.|.
T Consensus        87 g~iD~lv~nAG~   98 (272)
T PRK08159         87 GKLDFVVHAIGF   98 (272)
T ss_pred             CCCcEEEECCcc
Confidence            579999998763

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=95.63  E-value=0.15  Score=45.22  Aligned_cols=81  Identities=32%  Similarity=0.356  Sum_probs=51.5

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCC-eEEecCCCc-ccHHHHHHHHHHHcCCcceE
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~  265 (372)
                      +.++||+|+ |.+|..+++.+...|+ .|+.++++.++.+.+ ++++.. ..+..|-.+ .+..+.+.++.+ ..+++|+
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~   83 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVE-RFGGIDI   83 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH-HcCCCCE
Confidence            568999998 9999999999999999 577777777765543 344422 122223222 233333433332 2357999


Q ss_pred             EEeCCCc
Q 017426          266 SFDCAGL  272 (372)
Q Consensus       266 vid~~g~  272 (372)
                      ++.+.|.
T Consensus        84 li~~ag~   90 (257)
T PRK07067         84 LFNNAAL   90 (257)
T ss_pred             EEECCCc
Confidence            9998763

>PRK06914 short chain dehydrogenase; Provisional

Probab=95.63  E-value=0.16  Score=45.81  Aligned_cols=80  Identities=16%  Similarity=0.180  Sum_probs=49.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCC---CeEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGA---DNIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~---~~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      +.++||+|+ |.+|..++..+...|+ .|+++.+++++.+.+.+    .+.   ..++..|-.+ +++.+ +.+..+ ..
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~-~~   79 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLK-EI   79 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHH-hc
Confidence            567899998 9999999998888998 46777777665543322    221   1222223222 23333 444332 23


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|+++.+.|.
T Consensus        80 ~~id~vv~~ag~   91 (280)
T PRK06914         80 GRIDLLVNNAGY   91 (280)
T ss_pred             CCeeEEEECCcc
Confidence            579999998764

>PRK09242 tropinone reductase; Provisional

Probab=95.62  E-value=0.15  Score=45.27  Aligned_cols=82  Identities=23%  Similarity=0.271  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh-----CCCe-EEecCCCc-ccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI-----GADN-IVKVSTNL-QDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l-----g~~~-v~~~~~~~-~~~~~~~~~~~~~~  259 (372)
                      .+.++||+|+ |.+|..+++.+...|+ .|+++.+++++.+.+ +++     +... .+..|-.+ .+..+.+.++.+. 
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-   85 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH-   85 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH-
Confidence            3678999987 9999999999999999 477777777654433 222     2111 12222222 2333333333322 


Q ss_pred             CCcceEEEeCCCc
Q 017426          260 GTGIDVSFDCAGL  272 (372)
Q Consensus       260 ~~~~d~vid~~g~  272 (372)
                      .+++|++|.+.|.
T Consensus        86 ~g~id~li~~ag~   98 (257)
T PRK09242         86 WDGLHILVNNAGG   98 (257)
T ss_pred             cCCCCEEEECCCC
Confidence            3579999999874

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.57  E-value=0.14  Score=45.40  Aligned_cols=82  Identities=27%  Similarity=0.381  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |.+|..+++.+...|. .|+++.+++++.+.+ ..+   +... .+..+-.+ .+..+.+..+.+ ..+
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~   80 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVE-TFG   80 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH-HcC
Confidence            3578999997 9999999998888898 477777776654432 222   3221 22223222 233333333322 235


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|.+.+.
T Consensus        81 ~~d~vi~~a~~   91 (258)
T PRK12429         81 GVDILVNNAGI   91 (258)
T ss_pred             CCCEEEECCCC
Confidence            79999988763

>PRK07985 oxidoreductase; Provisional

Probab=95.56  E-value=0.35  Score=44.06  Aligned_cols=81  Identities=20%  Similarity=0.211  Sum_probs=47.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecC--hhHHHHH----HHhCCCe-EEecCCCc-ccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD--DYRLSVA----KEIGADN-IVKVSTNL-QDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~--~~~~~~~----~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~  259 (372)
                      .+.++||+|+ +.+|.++++.+...|++ |+.+.++  .++.+.+    +..+... .+..|-.+ ++..+.+.+..+ .
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~  125 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGAD-VAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHK-A  125 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHH-H
Confidence            4678999998 99999999999999995 5655433  2222222    2233221 22223222 223333333332 2


Q ss_pred             CCcceEEEeCCC
Q 017426          260 GTGIDVSFDCAG  271 (372)
Q Consensus       260 ~~~~d~vid~~g  271 (372)
                      .+++|+++.+.|
T Consensus       126 ~g~id~lv~~Ag  137 (294)
T PRK07985        126 LGGLDIMALVAG  137 (294)
T ss_pred             hCCCCEEEECCC
Confidence            357999998776

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.56  E-value=0.061  Score=50.78  Aligned_cols=73  Identities=22%  Similarity=0.353  Sum_probs=56.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      .+.++||+|+|-+|..++..+...|...++++.+.-+|.+ +++++|+..+ .++    +    +...    -..+|+||
T Consensus       177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l~----e----l~~~----l~~~DvVi  243 (414)
T COG0373         177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-ALE----E----LLEA----LAEADVVI  243 (414)
T ss_pred             ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cHH----H----HHHh----hhhCCEEE
Confidence            6789999999999999999999999888888888887765 6788995432 221    1    2222    25799999


Q ss_pred             eCCCcHH
Q 017426          268 DCAGLNK  274 (372)
Q Consensus       268 d~~g~~~  274 (372)
                      -+++.+.
T Consensus       244 ssTsa~~  250 (414)
T COG0373         244 SSTSAPH  250 (414)
T ss_pred             EecCCCc
Confidence            9988763

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.54  E-value=0.21  Score=46.39  Aligned_cols=35  Identities=37%  Similarity=0.513  Sum_probs=30.8

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      ..+|+|.|+|++|..++..+.+.|...+..++.+.
T Consensus        24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            46899999999999999999999998888887753

>PRK08264 short chain dehydrogenase; Validated

Probab=95.53  E-value=0.071  Score=46.67  Aligned_cols=77  Identities=19%  Similarity=0.248  Sum_probs=48.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCC-eEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .+.++||+|+ |.+|..+++.+...|.+.|+++.+++++.+.   .+.. .++..+-.+.   +.+.++.+. -+.+|++
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~---~~~~~~~~~-~~~id~v   77 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDP---ASVAAAAEA-ASDVTIL   77 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCH---HHHHHHHHh-cCCCCEE
Confidence            4578999987 9999999999999998457777777665432   2221 1222222221   123333221 2468999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      |.+.|.
T Consensus        78 i~~ag~   83 (238)
T PRK08264         78 VNNAGI   83 (238)
T ss_pred             EECCCc
Confidence            998876

>PRK07856 short chain dehydrogenase; Provisional

Probab=95.52  E-value=0.12  Score=45.69  Aligned_cols=78  Identities=23%  Similarity=0.196  Sum_probs=48.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCC-eEEecCCC-cccHHHHHHHHHHHcCCcceE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~d~  265 (372)
                      .+.++||+|+ |.+|..+++.+...|+ .|+.+++++++    ...+.. ..+..+-. .+++.+.+..+.+ ..+++|+
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~   78 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVE-RHGRLDV   78 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHH-HcCCCCE
Confidence            4688999987 9999999999988998 57777776654    112211 12222222 2233344444333 2357999


Q ss_pred             EEeCCCc
Q 017426          266 SFDCAGL  272 (372)
Q Consensus       266 vid~~g~  272 (372)
                      +|.+.|.
T Consensus        79 vi~~ag~   85 (252)
T PRK07856         79 LVNNAGG   85 (252)
T ss_pred             EEECCCC
Confidence            9998763

>PLN02253 xanthoxin dehydrogenase

Probab=95.52  E-value=0.13  Score=46.43  Aligned_cols=82  Identities=22%  Similarity=0.301  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCC---CeEEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGA---DNIVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~---~~v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|++++++++..+ ..+.++.   ...+..|-.+ .+..+.+..+.+. .++
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~-~g~   94 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDK-FGT   94 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHH-hCC
Confidence            3678999987 9999999998888998 5777777665443 3334432   1122222222 2333334433332 357


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|++|++.|.
T Consensus        95 id~li~~Ag~  104 (280)
T PLN02253         95 LDIMVNNAGL  104 (280)
T ss_pred             CCEEEECCCc
Confidence            9999998764

>PRK06701 short chain dehydrogenase; Provisional

Probab=95.51  E-value=0.36  Score=43.90  Aligned_cols=82  Identities=20%  Similarity=0.202  Sum_probs=47.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh-hHHH----HHHHhCCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD-YRLS----VAKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~-~~~~----~~~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ |.+|..+++.+...|++ |+.+.+++ +..+    .++..+... .+..|-.+ .++.+.+.+..+. .
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~~-V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~-~  122 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGAD-IAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE-L  122 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence            4678999997 99999999988889995 56665543 2222    222223222 22233222 2233333333322 3


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|.+.|.
T Consensus       123 ~~iD~lI~~Ag~  134 (290)
T PRK06701        123 GRLDILVNNAAF  134 (290)
T ss_pred             CCCCEEEECCcc
Confidence            579999988764

>PRK07832 short chain dehydrogenase; Provisional

Probab=95.50  E-value=0.17  Score=45.47  Aligned_cols=79  Identities=24%  Similarity=0.321  Sum_probs=47.9

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-H---HhCCCeE--EecCCCc-ccHHHHHHHHHHHcCCcc
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGADNI--VKVSTNL-QDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~v--~~~~~~~-~~~~~~~~~~~~~~~~~~  263 (372)
                      +++|+|+ |++|..+++.+...|++ |+.+.+++++.+.. +   ..+...+  +..|-.+ .+..+.+.++.+ ..+++
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~i   79 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAE-LFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHA-AHGSM   79 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHH-hcCCC
Confidence            6899987 99999999999899985 67777776554322 2   2333221  1122222 222333333322 23579


Q ss_pred             eEEEeCCCc
Q 017426          264 DVSFDCAGL  272 (372)
Q Consensus       264 d~vid~~g~  272 (372)
                      |++|++.|.
T Consensus        80 d~lv~~ag~   88 (272)
T PRK07832         80 DVVMNIAGI   88 (272)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK06953 short chain dehydrogenase; Provisional

Probab=95.50  E-value=0.11  Score=45.06  Aligned_cols=77  Identities=27%  Similarity=0.349  Sum_probs=49.5

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcc-cHHHHHHHHHHHcCCcceEEEe
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ-DIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .++||+|+ |.+|..+++.+...|+ .++.+++++++.+.++..+... +..|-.+. ++.+.+.++   .+.++|++|.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~-~~~D~~~~~~v~~~~~~~---~~~~~d~vi~   76 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEA-LALDVADPASVAGLAWKL---DGEALDAAVY   76 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceE-EEecCCCHHHHHHHHHHh---cCCCCCEEEE
Confidence            36899987 9999999988888898 4777778877776666555432 22222222 222222222   2357999999


Q ss_pred             CCCc
Q 017426          269 CAGL  272 (372)
Q Consensus       269 ~~g~  272 (372)
                      +.|.
T Consensus        77 ~ag~   80 (222)
T PRK06953         77 VAGV   80 (222)
T ss_pred             CCCc
Confidence            8764

>PRK08251 short chain dehydrogenase; Provisional

Probab=95.50  E-value=0.18  Score=44.41  Aligned_cols=80  Identities=23%  Similarity=0.280  Sum_probs=49.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-Hh-----CCC-eEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EI-----GAD-NIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~l-----g~~-~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      +.++||+|+ |.+|..+++.+...|. .|+.+++++++.+.+. .+     +.. .++..|-.+ .++.+.+.++.+ ..
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~   79 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRD-EL   79 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHH-Hc
Confidence            468999997 9999998888888898 5777777776654332 21     211 122223222 234444444433 23


Q ss_pred             CcceEEEeCCC
Q 017426          261 TGIDVSFDCAG  271 (372)
Q Consensus       261 ~~~d~vid~~g  271 (372)
                      +++|++|.+.|
T Consensus        80 ~~id~vi~~ag   90 (248)
T PRK08251         80 GGLDRVIVNAG   90 (248)
T ss_pred             CCCCEEEECCC
Confidence            57999999876

>PRK05876 short chain dehydrogenase; Provisional

Probab=95.50  E-value=0.12  Score=46.61  Aligned_cols=82  Identities=27%  Similarity=0.364  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHh---CCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI---GADN-IVKVSTN-LQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~l---g~~~-v~~~~~~-~~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |.+|.++++.+...|++ |+++++++++.+. .+.+   +... .+..|-. ..++.+.+.+..+ ..+
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~-Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g   82 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGAR-VVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFR-LLG   82 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH-HcC
Confidence            4678999987 99999999999999994 6777777655442 2232   3221 2222222 2233333333322 235


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus        83 ~id~li~nAg~   93 (275)
T PRK05876         83 HVDVVFSNAGI   93 (275)
T ss_pred             CCCEEEECCCc
Confidence            79999998873

>TIGR00417 speE spermidine synthase

Probab=95.49  E-value=0.28  Score=44.15  Aligned_cols=99  Identities=16%  Similarity=0.162  Sum_probs=60.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCC-------eEEecCCCcccHHHHHHHHHHHcC
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD-------NIVKVSTNLQDIAEEVEKIQKAMG  260 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~-------~v~~~~~~~~~~~~~~~~~~~~~~  260 (372)
                      +.+++||++|+|. |..+..+++......+.+++.+++-.+.+++.-..       .-+..  ...|..+.+++    ..
T Consensus        71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i--~~~D~~~~l~~----~~  143 (270)
T TIGR00417        71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDL--QIDDGFKFLAD----TE  143 (270)
T ss_pred             CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEE--EECchHHHHHh----CC
Confidence            3456999998754 44556666766566899999998887777663100       00000  01232222322    24


Q ss_pred             CcceEEEeCCC----------cHHHHHHHHHHhccCCEEEEEc
Q 017426          261 TGIDVSFDCAG----------LNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       261 ~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      +.+|+||-...          ..+.++.+.+.|+++|.++...
T Consensus       144 ~~yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~  186 (270)
T TIGR00417       144 NTFDVIIVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQS  186 (270)
T ss_pred             CCccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence            68999974222          1234567889999999998763

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.49  E-value=0.25  Score=42.66  Aligned_cols=35  Identities=31%  Similarity=0.414  Sum_probs=30.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      ...+|+|.|+|++|..+++.+.+.|...+..++.+
T Consensus        27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            34689999999999999999999999888888776

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.47  E-value=0.34  Score=38.84  Aligned_cols=32  Identities=31%  Similarity=0.545  Sum_probs=28.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      +|+|.|+|++|..++..+.+.|...+..++.+
T Consensus         1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            58999999999999999999999888888654

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK12746 short chain dehydrogenase; Provisional

Probab=95.47  E-value=0.4  Score=42.31  Aligned_cols=83  Identities=20%  Similarity=0.329  Sum_probs=48.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHh---CCC-eEEecCCC-cccHHHHHHHHHHHc---
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEI---GAD-NIVKVSTN-LQDIAEEVEKIQKAM---  259 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~l---g~~-~v~~~~~~-~~~~~~~~~~~~~~~---  259 (372)
                      +.+++|+|+ |.+|..+++.+...|.++++...++.++.+ ..+.+   +.. ..+..|-. .+++.+.+.+..+..   
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~   85 (254)
T PRK12746          6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIR   85 (254)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccc
Confidence            578999998 999999999998899854343456555433 22333   221 12222222 223333343332211   


Q ss_pred             --CCcceEEEeCCCc
Q 017426          260 --GTGIDVSFDCAGL  272 (372)
Q Consensus       260 --~~~~d~vid~~g~  272 (372)
                        ..++|++|.+.|.
T Consensus        86 ~~~~~id~vi~~ag~  100 (254)
T PRK12746         86 VGTSEIDILVNNAGI  100 (254)
T ss_pred             cCCCCccEEEECCCC
Confidence              1469999988764

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=95.47  E-value=0.17  Score=45.12  Aligned_cols=81  Identities=16%  Similarity=0.148  Sum_probs=48.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE-ecChhHHHH-HHH----hCCC-eEEecCCCc-ccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSV-AKE----IGAD-NIVKVSTNL-QDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v-~~~~~~~~~-~~~----lg~~-~v~~~~~~~-~~~~~~~~~~~~~~  259 (372)
                      .+.++||+|+ +++|.+++..+...|++ |+.+ .+++++.+. .++    .+.. ..+..|-.+ ++..+.+.++.+. 
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-   84 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVN-IAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED-   84 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh-
Confidence            4679999998 99999999999999995 5554 344444332 222    2322 223333222 2333334333322 


Q ss_pred             CCcceEEEeCCC
Q 017426          260 GTGIDVSFDCAG  271 (372)
Q Consensus       260 ~~~~d~vid~~g  271 (372)
                      .+.+|+++++.|
T Consensus        85 ~g~id~lv~nAg   96 (260)
T PRK08416         85 FDRVDFFISNAI   96 (260)
T ss_pred             cCCccEEEECcc
Confidence            357999998875

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=95.46  E-value=0.62  Score=40.38  Aligned_cols=113  Identities=12%  Similarity=-0.001  Sum_probs=62.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh-hHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD-YRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      .+.+|||.|+|.++.-=++.+...|++ |.++...- +....+.+.+....+.     .++...  .     -.++++||
T Consensus        24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA~-VtVVap~i~~el~~l~~~~~i~~~~-----r~~~~~--d-----l~g~~LVi   90 (223)
T PRK05562         24 NKIKVLIIGGGKAAFIKGKTFLKKGCY-VYILSKKFSKEFLDLKKYGNLKLIK-----GNYDKE--F-----IKDKHLIV   90 (223)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCCCHHHHHHHhCCCEEEEe-----CCCChH--H-----hCCCcEEE
Confidence            467999999999998888888889985 55553321 1222222223222221     111110  1     15789999


Q ss_pred             eCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccC-cEEE
Q 017426          268 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVRE-VDVV  314 (372)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~i~  314 (372)
                      -|++.++.-.......+..+.++.....+...++-......+. +++-
T Consensus        91 aATdD~~vN~~I~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~Ia  138 (223)
T PRK05562         91 IATDDEKLNNKIRKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFA  138 (223)
T ss_pred             ECCCCHHHHHHHHHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEE
Confidence            9999874444444555555766665443333444444433333 4443

>PRK06181 short chain dehydrogenase; Provisional

Probab=95.43  E-value=0.2  Score=44.65  Aligned_cols=80  Identities=25%  Similarity=0.362  Sum_probs=49.1

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HH---HhCCCe-EEecCCCc-ccHHHHHHHHHHHcCCcc
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AK---EIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~---~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~~  263 (372)
                      .++||.|+ |.+|..+++.+...|. .|+.+++++++.+. .+   ..+... ++..|-.+ ..+...+.+..+. .+++
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~i   79 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVAR-FGGI   79 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cCCC
Confidence            57999998 9999999999989998 57777777655432 22   223221 22222222 2233334333321 3579


Q ss_pred             eEEEeCCCc
Q 017426          264 DVSFDCAGL  272 (372)
Q Consensus       264 d~vid~~g~  272 (372)
                      |++|.+.|.
T Consensus        80 d~vi~~ag~   88 (263)
T PRK06181         80 DILVNNAGI   88 (263)
T ss_pred             CEEEECCCc
Confidence            999998764

>PRK06197 short chain dehydrogenase; Provisional

Probab=95.42  E-value=0.13  Score=47.16  Aligned_cols=82  Identities=22%  Similarity=0.287  Sum_probs=49.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHh-----CCC-eEEecCCCc-ccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI-----GAD-NIVKVSTNL-QDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~l-----g~~-~v~~~~~~~-~~~~~~~~~~~~~~  259 (372)
                      .+.++||.|+ |.+|..+++.+...|+ .|+.+.++.++.+. .+.+     +.. ..+..|-.+ ++..+.+.++.+ .
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~-~   92 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA-A   92 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh-h
Confidence            5678999987 9999999998888898 56677777665432 2222     111 122223222 223333333322 2


Q ss_pred             CCcceEEEeCCCc
Q 017426          260 GTGIDVSFDCAGL  272 (372)
Q Consensus       260 ~~~~d~vid~~g~  272 (372)
                      .+++|++|.+.|.
T Consensus        93 ~~~iD~li~nAg~  105 (306)
T PRK06197         93 YPRIDLLINNAGV  105 (306)
T ss_pred             CCCCCEEEECCcc
Confidence            3579999998863

>PRK06114 short chain dehydrogenase; Provisional

Probab=95.40  E-value=0.19  Score=44.50  Aligned_cols=82  Identities=16%  Similarity=0.260  Sum_probs=49.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChh-H-HHHHH---HhCCC-eEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY-R-LSVAK---EIGAD-NIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~-~-~~~~~---~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ +.+|.++++.+...|++ |++++++++ . .+.++   ..+.. ..+..|-.+ .+..+.+.+..+. .
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~   84 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGAD-VALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE-L   84 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4678999987 99999999999999994 666666542 2 22222   23422 122223222 2333444443332 3


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus        85 g~id~li~~ag~   96 (254)
T PRK06114         85 GALTLAVNAAGI   96 (254)
T ss_pred             CCCCEEEECCCC
Confidence            679999998874

>PRK08263 short chain dehydrogenase; Provisional

Probab=95.39  E-value=0.2  Score=44.99  Aligned_cols=81  Identities=23%  Similarity=0.200  Sum_probs=50.5

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH-hCCC-eEEecCCC-cccHHHHHHHHHHHcCCcceE
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~-lg~~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~d~  265 (372)
                      +.++||+|+ |.+|..+++.+...|. .|+.+++++++.+.+.+ ++.. ..+..+-. ..++.+.+..+.+ ..+++|+
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~~d~   80 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVE-HFGRLDI   80 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHH-HcCCCCE
Confidence            457999987 9999999998888898 57777787766554433 3321 12222222 2233333333332 2357999


Q ss_pred             EEeCCCc
Q 017426          266 SFDCAGL  272 (372)
Q Consensus       266 vid~~g~  272 (372)
                      +|.+.|.
T Consensus        81 vi~~ag~   87 (275)
T PRK08263         81 VVNNAGY   87 (275)
T ss_pred             EEECCCC
Confidence            9998874

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=95.39  E-value=0.33  Score=41.87  Aligned_cols=104  Identities=21%  Similarity=0.368  Sum_probs=69.8

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHHHc
Q 017426          185 ANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       185 ~~~~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      ++.....+||=+|. .+|..++.+|..+. -.++++++.++++.+.+++    .|....+..-.. .+..+.+.+   ..
T Consensus        55 ~~~~~~k~iLEiGT-~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~-gdal~~l~~---~~  129 (219)
T COG4122          55 ARLSGPKRILEIGT-AIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG-GDALDVLSR---LL  129 (219)
T ss_pred             HHhcCCceEEEeec-ccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec-CcHHHHHHh---cc
Confidence            44456778888874 35788888888765 2268999999998877655    566553221111 355555544   12


Q ss_pred             CCcceEEE-eCC--CcHHHHHHHHHHhccCCEEEEEc
Q 017426          260 GTGIDVSF-DCA--GLNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       260 ~~~~d~vi-d~~--g~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      .+.||.|| |+.  ..+..++.+++.|+++|-++.=.
T Consensus       130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN  166 (219)
T COG4122         130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADN  166 (219)
T ss_pred             CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence            57899998 443  22457889999999999877643

>PRK06398 aldose dehydrogenase; Validated

Probab=95.39  E-value=0.099  Score=46.57  Aligned_cols=76  Identities=14%  Similarity=0.277  Sum_probs=47.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCc-ccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .|.++||+|+ +.+|.+++..+...|+ .|+.+++++.+..     . ...+..|-.+ .+..+.+.+..+ ..+++|++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~-~~~~~~D~~~~~~i~~~~~~~~~-~~~~id~l   76 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----D-VDYFKVDVSNKEQVIKGIDYVIS-KYGRIDIL   76 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----c-eEEEEccCCCHHHHHHHHHHHHH-HcCCCCEE
Confidence            3678999998 9999999999999999 5677766654321     1 1122222222 233344444333 23579999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      |++.|.
T Consensus        77 i~~Ag~   82 (258)
T PRK06398         77 VNNAGI   82 (258)
T ss_pred             EECCCC
Confidence            998764

>PRK09186 flagellin modification protein A; Provisional

Probab=95.39  E-value=0.15  Score=45.21  Aligned_cols=81  Identities=23%  Similarity=0.354  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHh----CCCe--EEecCCC-cccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEI----GADN--IVKVSTN-LQDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~l----g~~~--v~~~~~~-~~~~~~~~~~~~~~~  259 (372)
                      .+.++||.|+ |.+|..++..+...|++ |+.+.+++++.+ .++++    +...  ++..|-. ..++.+.+.+..+ .
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~-~   80 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGI-VIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAE-K   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHH-H
Confidence            4678999998 99999999999999994 677777766544 33333    2211  1222322 2233344444332 2


Q ss_pred             CCcceEEEeCCC
Q 017426          260 GTGIDVSFDCAG  271 (372)
Q Consensus       260 ~~~~d~vid~~g  271 (372)
                      .+++|++|.+.+
T Consensus        81 ~~~id~vi~~A~   92 (256)
T PRK09186         81 YGKIDGAVNCAY   92 (256)
T ss_pred             cCCccEEEECCc
Confidence            357999999875

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.39  E-value=0.25  Score=45.97  Aligned_cols=34  Identities=38%  Similarity=0.577  Sum_probs=30.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      ..+|+|.|+|++|..+++.+.+.|...+..++.+
T Consensus        24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4689999999999999999999999888988875

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.38  E-value=0.56  Score=41.26  Aligned_cols=104  Identities=16%  Similarity=0.170  Sum_probs=59.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHH-H---HHHHhCCCe-EEecCCC-cccHHHHHHHHHHHcCCc
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRL-S---VAKEIGADN-IVKVSTN-LQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~-~---~~~~lg~~~-v~~~~~~-~~~~~~~~~~~~~~~~~~  262 (372)
                      +.++||.|+ |.+|..+++-+...|++.++...++.++. +   .++..+... .+..+-. ..++...+.++.+. -++
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   84 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR-YGV   84 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH-cCC
Confidence            578999987 99999999988889996444443333322 2   222333321 2222221 22233334443332 357


Q ss_pred             ceEEEeCCCc----------HH---------------HHHHHHHHhccCCEEEEEcC
Q 017426          263 IDVSFDCAGL----------NK---------------TMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       263 ~d~vid~~g~----------~~---------------~~~~~~~~l~~~G~~v~~g~  294 (372)
                      +|.+|.+.|.          .+               ..+.+.+.++..|+++.++.
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS  141 (252)
T PRK06077         85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIAS  141 (252)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcc
Confidence            9999998873          11               12234555667788888864

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=95.38  E-value=0.21  Score=44.22  Aligned_cols=82  Identities=17%  Similarity=0.233  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-H---HhCCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~---~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||.|+ +.+|..++..+...|++ ++.+++++++.+.+ .   ..+.. ..+..|-.+ ++..+.+..+.+ ..+
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~-vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~-~~~   87 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGAS-VVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALS-KLG   87 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-HcC
Confidence            3689999987 99999999988899995 66666666654432 2   22322 122233222 223333333332 235


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|+++.+.|.
T Consensus        88 ~~d~li~~ag~   98 (255)
T PRK06113         88 KVDILVNNAGG   98 (255)
T ss_pred             CCCEEEECCCC
Confidence            79999998763

>PRK07340 ornithine cyclodeaminase; Validated

Probab=95.38  E-value=0.15  Score=46.79  Aligned_cols=95  Identities=17%  Similarity=0.133  Sum_probs=63.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEecChhHHH-HHHHhCCC--eEEecCCCcccHHHHHHHHHHHcCCcc
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARA-FGAPRIVIVDVDDYRLS-VAKEIGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~-~g~~~vv~v~~~~~~~~-~~~~lg~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      ....+++|+|+|..|.+.+..+.. .+.+.+.+.++++++.+ +++.+...  .+. +    .+..+.+        ..+
T Consensus       123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~----~~~~~av--------~~a  189 (304)
T PRK07340        123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P----LDGEAIP--------EAV  189 (304)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E----CCHHHHh--------hcC
Confidence            456789999999999998888764 78888899999887755 44555421  111 1    2222222        479


Q ss_pred             eEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC
Q 017426          264 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH  297 (372)
Q Consensus       264 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  297 (372)
                      |+|+.|+.+...+-..  .++++-++..+|...+
T Consensus       190 DiVitaT~s~~Pl~~~--~~~~g~hi~~iGs~~p  221 (304)
T PRK07340        190 DLVVTATTSRTPVYPE--AARAGRLVVAVGAFTP  221 (304)
T ss_pred             CEEEEccCCCCceeCc--cCCCCCEEEecCCCCC
Confidence            9999998876543333  3788777778875443

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=95.37  E-value=0.19  Score=44.59  Aligned_cols=82  Identities=17%  Similarity=0.231  Sum_probs=49.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChh--HHHHHHHhCCC-eEEecCCC-cccHHHHHHHHHHHcCCcc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY--RLSVAKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~--~~~~~~~lg~~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~  263 (372)
                      .|.++||+|+ |.+|.++++.+...|++ |+.++.++.  ..+.++.++.. ..+..+-. .++..+.+.+..+. .+++
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~   86 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCD-IVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAE-FGHI   86 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hCCC
Confidence            3678999987 99999999999999995 666654432  22333344422 12222322 22334444444332 3579


Q ss_pred             eEEEeCCCc
Q 017426          264 DVSFDCAGL  272 (372)
Q Consensus       264 d~vid~~g~  272 (372)
                      |++|++.|.
T Consensus        87 D~li~~Ag~   95 (253)
T PRK08993         87 DILVNNAGL   95 (253)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK06482 short chain dehydrogenase; Provisional

Probab=95.36  E-value=0.21  Score=44.91  Aligned_cols=80  Identities=20%  Similarity=0.160  Sum_probs=50.3

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH-hCCC-eEEecCCC-cccHHHHHHHHHHHcCCcceEE
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~-lg~~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .++||+|+ |.+|..+++.+...|. .|+++.+++++.+.+++ .+.. .++..|-. ..++.+.+.++.+ ..+++|++
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~v   80 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFA-ALGRIDVV   80 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHH-HcCCCCEE
Confidence            47999987 9999999998888898 57777788776655443 2321 12222222 2223333433332 23579999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      |.+.|.
T Consensus        81 i~~ag~   86 (276)
T PRK06482         81 VSNAGY   86 (276)
T ss_pred             EECCCC
Confidence            998764

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=95.36  E-value=0.13  Score=46.71  Aligned_cols=45  Identities=16%  Similarity=0.211  Sum_probs=34.1

Q ss_pred             HHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          180 HACRRANI-GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       180 ~~l~~~~~-~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      .+++...+ -.+.++||+|+|+.+.+++..+...|++.+.++.+++
T Consensus       113 ~~l~~~~~~~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~  158 (288)
T PRK12749        113 RAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD  158 (288)
T ss_pred             HHHHhcCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            34544333 3567899999988899877777788998898998874

>PRK06720 hypothetical protein; Provisional

Probab=95.35  E-value=0.33  Score=40.29  Aligned_cols=82  Identities=23%  Similarity=0.322  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HH---hCCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+..++|.|+ +++|...+..+...|+ .|+++++++++.+.. ++   .+... .+..+-.+ +++.+.+.+..+ ..+
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~-~~G   92 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLN-AFS   92 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-HcC
Confidence            4678899987 8899999988888898 577777776554322 22   34322 23333221 233333333332 235


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      .+|+++++.|.
T Consensus        93 ~iDilVnnAG~  103 (169)
T PRK06720         93 RIDMLFQNAGL  103 (169)
T ss_pred             CCCEEEECCCc
Confidence            78999998774

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=95.34  E-value=0.18  Score=51.63  Aligned_cols=82  Identities=26%  Similarity=0.362  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh----CCCe--EEecCCCc-ccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GADN--IVKVSTNL-QDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~--v~~~~~~~-~~~~~~~~~~~~~~  259 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|++++++.++.+.+ +.+    +...  .+..+-.+ .++.+.+.+..+. 
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~-  490 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA-  490 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh-
Confidence            4678999987 9999999999988999 577777877655433 222    3211  22222222 2333344433322 


Q ss_pred             CCcceEEEeCCCc
Q 017426          260 GTGIDVSFDCAGL  272 (372)
Q Consensus       260 ~~~~d~vid~~g~  272 (372)
                      .+++|++|++.|.
T Consensus       491 ~g~iDilV~nAG~  503 (676)
T TIGR02632       491 YGGVDIVVNNAGI  503 (676)
T ss_pred             cCCCcEEEECCCC
Confidence            3589999998874

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=95.32  E-value=0.24  Score=43.82  Aligned_cols=82  Identities=15%  Similarity=0.239  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HH---HhCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AK---EIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~---~lg~~-~v~~~~~~-~~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||.|+ +.+|..+++.+...|+ .|+.+.+++++.+. .+   +.+.. ..+..+-. ..++.+.+.+... ..+
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~   87 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDA-EHG   87 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH-hcC
Confidence            4789999987 9999999998888999 57777777655332 22   23321 22222322 2233334444332 235


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|.+|.+.|.
T Consensus        88 ~id~vi~~ag~   98 (256)
T PRK06124         88 RLDILVNNVGA   98 (256)
T ss_pred             CCCEEEECCCC
Confidence            79999998774

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.30  E-value=0.25  Score=41.23  Aligned_cols=33  Identities=30%  Similarity=0.361  Sum_probs=29.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      +|+|.|+|++|..+++.+.+.|...+..++.+.
T Consensus         1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            589999999999999999999998888887664

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=95.30  E-value=0.36  Score=41.64  Aligned_cols=102  Identities=19%  Similarity=0.137  Sum_probs=63.0

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHH
Q 017426          180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKI  255 (372)
Q Consensus       180 ~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~  255 (372)
                      .+++..+++++++||-.|+|. |..+..+++..+  .+++++.+++..+.+++    ++...+.....   +..+.+.  
T Consensus        69 ~l~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~~--~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~~~--  140 (212)
T PRK00312         69 RMTELLELKPGDRVLEIGTGS-GYQAAVLAHLVR--RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHG---DGWKGWP--  140 (212)
T ss_pred             HHHHhcCCCCCCEEEEECCCc-cHHHHHHHHHhC--EEEEEeCCHHHHHHHHHHHHHCCCCceEEEEC---CcccCCC--
Confidence            344567788999999998743 455555555533  68999998877665543    45433221111   1111110  


Q ss_pred             HHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEE
Q 017426          256 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       256 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  292 (372)
                         ..+.||+|+.............+.|+++|+++..
T Consensus       141 ---~~~~fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~  174 (212)
T PRK00312        141 ---AYAPFDRILVTAAAPEIPRALLEQLKEGGILVAP  174 (212)
T ss_pred             ---cCCCcCEEEEccCchhhhHHHHHhcCCCcEEEEE
Confidence               1257999986555445566788899999998764

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=95.28  E-value=0.22  Score=43.96  Aligned_cols=80  Identities=26%  Similarity=0.391  Sum_probs=49.5

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCe-EEecCCC-cccHHHHHHHHHHHcCCcc
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-v~~~~~~-~~~~~~~~~~~~~~~~~~~  263 (372)
                      .++||+|+ |.+|..++..+...|. .|+++++++++.+.+.+    .+... .+..+-. .+++.+.+.++.+. .+++
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~   79 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAE-FGGL   79 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh-cCCC
Confidence            57999998 9999999999888999 57777787766554432    22221 2222222 23343434343322 3568


Q ss_pred             eEEEeCCCc
Q 017426          264 DVSFDCAGL  272 (372)
Q Consensus       264 d~vid~~g~  272 (372)
                      |++|.+.+.
T Consensus        80 d~vi~~a~~   88 (255)
T TIGR01963        80 DILVNNAGI   88 (255)
T ss_pred             CEEEECCCC
Confidence            999987653

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07074 short chain dehydrogenase; Provisional

Probab=95.28  E-value=0.24  Score=43.87  Aligned_cols=81  Identities=25%  Similarity=0.318  Sum_probs=50.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCCC--eEEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGAD--NIVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~~--~v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      +.++||+|+ |.+|..++..+...|+ .|+.+++++++.+. .+.+...  ..+..+-.+ +++...+.++.+. .+++|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~d   79 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAE-RGPVD   79 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH-cCCCC
Confidence            468999998 9999999998888898 57777777766543 3333211  122222222 2233334443332 24799


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|.+.|.
T Consensus        80 ~vi~~ag~   87 (257)
T PRK07074         80 VLVANAGA   87 (257)
T ss_pred             EEEECCCC
Confidence            99998864

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=95.27  E-value=0.32  Score=42.61  Aligned_cols=108  Identities=22%  Similarity=0.352  Sum_probs=73.7

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHHH
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      .....++|++||=.|+| +|-.+..+++..|-..|++++.+++-++.+++    .|...+--...+.+.       +. .
T Consensus        45 ~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~-------LP-f  115 (238)
T COG2226          45 SLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAEN-------LP-F  115 (238)
T ss_pred             HhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhh-------CC-C
Confidence            34566699999988654 58999999999886689999999998877654    222221101111111       10 1


Q ss_pred             cCCcceEEEeCCCc------HHHHHHHHHHhccCCEEEEEcCCCCCc
Q 017426          259 MGTGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVGMGHHEM  299 (372)
Q Consensus       259 ~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~~~~~~  299 (372)
                      ....||+|.-+.|-      +..+..+.+.|+|+|+++.+.+..+..
T Consensus       116 ~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p~~  162 (238)
T COG2226         116 PDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKPDN  162 (238)
T ss_pred             CCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCCCc
Confidence            24678988766554      357888999999999999998766543

>PRK12747 short chain dehydrogenase; Provisional

Probab=95.26  E-value=0.6  Score=41.21  Aligned_cols=37  Identities=22%  Similarity=0.138  Sum_probs=28.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE-ecChhH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYR  226 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v-~~~~~~  226 (372)
                      .+.++||+|+ +.+|.++++.+...|++ |+++ .+++++
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~   41 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGAL-VAIHYGNRKEE   41 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCe-EEEEcCCCHHH
Confidence            3678999987 99999999999999995 5544 344333

>PRK06179 short chain dehydrogenase; Provisional

Probab=95.24  E-value=0.15  Score=45.59  Aligned_cols=78  Identities=21%  Similarity=0.284  Sum_probs=49.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCC-CcccHHHHHHHHHHHcCCcceEEE
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      +.+++|+|+ |.+|..+++.+...|+ .|+++.+++++.+..  .+.. ++..|- +.+++.+.+....+. .+.+|++|
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~~-~~~~D~~d~~~~~~~~~~~~~~-~g~~d~li   78 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGVE-LLELDVTDDASVQAAVDEVIAR-AGRIDVLV   78 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCCe-eEEeecCCHHHHHHHHHHHHHh-CCCCCEEE
Confidence            467999998 9999999999888998 477777776554321  1222 222222 223444445444332 35799999


Q ss_pred             eCCCc
Q 017426          268 DCAGL  272 (372)
Q Consensus       268 d~~g~  272 (372)
                      ++.|.
T Consensus        79 ~~ag~   83 (270)
T PRK06179         79 NNAGV   83 (270)
T ss_pred             ECCCC
Confidence            99874

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=95.23  E-value=0.22  Score=43.77  Aligned_cols=82  Identities=20%  Similarity=0.224  Sum_probs=48.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH----HHHhCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV----AKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~----~~~lg~~-~v~~~~~~-~~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |.+|..++..+...|+ .|+++.++.++...    ++..+.. ..+..+-. ..++.+.+.+..+ ..+
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~   82 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVE-DFG   82 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-HhC
Confidence            3578999997 9999999998888898 57777777554332    2222321 12222222 2223333333322 135


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|.+.+.
T Consensus        83 ~~d~vi~~ag~   93 (251)
T PRK12826         83 RLDILVANAGI   93 (251)
T ss_pred             CCCEEEECCCC
Confidence            79999988754

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.22  E-value=0.26  Score=43.42  Aligned_cols=34  Identities=29%  Similarity=0.483  Sum_probs=29.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      +.+|+|.|+|++|..+++.+.+.|...+..++.+
T Consensus        24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            4689999999999999999999999888887543

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK09134 short chain dehydrogenase; Provisional

Probab=95.21  E-value=0.24  Score=43.97  Aligned_cols=83  Identities=22%  Similarity=0.203  Sum_probs=47.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHh---CCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEI---GADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~l---g~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||.|+ |.+|..+++.+...|+++++...++.++.+ ..+.+   +... .+..|-.+ .+..+.+.+..+. .+
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~-~~   86 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA-LG   86 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            4668999998 999999999988899854444444444433 22222   3321 22223222 2233333333222 35


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|.+.|.
T Consensus        87 ~iD~vi~~ag~   97 (258)
T PRK09134         87 PITLLVNNASL   97 (258)
T ss_pred             CCCEEEECCcC
Confidence            79999998864

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.17  E-value=0.26  Score=43.14  Aligned_cols=82  Identities=22%  Similarity=0.280  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH----HHhCCCeEE-ecCCC-cccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADNIV-KVSTN-LQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~----~~lg~~~v~-~~~~~-~~~~~~~~~~~~~~~~~  261 (372)
                      ++.++||+|+ |.+|..+++.+...|.+ |+++.+++++.+.+    +..+....+ ..|-. ..++.+.+.++.. ..+
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   81 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAK-VVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVE-AFG   81 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH-HhC
Confidence            3568999998 99999999999889995 78887877664432    223432221 12221 2233344433322 135


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|.+|.+.|.
T Consensus        82 ~id~vi~~ag~   92 (246)
T PRK05653         82 ALDILVNNAGI   92 (246)
T ss_pred             CCCEEEECCCc
Confidence            78999998754

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.16  E-value=0.42  Score=37.39  Aligned_cols=90  Identities=22%  Similarity=0.218  Sum_probs=48.9

Q ss_pred             EEEEECC-CHHHHHHHHHHHH-cCCCeEEEEecChh---HHHHHHHhCC--CeEEecCCCcccHHHHHHHHHHHcCCcce
Q 017426          192 NVLIMGA-GPIGLVTMLAARA-FGAPRIVIVDVDDY---RLSVAKEIGA--DNIVKVSTNLQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~-~g~~~vv~v~~~~~---~~~~~~~lg~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~d  264 (372)
                      +|.|+|+ |-+|+.+++.+.. .+.+.+-+++++++   ..+.-+-.|.  ..+..+    .+    +.++.    ..+|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~----~~----l~~~~----~~~D   69 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT----DD----LEELL----EEAD   69 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEB----S-----HHHHT----TH-S
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccc----hh----HHHhc----ccCC
Confidence            6889999 9999999999998 67866666666651   1111111121  111111    12    22232    3488


Q ss_pred             EEEeCCCcHHHHHHHHHHhccCCEEEEEcC
Q 017426          265 VSFDCAGLNKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       265 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      ++||++. ++.....++.+...|.-+.+|.
T Consensus        70 VvIDfT~-p~~~~~~~~~~~~~g~~~ViGT   98 (124)
T PF01113_consen   70 VVIDFTN-PDAVYDNLEYALKHGVPLVIGT   98 (124)
T ss_dssp             EEEEES--HHHHHHHHHHHHHHT-EEEEE-
T ss_pred             EEEEcCC-hHHhHHHHHHHHhCCCCEEEEC
Confidence            8888884 4455555555544566555554

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK07791 short chain dehydrogenase; Provisional

Probab=95.15  E-value=0.23  Score=45.00  Aligned_cols=82  Identities=29%  Similarity=0.338  Sum_probs=48.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh---------hH-HHHHHHh---CCCe-EEecCCCc-ccHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD---------YR-LSVAKEI---GADN-IVKVSTNL-QDIAEEV  252 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~---------~~-~~~~~~l---g~~~-v~~~~~~~-~~~~~~~  252 (372)
                      .+.++||+|+ +++|.++++.+...|++ +++++++.         ++ .+..+++   +... .+..|-.+ ++..+.+
T Consensus         5 ~~k~~lITGas~GIG~aia~~la~~G~~-vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          5 DGRVVIVTGAGGGIGRAHALAFAAEGAR-VVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            5778999987 99999999988889995 55554432         22 2233333   3221 22222222 2333344


Q ss_pred             HHHHHHcCCcceEEEeCCCc
Q 017426          253 EKIQKAMGTGIDVSFDCAGL  272 (372)
Q Consensus       253 ~~~~~~~~~~~d~vid~~g~  272 (372)
                      .+..+. .+.+|++|++.|.
T Consensus        84 ~~~~~~-~g~id~lv~nAG~  102 (286)
T PRK07791         84 DAAVET-FGGLDVLVNNAGI  102 (286)
T ss_pred             HHHHHh-cCCCCEEEECCCC
Confidence            443332 3579999998774

>PRK06125 short chain dehydrogenase; Provisional

Probab=95.15  E-value=0.24  Score=44.03  Aligned_cols=79  Identities=27%  Similarity=0.343  Sum_probs=49.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh----CCC-eEEecCCCcccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GAD-NIVKVSTNLQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l----g~~-~v~~~~~~~~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||.|+ +++|..+++.+...|+ .|+++++++++.+.+ +++    +.. ..+..|-.+.   +.+.++.+. -+
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~---~~~~~~~~~-~g   80 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSP---EAREQLAAE-AG   80 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCH---HHHHHHHHH-hC
Confidence            3679999988 9999999999989999 577777777655432 222    221 2222232221   223333322 25


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      .+|++|.+.|.
T Consensus        81 ~id~lv~~ag~   91 (259)
T PRK06125         81 DIDILVNNAGA   91 (259)
T ss_pred             CCCEEEECCCC
Confidence            79999998774

>PRK07775 short chain dehydrogenase; Provisional

Probab=95.14  E-value=0.27  Score=44.17  Aligned_cols=81  Identities=17%  Similarity=0.167  Sum_probs=47.7

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH----HHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      ..++||+|+ |.+|..+++.+...|+ .|+++.++.++....    +..+... .+..|-.+ ++..+.+.+..+ ..++
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~~   87 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEE-ALGE   87 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-hcCC
Confidence            457899997 9999999998888999 566666666543322    2223321 22223222 223333333222 2357


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|++|.+.|.
T Consensus        88 id~vi~~Ag~   97 (274)
T PRK07775         88 IEVLVSGAGD   97 (274)
T ss_pred             CCEEEECCCc
Confidence            9999998764

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=95.14  E-value=0.16  Score=46.22  Aligned_cols=36  Identities=22%  Similarity=0.369  Sum_probs=31.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      .+.+++|+|+|++|.+++..+...|++.|+++.++.
T Consensus       125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            467899999999999999888899998788888875

>PRK06523 short chain dehydrogenase; Provisional

Probab=95.13  E-value=0.17  Score=44.98  Aligned_cols=76  Identities=18%  Similarity=0.199  Sum_probs=47.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC-CeEEecCCCcc-cHHHHHHHHHHHcCCcceE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA-DNIVKVSTNLQ-DIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~-~~v~~~~~~~~-~~~~~~~~~~~~~~~~~d~  265 (372)
                      +|.++||+|+ |.+|..+++.+...|+ .|+++.++.+..     .+. ...+..|-.+. +..+.+.++.+ ..+++|+
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~   80 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD-----LPEGVEFVAADLTTAEGCAAVARAVLE-RLGGVDI   80 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh-----cCCceeEEecCCCCHHHHHHHHHHHHH-HcCCCCE
Confidence            4789999997 9999999999988999 477776665431     111 11222222222 23333333322 2357999


Q ss_pred             EEeCCC
Q 017426          266 SFDCAG  271 (372)
Q Consensus       266 vid~~g  271 (372)
                      +|++.|
T Consensus        81 vi~~ag   86 (260)
T PRK06523         81 LVHVLG   86 (260)
T ss_pred             EEECCc
Confidence            999887

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=95.12  E-value=0.32  Score=41.33  Aligned_cols=76  Identities=28%  Similarity=0.396  Sum_probs=48.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh----CCCeEEecCCCcccHHHHHHHHHHHcCCc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GADNIVKVSTNLQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~v~~~~~~~~~~~~~~~~~~~~~~~~  262 (372)
                      .+.+++|.|+ |.+|..++..+...|. .++.+.++.++.+.+ +.+    +.. +...+.  .+.. .+.+..    .+
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~-~~~~~~--~~~~-~~~~~~----~~   97 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEG-VGAVET--SDDA-ARAAAI----KG   97 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCc-EEEeeC--CCHH-HHHHHH----hc
Confidence            5679999997 9999998888888887 677777877765543 333    222 211111  1111 222222    47


Q ss_pred             ceEEEeCCCcH
Q 017426          263 IDVSFDCAGLN  273 (372)
Q Consensus       263 ~d~vid~~g~~  273 (372)
                      +|+||.+++..
T Consensus        98 ~diVi~at~~g  108 (194)
T cd01078          98 ADVVFAAGAAG  108 (194)
T ss_pred             CCEEEECCCCC
Confidence            89999988765

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PLN03139 formate dehydrogenase; Provisional

Probab=95.11  E-value=0.29  Score=46.25  Aligned_cols=91  Identities=20%  Similarity=0.227  Sum_probs=61.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .|.+|.|+|.|.+|+.+++.++.+|. .|++.+++....+..+..|+..+       .+    +.++.    ...|+|+-
T Consensus       198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~-------~~----l~ell----~~sDvV~l  261 (386)
T PLN03139        198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE-------ED----LDAML----PKCDVVVI  261 (386)
T ss_pred             CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec-------CC----HHHHH----hhCCEEEE
Confidence            57799999999999999999999999 57778776544444455554321       12    22332    35788887


Q ss_pred             CCCcHHHHH-----HHHHHhccCCEEEEEcCC
Q 017426          269 CAGLNKTMS-----TALGATCAGGKVCLVGMG  295 (372)
Q Consensus       269 ~~g~~~~~~-----~~~~~l~~~G~~v~~g~~  295 (372)
                      +........     ..+..|+++..++.++..
T Consensus       262 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG  293 (386)
T PLN03139        262 NTPLTEKTRGMFNKERIAKMKKGVLIVNNARG  293 (386)
T ss_pred             eCCCCHHHHHHhCHHHHhhCCCCeEEEECCCC
Confidence            766433222     366778887777766543

>PRK09291 short chain dehydrogenase; Provisional

Probab=95.11  E-value=0.18  Score=44.61  Aligned_cols=75  Identities=19%  Similarity=0.225  Sum_probs=46.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCC-eEEecCCCcccHHHHHHHHHHHcCCcc
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      +.++||+|+ |.+|..+++.+...|+ .|+++.+++++.+.+..    .+.. .++..|-.  +. +.+.+..   ..++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~-~~~~~~~---~~~i   74 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLT--DA-IDRAQAA---EWDV   74 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCC--CH-HHHHHHh---cCCC
Confidence            458999998 9999999999999998 46777676665443322    2322 12222221  11 2233322   3589


Q ss_pred             eEEEeCCC
Q 017426          264 DVSFDCAG  271 (372)
Q Consensus       264 d~vid~~g  271 (372)
                      |++|.+.|
T Consensus        75 d~vi~~ag   82 (257)
T PRK09291         75 DVLLNNAG   82 (257)
T ss_pred             CEEEECCC
Confidence            99999877

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=95.09  E-value=0.24  Score=44.09  Aligned_cols=82  Identities=24%  Similarity=0.277  Sum_probs=47.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEec-ChhHHH-HH---HHhCCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLS-VA---KEIGADN-IVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~-~~~~~~-~~---~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||.|+ |.+|..+++.+...|+. ++.+.+ +++..+ ..   +..+... .+..+-.+ .+..+.+..+.+ ..
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~-vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~-~~   83 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAK-VVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVK-EF   83 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH-Hc
Confidence            4679999987 99999999999999985 444444 333322 22   2233221 22222222 223333333332 23


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|+++.+.|.
T Consensus        84 g~id~lv~~ag~   95 (261)
T PRK08936         84 GTLDVMINNAGI   95 (261)
T ss_pred             CCCCEEEECCCC
Confidence            579999998774

>PRK12367 short chain dehydrogenase; Provisional

Probab=95.07  E-value=0.17  Score=44.81  Aligned_cols=74  Identities=22%  Similarity=0.258  Sum_probs=45.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh-hHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD-YRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      +.++||+|+ |++|.++++.+...|+ .|+++++++ ++.+... .+....+..|-.+.   +.+.+.    -+.+|++|
T Consensus        14 ~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~~---~~~~~~----~~~iDilV   84 (245)
T PRK12367         14 GKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWECGKE---ESLDKQ----LASLDVLI   84 (245)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeCCCH---HHHHHh----cCCCCEEE
Confidence            678999998 9999999999999998 566666655 2222211 11112222222211   122222    25799999


Q ss_pred             eCCCc
Q 017426          268 DCAGL  272 (372)
Q Consensus       268 d~~g~  272 (372)
                      ++.|.
T Consensus        85 nnAG~   89 (245)
T PRK12367         85 LNHGI   89 (245)
T ss_pred             ECCcc
Confidence            98874

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.06  E-value=0.21  Score=43.77  Aligned_cols=81  Identities=20%  Similarity=0.198  Sum_probs=47.7

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH----HhCCC-eEEecCCC-cccHHHHHHHHHHHcCCc
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~----~lg~~-~v~~~~~~-~~~~~~~~~~~~~~~~~~  262 (372)
                      ..++||+|+ |.+|..+++.+...|.++++.+.++++..+.+.    ..+.. ..+..+-. ..++.+.+.+..+ ..++
T Consensus         6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~~~~   84 (249)
T PRK12825          6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVE-RFGR   84 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHH-HcCC
Confidence            468999998 999999999999999964444555544433322    22221 12222222 2233333333322 1357


Q ss_pred             ceEEEeCCC
Q 017426          263 IDVSFDCAG  271 (372)
Q Consensus       263 ~d~vid~~g  271 (372)
                      +|.+|.+.|
T Consensus        85 id~vi~~ag   93 (249)
T PRK12825         85 IDILVNNAG   93 (249)
T ss_pred             CCEEEECCc
Confidence            999999876

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=95.06  E-value=0.24  Score=43.35  Aligned_cols=82  Identities=22%  Similarity=0.276  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCC-eEEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      ++.++||.|+ |.+|..+++.+...|+ .|+...++.++.+.+ ..++.. .++..+-.+ +++.+.+.++.+ ..+++|
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id   82 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEA-DLEGVD   82 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH-HcCCCC
Confidence            3678999997 9999999999888998 566666666555433 344422 222222222 223333333322 235799


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|.+.|.
T Consensus        83 ~vi~~ag~   90 (245)
T PRK12936         83 ILVNNAGI   90 (245)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=95.06  E-value=0.24  Score=43.52  Aligned_cols=81  Identities=16%  Similarity=0.178  Sum_probs=47.8

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHH---HhCCC-eEEecCCCc-ccHHHHHHHHHHHcCCcc
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAK---EIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~---~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~~~  263 (372)
                      .++||+|+ |.+|..+++.+...|+++++...+++++.+ ...   ..+.. ..+..+-.+ .+..+.+.++.+ ..+++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~-~~~~i   80 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQ-HDEPL   80 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHH-hCCCC
Confidence            37899998 999999999988899964343455554433 222   22321 222223222 233334444432 24689


Q ss_pred             eEEEeCCCc
Q 017426          264 DVSFDCAGL  272 (372)
Q Consensus       264 d~vid~~g~  272 (372)
                      |++|.+.|.
T Consensus        81 d~vi~~ag~   89 (247)
T PRK09730         81 AALVNNAGI   89 (247)
T ss_pred             CEEEECCCC
Confidence            999998874

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.06  E-value=0.5  Score=40.42  Aligned_cols=34  Identities=26%  Similarity=0.483  Sum_probs=30.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      ..+|+|.|+|++|..+++.+.+.|...++.++.+
T Consensus        21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4689999999999999999999999778888776

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.05  E-value=0.74  Score=39.37  Aligned_cols=80  Identities=19%  Similarity=0.240  Sum_probs=52.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-HhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      .|.+++|.|.|.+|..+++.+...|+ .|++.+.++++.+.+. .+++..+ +  .  +       ++.   ...+|+++
T Consensus        27 ~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~~v-~--~--~-------~l~---~~~~Dv~v   90 (200)
T cd01075          27 EGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGATVV-A--P--E-------EIY---SVDADVFA   90 (200)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCEEE-c--c--h-------hhc---cccCCEEE
Confidence            57899999999999999999999999 5778888887766554 4464322 1  1  1       111   23688888


Q ss_pred             eCCCcHHHHHHHHHHhc
Q 017426          268 DCAGLNKTMSTALGATC  284 (372)
Q Consensus       268 d~~g~~~~~~~~~~~l~  284 (372)
                      -|......-...++.|+
T Consensus        91 p~A~~~~I~~~~~~~l~  107 (200)
T cd01075          91 PCALGGVINDDTIPQLK  107 (200)
T ss_pred             ecccccccCHHHHHHcC
Confidence            55433223334445554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=95.02  E-value=0.29  Score=43.17  Aligned_cols=79  Identities=25%  Similarity=0.305  Sum_probs=49.9

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-HhCCCe-EEecCCC-cccHHHHHHHHHHHcCCcceEEE
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~lg~~~-v~~~~~~-~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      +++|.|+ |.+|.+++..+...|+ .|+++++++++.+.+. .++... .+..+-. .+++.+.+.++.+ ..+++|+++
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~-~~~~id~vi   79 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPA-EWRNIDVLV   79 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHH-HcCCCCEEE
Confidence            6899987 9999999999999999 5777878877665443 344321 1222221 2233333333332 135799999


Q ss_pred             eCCCc
Q 017426          268 DCAGL  272 (372)
Q Consensus       268 d~~g~  272 (372)
                      .+.|.
T Consensus        80 ~~ag~   84 (248)
T PRK10538         80 NNAGL   84 (248)
T ss_pred             ECCCc
Confidence            88764

>PRK05884 short chain dehydrogenase; Provisional

Probab=95.02  E-value=0.24  Score=43.10  Aligned_cols=74  Identities=20%  Similarity=0.285  Sum_probs=47.0

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCeEEecCCCcc-cHHHHHHHHHHHcCCcceEEEe
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQ-DIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      +++|.|+ +.+|.++++.+...|+ .|+.+.+++++.+.+ ++++... +..|-.++ ++.+.++++    ...+|++++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~-~~~D~~~~~~v~~~~~~~----~~~id~lv~   75 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDA-IVCDNTDPASLEEARGLF----PHHLDTIVN   75 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcE-EecCCCCHHHHHHHHHHH----hhcCcEEEE
Confidence            5899987 9999999999988998 577777777665533 4455432 22332222 233332222    236899998


Q ss_pred             CCC
Q 017426          269 CAG  271 (372)
Q Consensus       269 ~~g  271 (372)
                      +.|
T Consensus        76 ~ag   78 (223)
T PRK05884         76 VPA   78 (223)
T ss_pred             CCC
Confidence            754

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.01  E-value=0.23  Score=44.25  Aligned_cols=81  Identities=15%  Similarity=0.208  Sum_probs=47.3

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCeEEEEecCh---hHHH-HHHHhCCC--eEEecCCCc-ccHHHHHHHHHHH
Q 017426          189 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDD---YRLS-VAKEIGAD--NIVKVSTNL-QDIAEEVEKIQKA  258 (372)
Q Consensus       189 ~g~~vlI~Ga---g~~G~~ai~l~~~~g~~~vv~v~~~~---~~~~-~~~~lg~~--~v~~~~~~~-~~~~~~~~~~~~~  258 (372)
                      .|.++||+|+   +++|.++++.+...|++ |+.+.+++   ++.+ +.+++...  ..+..|-.+ ++..+.+.++.+.
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAK-LVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE   84 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCE-EEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence            4678999986   48999999998889995 66664432   2333 33334211  122223222 3333344444332


Q ss_pred             cCCcceEEEeCCC
Q 017426          259 MGTGIDVSFDCAG  271 (372)
Q Consensus       259 ~~~~~d~vid~~g  271 (372)
                       -+++|+++++.|
T Consensus        85 -~g~ld~lv~nag   96 (257)
T PRK08594         85 -VGVIHGVAHCIA   96 (257)
T ss_pred             -CCCccEEEECcc
Confidence             367999998876

>PLN03075 nicotianamine synthase; Provisional

Probab=95.01  E-value=0.26  Score=44.65  Aligned_cols=108  Identities=19%  Similarity=0.219  Sum_probs=68.2

Q ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEecChhHHHHHHHhC-----CCeEEecCCCcccHHHH
Q 017426          178 GVHACRRANIGPETNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIG-----ADNIVKVSTNLQDIAEE  251 (372)
Q Consensus       178 a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~~~~~lg-----~~~v~~~~~~~~~~~~~  251 (372)
                      -+..+......++++|+-.|+|+.+..++.+++.. ....++.++.+++..+.+++.-     ...-+.+..  .|..+ 
T Consensus       112 E~~~L~~~~~~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~--~Da~~-  188 (296)
T PLN03075        112 EFDLLSQHVNGVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT--ADVMD-  188 (296)
T ss_pred             HHHHHHHhhcCCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE--Cchhh-
Confidence            33444332223778999999998898888888654 3337899999999888777643     112111111  12211 


Q ss_pred             HHHHHHHcCCcceEEEeCC-------CcHHHHHHHHHHhccCCEEEEE
Q 017426          252 VEKIQKAMGTGIDVSFDCA-------GLNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~-------g~~~~~~~~~~~l~~~G~~v~~  292 (372)
                         ... ..++||+||-.+       .-...+....+.|+++|.++.=
T Consensus       189 ---~~~-~l~~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr  232 (296)
T PLN03075        189 ---VTE-SLKEYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLR  232 (296)
T ss_pred             ---ccc-ccCCcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEe
Confidence               110 126899998764       2234678899999999987754

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=95.00  E-value=0.9  Score=41.10  Aligned_cols=63  Identities=19%  Similarity=0.353  Sum_probs=47.9

Q ss_pred             HHHHH----HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE--ecChhHHHHHHHhCCCeEEe
Q 017426          178 GVHAC----RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKEIGADNIVK  240 (372)
Q Consensus       178 a~~~l----~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v--~~~~~~~~~~~~lg~~~v~~  240 (372)
                      |++++    +.+.++||.+|+=--+|.+|.+++.+|+.+|++.++++  .-+.+|..+++.+|+.-+..
T Consensus        46 A~~mI~~Ae~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t  114 (300)
T COG0031          46 ALYMIEDAEKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILT  114 (300)
T ss_pred             HHHHHHHHHHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEc
Confidence            55555    34679999965554459999999999999999766665  45678899999999876543

>PRK05650 short chain dehydrogenase; Provisional

Probab=95.00  E-value=0.29  Score=43.83  Aligned_cols=79  Identities=24%  Similarity=0.299  Sum_probs=47.7

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HH---HhCCCe-EEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AK---EIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~---~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      ++||+|+ |.+|..+++.+...|++ |+.+++++++.+. ..   ..+... .+..|-.+ .++.+.+..+.. ..+++|
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~-~~~~id   79 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWR-LALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEE-KWGGID   79 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH-HcCCCC
Confidence            6899988 99999999888889994 6777777665442 22   223222 22223222 223333333322 235799


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|.+.|.
T Consensus        80 ~lI~~ag~   87 (270)
T PRK05650         80 VIVNNAGV   87 (270)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.99  E-value=0.32  Score=45.57  Aligned_cols=35  Identities=31%  Similarity=0.537  Sum_probs=30.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      ..+|||.|+|++|..+++.+...|...+..++.+.
T Consensus        28 ~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         28 DAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             CCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            46999999999999999999999999888886653

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.98  E-value=0.22  Score=43.56  Aligned_cols=81  Identities=23%  Similarity=0.363  Sum_probs=49.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHH---hCCCe-EEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKE---IGADN-IVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~---lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      +.++||.|+ |.+|..++..+...|+ .|+.+.+++++.+. .++   .+... .+..|-.+ .++.+.+++..+ ..++
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~   84 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKN-ELGS   84 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHH-HcCC
Confidence            568999987 9999999998888999 57777777665432 222   23211 22223222 233333433322 2357


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|++|.+.|.
T Consensus        85 id~vi~~ag~   94 (239)
T PRK07666         85 IDILINNAGI   94 (239)
T ss_pred             ccEEEEcCcc
Confidence            9999998764

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=94.96  E-value=0.11  Score=45.82  Aligned_cols=109  Identities=26%  Similarity=0.358  Sum_probs=65.0

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHH-HHHH
Q 017426          180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIA-EEVE  253 (372)
Q Consensus       180 ~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~-~~~~  253 (372)
                      ..+...+++||++||=.|.| .|.+...|++..| -..|+..+.++++.+.+++    +|....+....  .|.. +.+.
T Consensus        31 ~I~~~l~i~pG~~VlEaGtG-SG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~--~Dv~~~g~~  107 (247)
T PF08704_consen   31 YILMRLDIRPGSRVLEAGTG-SGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHH--RDVCEEGFD  107 (247)
T ss_dssp             HHHHHTT--TT-EEEEE--T-TSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEE--S-GGCG--S
T ss_pred             HHHHHcCCCCCCEEEEecCC-cHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEe--cceeccccc
Confidence            34567889999999998753 2666667777654 2278999999998876644    56543222111  1211 1110


Q ss_pred             HHHHHcCCcceEEEeCCCc-HHHHHHHHHHh-ccCCEEEEEcC
Q 017426          254 KIQKAMGTGIDVSFDCAGL-NKTMSTALGAT-CAGGKVCLVGM  294 (372)
Q Consensus       254 ~~~~~~~~~~d~vid~~g~-~~~~~~~~~~l-~~~G~~v~~g~  294 (372)
                      +   .....+|.||=-... ...+..+.+.| +++|+++.+..
T Consensus       108 ~---~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP  147 (247)
T PF08704_consen  108 E---ELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSP  147 (247)
T ss_dssp             T---T-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEES
T ss_pred             c---cccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC
Confidence            0   013579999744443 35788999999 89999999853

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=94.95  E-value=0.39  Score=42.54  Aligned_cols=33  Identities=27%  Similarity=0.443  Sum_probs=29.1

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEec
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV  222 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~  222 (372)
                      ..+|+|.|+|++|..++..+.+.|...+..++.
T Consensus        32 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~   64 (245)
T PRK05690         32 AARVLVVGLGGLGCAASQYLAAAGVGTLTLVDF   64 (245)
T ss_pred             CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            479999999999999999999999988887744

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=94.95  E-value=1.1  Score=34.13  Aligned_cols=92  Identities=17%  Similarity=0.161  Sum_probs=60.0

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCc
Q 017426          193 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGL  272 (372)
Q Consensus       193 vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  272 (372)
                      |+|.|.|.+|..+++.++..+. .+++++.++++.+.+++.|.. ++.-+..+   .+.+++.   +-..++.++-+.+.
T Consensus         1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~~~---~~~l~~a---~i~~a~~vv~~~~~   72 (116)
T PF02254_consen    1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDATD---PEVLERA---GIEKADAVVILTDD   72 (116)
T ss_dssp             EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-TTS---HHHHHHT---TGGCESEEEEESSS
T ss_pred             eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccchh---hhHHhhc---CccccCEEEEccCC
Confidence            5788999999999999999665 689999999999999988854 33323222   2223332   23578888888776


Q ss_pred             HHHH---HHHHHHhccCCEEEEE
Q 017426          273 NKTM---STALGATCAGGKVCLV  292 (372)
Q Consensus       273 ~~~~---~~~~~~l~~~G~~v~~  292 (372)
                      ...-   ....+.+.+..+++..
T Consensus        73 d~~n~~~~~~~r~~~~~~~ii~~   95 (116)
T PF02254_consen   73 DEENLLIALLARELNPDIRIIAR   95 (116)
T ss_dssp             HHHHHHHHHHHHHHTTTSEEEEE
T ss_pred             HHHHHHHHHHHHHHCCCCeEEEE
Confidence            4321   1233444556666654

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.94  E-value=0.27  Score=43.88  Aligned_cols=82  Identities=21%  Similarity=0.278  Sum_probs=48.3

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCeEEEEecC---hhHHH-HHHHhCCCeEEecCCC-cccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVD---DYRLS-VAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga---g~~G~~ai~l~~~~g~~~vv~v~~~---~~~~~-~~~~lg~~~v~~~~~~-~~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+   +++|.++++.+...|++ |+.+.+.   +++.+ +.++++....+..|-. .++..+.+....+. .
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~   82 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAE-LAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQH-W   82 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCe-EEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHH-h
Confidence            4678999984   58999999888889995 5555332   23332 2334453322333322 23344444444332 3


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|+++++.|.
T Consensus        83 g~iD~lvnnAG~   94 (260)
T PRK06997         83 DGLDGLVHSIGF   94 (260)
T ss_pred             CCCcEEEEcccc
Confidence            689999998763

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=94.94  E-value=0.36  Score=43.42  Aligned_cols=119  Identities=16%  Similarity=0.151  Sum_probs=68.9

Q ss_pred             HHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCCCe-EEecCCCcccHHHHHHHHH
Q 017426          180 HACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       180 ~~l~~-~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-v~~~~~~~~~~~~~~~~~~  256 (372)
                      .+++. .....+.+++|.|+|++|.+++..+...|. .+.++++++++.+ +++.+.... ....     ++.+    . 
T Consensus       106 ~~l~~~~~~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~-----~~~~----~-  174 (270)
T TIGR00507       106 SDLERLIPLRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAF-----SMDE----L-  174 (270)
T ss_pred             HHHHhcCCCccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEe-----chhh----h-
Confidence            34443 233457889999999999999988888897 6778888877654 444443211 1111     1111    1 


Q ss_pred             HHcCCcceEEEeCCCcHH--HH---HHHHHHhccCCEEEEEcCCCCCccccchhhhccCcE
Q 017426          257 KAMGTGIDVSFDCAGLNK--TM---STALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD  312 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~~~--~~---~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  312 (372)
                        ....+|+||+|++..-  ..   ......++++..++.+...+..+ ..+...-.++..
T Consensus       175 --~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T-~ll~~A~~~G~~  232 (270)
T TIGR00507       175 --PLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGET-PFLAEAKSLGTK  232 (270)
T ss_pred             --cccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCC-HHHHHHHHCCCe
Confidence              1246999999987530  11   11234567777777776554433 333444444443

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=94.90  E-value=0.43  Score=41.27  Aligned_cols=105  Identities=17%  Similarity=0.200  Sum_probs=60.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCeEEe-------cCCCccc-HHHHHHHHHH
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVK-------VSTNLQD-IAEEVEKIQK  257 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~v~~-------~~~~~~~-~~~~~~~~~~  257 (372)
                      ..++.+||+.|+|. |.-++-||. .|. .|++++.++...+.+ ++.+......       +....-+ ....+-++..
T Consensus        32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  108 (213)
T TIGR03840        32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA  108 (213)
T ss_pred             CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence            35778999999864 777777764 698 599999999988764 3333211000       0000000 0000000000


Q ss_pred             HcCCcceEEEeCCCc--------HHHHHHHHHHhccCCEEEEEcC
Q 017426          258 AMGTGIDVSFDCAGL--------NKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       258 ~~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      .....+|.|+|+..-        ...+..+.+.|+|+|++...+.
T Consensus       109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~  153 (213)
T TIGR03840       109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL  153 (213)
T ss_pred             ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence            012468999996421        2356788999999998776654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK08328 hypothetical protein; Provisional

Probab=94.90  E-value=0.36  Score=42.34  Aligned_cols=33  Identities=27%  Similarity=0.470  Sum_probs=29.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEec
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV  222 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~  222 (372)
                      +.+|+|.|+|++|..++..+.+.|...+..++.
T Consensus        27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~   59 (231)
T PRK08328         27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDE   59 (231)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            468999999999999999999999988888863

>PRK08303 short chain dehydrogenase; Provisional

Probab=94.88  E-value=0.35  Score=44.37  Aligned_cols=81  Identities=19%  Similarity=0.257  Sum_probs=48.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh----------hHHH----HHHHhCCC-eEEecCCCc-ccHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD----------YRLS----VAKEIGAD-NIVKVSTNL-QDIAEE  251 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~----------~~~~----~~~~lg~~-~v~~~~~~~-~~~~~~  251 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+.+.++.          ++.+    .++..+.. ..+..|-.+ .+..+.
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   85 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL   85 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            4678999987 9999999999999999 466666652          2222    22333422 122223222 233333


Q ss_pred             HHHHHHHcCCcceEEEeCC-C
Q 017426          252 VEKIQKAMGTGIDVSFDCA-G  271 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~-g  271 (372)
                      +.+..+. -+.+|++|++. |
T Consensus        86 ~~~~~~~-~g~iDilVnnA~g  105 (305)
T PRK08303         86 VERIDRE-QGRLDILVNDIWG  105 (305)
T ss_pred             HHHHHHH-cCCccEEEECCcc
Confidence            4443332 35799999887 5

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=94.88  E-value=0.28  Score=43.18  Aligned_cols=80  Identities=25%  Similarity=0.216  Sum_probs=46.5

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH----HHHhCCCe-EEecCCC-cccHHHHHHHHHHHcCCcc
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV----AKEIGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~----~~~lg~~~-v~~~~~~-~~~~~~~~~~~~~~~~~~~  263 (372)
                      .++||.|+ |.+|..+++.+...|++.++...+++++.+.    ++..+... .+..+-. ..+..+.+.++.+. .+++
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~i   81 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSA-FGRL   81 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHh-cCCC
Confidence            47899988 9999999999988998644444455444332    22223221 2222222 22333344443322 3579


Q ss_pred             eEEEeCCC
Q 017426          264 DVSFDCAG  271 (372)
Q Consensus       264 d~vid~~g  271 (372)
                      |++|.+.|
T Consensus        82 d~li~~ag   89 (248)
T PRK06947         82 DALVNNAG   89 (248)
T ss_pred             CEEEECCc
Confidence            99998876

>PRK09135 pteridine reductase; Provisional

Probab=94.86  E-value=0.33  Score=42.56  Aligned_cols=81  Identities=16%  Similarity=0.091  Sum_probs=47.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecC-hhHHHHH-HH---hCC--CeEEecCCCc-ccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD-DYRLSVA-KE---IGA--DNIVKVSTNL-QDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~-~~~~~~~-~~---lg~--~~v~~~~~~~-~~~~~~~~~~~~~~  259 (372)
                      .+.++||+|+ |.+|..+++.+...|++ |+++.++ +++.+.+ +.   ...  ...+..|-.+ +++...+.++.+ .
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~   82 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYR-VAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVA-A   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHH-H
Confidence            4578999998 99999999998889994 6666554 3333322 22   211  1122222222 223333333322 2


Q ss_pred             CCcceEEEeCCC
Q 017426          260 GTGIDVSFDCAG  271 (372)
Q Consensus       260 ~~~~d~vid~~g  271 (372)
                      .+++|++|.+.|
T Consensus        83 ~~~~d~vi~~ag   94 (249)
T PRK09135         83 FGRLDALVNNAS   94 (249)
T ss_pred             cCCCCEEEECCC
Confidence            357999999887

>KOG3201 consensus Uncharacterized conserved protein [Function unknown]

Probab=94.86  E-value=0.11  Score=41.98  Aligned_cols=158  Identities=15%  Similarity=0.140  Sum_probs=88.7

Q ss_pred             hHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCe-EEecCCC-cccHHHHH
Q 017426          175 LSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN-IVKVSTN-LQDIAEEV  252 (372)
Q Consensus       175 ~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~-v~~~~~~-~~~~~~~~  252 (372)
                      =+.||..++.-+.-.|.+||-.|+|.+|++-+.+|...--..|..++.+++..+-+++.--.. ..-++.- --.|...-
T Consensus        15 eala~~~l~~~n~~rg~~ilelgggft~laglmia~~a~~~~v~ltdgne~svrnv~ki~~~n~~s~~tsc~vlrw~~~~   94 (201)
T KOG3201|consen   15 EALAWTILRDPNKIRGRRILELGGGFTGLAGLMIACKAPDSSVWLTDGNEESVRNVEKIRNSNMASSLTSCCVLRWLIWG   94 (201)
T ss_pred             HHHHHHHHhchhHHhHHHHHHhcCchhhhhhhheeeecCCceEEEecCCHHHHHHHHHHHhcccccccceehhhHHHHhh
Confidence            346777786644445788888999999999999998877668999999998887776532111 0000000 00111100


Q ss_pred             HHHHHHcCCcceEEE--eCCCcH----HHHHHHHHHhccCCEEEEEcCCCCC-ccccchhhhccCcEEEeeccC-CCcHH
Q 017426          253 EKIQKAMGTGIDVSF--DCAGLN----KTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-KNTWP  324 (372)
Q Consensus       253 ~~~~~~~~~~~d~vi--d~~g~~----~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~  324 (372)
                      .+.. ..+..||+|+  ||+--.    +........|+|.|+...++...+. ...+........+++.-...+ ...++
T Consensus        95 aqsq-~eq~tFDiIlaADClFfdE~h~sLvdtIk~lL~p~g~Al~fsPRRg~sL~kF~de~~~~gf~v~l~enyde~iwq  173 (201)
T KOG3201|consen   95 AQSQ-QEQHTFDIILAADCLFFDEHHESLVDTIKSLLRPSGRALLFSPRRGQSLQKFLDEVGTVGFTVCLEENYDEAIWQ  173 (201)
T ss_pred             hHHH-HhhCcccEEEeccchhHHHHHHHHHHHHHHHhCcccceeEecCcccchHHHHHHHHHhceeEEEecccHhHHHHH
Confidence            1111 1145899998  555443    2444566789999997777543332 233333333444444443333 22344


Q ss_pred             HHHHHHHcC
Q 017426          325 LCLELLRSG  333 (372)
Q Consensus       325 ~~~~ll~~g  333 (372)
                      ...++...+
T Consensus       174 rh~~Lkk~~  182 (201)
T KOG3201|consen  174 RHGRLKKGD  182 (201)
T ss_pred             HHHHHhcCC
Confidence            444444433

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=94.84  E-value=0.33  Score=43.35  Aligned_cols=82  Identities=24%  Similarity=0.265  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HH---hCCCe-EEecCCCcc-cHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGADN-IVKVSTNLQ-DIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-v~~~~~~~~-~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ +.+|..++..+...|++ ++.+.+++++.+.+ ..   .+... .+..|-.+. +..+.+.+..+ .-+
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~   86 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGAT-IVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEK-EVG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-hCC
Confidence            4678999987 99999999888889995 66667776654322 22   24322 223332222 22333333322 235


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|.+.|.
T Consensus        87 ~id~li~~ag~   97 (265)
T PRK07097         87 VIDILVNNAGI   97 (265)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=94.84  E-value=0.25  Score=44.45  Aligned_cols=83  Identities=23%  Similarity=0.274  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HH---hCCC----eEEecCCCccc-HHHHHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD----NIVKVSTNLQD-IAEEVEKIQKA  258 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~---lg~~----~v~~~~~~~~~-~~~~~~~~~~~  258 (372)
                      .|..+||+|+ .++|.+++..+...|+ +|+.+.+++++.+.. ++   .+..    ..+..|-.+++ ..+.+....+.
T Consensus         7 ~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~   85 (270)
T KOG0725|consen    7 AGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK   85 (270)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence            5678899987 9999999999999999 577777777765433 22   2221    12222322222 33333322222


Q ss_pred             cCCcceEEEeCCCc
Q 017426          259 MGTGIDVSFDCAGL  272 (372)
Q Consensus       259 ~~~~~d~vid~~g~  272 (372)
                      ..+++|+.++..|.
T Consensus        86 ~~GkidiLvnnag~   99 (270)
T KOG0725|consen   86 FFGKIDILVNNAGA   99 (270)
T ss_pred             hCCCCCEEEEcCCc
Confidence            25789999997765

>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating)

Probab=94.82  E-value=0.37  Score=43.51  Aligned_cols=88  Identities=23%  Similarity=0.323  Sum_probs=57.0

Q ss_pred             EEEEECCCHHHHHH-HHHHHHcCCCeEEEEecChhH--HHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          192 NVLIMGAGPIGLVT-MLAARAFGAPRIVIVDVDDYR--LSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       192 ~vlI~Gag~~G~~a-i~l~~~~g~~~vv~v~~~~~~--~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      ++.|.|+|.+|... ..+.+..+++.+.+++.++++  .+.++++|.....      .++.    .+..  ...+|+||+
T Consensus         3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~------~~~e----~ll~--~~dIDaV~i   70 (285)
T TIGR03215         3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSA------EGVD----GLLA--NPDIDIVFD   70 (285)
T ss_pred             EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEE------CCHH----HHhc--CCCCCEEEE
Confidence            68899999999855 566665677655566666654  4567788865432      1222    2221  247999999


Q ss_pred             CCCcHHHHHHHHHHhccCCEEEEE
Q 017426          269 CAGLNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~G~~v~~  292 (372)
                      +++...+.+.+...+.. |+.+..
T Consensus        71 aTp~~~H~e~a~~al~a-Gk~VId   93 (285)
T TIGR03215        71 ATSAKAHARHARLLAEL-GKIVID   93 (285)
T ss_pred             CCCcHHHHHHHHHHHHc-CCEEEE
Confidence            99987666666666664 554543

Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.

>PRK04266 fibrillarin; Provisional

Probab=94.80  E-value=1  Score=39.37  Aligned_cols=104  Identities=16%  Similarity=0.196  Sum_probs=59.9

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh-C-CCeEEecCCCcccHHHHHHHHHHHcC
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-G-ADNIVKVSTNLQDIAEEVEKIQKAMG  260 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l-g-~~~v~~~~~~~~~~~~~~~~~~~~~~  260 (372)
                      +...+++|++||=.|+|. |.....+++..+...|++++.+++..+.+.+. . ...+........+. .....+    .
T Consensus        66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~-~~~~~l----~  139 (226)
T PRK04266         66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKP-ERYAHV----V  139 (226)
T ss_pred             hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCc-chhhhc----c
Confidence            457889999988888643 44555666665433699999999766643222 1 11111111111110 001111    2


Q ss_pred             CcceEEEeCCCcHH----HHHHHHHHhccCCEEEEE
Q 017426          261 TGIDVSFDCAGLNK----TMSTALGATCAGGKVCLV  292 (372)
Q Consensus       261 ~~~d~vid~~g~~~----~~~~~~~~l~~~G~~v~~  292 (372)
                      ..+|+++-....+.    .++.+.+.|+|+|+++..
T Consensus       140 ~~~D~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI~  175 (226)
T PRK04266        140 EKVDVIYQDVAQPNQAEIAIDNAEFFLKDGGYLLLA  175 (226)
T ss_pred             ccCCEEEECCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence            45999995444321    356788899999999873

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=94.76  E-value=0.34  Score=42.57  Aligned_cols=83  Identities=19%  Similarity=0.229  Sum_probs=47.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHH---hCCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKE---IGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~---lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||.|+ |.+|..++..+...|+++++...+++++.+ ..+.   .+.. ..+..|-.+ ..+.+.+.+..+ ..+
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   83 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVN-HFG   83 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-HcC
Confidence            3678999987 999999999888899854333334444332 2222   2322 122333222 233333433332 135


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      .+|++|.+.|.
T Consensus        84 ~id~vi~~ag~   94 (247)
T PRK12935         84 KVDILVNNAGI   94 (247)
T ss_pred             CCCEEEECCCC
Confidence            79999998775

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=94.75  E-value=0.77  Score=41.06  Aligned_cols=106  Identities=18%  Similarity=0.193  Sum_probs=66.2

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHHHh-C------CCeEEecCCCcccHHHHHHH
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEI-G------ADNIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~~l-g------~~~v~~~~~~~~~~~~~~~~  254 (372)
                      +...++++++||-.|+|. |..+..+++..+. ..|++++.+++-.+.+++. .      ...+.......++       
T Consensus        67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~-------  138 (261)
T PLN02233         67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATD-------  138 (261)
T ss_pred             HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccccc-------
Confidence            345678899999998753 5566777777653 2799999999988776532 1      1111111111011       


Q ss_pred             HHHHcCCcceEEEeCCC------cHHHHHHHHHHhccCCEEEEEcCCCC
Q 017426          255 IQKAMGTGIDVSFDCAG------LNKTMSTALGATCAGGKVCLVGMGHH  297 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g~~~~  297 (372)
                      +. ...+.+|.|+-..+      -...+..+.+.|+|+|+++.+.....
T Consensus       139 lp-~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~~~  186 (261)
T PLN02233        139 LP-FDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFNKS  186 (261)
T ss_pred             CC-CCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECCCC
Confidence            10 01356999975322      12467789999999999988865543

>PRK12744 short chain dehydrogenase; Provisional

Probab=94.73  E-value=0.3  Score=43.35  Aligned_cols=83  Identities=16%  Similarity=0.139  Sum_probs=46.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh---hH-HHHHH---HhCCCe-EEecCCCc-ccHHHHHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD---YR-LSVAK---EIGADN-IVKVSTNL-QDIAEEVEKIQKA  258 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~---~~-~~~~~---~lg~~~-v~~~~~~~-~~~~~~~~~~~~~  258 (372)
                      .+.++||.|+ |.+|.++++.+...|+++++...+.+   +. .+..+   ..+... .+..|-.+ .+..+.+.+..+ 
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-   85 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA-   85 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH-
Confidence            3578999987 99999999999889996444432221   22 22222   234321 22223222 222233333322 


Q ss_pred             cCCcceEEEeCCCc
Q 017426          259 MGTGIDVSFDCAGL  272 (372)
Q Consensus       259 ~~~~~d~vid~~g~  272 (372)
                      ..+++|++|.+.|.
T Consensus        86 ~~~~id~li~~ag~   99 (257)
T PRK12744         86 AFGRPDIAINTVGK   99 (257)
T ss_pred             hhCCCCEEEECCcc
Confidence            23579999998874

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=94.72  E-value=0.44  Score=37.81  Aligned_cols=95  Identities=22%  Similarity=0.290  Sum_probs=56.8

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh-------------------hHHH----HHHHhCC-CeEEecCCCc
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD-------------------YRLS----VAKEIGA-DNIVKVSTNL  245 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~-------------------~~~~----~~~~lg~-~~v~~~~~~~  245 (372)
                      ..+|+|.|+|++|..++..+-+.|...+..++.+.                   .|.+    .++++.+ ..+..+.   
T Consensus         2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~---   78 (135)
T PF00899_consen    2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIP---   78 (135)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEE---
T ss_pred             CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeee---
Confidence            46899999999999999999999998888874321                   1222    2333432 2222221   


Q ss_pred             ccH-HHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEE
Q 017426          246 QDI-AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCL  291 (372)
Q Consensus       246 ~~~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~  291 (372)
                      .++ .+...++.    .++|+||+|.........+.+.+...+.-..
T Consensus        79 ~~~~~~~~~~~~----~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i  121 (135)
T PF00899_consen   79 EKIDEENIEELL----KDYDIVIDCVDSLAARLLLNEICREYGIPFI  121 (135)
T ss_dssp             SHCSHHHHHHHH----HTSSEEEEESSSHHHHHHHHHHHHHTT-EEE
T ss_pred             cccccccccccc----cCCCEEEEecCCHHHHHHHHHHHHHcCCCEE
Confidence            122 22233332    4789999999986554455556665655443

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=94.72  E-value=0.39  Score=42.01  Aligned_cols=82  Identities=20%  Similarity=0.262  Sum_probs=46.4

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHH---hCCCe-EEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKE---IGADN-IVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~---lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      +.++||+|+ |.+|..++..+...|+++++...+.+++.+ ....   .+... .+..+-.+ .++.+.+.++.+ ...+
T Consensus         5 ~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~~   83 (248)
T PRK05557          5 GKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKA-EFGG   83 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-HcCC
Confidence            468999998 999999999999999964344433332222 2222   23221 22222222 223333333332 1357


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|.+|.+.|.
T Consensus        84 id~vi~~ag~   93 (248)
T PRK05557         84 VDILVNNAGI   93 (248)
T ss_pred             CCEEEECCCc
Confidence            8999998764

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=94.67  E-value=0.78  Score=33.75  Aligned_cols=86  Identities=21%  Similarity=0.227  Sum_probs=53.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcC---CCeEEEEecChhHHHHH-HHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          192 NVLIMGAGPIGLVTMLAARAFG---APRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g---~~~vv~v~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      +|.|+|+|.+|.++++-+...|   .+..++.++++++.+.+ ++++.....      .+..+.+        ...|+||
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~--------~~advvi   66 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA------DDNEEAA--------QEADVVI   66 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES------EEHHHHH--------HHTSEEE
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc------CChHHhh--------ccCCEEE
Confidence            5778899999999999998888   64333558888887765 556643221      1222222        2579999


Q ss_pred             eCCCcHHHHHHHHH---HhccCCEEEEE
Q 017426          268 DCAGLNKTMSTALG---ATCAGGKVCLV  292 (372)
Q Consensus       268 d~~g~~~~~~~~~~---~l~~~G~~v~~  292 (372)
                      -|+... .+...+.   .+.++..++.+
T Consensus        67 lav~p~-~~~~v~~~i~~~~~~~~vis~   93 (96)
T PF03807_consen   67 LAVKPQ-QLPEVLSEIPHLLKGKLVISI   93 (96)
T ss_dssp             E-S-GG-GHHHHHHHHHHHHTTSEEEEE
T ss_pred             EEECHH-HHHHHHHHHhhccCCCEEEEe
Confidence            998864 4444333   34455555554

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK06484 short chain dehydrogenase; Validated

Probab=94.67  E-value=0.25  Score=48.92  Aligned_cols=82  Identities=27%  Similarity=0.368  Sum_probs=53.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCCCe-EEecCCC-cccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-v~~~~~~-~~~~~~~~~~~~~~~~~~~d  264 (372)
                      .+.++||+|+ +++|.++++.+...|+ .|+.+.++.++.+ ..++++... .+..|-. .++..+.+.++.+ ..+++|
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~g~iD   81 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHR-EFGRID   81 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHH-HhCCCC
Confidence            5678999987 9999999999999999 5777777777654 445565322 1222222 2333344444333 235799


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|++.|.
T Consensus        82 ~li~nag~   89 (520)
T PRK06484         82 VLVNNAGV   89 (520)
T ss_pred             EEEECCCc
Confidence            99998764

>PRK07574 formate dehydrogenase; Provisional

Probab=94.64  E-value=0.29  Score=46.26  Aligned_cols=90  Identities=20%  Similarity=0.233  Sum_probs=57.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .|.+|.|+|.|.+|+.+++.++.+|. .|++.++.....+..+.++....       .+    +.++.    ...|+|+-
T Consensus       191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~~-------~~----l~ell----~~aDvV~l  254 (385)
T PRK07574        191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTYH-------VS----FDSLV----SVCDVVTI  254 (385)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCceec-------CC----HHHHh----hcCCEEEE
Confidence            56789999999999999999999999 57888776544444444553211       11    22222    35788877


Q ss_pred             CCCcHHHHH-----HHHHHhccCCEEEEEcC
Q 017426          269 CAGLNKTMS-----TALGATCAGGKVCLVGM  294 (372)
Q Consensus       269 ~~g~~~~~~-----~~~~~l~~~G~~v~~g~  294 (372)
                      +.......+     ..+..|+++..++.++.
T Consensus       255 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aR  285 (385)
T PRK07574        255 HCPLHPETEHLFDADVLSRMKRGSYLVNTAR  285 (385)
T ss_pred             cCCCCHHHHHHhCHHHHhcCCCCcEEEECCC
Confidence            665433222     35566777766666543

>PLN02244 tocopherol O-methyltransferase

Probab=94.64  E-value=0.68  Score=43.17  Aligned_cols=95  Identities=16%  Similarity=0.238  Sum_probs=61.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh----CCCe---EEecCCCcccHHHHHHHHHHHcC
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GADN---IVKVSTNLQDIAEEVEKIQKAMG  260 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l----g~~~---v~~~~~~~~~~~~~~~~~~~~~~  260 (372)
                      +++++||=+|+|. |..+..+++..|+ .|++++.++...+.+++.    +...   ++..+..+.++          ..
T Consensus       117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~~~----------~~  184 (340)
T PLN02244        117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQPF----------ED  184 (340)
T ss_pred             CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccCCC----------CC
Confidence            6888998888753 6677788887787 689999999876665442    3321   11111111010          13


Q ss_pred             CcceEEEeCCCc------HHHHHHHHHHhccCCEEEEEcC
Q 017426          261 TGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       261 ~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      +.||+|+.....      ...+..+.+.|+|+|++++...
T Consensus       185 ~~FD~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~  224 (340)
T PLN02244        185 GQFDLVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVTW  224 (340)
T ss_pred             CCccEEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            579999863221      2356788999999999998754

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=94.64  E-value=0.4  Score=43.57  Aligned_cols=92  Identities=22%  Similarity=0.242  Sum_probs=56.2

Q ss_pred             CEEEEECCCHHHHH-HHHHHHHcCCCeEEEEecChh--HHHHHHHhCCCeEEecCCCcccHHHHHHHHHHH-cCCcceEE
Q 017426          191 TNVLIMGAGPIGLV-TMLAARAFGAPRIVIVDVDDY--RLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA-MGTGIDVS  266 (372)
Q Consensus       191 ~~vlI~Gag~~G~~-ai~l~~~~g~~~vv~v~~~~~--~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~d~v  266 (372)
                      -++.|+|+|.+|.. +..+.+..+.+.+.+++.+++  ...+++++|.....      .++..    +.+. ....+|+|
T Consensus         5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~------~~ie~----LL~~~~~~dIDiV   74 (302)
T PRK08300          5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA------EGIDG----LLAMPEFDDIDIV   74 (302)
T ss_pred             CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc------CCHHH----HHhCcCCCCCCEE
Confidence            47899999999987 445555556766666666664  34567778864321      12222    2210 01479999


Q ss_pred             EeCCCcHHHHHHHHHHhccCCEEEEE
Q 017426          267 FDCAGLNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       267 id~~g~~~~~~~~~~~l~~~G~~v~~  292 (372)
                      |++++...+.+.+...+..+-.++..
T Consensus        75 f~AT~a~~H~e~a~~a~eaGk~VID~  100 (302)
T PRK08300         75 FDATSAGAHVRHAAKLREAGIRAIDL  100 (302)
T ss_pred             EECCCHHHHHHHHHHHHHcCCeEEEC
Confidence            99999875655555555554444443

>PRK07577 short chain dehydrogenase; Provisional

Probab=94.63  E-value=0.22  Score=43.36  Aligned_cols=74  Identities=18%  Similarity=0.325  Sum_probs=47.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCC-cccHHHHHHHHHHHcCCcceEEE
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      +.++||.|+ |.+|..+++.+...|. .|+++.+++++     .... .++..+-. .++..+.+.++.+  ..++|++|
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~-~~~~~D~~~~~~~~~~~~~~~~--~~~~d~vi   73 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPG-ELFACDLADIEQTAATLAQINE--IHPVDAIV   73 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCc-eEEEeeCCCHHHHHHHHHHHHH--hCCCcEEE
Confidence            568999998 9999999999999998 57777676544     1121 22222222 2333444444433  23689999


Q ss_pred             eCCCc
Q 017426          268 DCAGL  272 (372)
Q Consensus       268 d~~g~  272 (372)
                      .+.|.
T Consensus        74 ~~ag~   78 (234)
T PRK07577         74 NNVGI   78 (234)
T ss_pred             ECCCC
Confidence            98774

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=94.61  E-value=0.72  Score=39.28  Aligned_cols=99  Identities=16%  Similarity=0.223  Sum_probs=60.7

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh----CCCeEEecCCCcccHHHHHHHHHHH
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      +.....++.+||-.|+|. |..+..+++. |. .|++++.+++-.+.+++.    +...+...   ..++.    ++.  
T Consensus        24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~---~~d~~----~~~--   91 (197)
T PRK11207         24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNLHTA---VVDLN----NLT--   91 (197)
T ss_pred             HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcceEE---ecChh----hCC--
Confidence            334455678999998864 7777777765 76 699999999876665442    32221110   01111    110  


Q ss_pred             cCCcceEEEeCCC----c----HHHHHHHHHHhccCCEEEEEc
Q 017426          259 MGTGIDVSFDCAG----L----NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       259 ~~~~~d~vid~~g----~----~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ....+|+|+....    .    ...+..+.+.|+++|.++.+.
T Consensus        92 ~~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~  134 (197)
T PRK11207         92 FDGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA  134 (197)
T ss_pred             cCCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            1356999987532    1    235667888999999966543

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=94.60  E-value=0.81  Score=40.94  Aligned_cols=35  Identities=23%  Similarity=0.442  Sum_probs=30.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      .+.+|+|.|+|++|..++..+-+.|...+..++.+
T Consensus        29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            35789999999999999999999998788888654

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=94.59  E-value=0.73  Score=41.28  Aligned_cols=105  Identities=18%  Similarity=0.223  Sum_probs=66.3

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCC-eEEecCCCcccHHHHHHHHHHHc
Q 017426          181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       181 ~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      ++...+++++.+||=+|+|. |..+..+++..+. .|++++.+++..+.+++.... ..+.+..  .+..    +.. ..
T Consensus        44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~--~D~~----~~~-~~  114 (263)
T PTZ00098         44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEA--NDIL----KKD-FP  114 (263)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEE--CCcc----cCC-CC
Confidence            45667889999999898753 5556677776777 699999999887777663211 1111100  1110    000 01


Q ss_pred             CCcceEEEeC--C---C---cHHHHHHHHHHhccCCEEEEEcC
Q 017426          260 GTGIDVSFDC--A---G---LNKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       260 ~~~~d~vid~--~---g---~~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      .+.||+|+..  .   +   -...+..+.+.|+|+|.++....
T Consensus       115 ~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~  157 (263)
T PTZ00098        115 ENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY  157 (263)
T ss_pred             CCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            3579999852  1   1   12356778899999999988654

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=94.57  E-value=0.41  Score=42.06  Aligned_cols=82  Identities=18%  Similarity=0.232  Sum_probs=47.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh-hHHHHHHH---hCCCeE-EecCCC-cccHHHHHHHHHHHcCCc
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD-YRLSVAKE---IGADNI-VKVSTN-LQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~-~~~~~~~~---lg~~~v-~~~~~~-~~~~~~~~~~~~~~~~~~  262 (372)
                      +..+||+|+ |.+|..+++.+...|+++++...+++ ++.+.++.   .+.... +..|-. .++..+.+.+..+. .++
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   81 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAE-VGE   81 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-hCC
Confidence            567899987 99999999999999996444343333 23333333   343322 122221 22333333333332 358


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|++|++.|.
T Consensus        82 id~li~~ag~   91 (246)
T PRK12938         82 IDVLVNNAGI   91 (246)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=94.57  E-value=0.26  Score=43.05  Aligned_cols=80  Identities=23%  Similarity=0.231  Sum_probs=46.1

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEec-ChhHHH-HHHHh---CCC-eEEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLS-VAKEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~-~~~~~~-~~~~l---g~~-~v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      .++||+|+ |.+|..+++.+...|++ ++++.+ ++++.+ ...++   +.. ..+..+-.+ .++.+.+.++.+ ..++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYR-VAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEA-ELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHH-HcCC
Confidence            36899987 99999999999999995 555544 444332 22222   211 122222222 223333333332 2357


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|++|.+.|.
T Consensus        79 id~vi~~ag~   88 (242)
T TIGR01829        79 IDVLVNNAGI   88 (242)
T ss_pred             CcEEEECCCC
Confidence            9999998864

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=94.56  E-value=1.1  Score=34.53  Aligned_cols=87  Identities=24%  Similarity=0.260  Sum_probs=58.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHc--CCCeEEEEecChhHHHH-HHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          192 NVLIMGAGPIGLVTMLAARAF--GAPRIVIVDVDDYRLSV-AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~--g~~~vv~v~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      ++.|.|+|.+|.....-++..  +.+.+.+++.++++.+. .+++|.. .  |+    ++.    ++.+  ...+|+|+-
T Consensus         2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~--~~----~~~----~ll~--~~~~D~V~I   68 (120)
T PF01408_consen    2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-V--YT----DLE----ELLA--DEDVDAVII   68 (120)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-E--ES----SHH----HHHH--HTTESEEEE
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-c--hh----HHH----HHHH--hhcCCEEEE
Confidence            678999999998877655554  55444566777776664 5677876 2  22    222    2322  247999999


Q ss_pred             CCCcHHHHHHHHHHhccCCEEEEE
Q 017426          269 CAGLNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~G~~v~~  292 (372)
                      ++....+.+.+..++..+- .+.+
T Consensus        69 ~tp~~~h~~~~~~~l~~g~-~v~~   91 (120)
T PF01408_consen   69 ATPPSSHAEIAKKALEAGK-HVLV   91 (120)
T ss_dssp             ESSGGGHHHHHHHHHHTTS-EEEE
T ss_pred             ecCCcchHHHHHHHHHcCC-EEEE
Confidence            9998877777777887554 5555

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=94.55  E-value=1.1  Score=38.77  Aligned_cols=105  Identities=19%  Similarity=0.198  Sum_probs=67.9

Q ss_pred             CCCEEEEEC-C--CHHHHHHHHHHHHcCCCeEEEEecChh---H-HHHHHHhCCCeEEecCCCccc-HHHHHHHHHHHcC
Q 017426          189 PETNVLIMG-A--GPIGLVTMLAARAFGAPRIVIVDVDDY---R-LSVAKEIGADNIVKVSTNLQD-IAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~G-a--g~~G~~ai~l~~~~g~~~vv~v~~~~~---~-~~~~~~lg~~~v~~~~~~~~~-~~~~~~~~~~~~~  260 (372)
                      .|++.||.| +  -.++..+++.++..|++ ...+--.++   | .++++.+|.+.++..|-.+.. ......++. ...
T Consensus         5 ~GK~~lI~Gvan~rSIAwGIAk~l~~~GAe-L~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~-~~~   82 (259)
T COG0623           5 EGKRILIMGVANNRSIAWGIAKALAEQGAE-LAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIK-KKW   82 (259)
T ss_pred             CCceEEEEEecccccHHHHHHHHHHHcCCE-EEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHH-Hhh
Confidence            588999987 3  67888899999999996 444434442   2 345667787777666543333 333233332 246


Q ss_pred             CcceEEEeCCCcH-----------------------------HHHHHHHHHhccCCEEEEEcCC
Q 017426          261 TGIDVSFDCAGLN-----------------------------KTMSTALGATCAGGKVCLVGMG  295 (372)
Q Consensus       261 ~~~d~vid~~g~~-----------------------------~~~~~~~~~l~~~G~~v~~g~~  295 (372)
                      +++|.++-+++..                             +....+...|.++|.++.+...
T Consensus        83 g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYl  146 (259)
T COG0623          83 GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYL  146 (259)
T ss_pred             CcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEec
Confidence            7899998876542                             1233456678889998888643

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=94.53  E-value=0.36  Score=40.54  Aligned_cols=94  Identities=20%  Similarity=0.288  Sum_probs=57.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH----HhCCCeEEecCCCcccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d  264 (372)
                      ++++||=.|+|. |..++.+++......|++++.+++..+.++    +.+.+.+....   .+..+    +.  ....+|
T Consensus        42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~---~d~~~----~~--~~~~fD  111 (181)
T TIGR00138        42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVN---GRAED----FQ--HEEQFD  111 (181)
T ss_pred             CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEe---cchhh----cc--ccCCcc
Confidence            378888888743 555556665554346999999998665543    35554332211   12211    11  136899


Q ss_pred             EEEeCC-C-cHHHHHHHHHHhccCCEEEEE
Q 017426          265 VSFDCA-G-LNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       265 ~vid~~-g-~~~~~~~~~~~l~~~G~~v~~  292 (372)
                      +|+-.. . -+..++.+.+.|+++|.++..
T Consensus       112 ~I~s~~~~~~~~~~~~~~~~LkpgG~lvi~  141 (181)
T TIGR00138       112 VITSRALASLNVLLELTLNLLKVGGYFLAY  141 (181)
T ss_pred             EEEehhhhCHHHHHHHHHHhcCCCCEEEEE
Confidence            998542 1 134556778889999998876

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=94.50  E-value=0.21  Score=38.90  Aligned_cols=90  Identities=20%  Similarity=0.203  Sum_probs=52.7

Q ss_pred             EEEEECC-CHHHHHHHHHHHHc-CCCeEEEEecCh-hHHHHHHHhC----CCeEEecCCCcccHHHHHHHHHHHcCCcce
Q 017426          192 NVLIMGA-GPIGLVTMLAARAF-GAPRIVIVDVDD-YRLSVAKEIG----ADNIVKVSTNLQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~-g~~~vv~v~~~~-~~~~~~~~lg----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d  264 (372)
                      +|.|.|+ |.+|..+++++... .++.+.++.++. ....+...++    .... ...+  .+    ...+     ..+|
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~--~~----~~~~-----~~~D   68 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDL-SVED--AD----PEEL-----SDVD   68 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEE-BEEE--TS----GHHH-----TTES
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccce-eEee--cc----hhHh-----hcCC
Confidence            6889997 99999999998863 555555555555 2222222222    2221 1111  11    1111     5899


Q ss_pred             EEEeCCCcHHHHHHHHHHhccCCEEEEEc
Q 017426          265 VSFDCAGLNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       265 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      +||.|.+.....+..-..+..+-+++..+
T Consensus        69 vvf~a~~~~~~~~~~~~~~~~g~~ViD~s   97 (121)
T PF01118_consen   69 VVFLALPHGASKELAPKLLKAGIKVIDLS   97 (121)
T ss_dssp             EEEE-SCHHHHHHHHHHHHHTTSEEEESS
T ss_pred             EEEecCchhHHHHHHHHHhhCCcEEEeCC
Confidence            99999998655555555566666777765

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=94.49  E-value=0.32  Score=46.42  Aligned_cols=76  Identities=13%  Similarity=0.258  Sum_probs=46.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCC-CeEEecCCCcccHHHHHHHHHHHcCCcceE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~  265 (372)
                      .+.+++|.|+ |.+|.++++.+...|+ .|+++++++++.+.. ...+. ...+..|-.+   .+.+.+..    +++|+
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd---~~~v~~~l----~~IDi  248 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQ---EAALAELL----EKVDI  248 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC---HHHHHHHh----CCCCE
Confidence            4679999998 9999999998888998 567776766554322 11111 1122222211   12233322    57999


Q ss_pred             EEeCCCc
Q 017426          266 SFDCAGL  272 (372)
Q Consensus       266 vid~~g~  272 (372)
                      +|++.|.
T Consensus       249 LInnAGi  255 (406)
T PRK07424        249 LIINHGI  255 (406)
T ss_pred             EEECCCc
Confidence            9987764

>PRK05855 short chain dehydrogenase; Validated

Probab=94.47  E-value=0.36  Score=48.29  Aligned_cols=82  Identities=24%  Similarity=0.259  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-H---HhCCC-eEEecCCCcc-cHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGAD-NIVKVSTNLQ-DIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~---~lg~~-~v~~~~~~~~-~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |++|..+++.+...|++ |+.++++.++.+.+ +   ..|.. ..+..|-.+. ...+.+.++.+ ..+
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~-~~g  391 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAE-VVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRA-EHG  391 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH-hcC
Confidence            4568999988 99999999988889995 77777877665433 2   23432 1222232222 23333333322 235


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus       392 ~id~lv~~Ag~  402 (582)
T PRK05855        392 VPDIVVNNAGI  402 (582)
T ss_pred             CCcEEEECCcc
Confidence            79999998875

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=94.47  E-value=0.51  Score=42.86  Aligned_cols=138  Identities=19%  Similarity=0.339  Sum_probs=71.6

Q ss_pred             CcceeEEEecCCceEECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          144 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       144 g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      .+|.+|-.-+.+..+.+.+++.|-....-.+ .....+++.. .++|++||=.|+|. |.+++.- ..+|++.|++++.+
T Consensus       118 P~w~~~~~~~~~~~I~idPg~AFGTG~H~TT-~lcl~~l~~~-~~~g~~vLDvG~GS-GILaiaA-~klGA~~v~a~DiD  193 (295)
T PF06325_consen  118 PSWEEYPEPPDEIVIEIDPGMAFGTGHHPTT-RLCLELLEKY-VKPGKRVLDVGCGS-GILAIAA-AKLGAKKVVAIDID  193 (295)
T ss_dssp             ETT----SSTTSEEEEESTTSSS-SSHCHHH-HHHHHHHHHH-SSTTSEEEEES-TT-SHHHHHH-HHTTBSEEEEEESS
T ss_pred             CCCcccCCCCCcEEEEECCCCcccCCCCHHH-HHHHHHHHHh-ccCCCEEEEeCCcH-HHHHHHH-HHcCCCeEEEecCC
Confidence            3444442223455677766665544432211 1122333333 57888988888632 3333332 33599999999999


Q ss_pred             hhHHHHHHH---h-CCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHH---HHHHHHHHhccCCEEEEEcCCC
Q 017426          224 DYRLSVAKE---I-GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK---TMSTALGATCAGGKVCLVGMGH  296 (372)
Q Consensus       224 ~~~~~~~~~---l-g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g~~~  296 (372)
                      +...+.++.   + |...-+.... ..+.          ...+||+|+-..-..-   ......+.|+++|.++..|...
T Consensus       194 p~Av~~a~~N~~~N~~~~~~~v~~-~~~~----------~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~  262 (295)
T PF06325_consen  194 PLAVEAARENAELNGVEDRIEVSL-SEDL----------VEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGILE  262 (295)
T ss_dssp             CHHHHHHHHHHHHTT-TTCEEESC-TSCT----------CCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEEG
T ss_pred             HHHHHHHHHHHHHcCCCeeEEEEE-eccc----------ccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEccccH
Confidence            987665544   2 2222221111 1111          1368999997666432   3334566788999999877543

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=94.46  E-value=0.33  Score=42.71  Aligned_cols=84  Identities=21%  Similarity=0.333  Sum_probs=51.3

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH----HHhCCCe--EE--ecCC-CcccHHHHHHHHH
Q 017426          187 IGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN--IV--KVST-NLQDIAEEVEKIQ  256 (372)
Q Consensus       187 ~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~----~~lg~~~--v~--~~~~-~~~~~~~~~~~~~  256 (372)
                      ..++.++||.|+ |.+|..+++.+...|+ .|++++++.++.+.+    ++.+...  ++  +.+. ...++.+....+.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence            457889999987 9999999998888898 567777776554322    2233221  22  2221 1233334333333


Q ss_pred             HHcCCcceEEEeCCCc
Q 017426          257 KAMGTGIDVSFDCAGL  272 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~  272 (372)
                      + ..+++|++|.+.+.
T Consensus        88 ~-~~~~id~vi~~Ag~  102 (247)
T PRK08945         88 E-QFGRLDGVLHNAGL  102 (247)
T ss_pred             H-HhCCCCEEEECCcc
Confidence            2 23579999987753

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=94.44  E-value=0.17  Score=49.45  Aligned_cols=77  Identities=22%  Similarity=0.344  Sum_probs=52.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh---------------------hHHHHHHHhCCCeEEecCCCccc
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD---------------------YRLSVAKEIGADNIVKVSTNLQD  247 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~---------------------~~~~~~~~lg~~~v~~~~~~~~~  247 (372)
                      ++++|+|+|+|+.|+.++..++..|.+ |++.+..+                     ...+.++++|++...+..- ..+
T Consensus       140 ~~~~V~IIG~GpaGl~aA~~l~~~G~~-V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v-~~~  217 (467)
T TIGR01318       140 TGKRVAVIGAGPAGLACADILARAGVQ-VVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEV-GRD  217 (467)
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHcCCe-EEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEe-CCc
Confidence            678999999999999999999999995 66666543                     2456677888764332110 011


Q ss_pred             HHHHHHHHHHHcCCcceEEEeCCCcH
Q 017426          248 IAEEVEKIQKAMGTGIDVSFDCAGLN  273 (372)
Q Consensus       248 ~~~~~~~~~~~~~~~~d~vid~~g~~  273 (372)
                      +  .+..+.    .++|.||.++|..
T Consensus       218 ~--~~~~~~----~~~D~vilAtGa~  237 (467)
T TIGR01318       218 I--SLDDLL----EDYDAVFLGVGTY  237 (467)
T ss_pred             c--CHHHHH----hcCCEEEEEeCCC
Confidence            1  112221    3699999999875

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=94.43  E-value=0.72  Score=40.33  Aligned_cols=32  Identities=31%  Similarity=0.468  Sum_probs=28.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEe
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD  221 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~  221 (372)
                      ..+|+|.|+|++|..++..+.+.|...+..++
T Consensus        21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD   52 (228)
T cd00757          21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVD   52 (228)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEc
Confidence            46999999999999999999999998887774

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2

Probab=94.42  E-value=0.42  Score=42.35  Aligned_cols=95  Identities=18%  Similarity=0.178  Sum_probs=61.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC---------C-eEEecCCCcccHHHHHHHHHHH
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA---------D-NIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~---------~-~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      ..++|||+|+|. |..+-.+++....+.+.+++.+++-.+.++++-.         . .++.     .|-...+++    
T Consensus        76 ~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~-----~Dg~~~l~~----  145 (246)
T PF01564_consen   76 NPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII-----GDGRKFLKE----  145 (246)
T ss_dssp             ST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE-----STHHHHHHT----
T ss_pred             CcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE-----hhhHHHHHh----
Confidence            578999998644 5556677777766789999999999888887521         1 1221     232333332    


Q ss_pred             cCC-cceEEE-eCCC---------cHHHHHHHHHHhccCCEEEEEc
Q 017426          259 MGT-GIDVSF-DCAG---------LNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       259 ~~~-~~d~vi-d~~g---------~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ... .+|+|| |...         +.+-++.+.+.|+++|.++...
T Consensus       146 ~~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~Gv~v~~~  191 (246)
T PF01564_consen  146 TQEEKYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPDGVLVLQA  191 (246)
T ss_dssp             SSST-EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccCCcccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCCcEEEEEc
Confidence            344 899998 5443         2356778899999999988764

5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=94.41  E-value=0.87  Score=40.51  Aligned_cols=98  Identities=22%  Similarity=0.283  Sum_probs=66.9

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHc
Q 017426          181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       181 ~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      .+......++.+||=.|+|. |..+..+++.. +. .|++++.++.-.+.+++.+.... .     .+.    .++.  .
T Consensus        21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~-~-----~d~----~~~~--~   86 (255)
T PRK14103         21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDAR-T-----GDV----RDWK--P   86 (255)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEE-E-----cCh----hhCC--C
Confidence            34556667889999898754 67777787775 44 69999999998888877654422 1     121    1111  1


Q ss_pred             CCcceEEEeCCC-----c-HHHHHHHHHHhccCCEEEEE
Q 017426          260 GTGIDVSFDCAG-----L-NKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       260 ~~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~  292 (372)
                      ...||+|+....     . ...+..+.+.|+|+|.++..
T Consensus        87 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~  125 (255)
T PRK14103         87 KPDTDVVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ  125 (255)
T ss_pred             CCCceEEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence            357999986432     2 34567788999999998865

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.41  E-value=0.37  Score=44.18  Aligned_cols=81  Identities=23%  Similarity=0.318  Sum_probs=47.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecC-hhHH-HHHH---HhCCCe-EEecCCCcc-cHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD-DYRL-SVAK---EIGADN-IVKVSTNLQ-DIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~-~~~~-~~~~---~lg~~~-v~~~~~~~~-~~~~~~~~~~~~~~  260 (372)
                      .|.++||+|+ +.+|...++.+...|++ |++++++ +++. +..+   ..|... .+..|-.+. +..+.+.+..+  .
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~-Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~--~   87 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGAT-VVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG--L   87 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH--h
Confidence            4678999987 99999999988889995 6666543 2222 2222   334322 122222222 22222322222  3


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus        88 g~iD~li~nAG~   99 (306)
T PRK07792         88 GGLDIVVNNAGI   99 (306)
T ss_pred             CCCCEEEECCCC
Confidence            689999998764

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.41  E-value=0.56  Score=44.42  Aligned_cols=35  Identities=40%  Similarity=0.511  Sum_probs=31.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      .+.+|+|.|+|++|..++..+.+.|...+..++.+
T Consensus       134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            45689999999999999999999999889998876

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=94.41  E-value=0.44  Score=44.78  Aligned_cols=83  Identities=19%  Similarity=0.100  Sum_probs=48.6

Q ss_pred             CCCCEEEEECC-CHHHHH--HHHHHHHcCCCeEEEEecCh---h-------------HHHHHHHhCCCe-EEecCCCc-c
Q 017426          188 GPETNVLIMGA-GPIGLV--TMLAARAFGAPRIVIVDVDD---Y-------------RLSVAKEIGADN-IVKVSTNL-Q  246 (372)
Q Consensus       188 ~~g~~vlI~Ga-g~~G~~--ai~l~~~~g~~~vv~v~~~~---~-------------~~~~~~~lg~~~-v~~~~~~~-~  246 (372)
                      .-+.++||+|+ +++|.+  .++.+ ..|++ ++++....   +             -.+.+++.|... .+..|-.+ +
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~-Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E  116 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGAD-TLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE  116 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCe-EEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence            34568899987 899999  56666 88995 55554221   1             123445566432 23333332 2


Q ss_pred             cHHHHHHHHHHHcCCcceEEEeCCCcH
Q 017426          247 DIAEEVEKIQKAMGTGIDVSFDCAGLN  273 (372)
Q Consensus       247 ~~~~~~~~~~~~~~~~~d~vid~~g~~  273 (372)
                      ...+.+.++.+ ..+++|+++++.+.+
T Consensus       117 ~v~~lie~I~e-~~G~IDiLVnSaA~~  142 (398)
T PRK13656        117 IKQKVIELIKQ-DLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHH-hcCCCCEEEECCccC
Confidence            33334444433 246899999988875

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=94.41  E-value=3.4  Score=36.56  Aligned_cols=100  Identities=18%  Similarity=0.257  Sum_probs=62.8

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC-CeEEecCCCcccHHHHHHHHHHHcCC
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA-DNIVKVSTNLQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~~~~~~~~~~~  261 (372)
                      +.....++.+||-.|+|. |..+..+++ .|. .+++++.+++..+.+++... ..++..+.  ++       +. ....
T Consensus        36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d~--~~-------~~-~~~~  102 (251)
T PRK10258         36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGDI--ES-------LP-LATA  102 (251)
T ss_pred             HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcCc--cc-------Cc-CCCC
Confidence            333444678899999864 655555544 565 69999999998888876542 22222111  11       10 0135


Q ss_pred             cceEEEeCCC------cHHHHHHHHHHhccCCEEEEEcCC
Q 017426          262 GIDVSFDCAG------LNKTMSTALGATCAGGKVCLVGMG  295 (372)
Q Consensus       262 ~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g~~  295 (372)
                      .+|+|+....      -...+..+.+.|+++|.++.....
T Consensus       103 ~fD~V~s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~~  142 (251)
T PRK10258        103 TFDLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTLV  142 (251)
T ss_pred             cEEEEEECchhhhcCCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence            7999986432      124577788999999998876543

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=94.40  E-value=0.24  Score=44.19  Aligned_cols=78  Identities=21%  Similarity=0.230  Sum_probs=47.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCC-cccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+.+++++++.+.   ... ..+..|-. ..+..+.+.++.+ ..+++|++
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~-~~~~~D~~~~~~~~~~~~~~~~-~~g~id~l   81 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENY-QFVPTDVSSAEEVNHTVAEIIE-KFGRIDGL   81 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---Cce-EEEEccCCCHHHHHHHHHHHHH-HcCCCCEE
Confidence            3678999987 9999999999999999 56777666544321   111 11222222 2233333433332 23579999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      |.+.|.
T Consensus        82 i~~Ag~   87 (266)
T PRK06171         82 VNNAGI   87 (266)
T ss_pred             EECCcc
Confidence            998773

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=94.39  E-value=0.43  Score=43.93  Aligned_cols=81  Identities=22%  Similarity=0.330  Sum_probs=49.5

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC-CCeEEEEecChhHHH-HHHHhCCC----eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFG-APRIVIVDVDDYRLS-VAKEIGAD----NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~-~~~~lg~~----~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      +.++||+|+ +++|.++++.+...| + .|+.+.+++++.+ ..++++..    ..+..|-.+ .+..+.+.++.+ ..+
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~~   80 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRE-SGR   80 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHH-hCC
Confidence            568999998 999999998888889 7 5777777766554 33444321    122222222 223333333322 235


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus        81 ~iD~lI~nAG~   91 (314)
T TIGR01289        81 PLDALVCNAAV   91 (314)
T ss_pred             CCCEEEECCCc
Confidence            79999998763

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=94.39  E-value=0.7  Score=41.15  Aligned_cols=99  Identities=24%  Similarity=0.280  Sum_probs=65.5

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC-CeEEecCCCcccHHHHHHHHHHHcC
Q 017426          182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA-DNIVKVSTNLQDIAEEVEKIQKAMG  260 (372)
Q Consensus       182 l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~~~~~~~~~~  260 (372)
                      +....++++++||=+|+|. |..+..+++..+...|++++.++...+.+++.-. ..++.     .+..    ++.  ..
T Consensus        24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~-----~d~~----~~~--~~   91 (258)
T PRK01683         24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVE-----ADIA----SWQ--PP   91 (258)
T ss_pred             HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEE-----Cchh----ccC--CC
Confidence            3445667889999998753 6777788877654479999999998887765432 11221     1111    111  13


Q ss_pred             CcceEEEeCCC------cHHHHHHHHHHhccCCEEEEE
Q 017426          261 TGIDVSFDCAG------LNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       261 ~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~  292 (372)
                      ..+|+|+....      ....+..+.+.|+++|.++..
T Consensus        92 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~  129 (258)
T PRK01683         92 QALDLIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ  129 (258)
T ss_pred             CCccEEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence            57999975432      124677888999999998875

>PRK06123 short chain dehydrogenase; Provisional

Probab=94.35  E-value=0.48  Score=41.61  Aligned_cols=81  Identities=20%  Similarity=0.254  Sum_probs=47.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe-cChhHHHH----HHHhCCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD-VDDYRLSV----AKEIGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~-~~~~~~~~----~~~lg~~~-v~~~~~~-~~~~~~~~~~~~~~~~~  261 (372)
                      +.++||.|+ |.+|..+++.+...|+. ++.+. +++++.+.    ++..+... .+..+-. ..++.+.+.++.+. .+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~-vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   79 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYA-VCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRE-LG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCe-EEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHH-hC
Confidence            457899987 99999999888889985 44443 44443322    22334322 2222222 23344444443332 35


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|.+.|.
T Consensus        80 ~id~li~~ag~   90 (248)
T PRK06123         80 RLDALVNNAGI   90 (248)
T ss_pred             CCCEEEECCCC
Confidence            79999998764

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=94.34  E-value=0.71  Score=40.40  Aligned_cols=34  Identities=24%  Similarity=0.445  Sum_probs=29.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      ..+|+|.|+|++|..++..+-+.|...+..++.+
T Consensus        11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755          11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4689999999999999999999999888888644

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=94.33  E-value=0.33  Score=40.31  Aligned_cols=92  Identities=17%  Similarity=0.215  Sum_probs=58.0

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCC
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  270 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  270 (372)
                      +|.|+|| |-+|..+++=|...|-+ |.++.+++.|....+...+..--.     .++.. +.+.    -.++|+||++.
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHe-VTAivRn~~K~~~~~~~~i~q~Di-----fd~~~-~a~~----l~g~DaVIsA~   70 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHE-VTAIVRNASKLAARQGVTILQKDI-----FDLTS-LASD----LAGHDAVISAF   70 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCe-eEEEEeChHhccccccceeecccc-----cChhh-hHhh----hcCCceEEEec
Confidence            5788888 99999999999999985 677778888875543222111001     11111 1111    26899999988


Q ss_pred             CcH---------HHHHHHHHHhccC--CEEEEEcC
Q 017426          271 GLN---------KTMSTALGATCAG--GKVCLVGM  294 (372)
Q Consensus       271 g~~---------~~~~~~~~~l~~~--G~~v~~g~  294 (372)
                      +..         ...+.++..|+..  -|+..+|.
T Consensus        71 ~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGG  105 (211)
T COG2910          71 GAGASDNDELHSKSIEALIEALKGAGVPRLLVVGG  105 (211)
T ss_pred             cCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcC
Confidence            764         1234466667653  36777764

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=94.33  E-value=0.4  Score=42.27  Aligned_cols=77  Identities=19%  Similarity=0.243  Sum_probs=47.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCC-eEEecCCC-cccHHHHHHHHHHHcCCcceE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~d~  265 (372)
                      .+.++||+|+ |.+|..+++.+...|+ .|+.++++.     ....+.. ..+..|-. .+++.+.+.++.+ ..+++|+
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~   79 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLA-ETGPLDV   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHH-HcCCCCE
Confidence            3678999998 9999999999888998 467776654     1222211 12222222 2233333333332 2357999


Q ss_pred             EEeCCCc
Q 017426          266 SFDCAGL  272 (372)
Q Consensus       266 vid~~g~  272 (372)
                      +|.+.|.
T Consensus        80 vi~~ag~   86 (252)
T PRK08220         80 LVNAAGI   86 (252)
T ss_pred             EEECCCc
Confidence            9998774

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=94.31  E-value=0.29  Score=43.59  Aligned_cols=82  Identities=18%  Similarity=0.223  Sum_probs=46.3

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCeEEEEecCh---hHHHHHHHh----CCCeEEecCCCc-ccHHHHHHHHHH
Q 017426          189 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDD---YRLSVAKEI----GADNIVKVSTNL-QDIAEEVEKIQK  257 (372)
Q Consensus       189 ~g~~vlI~Ga---g~~G~~ai~l~~~~g~~~vv~v~~~~---~~~~~~~~l----g~~~v~~~~~~~-~~~~~~~~~~~~  257 (372)
                      .|.++||+|+   +++|.++++.+...|++ |+.+.++.   +..+.++++    +....+..|-.+ ++..+.+.+..+
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   83 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAE-LGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ   83 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCE-EEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence            4678999986   48999999999899995 55543221   122223222    211222223222 233334444333


Q ss_pred             HcCCcceEEEeCCCc
Q 017426          258 AMGTGIDVSFDCAGL  272 (372)
Q Consensus       258 ~~~~~~d~vid~~g~  272 (372)
                       ..+++|+++++.|.
T Consensus        84 -~~g~iD~lv~nag~   97 (258)
T PRK07370         84 -KWGKLDILVHCLAF   97 (258)
T ss_pred             -HcCCCCEEEEcccc
Confidence             23579999998873

>PRK06101 short chain dehydrogenase; Provisional

Probab=94.30  E-value=0.42  Score=41.91  Aligned_cols=41  Identities=27%  Similarity=0.268  Sum_probs=33.0

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE  232 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~  232 (372)
                      .++||+|+ |++|..++..+...|+ .|+++++++++.+.+.+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~   43 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHT   43 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH
Confidence            46899987 9999998888888999 57778888877665544

>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []

Probab=94.29  E-value=0.21  Score=43.85  Aligned_cols=107  Identities=24%  Similarity=0.346  Sum_probs=62.3

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHH
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      +....++|++||=.|+| .|..+..+++..+. ..|++++.+++-.+.+++    .+...+.....+.+++.     +  
T Consensus        41 ~~~~~~~g~~vLDv~~G-tG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~lp-----~--  112 (233)
T PF01209_consen   41 KLLGLRPGDRVLDVACG-TGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDLP-----F--  112 (233)
T ss_dssp             HHHT--S--EEEEET-T-TSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB-------S--
T ss_pred             hccCCCCCCEEEEeCCC-hHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHhc-----C--
Confidence            44567899999988764 36777788887653 279999999987776654    23322211112112221     0  


Q ss_pred             HcCCcceEEEeCCCc------HHHHHHHHHHhccCCEEEEEcCCCCC
Q 017426          258 AMGTGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVGMGHHE  298 (372)
Q Consensus       258 ~~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~~~~~  298 (372)
                       ....+|+|.-+.|-      ...+..+.+.|+|+|+++.+....+.
T Consensus       113 -~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~~p~  158 (233)
T PF01209_consen  113 -PDNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFSKPR  158 (233)
T ss_dssp             --TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEEB-S
T ss_pred             -CCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeeccCCC
Confidence             14679999876554      24678899999999999998765544

Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.

>PRK08278 short chain dehydrogenase; Provisional

Probab=94.26  E-value=0.54  Score=42.22  Aligned_cols=82  Identities=26%  Similarity=0.278  Sum_probs=48.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhH--------HHH---HHHhCCCe-EEecCCC-cccHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR--------LSV---AKEIGADN-IVKVSTN-LQDIAEEVEK  254 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~--------~~~---~~~lg~~~-v~~~~~~-~~~~~~~~~~  254 (372)
                      .+.++||+|+ |.+|..+++.+...|+ .|+++.++.+.        .+.   ++..+... .+..|-. .++..+.+.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   83 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK   83 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            4578999998 9999999999888999 46666665431        111   22233321 2222221 2233333333


Q ss_pred             HHHHcCCcceEEEeCCCc
Q 017426          255 IQKAMGTGIDVSFDCAGL  272 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~  272 (372)
                      ..+. .+.+|++|++.|.
T Consensus        84 ~~~~-~g~id~li~~ag~  100 (273)
T PRK08278         84 AVER-FGGIDICVNNASA  100 (273)
T ss_pred             HHHH-hCCCCEEEECCCC
Confidence            3322 2479999998874

>TIGR02415 23BDH acetoin reductases

Probab=94.25  E-value=0.36  Score=42.64  Aligned_cols=79  Identities=20%  Similarity=0.270  Sum_probs=48.0

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHH---hCCC-eEEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKE---IGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~---lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      ++||.|+ |.+|..+++.+...|+ .++.+.+++++.+ ..+.   .+.. ..+..|-.+ ++..+.+.++.+. .+++|
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~~~id   79 (254)
T TIGR02415         2 VALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEK-FGGFD   79 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cCCCC
Confidence            6899987 9999999999999998 5777767665443 2222   2322 122222222 2233334443332 35799


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|.+.|.
T Consensus        80 ~vi~~ag~   87 (254)
T TIGR02415        80 VMVNNAGV   87 (254)
T ss_pred             EEEECCCc
Confidence            99998864

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=94.21  E-value=0.51  Score=38.86  Aligned_cols=90  Identities=14%  Similarity=0.155  Sum_probs=57.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCC
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  271 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  271 (372)
                      +|-++|.|.+|...++-+...|+ .|.+.++++++.+.+.+.|+...       .+    ..++.    ...|+||-++.
T Consensus         3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-------~s----~~e~~----~~~dvvi~~v~   66 (163)
T PF03446_consen    3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA-------DS----PAEAA----EQADVVILCVP   66 (163)
T ss_dssp             EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE-------SS----HHHHH----HHBSEEEE-SS
T ss_pred             EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh-------hh----hhhHh----hcccceEeecc
Confidence            67889999999999999989999 58888999999888887774332       12    22222    24699999888


Q ss_pred             cHHHHHHHHH------HhccCCEEEEEcCCCC
Q 017426          272 LNKTMSTALG------ATCAGGKVCLVGMGHH  297 (372)
Q Consensus       272 ~~~~~~~~~~------~l~~~G~~v~~g~~~~  297 (372)
                      ........+.      .+.++..++.++...+
T Consensus        67 ~~~~v~~v~~~~~i~~~l~~g~iiid~sT~~p   98 (163)
T PF03446_consen   67 DDDAVEAVLFGENILAGLRPGKIIIDMSTISP   98 (163)
T ss_dssp             SHHHHHHHHHCTTHGGGS-TTEEEEE-SS--H
T ss_pred             cchhhhhhhhhhHHhhccccceEEEecCCcch
Confidence            7655555444      3445556666654443

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=94.19  E-value=0.21  Score=50.90  Aligned_cols=77  Identities=22%  Similarity=0.292  Sum_probs=52.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChh---------------------HHHHHHHhCCCeEEecCCCccc
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY---------------------RLSVAKEIGADNIVKVSTNLQD  247 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~---------------------~~~~~~~lg~~~v~~~~~~~~~  247 (372)
                      .+++|+|+|+|+.|+.++..++..|.+ |++.+..+.                     +.++++++|++......- ..+
T Consensus       309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~-Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v-~~~  386 (639)
T PRK12809        309 RSEKVAVIGAGPAGLGCADILARAGVQ-VDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEI-GRD  386 (639)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCCc-EEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCcc-CCc
Confidence            489999999999999999999999995 677766652                     456677788764433211 111


Q ss_pred             HHHHHHHHHHHcCCcceEEEeCCCcH
Q 017426          248 IAEEVEKIQKAMGTGIDVSFDCAGLN  273 (372)
Q Consensus       248 ~~~~~~~~~~~~~~~~d~vid~~g~~  273 (372)
                      .  .+.++    ..++|.||.++|..
T Consensus       387 ~--~~~~l----~~~~DaV~latGa~  406 (639)
T PRK12809        387 I--TFSDL----TSEYDAVFIGVGTY  406 (639)
T ss_pred             C--CHHHH----HhcCCEEEEeCCCC
Confidence            1  12222    24699999999864

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.18  E-value=0.36  Score=42.26  Aligned_cols=81  Identities=30%  Similarity=0.392  Sum_probs=47.5

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE-ecChhHHHHH-HHh---CCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSVA-KEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v-~~~~~~~~~~-~~l---g~~-~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      +.++||.|+ |.+|..++..+...|++ ++++ .+++++.+.+ ..+   +.. .++..+-.+ .++.+.+..+.+. .+
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~-v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   82 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAK-VVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEK-FG   82 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hC
Confidence            468999988 99999999888888985 5665 6766554332 222   221 122222222 2233333333221 24


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|.+.|.
T Consensus        83 ~id~vi~~ag~   93 (247)
T PRK05565         83 KIDILVNNAGI   93 (247)
T ss_pred             CCCEEEECCCc
Confidence            79999987764

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=94.14  E-value=1.3  Score=37.34  Aligned_cols=99  Identities=21%  Similarity=0.337  Sum_probs=62.1

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHHH
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      ....+.++++||=.|+|. |..++.+++......+++++.+++..+.+++    ++...+.....   +...   .+   
T Consensus        25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~---d~~~---~~---   94 (187)
T PRK08287         25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG---EAPI---EL---   94 (187)
T ss_pred             HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec---Cchh---hc---
Confidence            445667888988888753 6666677776543479999999987666543    44333222111   1111   11   


Q ss_pred             cCCcceEEEeCCC---cHHHHHHHHHHhccCCEEEEE
Q 017426          259 MGTGIDVSFDCAG---LNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       259 ~~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~  292 (372)
                       ...+|+|+....   -...+..+.+.|+++|+++..
T Consensus        95 -~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~  130 (187)
T PRK08287         95 -PGKADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT  130 (187)
T ss_pred             -CcCCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence             357999985432   123566788999999998764

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=94.10  E-value=0.62  Score=40.50  Aligned_cols=95  Identities=22%  Similarity=0.260  Sum_probs=61.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeE--EecCCCcccHHHHHHHHHHHcCCcceE
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI--VKVSTNLQDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v--~~~~~~~~~~~~~~~~~~~~~~~~~d~  265 (372)
                      -+|.+||=.|||+ |++..-+| ++|+ .|.+++.+++..+.++......-  ++|..      ..+.++.. .++.||+
T Consensus        58 l~g~~vLDvGCGg-G~Lse~mA-r~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~------~~~edl~~-~~~~FDv  127 (243)
T COG2227          58 LPGLRVLDVGCGG-GILSEPLA-RLGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ------ATVEDLAS-AGGQFDV  127 (243)
T ss_pred             CCCCeEEEecCCc-cHhhHHHH-HCCC-eeEEecCChHHHHHHHHhhhhccccccchh------hhHHHHHh-cCCCccE
Confidence            3778888888743 45544444 5677 69999999999998886443222  22322      12333332 2478999


Q ss_pred             EEe-----CCCcHH-HHHHHHHHhccCCEEEEE
Q 017426          266 SFD-----CAGLNK-TMSTALGATCAGGKVCLV  292 (372)
Q Consensus       266 vid-----~~g~~~-~~~~~~~~l~~~G~~v~~  292 (372)
                      |+.     .+..++ -+..+...++|+|.+..-
T Consensus       128 V~cmEVlEHv~dp~~~~~~c~~lvkP~G~lf~S  160 (243)
T COG2227         128 VTCMEVLEHVPDPESFLRACAKLVKPGGILFLS  160 (243)
T ss_pred             EEEhhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence            975     445443 455788899999987654

>PRK03612 spermidine synthase; Provisional

Probab=94.10  E-value=0.53  Score=46.64  Aligned_cols=98  Identities=16%  Similarity=0.147  Sum_probs=62.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC-C----------CeEEecCCCcccHHHHHHHHH
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG-A----------DNIVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg-~----------~~v~~~~~~~~~~~~~~~~~~  256 (372)
                      ++.++||+.|+| .|..+..++++.+.+.+.+++.+++-.+.+++.. .          +.+...   ..|..+.+++  
T Consensus       296 ~~~~rVL~IG~G-~G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi---~~Da~~~l~~--  369 (521)
T PRK03612        296 ARPRRVLVLGGG-DGLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVV---NDDAFNWLRK--  369 (521)
T ss_pred             CCCCeEEEEcCC-ccHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEE---EChHHHHHHh--
Confidence            556899999875 3566667776545468999999999999888721 0          111110   1232222322  


Q ss_pred             HHcCCcceEEEeCCCcH-----------HHHHHHHHHhccCCEEEEEc
Q 017426          257 KAMGTGIDVSFDCAGLN-----------KTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~~-----------~~~~~~~~~l~~~G~~v~~g  293 (372)
                        ..+.+|+|+-....+           +.++.+.+.|+++|.++...
T Consensus       370 --~~~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~~  415 (521)
T PRK03612        370 --LAEKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQS  415 (521)
T ss_pred             --CCCCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEec
Confidence              246899998533211           24567889999999988754

>PRK06141 ornithine cyclodeaminase; Validated

Probab=94.09  E-value=0.93  Score=41.77  Aligned_cols=94  Identities=18%  Similarity=0.190  Sum_probs=58.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEecChhHHH-HHHHhCCC--eEEecCCCcccHHHHHHHHHHHcCCcc
Q 017426          188 GPETNVLIMGAGPIGLVTMLAAR-AFGAPRIVIVDVDDYRLS-VAKEIGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~-~~g~~~vv~v~~~~~~~~-~~~~lg~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      +...+++|+|+|..|...+..+. ..+.+.|.+.++++++.+ +++.+...  .+...    .+..+.+        ...
T Consensus       123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~----~~~~~av--------~~a  190 (314)
T PRK06141        123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVV----TDLEAAV--------RQA  190 (314)
T ss_pred             CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEe----CCHHHHH--------hcC
Confidence            55678999999999999876444 467778899999887755 44444311  12221    1222221        479


Q ss_pred             eEEEeCCCcHHHHHHHHHHhccCCEEEEEcC
Q 017426          264 DVSFDCAGLNKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       264 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      |+|+.++++...+ .-.+.++++-.+..+|.
T Consensus       191 DIVi~aT~s~~pv-l~~~~l~~g~~i~~ig~  220 (314)
T PRK06141        191 DIISCATLSTEPL-VRGEWLKPGTHLDLVGN  220 (314)
T ss_pred             CEEEEeeCCCCCE-ecHHHcCCCCEEEeeCC
Confidence            9999988865221 11256777665555553

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=94.07  E-value=0.79  Score=39.98  Aligned_cols=104  Identities=20%  Similarity=0.255  Sum_probs=64.3

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHH
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      ....++++++||=.|+|. |..+..+++..+. ..+++++.+++..+.+++    .+.+.+.....   +..    ++. 
T Consensus        39 ~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~---d~~----~~~-  109 (231)
T TIGR02752        39 KRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHG---NAM----ELP-  109 (231)
T ss_pred             HhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEe---chh----cCC-
Confidence            456778899999998753 5666777777542 379999999887766653    23322211111   110    010 


Q ss_pred             HcCCcceEEEeCCC------cHHHHHHHHHHhccCCEEEEEcCC
Q 017426          258 AMGTGIDVSFDCAG------LNKTMSTALGATCAGGKVCLVGMG  295 (372)
Q Consensus       258 ~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g~~  295 (372)
                      ...+.+|+|+-...      ....+..+.+.|+++|.++.....
T Consensus       110 ~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~  153 (231)
T TIGR02752       110 FDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLETS  153 (231)
T ss_pred             CCCCCccEEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEECC
Confidence            01357999975321      123566788999999999876543

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.07  E-value=0.63  Score=41.37  Aligned_cols=82  Identities=16%  Similarity=0.315  Sum_probs=48.1

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCeEEEEecCh--hHHH-HHHHhCCC-eEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDD--YRLS-VAKEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga---g~~G~~ai~l~~~~g~~~vv~v~~~~--~~~~-~~~~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.+++|+|+   +++|.++++.+...|+ .|+.++++.  +..+ ..++++.. ..+..|-.+ ++..+.+.+..+ ..
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~-~~   83 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVRE-HV   83 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHH-Hc
Confidence            4678999985   7899999998888999 466665442  3222 33444421 122233222 223333333332 23


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus        84 g~iD~li~nAG~   95 (256)
T PRK07889         84 DGLDGVVHSIGF   95 (256)
T ss_pred             CCCcEEEEcccc
Confidence            679999998764

>PRK12827 short chain dehydrogenase; Provisional

Probab=94.06  E-value=0.52  Score=41.34  Aligned_cols=81  Identities=17%  Similarity=0.229  Sum_probs=45.5

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEec----ChhHHHHH-H---HhCCC-eEEecCCCcc-cHHHHHHHHHHH
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV----DDYRLSVA-K---EIGAD-NIVKVSTNLQ-DIAEEVEKIQKA  258 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~----~~~~~~~~-~---~lg~~-~v~~~~~~~~-~~~~~~~~~~~~  258 (372)
                      +.++||.|+ |.+|..++..+...|++ ++++.+    +.++.+.+ +   ..+.. ..+..+-.+. +..+.+..+.+ 
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-   83 (249)
T PRK12827          6 SRRVLITGGSGGLGRAIAVRLAADGAD-VIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE-   83 (249)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCe-EEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-
Confidence            568999998 99999999988889995 555332    23332221 2   22322 1222232222 22333333322 


Q ss_pred             cCCcceEEEeCCCc
Q 017426          259 MGTGIDVSFDCAGL  272 (372)
Q Consensus       259 ~~~~~d~vid~~g~  272 (372)
                      ..+++|.+|.+.|.
T Consensus        84 ~~~~~d~vi~~ag~   97 (249)
T PRK12827         84 EFGRLDILVNNAGI   97 (249)
T ss_pred             HhCCCCEEEECCCC
Confidence            23579999998774

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=94.04  E-value=0.6  Score=44.48  Aligned_cols=82  Identities=22%  Similarity=0.297  Sum_probs=48.3

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-------HHHHhCCCeEEecCCCcccHHHHHHHHHHH
Q 017426          187 IGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-------VAKEIGADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       187 ~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-------~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      -..+.+|||+|+ |.+|..+++.+...|.+ |+++.++.++.+       ......-..++..|-.+.   +.+.+..+.
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~-V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~---~~l~~~~~~  132 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYN-VVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDA---DSLRKVLFS  132 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEEechhhccccchhhHHhhhcCCceEEEeeCCCH---HHHHHHHHH
Confidence            356779999998 99999999999889984 676767654321       111222122232222221   233333321


Q ss_pred             cCCcceEEEeCCCc
Q 017426          259 MGTGIDVSFDCAGL  272 (372)
Q Consensus       259 ~~~~~d~vid~~g~  272 (372)
                      .+.++|+||+|.+.
T Consensus       133 ~~~~~D~Vi~~aa~  146 (390)
T PLN02657        133 EGDPVDVVVSCLAS  146 (390)
T ss_pred             hCCCCcEEEECCcc
Confidence            12279999998764

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=93.98  E-value=1.6  Score=39.93  Aligned_cols=31  Identities=26%  Similarity=0.284  Sum_probs=26.2

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCeEEEE
Q 017426          189 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIV  220 (372)
Q Consensus       189 ~g~~vlI~Ga---g~~G~~ai~l~~~~g~~~vv~v  220 (372)
                      .|.++||+|+   +++|.++++.+...|++ |+..
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~-Vv~~   41 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGAE-ILVG   41 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCE-EEEE
Confidence            4788999987   88999999999999995 5543

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=93.92  E-value=0.85  Score=43.00  Aligned_cols=35  Identities=31%  Similarity=0.539  Sum_probs=30.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      ...+|+|.|+|++|..++..+.+.|...+..++.+
T Consensus        40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            35689999999999999999999999888888655

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=93.91  E-value=1.1  Score=39.25  Aligned_cols=105  Identities=21%  Similarity=0.240  Sum_probs=65.2

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHHHc
Q 017426          185 ANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       185 ~~~~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      .+..+..+||-.|.| .|..++.+++.++ ...+++++.+++..+.+++    .|...-+.+  ...+..+.+.++....
T Consensus        64 ~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~--~~gda~~~L~~l~~~~  140 (234)
T PLN02781         64 VKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINF--IQSDALSALDQLLNND  140 (234)
T ss_pred             HHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEE--EEccHHHHHHHHHhCC
Confidence            445567899988853 3666666777653 3479999999988776654    454322221  1234444444443211


Q ss_pred             -CCcceEEEeCCC---cHHHHHHHHHHhccCCEEEEE
Q 017426          260 -GTGIDVSFDCAG---LNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       260 -~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~  292 (372)
                       ...||+||--..   ....++.+.+.|+++|.++.-
T Consensus       141 ~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~d  177 (234)
T PLN02781        141 PKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFD  177 (234)
T ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence             357999985432   234677888999999987753

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=93.88  E-value=0.87  Score=41.23  Aligned_cols=129  Identities=22%  Similarity=0.298  Sum_probs=72.2

Q ss_pred             CceEECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH--
Q 017426          155 DLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE--  232 (372)
Q Consensus       155 ~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~--  232 (372)
                      ...+++.+++.|-..... +-.....+++. .+++|.++|=.|+|. |.++|.. ..+|+..+++++.++...+.+++  
T Consensus       130 ~~~i~lDPGlAFGTG~Hp-TT~lcL~~Le~-~~~~g~~vlDvGcGS-GILaIAa-~kLGA~~v~g~DiDp~AV~aa~eNa  205 (300)
T COG2264         130 ELNIELDPGLAFGTGTHP-TTSLCLEALEK-LLKKGKTVLDVGCGS-GILAIAA-AKLGAKKVVGVDIDPQAVEAARENA  205 (300)
T ss_pred             ceEEEEccccccCCCCCh-hHHHHHHHHHH-hhcCCCEEEEecCCh-hHHHHHH-HHcCCceEEEecCCHHHHHHHHHHH
Confidence            456777776655322111 11112233332 346888988888742 4444433 45698899999999987666554  


Q ss_pred             -h-CCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcH---HHHHHHHHHhccCCEEEEEcCC
Q 017426          233 -I-GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN---KTMSTALGATCAGGKVCLVGMG  295 (372)
Q Consensus       233 -l-g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~  295 (372)
                       + +........  ....   ....   .++++|+|+..+=..   .......+.++|+|+++..|..
T Consensus       206 ~~N~v~~~~~~~--~~~~---~~~~---~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl  265 (300)
T COG2264         206 RLNGVELLVQAK--GFLL---LEVP---ENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGIL  265 (300)
T ss_pred             HHcCCchhhhcc--cccc---hhhc---ccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeeh
Confidence             2 222100000  0000   0011   146899999654221   2455677889999999988753

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=93.79  E-value=1  Score=40.05  Aligned_cols=96  Identities=20%  Similarity=0.280  Sum_probs=60.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh----CCC-eEEecCCCcccHHHHHHHHHHHcCCc
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GAD-NIVKVSTNLQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~  262 (372)
                      .++.+||=.|+|. |..+..+++. |. .|++++.+++..+.+++.    |.. .+....   .+..+ +...   ..+.
T Consensus        43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~---~d~~~-l~~~---~~~~  112 (255)
T PRK11036         43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH---CAAQD-IAQH---LETP  112 (255)
T ss_pred             CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEE---cCHHH-Hhhh---cCCC
Confidence            4567888888753 6777777765 66 689999999888777653    321 111111   12111 1111   2467


Q ss_pred             ceEEEeCC-----Cc-HHHHHHHHHHhccCCEEEEEc
Q 017426          263 IDVSFDCA-----GL-NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       263 ~d~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      +|+|+...     .. ...+..+.+.|+|+|.++.+-
T Consensus       113 fD~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~  149 (255)
T PRK11036        113 VDLILFHAVLEWVADPKSVLQTLWSVLRPGGALSLMF  149 (255)
T ss_pred             CCEEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            99998532     12 245778899999999997653

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=93.79  E-value=0.22  Score=50.87  Aligned_cols=36  Identities=28%  Similarity=0.446  Sum_probs=30.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      ..+.+|+|+|+|+.|++++..++..|++ |++.+..+
T Consensus       325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~~-V~V~E~~~  360 (654)
T PRK12769        325 KSDKRVAIIGAGPAGLACADVLARNGVA-VTVYDRHP  360 (654)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCe-EEEEecCC
Confidence            3588999999999999999999999995 77776643

>PLN00203 glutamyl-tRNA reductase

Probab=93.79  E-value=0.4  Score=47.22  Aligned_cols=74  Identities=22%  Similarity=0.384  Sum_probs=51.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      +.+|+|+|+|.+|.++++.+...|+..++++.++.++.+.+ ..++...+. +    ..+.+ +.+.    -..+|+||.
T Consensus       266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~-~----~~~~d-l~~a----l~~aDVVIs  335 (519)
T PLN00203        266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII-Y----KPLDE-MLAC----AAEADVVFT  335 (519)
T ss_pred             CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE-e----ecHhh-HHHH----HhcCCEEEE
Confidence            67899999999999999999999987788888988876654 455421111 1    01111 2222    157999999


Q ss_pred             CCCcH
Q 017426          269 CAGLN  273 (372)
Q Consensus       269 ~~g~~  273 (372)
                      |++.+
T Consensus       336 AT~s~  340 (519)
T PLN00203        336 STSSE  340 (519)
T ss_pred             ccCCC
Confidence            98765

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=93.78  E-value=0.67  Score=41.37  Aligned_cols=79  Identities=16%  Similarity=0.156  Sum_probs=44.6

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEE-ecChhHHH-HHHHhC----CCe-EEecCCCccc-H----HHHHHHHHHH
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLS-VAKEIG----ADN-IVKVSTNLQD-I----AEEVEKIQKA  258 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v-~~~~~~~~-~~~~lg----~~~-v~~~~~~~~~-~----~~~~~~~~~~  258 (372)
                      .+||+|+ +++|.++++.+...|++ |+.+ .+++++.+ .++++.    ... .+..|-.+.+ .    .+.+.+..+ 
T Consensus         3 ~~lITGas~gIG~~~a~~l~~~G~~-V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~-   80 (267)
T TIGR02685         3 AAVVTGAAKRIGSSIAVALHQEGYR-VVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFR-   80 (267)
T ss_pred             EEEEeCCCCcHHHHHHHHHHhCCCe-EEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHH-
Confidence            6889997 99999999999999995 5554 34444433 334442    111 2222222221 1    112222211 


Q ss_pred             cCCcceEEEeCCCc
Q 017426          259 MGTGIDVSFDCAGL  272 (372)
Q Consensus       259 ~~~~~d~vid~~g~  272 (372)
                      ..+++|++|.+.|.
T Consensus        81 ~~g~iD~lv~nAG~   94 (267)
T TIGR02685        81 AFGRCDVLVNNASA   94 (267)
T ss_pred             ccCCceEEEECCcc
Confidence            23579999998773

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07069 short chain dehydrogenase; Validated

Probab=93.74  E-value=0.58  Score=41.12  Aligned_cols=79  Identities=20%  Similarity=0.287  Sum_probs=46.5

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecC-hhHHHH-HHHhC----CCeE--EecCC-CcccHHHHHHHHHHHcCC
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD-DYRLSV-AKEIG----ADNI--VKVST-NLQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~-~~~~~~-~~~lg----~~~v--~~~~~-~~~~~~~~~~~~~~~~~~  261 (372)
                      ++||+|+ |.+|..+++.+...|+ .|++++++ .++.+. .+.+.    ...+  +..|- +.+++.+.+.+..+ .-+
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   78 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGA-KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAAD-AMG   78 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHH-HcC
Confidence            3789987 9999999999988998 46777665 444332 22322    1111  22221 22334444443332 235


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|.+.|.
T Consensus        79 ~id~vi~~ag~   89 (251)
T PRK07069         79 GLSVLVNNAGV   89 (251)
T ss_pred             CccEEEECCCc
Confidence            79999998763

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=93.74  E-value=1.3  Score=41.06  Aligned_cols=93  Identities=18%  Similarity=0.194  Sum_probs=59.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEecChhHHH-HHHHh----CCCeEEecCCCcccHHHHHHHHHHHcCC
Q 017426          188 GPETNVLIMGAGPIGLVTMLAAR-AFGAPRIVIVDVDDYRLS-VAKEI----GADNIVKVSTNLQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~-~~g~~~vv~v~~~~~~~~-~~~~l----g~~~v~~~~~~~~~~~~~~~~~~~~~~~  261 (372)
                      +...+++|+|+|..+.+.+..+. ..+++.+.+..++.++.+ +++.+    |.. +..+    .+..+.+        .
T Consensus       127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~----~~~~~av--------~  193 (326)
T TIGR02992       127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA----TDPRAAM--------S  193 (326)
T ss_pred             CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe----CCHHHHh--------c
Confidence            45568999999999988777765 578888889989887755 44444    432 2221    1222222        4


Q ss_pred             cceEEEeCCCcHHHHHHHHHHhccCCEEEEEcC
Q 017426          262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       262 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      ..|+|+.|+++...+ .....++++-.+..+|.
T Consensus       194 ~aDiVvtaT~s~~p~-i~~~~l~~g~~i~~vg~  225 (326)
T TIGR02992       194 GADIIVTTTPSETPI-LHAEWLEPGQHVTAMGS  225 (326)
T ss_pred             cCCEEEEecCCCCcE-ecHHHcCCCcEEEeeCC
Confidence            799999998864321 12345777666666764

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PRK06940 short chain dehydrogenase; Provisional

Probab=93.71  E-value=0.74  Score=41.39  Aligned_cols=78  Identities=21%  Similarity=0.328  Sum_probs=46.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHh---CCC-eEEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          191 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~l---g~~-~v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      ..++|.|+|.+|.+++..+. .|+ .|+.+++++++.+. .+++   +.. ..+..|-.+ ++..+.+.+. +. .+++|
T Consensus         3 k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~-~g~id   78 (275)
T PRK06940          3 EVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QT-LGPVT   78 (275)
T ss_pred             CEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-Hh-cCCCC
Confidence            56788898999999888885 788 57777777665432 2333   322 122223222 2333333333 21 35799


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|++.|.
T Consensus        79 ~li~nAG~   86 (275)
T PRK06940         79 GLVHTAGV   86 (275)
T ss_pred             EEEECCCc
Confidence            99998874

>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed

Probab=93.70  E-value=2  Score=37.39  Aligned_cols=105  Identities=18%  Similarity=0.278  Sum_probs=65.1

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHHhCC----CeEEecCCCcccHHHHHHHHHH
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKEIGA----DNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~lg~----~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      +.....++.+||-.|+|. |..+..+++..+ ...+++++.+++..+.+++.-.    ...+.+..  .++.+    .. 
T Consensus        45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~--~d~~~----~~-  116 (239)
T PRK00216         45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQ--GDAEA----LP-  116 (239)
T ss_pred             HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEe--ccccc----CC-
Confidence            444556788999999876 778888888775 2379999999988777765321    11111100  11110    00 


Q ss_pred             HcCCcceEEEeCC------CcHHHHHHHHHHhccCCEEEEEcCC
Q 017426          258 AMGTGIDVSFDCA------GLNKTMSTALGATCAGGKVCLVGMG  295 (372)
Q Consensus       258 ~~~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~v~~g~~  295 (372)
                      ...+.+|+|+...      .....+..+.+.|+++|.++.+...
T Consensus       117 ~~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~gG~li~~~~~  160 (239)
T PRK00216        117 FPDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPGGRLVILEFS  160 (239)
T ss_pred             CCCCCccEEEEecccccCCCHHHHHHHHHHhccCCcEEEEEEec
Confidence            0135699987432      1234667888899999999887543

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=93.68  E-value=1.1  Score=38.10  Aligned_cols=92  Identities=20%  Similarity=0.192  Sum_probs=55.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChh-------------------H----HHHHHHhCCCeEEecCCCcc
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY-------------------R----LSVAKEIGADNIVKVSTNLQ  246 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~-------------------~----~~~~~~lg~~~v~~~~~~~~  246 (372)
                      ..+|+|.|+|++|.-++..+-..|...+..++.+.=                   |    .+.+++++.+-.+....  .
T Consensus        21 ~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~--~   98 (197)
T cd01492          21 SARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT--D   98 (197)
T ss_pred             hCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe--c
Confidence            468999999999999999999999988888864410                   1    22345555443332211  1


Q ss_pred             cHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCC
Q 017426          247 DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGG  287 (372)
Q Consensus       247 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G  287 (372)
                      .+.+...++    -.++|+|++|..........-+.+...+
T Consensus        99 ~~~~~~~~~----~~~~dvVi~~~~~~~~~~~ln~~c~~~~  135 (197)
T cd01492          99 DISEKPEEF----FSQFDVVVATELSRAELVKINELCRKLG  135 (197)
T ss_pred             CccccHHHH----HhCCCEEEECCCCHHHHHHHHHHHHHcC
Confidence            111111122    2579999999887644334444444444

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]

Probab=93.65  E-value=2.3  Score=39.47  Aligned_cols=131  Identities=25%  Similarity=0.241  Sum_probs=78.2

Q ss_pred             EEEEECCCHHH-HHHHHHHHHcC--CCeEEEEecChhHHH-HHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          192 NVLIMGAGPIG-LVTMLAARAFG--APRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       192 ~vlI~Gag~~G-~~ai~l~~~~g--~~~vv~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      ++.|+|+|.++ ...+...+..+  +..+.++++++++.+ ++++++....  |    .++.+    +.+  ...+|+|+
T Consensus         5 rvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~--~----~~~~~----ll~--~~~iD~V~   72 (342)
T COG0673           5 RVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIAKA--Y----TDLEE----LLA--DPDIDAVY   72 (342)
T ss_pred             EEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCCcc--c----CCHHH----Hhc--CCCCCEEE
Confidence            67889987554 55666666654  456666688888754 6677887622  2    23332    332  34599999


Q ss_pred             eCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchh---hh-ccCcEEE--eeccCCCcHHHHHHHHHcCCC
Q 017426          268 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP---AA-VREVDVV--GVFRYKNTWPLCLELLRSGKI  335 (372)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~---~~-~~~~~i~--~~~~~~~~~~~~~~ll~~g~~  335 (372)
                      .++....+.+.+...|. .|+.|.+.-.-....-....   +. .+++.+.  ....+...++.+-+++.+|.+
T Consensus        73 Iatp~~~H~e~~~~AL~-aGkhVl~EKPla~t~~ea~~l~~~a~~~~~~l~v~~~~Rf~p~~~~~k~li~~g~l  145 (342)
T COG0673          73 IATPNALHAELALAALE-AGKHVLCEKPLALTLEEAEELVELARKAGVKLMVGFNRRFDPAVQALKELIDSGAL  145 (342)
T ss_pred             EcCCChhhHHHHHHHHh-cCCEEEEcCCCCCCHHHHHHHHHHHHHcCCceeeehhhhcCHHHHHHHHHHhcCCc
Confidence            99998888888888888 56667775221111111111   11 1122222  122236678888888888877

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=93.65  E-value=0.39  Score=43.33  Aligned_cols=86  Identities=26%  Similarity=0.397  Sum_probs=52.9

Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCe----EEecCCCcccHH---HHHHHHH
Q 017426          186 NIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADN----IVKVSTNLQDIA---EEVEKIQ  256 (372)
Q Consensus       186 ~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~----v~~~~~~~~~~~---~~~~~~~  256 (372)
                      +.++-.+|+|.|+ .++|++.+.-++..|+. |..+.++.++...+ +.++...    +.-++.+-.++.   ..++++ 
T Consensus        29 ~~k~~~hi~itggS~glgl~la~e~~~~ga~-Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l-  106 (331)
T KOG1210|consen   29 KPKPRRHILITGGSSGLGLALALECKREGAD-VTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEEL-  106 (331)
T ss_pred             ccCccceEEEecCcchhhHHHHHHHHHccCc-eEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhh-
Confidence            3455578999976 99999999999999996 55665777766654 4455221    111111112222   122222 


Q ss_pred             HHcCCcceEEEeCCCcH
Q 017426          257 KAMGTGIDVSFDCAGLN  273 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~~  273 (372)
                      +...+.+|.+|.|.|..
T Consensus       107 ~~~~~~~d~l~~cAG~~  123 (331)
T KOG1210|consen  107 RDLEGPIDNLFCCAGVA  123 (331)
T ss_pred             hhccCCcceEEEecCcc
Confidence            12357899999999863

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=93.64  E-value=1.2  Score=38.17  Aligned_cols=99  Identities=15%  Similarity=0.118  Sum_probs=62.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d  264 (372)
                      ++.+||-.|+|. |..+..+++......+++++.+++..+.+++    .+...+....   .+..+.+....  ..+.+|
T Consensus        40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~---~d~~~~l~~~~--~~~~~D  113 (202)
T PRK00121         40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC---GDAVEVLLDMF--PDGSLD  113 (202)
T ss_pred             CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe---cCHHHHHHHHc--Cccccc
Confidence            567888888764 7777778777644479999999988877654    2333222111   22212222111  245689


Q ss_pred             EEEeCCC--------------cHHHHHHHHHHhccCCEEEEEc
Q 017426          265 VSFDCAG--------------LNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       265 ~vid~~g--------------~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      .|+-...              ....+..+.+.|+++|.++...
T Consensus       114 ~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~LkpgG~l~i~~  156 (202)
T PRK00121        114 RIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPGGEIHFAT  156 (202)
T ss_pred             eEEEECCCCCCCccccccccCCHHHHHHHHHHcCCCCEEEEEc
Confidence            8875322              1346788899999999998753

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=93.64  E-value=0.41  Score=41.84  Aligned_cols=70  Identities=21%  Similarity=0.304  Sum_probs=48.0

Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh--hHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          193 VLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD--YRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       193 vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~--~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      |+|.|+ |.+|..+++.+...+.+ |.+..+++  +....++..|+..+ ..+..   -.+.+.+..    .++|.||.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~-V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~---~~~~l~~al----~g~d~v~~~   71 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFS-VRALVRDPSSDRAQQLQALGAEVV-EADYD---DPESLVAAL----KGVDAVFSV   71 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGC-EEEEESSSHHHHHHHHHHTTTEEE-ES-TT----HHHHHHHH----TTCSEEEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCC-cEEEEeccchhhhhhhhcccceEe-ecccC---CHHHHHHHH----cCCceEEee
Confidence            789998 99999999999998886 55555554  34556677888644 33322   233444443    589999988


Q ss_pred             CC
Q 017426          270 AG  271 (372)
Q Consensus       270 ~g  271 (372)
                      .+
T Consensus        72 ~~   73 (233)
T PF05368_consen   72 TP   73 (233)
T ss_dssp             SS
T ss_pred             cC
Confidence            88

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=93.63  E-value=0.29  Score=45.74  Aligned_cols=78  Identities=18%  Similarity=0.112  Sum_probs=46.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCC--C-eEEecCCCcccHHHHHHHHHHHcCCcc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGA--D-NIVKVSTNLQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~--~-~v~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      .|.+|||+|+ |.+|..+++.+...|.+ |+++++++.... ..+.++.  . ..+..+-.  + .+.+.++.+  ..++
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~--~-~~~~~~~~~--~~~~   76 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAE-VYGYSLDPPTSPNLFELLNLAKKIEDHFGDIR--D-AAKLRKAIA--EFKP   76 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCE-EEEEeCCCccchhHHHHHhhcCCceEEEccCC--C-HHHHHHHHh--hcCC
Confidence            3678999987 99999999999999984 666666554322 2222221  1 11222221  1 122333332  2368


Q ss_pred             eEEEeCCCc
Q 017426          264 DVSFDCAGL  272 (372)
Q Consensus       264 d~vid~~g~  272 (372)
                      |+||.+.+.
T Consensus        77 d~vih~A~~   85 (349)
T TIGR02622        77 EIVFHLAAQ   85 (349)
T ss_pred             CEEEECCcc
Confidence            999998863

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=93.62  E-value=0.89  Score=35.72  Aligned_cols=92  Identities=21%  Similarity=0.250  Sum_probs=53.7

Q ss_pred             EEEECC-CHHHHHHHHHHHHcC--CCeEEEEecChh---HHHHHHHhCCCeEEecCCCcccHHHHHHHHHH---------
Q 017426          193 VLIMGA-GPIGLVTMLAARAFG--APRIVIVDVDDY---RLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK---------  257 (372)
Q Consensus       193 vlI~Ga-g~~G~~ai~l~~~~g--~~~vv~v~~~~~---~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~---------  257 (372)
                      |.|.|+ |.+|..+.+++++..  + .|++......   -.+.++++.+..+...+.   +..+.+++...         
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~---~~~~~l~~~~~~~~~~~~v~   76 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADE---EAYEELKKALPSKGPGIEVL   76 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSH---HHHHHHHHHHHHTTSSSEEE
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH---HHHHHHHHHhhhcCCCCEEE
Confidence            568898 999999999999986  6 3555544332   234557788888776442   22222222210         


Q ss_pred             --------H-cCCcceEEEeCCCcHHHHHHHHHHhccCCE
Q 017426          258 --------A-MGTGIDVSFDCAGLNKTMSTALGATCAGGK  288 (372)
Q Consensus       258 --------~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~  288 (372)
                              . ...++|+++.++.+-..+.-.+..+..+=+
T Consensus        77 ~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~  116 (129)
T PF02670_consen   77 SGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKD  116 (129)
T ss_dssp             ESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSE
T ss_pred             eChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCe
Confidence                    0 125788888877666666777777774433

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=93.62  E-value=0.88  Score=39.78  Aligned_cols=80  Identities=19%  Similarity=0.230  Sum_probs=46.5

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChh--HHHHHHHhC---C-CeEEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY--RLSVAKEIG---A-DNIVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~--~~~~~~~lg---~-~~v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      .++||+|+ |.+|..+++.+...|+ .|+.+.++++  ..+....+.   . ..++..|-.+ .+..+.+..... ..++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~~~~   80 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGY-RVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEE-EEGP   80 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHH-HcCC
Confidence            47899987 9999999998888898 5677766633  222223322   1 1122223222 223333333322 2457


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|++|.+.|.
T Consensus        81 id~vi~~ag~   90 (245)
T PRK12824         81 VDILVNNAGI   90 (245)
T ss_pred             CCEEEECCCC
Confidence            9999998864

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.61  E-value=0.79  Score=40.45  Aligned_cols=80  Identities=24%  Similarity=0.238  Sum_probs=46.3

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh-hH-HHHHHH---hCCC-eEEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD-YR-LSVAKE---IGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~-~~-~~~~~~---lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      .++||.|+ |.+|..++..+...|++ |+.+++++ +. .+....   .+.. .++..+-.+ .++.+.+..+.+. .++
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   80 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFD-LAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAA-WGR   80 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHh-cCC
Confidence            47899998 99999999999999995 56665543 22 222222   2321 222223222 2333333333322 357


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|++|.+.|.
T Consensus        81 id~vi~~ag~   90 (256)
T PRK12745         81 IDCLVNNAGV   90 (256)
T ss_pred             CCEEEECCcc
Confidence            9999998764

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=93.61  E-value=0.6  Score=41.31  Aligned_cols=39  Identities=21%  Similarity=0.128  Sum_probs=30.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS  228 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~  228 (372)
                      .+.+|||+|+ |.+|..+++.+...|. .|+++.+++++..
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~   55 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAK   55 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHH
Confidence            3578999998 9999999988888898 4666667766543

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=93.61  E-value=0.68  Score=39.71  Aligned_cols=101  Identities=23%  Similarity=0.293  Sum_probs=65.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHHHc-C
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAF--GAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAM-G  260 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~--g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~~~-~  260 (372)
                      ....+||-+|.+ +|..++.+|+.+  +. +++.++.++++.+.+++    .|...-+.+  ...+..+.+.++.... .
T Consensus        44 ~~~k~vLEIGt~-~GySal~la~~l~~~g-~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~--~~gda~~~l~~l~~~~~~  119 (205)
T PF01596_consen   44 TRPKRVLEIGTF-TGYSALWLAEALPEDG-KITTIEIDPERAEIARENFRKAGLDDRIEV--IEGDALEVLPELANDGEE  119 (205)
T ss_dssp             HT-SEEEEESTT-TSHHHHHHHHTSTTTS-EEEEEESSHHHHHHHHHHHHHTTGGGGEEE--EES-HHHHHHHHHHTTTT
T ss_pred             cCCceEEEeccc-cccHHHHHHHhhcccc-eEEEecCcHHHHHHHHHHHHhcCCCCcEEE--EEeccHhhHHHHHhccCC
Confidence            344699999853 478888888876  34 79999999998877754    454322221  1245555566654322 2


Q ss_pred             CcceEEE-eCCCc--HHHHHHHHHHhccCCEEEEE
Q 017426          261 TGIDVSF-DCAGL--NKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       261 ~~~d~vi-d~~g~--~~~~~~~~~~l~~~G~~v~~  292 (372)
                      +.||.|| |+.-.  ...+..+++.|+++|.++.=
T Consensus       120 ~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~D  154 (205)
T PF01596_consen  120 GQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIAD  154 (205)
T ss_dssp             TSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CceeEEEEcccccchhhHHHHHhhhccCCeEEEEc
Confidence            5799997 54322  24577788999999987764

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PRK07102 short chain dehydrogenase; Provisional

Probab=93.58  E-value=0.71  Score=40.46  Aligned_cols=37  Identities=32%  Similarity=0.388  Sum_probs=30.7

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS  228 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~  228 (372)
                      .+++|.|+ |.+|..+++.+...|+ .|+++++++++.+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~   39 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLE   39 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHH
Confidence            47899987 9999999999988998 5777778776654

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=93.57  E-value=0.16  Score=39.83  Aligned_cols=85  Identities=21%  Similarity=0.254  Sum_probs=50.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEE-ecChhHHHHHHH-hCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          191 TNVLIMGAGPIGLVTMLAARAFGAPRIVIV-DVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v-~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      -+|-|+|+|.+|..+...++..|. .|..+ .++.++.+.+.. ++...+.++.    +       +    -...|++|-
T Consensus        11 l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~----~-------~----~~~aDlv~i   74 (127)
T PF10727_consen   11 LKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLE----E-------I----LRDADLVFI   74 (127)
T ss_dssp             -EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TT----G-------G----GCC-SEEEE
T ss_pred             cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCcccccccccccccccccccc----c-------c----cccCCEEEE
Confidence            478899999999999999999998 46666 444445554443 4443332211    1       1    257999999


Q ss_pred             CCCcHHHHHHHHHHhccC-----CEEEEE
Q 017426          269 CAGLNKTMSTALGATCAG-----GKVCLV  292 (372)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~-----G~~v~~  292 (372)
                      ++... .+......|+..     |+++.-
T Consensus        75 avpDd-aI~~va~~La~~~~~~~g~iVvH  102 (127)
T PF10727_consen   75 AVPDD-AIAEVAEQLAQYGAWRPGQIVVH  102 (127)
T ss_dssp             -S-CC-HHHHHHHHHHCC--S-TT-EEEE
T ss_pred             EechH-HHHHHHHHHHHhccCCCCcEEEE
Confidence            99975 777777777644     555543

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=93.54  E-value=0.55  Score=43.17  Aligned_cols=89  Identities=12%  Similarity=0.152  Sum_probs=57.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .|.+|.|+|.|.+|+.+++.++.+|+ .|++.++..++..     +.....    ...+    +.++.    ...|+|+.
T Consensus       135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~----~~~~----l~e~l----~~aDvvv~  196 (312)
T PRK15469        135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFA----GREE----LSAFL----SQTRVLIN  196 (312)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeec----cccc----HHHHH----hcCCEEEE
Confidence            57899999999999999999999999 5777766543321     111111    0112    33332    46788888


Q ss_pred             CCCcHHHHH-----HHHHHhccCCEEEEEcCC
Q 017426          269 CAGLNKTMS-----TALGATCAGGKVCLVGMG  295 (372)
Q Consensus       269 ~~g~~~~~~-----~~~~~l~~~G~~v~~g~~  295 (372)
                      +........     ..+..|+++..++.++..
T Consensus       197 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG  228 (312)
T PRK15469        197 LLPNTPETVGIINQQLLEQLPDGAYLLNLARG  228 (312)
T ss_pred             CCCCCHHHHHHhHHHHHhcCCCCcEEEECCCc
Confidence            776543222     356678888777776643

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=93.52  E-value=0.26  Score=43.79  Aligned_cols=74  Identities=19%  Similarity=0.115  Sum_probs=50.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCC
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  271 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  271 (372)
                      +|||.|++.-|..++..+...|. .|+++.+++...+.+...|...++.- .  .+-. .++++..  ..++|+|+|++.
T Consensus         2 ~ILvlGGT~egr~la~~L~~~g~-~v~~s~~t~~~~~~~~~~g~~~v~~g-~--l~~~-~l~~~l~--~~~i~~VIDAtH   74 (256)
T TIGR00715         2 TVLLMGGTVDSRAIAKGLIAQGI-EILVTVTTSEGKHLYPIHQALTVHTG-A--LDPQ-ELREFLK--RHSIDILVDATH   74 (256)
T ss_pred             eEEEEechHHHHHHHHHHHhCCC-eEEEEEccCCccccccccCCceEEEC-C--CCHH-HHHHHHH--hcCCCEEEEcCC
Confidence            68999884459998888888897 57777788877777777766555421 1  2222 2444443  478999999887


Q ss_pred             c
Q 017426          272 L  272 (372)
Q Consensus       272 ~  272 (372)
                      .
T Consensus        75 P   75 (256)
T TIGR00715        75 P   75 (256)
T ss_pred             H
Confidence            4

This enzyme was found to be a monomer by gel filtration.

>PRK13243 glyoxylate reductase; Reviewed

Probab=93.44  E-value=0.67  Score=43.06  Aligned_cols=88  Identities=20%  Similarity=0.208  Sum_probs=56.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .|.+|.|+|.|.+|..+++.++.+|. .|++.+++.+.. ....++...        .++.    ++.    ...|+|+-
T Consensus       149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~~--------~~l~----ell----~~aDiV~l  210 (333)
T PRK13243        149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAEY--------RPLE----ELL----RESDFVSL  210 (333)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCEe--------cCHH----HHH----hhCCEEEE
Confidence            57899999999999999999999999 578887765432 223344321        1222    222    34678877


Q ss_pred             CCCcHHHH-----HHHHHHhccCCEEEEEcC
Q 017426          269 CAGLNKTM-----STALGATCAGGKVCLVGM  294 (372)
Q Consensus       269 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~  294 (372)
                      ++......     ...+..|+++..++.++.
T Consensus       211 ~lP~t~~T~~~i~~~~~~~mk~ga~lIN~aR  241 (333)
T PRK13243        211 HVPLTKETYHMINEERLKLMKPTAILVNTAR  241 (333)
T ss_pred             eCCCChHHhhccCHHHHhcCCCCeEEEECcC
Confidence            76543211     235666777766666553

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=93.43  E-value=1.2  Score=36.34  Aligned_cols=87  Identities=20%  Similarity=0.163  Sum_probs=53.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .+.+|.|+|-|.-|++..+-+|-.|.+++++.....+..+.+++-|...        .+..+..        ...|+|+-
T Consensus         3 ~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v--------~~~~eAv--------~~aDvV~~   66 (165)
T PF07991_consen    3 KGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEV--------MSVAEAV--------KKADVVML   66 (165)
T ss_dssp             CTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-EC--------CEHHHHH--------HC-SEEEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCee--------ccHHHHH--------hhCCEEEE
Confidence            4689999999999999999999999976666655555888889888643        1233332        35889988


Q ss_pred             CCCcHH---HH-HHHHHHhccCCEEEE
Q 017426          269 CAGLNK---TM-STALGATCAGGKVCL  291 (372)
Q Consensus       269 ~~g~~~---~~-~~~~~~l~~~G~~v~  291 (372)
                      .+....   .+ +.....|+++-.+++
T Consensus        67 L~PD~~q~~vy~~~I~p~l~~G~~L~f   93 (165)
T PF07991_consen   67 LLPDEVQPEVYEEEIAPNLKPGATLVF   93 (165)
T ss_dssp             -S-HHHHHHHHHHHHHHHS-TT-EEEE
T ss_pred             eCChHHHHHHHHHHHHhhCCCCCEEEe
Confidence            877531   22 334456776665554

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>PLN02476 O-methyltransferase

Probab=93.43  E-value=2  Score=38.69  Aligned_cols=105  Identities=21%  Similarity=0.228  Sum_probs=65.9

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHH----HhCCCeEEecCCCcccHHHHHHHHHHHc
Q 017426          185 ANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       185 ~~~~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      .+.....+||-+|.+ +|..++.+++.++ -..++.++.+++..+.++    +.|...-+..  ...+..+.+.++....
T Consensus       114 ~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~l--i~GdA~e~L~~l~~~~  190 (278)
T PLN02476        114 VQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNV--KHGLAAESLKSMIQNG  190 (278)
T ss_pred             HHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEE--EEcCHHHHHHHHHhcc
Confidence            445567899999852 4666677777653 125899999998877664    4565432222  1244455555543211


Q ss_pred             -CCcceEEEeCCCc---HHHHHHHHHHhccCCEEEEE
Q 017426          260 -GTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       260 -~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~  292 (372)
                       .+.||.||--...   ...++.+++.|+++|.++.=
T Consensus       191 ~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~D  227 (278)
T PLN02476        191 EGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMD  227 (278)
T ss_pred             cCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence             2579999844333   24677889999999987753

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=93.43  E-value=0.62  Score=46.68  Aligned_cols=75  Identities=15%  Similarity=0.144  Sum_probs=55.5

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCC
Q 017426          191 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  270 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  270 (372)
                      ++++|.|.|.+|+.+++.++..|. .+++++.++++.+.+++.|...+.- |..+   .+.+++.   +-..+|.++-++
T Consensus       418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~G-D~~~---~~~L~~a---~i~~a~~viv~~  489 (558)
T PRK10669        418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLG-NAAN---EEIMQLA---HLDCARWLLLTI  489 (558)
T ss_pred             CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEc-CCCC---HHHHHhc---CccccCEEEEEc
Confidence            689999999999999999999998 4899999999999999888655432 2222   2233332   235789888776


Q ss_pred             CcH
Q 017426          271 GLN  273 (372)
Q Consensus       271 g~~  273 (372)
                      ++.
T Consensus       490 ~~~  492 (558)
T PRK10669        490 PNG  492 (558)
T ss_pred             CCh
Confidence            654

>PRK08291 ectoine utilization protein EutC; Validated

Probab=93.40  E-value=1.6  Score=40.58  Aligned_cols=93  Identities=15%  Similarity=0.202  Sum_probs=58.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEecChhHHHHH-HHh----CCCeEEecCCCcccHHHHHHHHHHHcCC
Q 017426          188 GPETNVLIMGAGPIGLVTMLAAR-AFGAPRIVIVDVDDYRLSVA-KEI----GADNIVKVSTNLQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~-~~g~~~vv~v~~~~~~~~~~-~~l----g~~~v~~~~~~~~~~~~~~~~~~~~~~~  261 (372)
                      +...+++|+|+|..|.+.+..+. ..+++.+.+..+++++.+.+ +++    |.. +..+    .++.+.+        .
T Consensus       130 ~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~----~d~~~al--------~  196 (330)
T PRK08291        130 EDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVA----RDVHEAV--------A  196 (330)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEe----CCHHHHH--------c
Confidence            44568999999999988776666 46788889999998876644 433    332 2212    2222222        4


Q ss_pred             cceEEEeCCCcHHHHHHHHHHhccCCEEEEEcC
Q 017426          262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       262 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      ..|+|+.++.....+- -...++++-++..+|.
T Consensus       197 ~aDiVi~aT~s~~p~i-~~~~l~~g~~v~~vg~  228 (330)
T PRK08291        197 GADIIVTTTPSEEPIL-KAEWLHPGLHVTAMGS  228 (330)
T ss_pred             cCCEEEEeeCCCCcEe-cHHHcCCCceEEeeCC
Confidence            6899999887653221 1234676666666664

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=93.35  E-value=0.81  Score=37.41  Aligned_cols=91  Identities=13%  Similarity=0.203  Sum_probs=56.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCC------eEEecC-CCcccHHHHHHHHHHHcCCcce
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD------NIVKVS-TNLQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~------~v~~~~-~~~~~~~~~~~~~~~~~~~~~d  264 (372)
                      +|.|+|+|..|.+++.++...|. .|....++++..+.+++-+..      ..+... ....|+.+.+        .+.|
T Consensus         1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~--------~~ad   71 (157)
T PF01210_consen    1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEAL--------EDAD   71 (157)
T ss_dssp             EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHH--------TT-S
T ss_pred             CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHh--------Cccc
Confidence            58899999999999999999997 688888888877776653321      000000 0113333333        5789


Q ss_pred             EEEeCCCcHHHHHHHHHHhcc---CCEEEEE
Q 017426          265 VSFDCAGLNKTMSTALGATCA---GGKVCLV  292 (372)
Q Consensus       265 ~vid~~g~~~~~~~~~~~l~~---~G~~v~~  292 (372)
                      +++-++.+. .++..++.+++   .+..+..
T Consensus        72 ~IiiavPs~-~~~~~~~~l~~~l~~~~~ii~  101 (157)
T PF01210_consen   72 IIIIAVPSQ-AHREVLEQLAPYLKKGQIIIS  101 (157)
T ss_dssp             EEEE-S-GG-GHHHHHHHHTTTSHTT-EEEE
T ss_pred             EEEecccHH-HHHHHHHHHhhccCCCCEEEE
Confidence            999999875 55666666665   3555544

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=93.35  E-value=0.73  Score=33.34  Aligned_cols=84  Identities=15%  Similarity=0.251  Sum_probs=53.4

Q ss_pred             ECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCe---EEecCCCcccHHHHHHHHHHHcCCcceEEEeCCC-
Q 017426          196 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN---IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG-  271 (372)
Q Consensus       196 ~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~---v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g-  271 (372)
                      .|+| .|..+..+++. +...+++++.+++..+.+++.....   +...+.....+          ..+-+|+|+.... 
T Consensus         3 iG~G-~G~~~~~l~~~-~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~----------~~~sfD~v~~~~~~   70 (95)
T PF08241_consen    3 IGCG-TGRFAAALAKR-GGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAEDLPF----------PDNSFDVVFSNSVL   70 (95)
T ss_dssp             ET-T-TSHHHHHHHHT-TTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTTSSSS-----------TT-EEEEEEESHG
T ss_pred             ecCc-CCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHhcccccCchheeehHHhCcc----------ccccccccccccce
Confidence            4555 58888888888 4458999999999888887755332   22222211111          1467999986321 


Q ss_pred             -----cHHHHHHHHHHhccCCEEEE
Q 017426          272 -----LNKTMSTALGATCAGGKVCL  291 (372)
Q Consensus       272 -----~~~~~~~~~~~l~~~G~~v~  291 (372)
                           -...+..+.+.|+++|.++.
T Consensus        71 ~~~~~~~~~l~e~~rvLk~gG~l~~   95 (95)
T PF08241_consen   71 HHLEDPEAALREIYRVLKPGGRLVI   95 (95)
T ss_dssp             GGSSHHHHHHHHHHHHEEEEEEEEE
T ss_pred             eeccCHHHHHHHHHHHcCcCeEEeC
Confidence                 12467789999999999864

The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=93.34  E-value=0.41  Score=43.32  Aligned_cols=43  Identities=23%  Similarity=0.376  Sum_probs=36.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHH
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA  230 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~  230 (372)
                      ..+.++||+|+|+.+.+++.-+...|++.+.++.++.+|.+.+
T Consensus       125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~L  167 (283)
T PRK14027        125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQAL  167 (283)
T ss_pred             cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHH
Confidence            3478999999999999999888889998899999988876654

>PRK05599 hypothetical protein; Provisional

Probab=93.28  E-value=0.75  Score=40.55  Aligned_cols=78  Identities=17%  Similarity=0.222  Sum_probs=46.5

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HH---hCCC--eEEecCCCc-ccHHHHHHHHHHHcCCcc
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD--NIVKVSTNL-QDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~---lg~~--~v~~~~~~~-~~~~~~~~~~~~~~~~~~  263 (372)
                      ++||+|+ +++|.++++.+. .|. .|+.+.+++++.+.+ ++   .+..  ..+..|-.+ ++..+.+.++.+ ..+++
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g~i   78 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGE-DVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQE-LAGEI   78 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHH-hcCCC
Confidence            5889987 999999887766 487 577777777665533 22   3322  233333222 223333333332 23689


Q ss_pred             eEEEeCCCc
Q 017426          264 DVSFDCAGL  272 (372)
Q Consensus       264 d~vid~~g~  272 (372)
                      |+++.+.|.
T Consensus        79 d~lv~nag~   87 (246)
T PRK05599         79 SLAVVAFGI   87 (246)
T ss_pred             CEEEEecCc
Confidence            999987764

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=93.27  E-value=1.3  Score=47.28  Aligned_cols=137  Identities=13%  Similarity=0.126  Sum_probs=74.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHc-CCC------------eEEEEecChhHHHHH-HHh-CCCeEEecCCCcccHHHHHH
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAF-GAP------------RIVIVDVDDYRLSVA-KEI-GADNIVKVSTNLQDIAEEVE  253 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~-g~~------------~vv~v~~~~~~~~~~-~~l-g~~~v~~~~~~~~~~~~~~~  253 (372)
                      ...+|+|+|+|.+|...++.+... +++            .|.+++.+.++.+.+ +.+ ++..+. .+-  .+. +.+.
T Consensus       568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~-lDv--~D~-e~L~  643 (1042)
T PLN02819        568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQ-LDV--SDS-ESLL  643 (1042)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEE-eec--CCH-HHHH
Confidence            466899999999999999888654 332            366677776665544 444 433222 211  122 2233


Q ss_pred             HHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccCCCcHHH--HHHHHH
Q 017426          254 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPL--CLELLR  331 (372)
Q Consensus       254 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~ll~  331 (372)
                      ++.    .++|+|+.+++..-+...+..++..+=.++..........-.....-..++.+........-+..  +.+++.
T Consensus       644 ~~v----~~~DaVIsalP~~~H~~VAkaAieaGkHvv~eky~~~e~~~L~e~Ak~AGV~~m~e~GlDPGid~~lA~~~Id  719 (1042)
T PLN02819        644 KYV----SQVDVVISLLPASCHAVVAKACIELKKHLVTASYVSEEMSALDSKAKEAGITILCEMGLDPGIDHMMAMKMID  719 (1042)
T ss_pred             Hhh----cCCCEEEECCCchhhHHHHHHHHHcCCCEEECcCCHHHHHHHHHHHHHcCCEEEECCccCHHHHHHHHHHHHH
Confidence            322    35999999999865655666666655444443211111111111122344555544444444444  555565


Q ss_pred             cC
Q 017426          332 SG  333 (372)
Q Consensus       332 ~g  333 (372)
                      ++
T Consensus       720 ~~  721 (1042)
T PLN02819        720 DA  721 (1042)
T ss_pred             hh
Confidence            54

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=93.23  E-value=2  Score=36.99  Aligned_cols=107  Identities=14%  Similarity=0.053  Sum_probs=64.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh-hHHH-HHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD-YRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~-~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .|.+|||.|+|.+|.-=+.++...|+. ++++..+. .... +....+...+    .  ..+...   .    ..++++|
T Consensus        11 ~~k~VlvvGgG~va~rKa~~ll~~ga~-v~Vvs~~~~~el~~~~~~~~i~~~----~--~~~~~~---~----~~~~~lv   76 (210)
T COG1648          11 EGKKVLVVGGGSVALRKARLLLKAGAD-VTVVSPEFEPELKALIEEGKIKWI----E--REFDAE---D----LDDAFLV   76 (210)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhcCCE-EEEEcCCccHHHHHHHHhcCcchh----h--cccChh---h----hcCceEE
Confidence            467999999999999999999999995 55553333 2222 2222222111    1  111111   1    1349999


Q ss_pred             EeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhcc
Q 017426          267 FDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVR  309 (372)
Q Consensus       267 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~  309 (372)
                      |-+++.+..-+.........+.++.....+...++.......+
T Consensus        77 iaAt~d~~ln~~i~~~a~~~~i~vNv~D~p~~~~f~~Pa~~~r  119 (210)
T COG1648          77 IAATDDEELNERIAKAARERRILVNVVDDPELCDFIFPAIVDR  119 (210)
T ss_pred             EEeCCCHHHHHHHHHHHHHhCCceeccCCcccCceecceeecc
Confidence            9999987555566667777788777655544444444444433

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=93.21  E-value=0.69  Score=46.90  Aligned_cols=77  Identities=16%  Similarity=0.226  Sum_probs=57.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      .++|+|.|.|.+|+.+++.++..|. .+++++.++++.+.+++.|...+. -|..+.+   .+++.   +-..+|.++-+
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDat~~~---~L~~a---gi~~A~~vvv~  471 (621)
T PRK03562        400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GDATRMD---LLESA---GAAKAEVLINA  471 (621)
T ss_pred             cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-EeCCCHH---HHHhc---CCCcCCEEEEE
Confidence            3579999999999999999999998 488999999999999998865432 2222222   23222   34579999998


Q ss_pred             CCcHH
Q 017426          270 AGLNK  274 (372)
Q Consensus       270 ~g~~~  274 (372)
                      +++++
T Consensus       472 ~~d~~  476 (621)
T PRK03562        472 IDDPQ  476 (621)
T ss_pred             eCCHH
Confidence            88753

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.21  E-value=1  Score=40.71  Aligned_cols=83  Identities=17%  Similarity=0.208  Sum_probs=56.6

Q ss_pred             HHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHH
Q 017426          181 ACRRANI-GPETNVLIMGAGP-IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       181 ~l~~~~~-~~g~~vlI~Gag~-~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      .++..++ -.|.+++|.|.|. +|.-++.++...|+. |.++.+..                     .+    +.+..  
T Consensus       148 ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gat-Vtv~~s~t---------------------~~----l~~~~--  199 (286)
T PRK14175        148 ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNAS-VTILHSRS---------------------KD----MASYL--  199 (286)
T ss_pred             HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCe-EEEEeCCc---------------------hh----HHHHH--
Confidence            3454432 3689999999855 999999999999995 55554321                     11    22222  


Q ss_pred             cCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCC
Q 017426          259 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG  295 (372)
Q Consensus       259 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  295 (372)
                        ..+|+||.++|.+..+..  +.++++-.++.+|..
T Consensus       200 --~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~  232 (286)
T PRK14175        200 --KDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNT  232 (286)
T ss_pred             --hhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCC
Confidence              478999999998754443  467888777788754

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=93.20  E-value=0.49  Score=43.31  Aligned_cols=45  Identities=18%  Similarity=0.096  Sum_probs=36.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhH---HHHHHHhC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR---LSVAKEIG  234 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~---~~~~~~lg  234 (372)
                      .+.+|+|+|| |-+|..++..+...|+. |.++.++++.   .+.++++.
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~-V~gtVR~~~~~k~~~~L~~l~   53 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYT-VRGTVRDPEDEKKTEHLRKLE   53 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCE-EEEEEcCcchhhhHHHHHhcc
Confidence            5678999998 99999999999999995 7777777765   34577765

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.19  E-value=0.39  Score=43.39  Aligned_cols=84  Identities=13%  Similarity=0.140  Sum_probs=57.2

Q ss_pred             HHHhcC-CCCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHH
Q 017426          181 ACRRAN-IGPETNVLIMGAGP-IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       181 ~l~~~~-~~~g~~vlI~Gag~-~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      .++..+ --.|.+++|.|+|. +|..++.++...|+ .|.++.+..                     .+    +.+..  
T Consensus       149 ~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t---------------------~~----L~~~~--  200 (283)
T PRK14192        149 LLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRT---------------------QN----LPELV--  200 (283)
T ss_pred             HHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCc---------------------hh----HHHHh--
Confidence            344433 34788999999976 99999999999999 566654311                     11    11111  


Q ss_pred             cCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCC
Q 017426          259 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH  296 (372)
Q Consensus       259 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  296 (372)
                        ..+|++|+++|.+..  .-.+.++++-.++.++...
T Consensus       201 --~~aDIvI~AtG~~~~--v~~~~lk~gavViDvg~n~  234 (283)
T PRK14192        201 --KQADIIVGAVGKPEL--IKKDWIKQGAVVVDAGFHP  234 (283)
T ss_pred             --ccCCEEEEccCCCCc--CCHHHcCCCCEEEEEEEee
Confidence              478999999987643  2235688888888887543

>PRK07201 short chain dehydrogenase; Provisional

Probab=93.16  E-value=0.83  Score=46.68  Aligned_cols=81  Identities=25%  Similarity=0.300  Sum_probs=51.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCC-eEEecCC-CcccHHHHHHHHHHHcCCc
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVST-NLQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~v~~~~~-~~~~~~~~~~~~~~~~~~~  262 (372)
                      +.++||+|+ |.+|..++..+...|+ .|+++++++++.+.+ +++   +.. .++..|- +.+++.+.+.++.+. .++
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~g~  448 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGA-TVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAE-HGH  448 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh-cCC
Confidence            568999988 9999999998888898 577777877665433 222   322 1222222 223333444443332 357


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|++|.+.|.
T Consensus       449 id~li~~Ag~  458 (657)
T PRK07201        449 VDYLVNNAGR  458 (657)
T ss_pred             CCEEEECCCC
Confidence            9999998873

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=93.13  E-value=1.3  Score=39.83  Aligned_cols=87  Identities=20%  Similarity=0.161  Sum_probs=55.5

Q ss_pred             CEEEEECCCHHHHHHHHHHHH--cCCCeEEEEecChhHHH-HHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          191 TNVLIMGAGPIGLVTMLAARA--FGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~--~g~~~vv~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      -+|-|+|+|.+|...++.+..  .+.+.+.+.++++++.+ +++.+|.....      .++    .++.    ...|+|+
T Consensus         7 irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~------~~~----eell----~~~D~Vv   72 (271)
T PRK13302          7 LRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPV------VPL----DQLA----THADIVV   72 (271)
T ss_pred             eEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCccc------CCH----HHHh----cCCCEEE
Confidence            578899999999988776665  36654456677766654 44566643221      122    2222    2479999


Q ss_pred             eCCCcHHHHHHHHHHhccCCEEEE
Q 017426          268 DCAGLNKTMSTALGATCAGGKVCL  291 (372)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~G~~v~  291 (372)
                      .|++...+.+.....|..+-.++.
T Consensus        73 i~tp~~~h~e~~~~aL~aGk~Vi~   96 (271)
T PRK13302         73 EAAPASVLRAIVEPVLAAGKKAIV   96 (271)
T ss_pred             ECCCcHHHHHHHHHHHHcCCcEEE
Confidence            999887666666777776554544

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=93.07  E-value=0.87  Score=39.59  Aligned_cols=34  Identities=29%  Similarity=0.514  Sum_probs=29.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      ..+|+|.|.|++|.+++..+-+.|..++..++.+
T Consensus        30 ~~~V~VvGiGGVGSw~veALaRsGig~itlID~D   63 (263)
T COG1179          30 QAHVCVVGIGGVGSWAVEALARSGIGRITLIDMD   63 (263)
T ss_pred             hCcEEEEecCchhHHHHHHHHHcCCCeEEEEecc
Confidence            4789999999999999999999999877777544

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=93.06  E-value=1.4  Score=35.77  Aligned_cols=94  Identities=21%  Similarity=0.296  Sum_probs=58.7

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHH-----HcCCcce
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK-----AMGTGID  264 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~d  264 (372)
                      .+|+|+|+ |++|.+.++..+..++ -|..++-++...       ++.-|..+ .+.+|.++-....+     ..+.++|
T Consensus         4 grVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~-------Ad~sI~V~-~~~swtEQe~~v~~~vg~sL~gekvD   74 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQ-------ADSSILVD-GNKSWTEQEQSVLEQVGSSLQGEKVD   74 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeeccccc-------ccceEEec-CCcchhHHHHHHHHHHHHhhcccccc
Confidence            47899988 9999999999999988 466665544322       22222222 23455544333322     1367899


Q ss_pred             EEEeCCCcHH--------------------------HHHHHHHHhccCCEEEEEc
Q 017426          265 VSFDCAGLNK--------------------------TMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       265 ~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g  293 (372)
                      .||...|+-+                          ....+..+|+++|-+...|
T Consensus        75 av~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtG  129 (236)
T KOG4022|consen   75 AVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTG  129 (236)
T ss_pred             eEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecc
Confidence            9998776531                          1122445788888877765

>PLN03013 cysteine synthase

Probab=93.06  E-value=1.4  Score=42.12  Aligned_cols=57  Identities=23%  Similarity=0.334  Sum_probs=43.6

Q ss_pred             HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEE--ecChhHHHHHHHhCCCeEE
Q 017426          183 RRANIGPETNVLIMG-AGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKEIGADNIV  239 (372)
Q Consensus       183 ~~~~~~~g~~vlI~G-ag~~G~~ai~l~~~~g~~~vv~v--~~~~~~~~~~~~lg~~~v~  239 (372)
                      +...+++|.+.+|.. +|..|++++..|+.+|++.++++  ..++++.+.++.+|++-+.
T Consensus       167 ~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~  226 (429)
T PLN03013        167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVL  226 (429)
T ss_pred             HcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEE
Confidence            346678886766664 59999999999999999766665  3455788888999976543

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=93.05  E-value=0.93  Score=41.20  Aligned_cols=43  Identities=16%  Similarity=0.186  Sum_probs=36.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA  235 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~  235 (372)
                      +|.|+|.|.+|..++..+...|. .|++.++++++.+.+.+.|.
T Consensus         1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~   43 (291)
T TIGR01505         1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGA   43 (291)
T ss_pred             CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence            47788999999998888888898 57888999988888777665

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.02  E-value=1  Score=39.80  Aligned_cols=34  Identities=24%  Similarity=0.187  Sum_probs=26.4

Q ss_pred             CCCEEEEECCC---HHHHHHHHHHHHcCCCeEEEEecC
Q 017426          189 PETNVLIMGAG---PIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       189 ~g~~vlI~Gag---~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      .+.++||+|++   ++|..++..+...|++ |+++.++
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~-vi~~~r~   40 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGID-IFFTYWS   40 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCc-EEEEcCC
Confidence            35789999873   7999988888888985 6666554

>PRK11761 cysM cysteine synthase B; Provisional

Probab=93.02  E-value=4.1  Score=37.19  Aligned_cols=57  Identities=21%  Similarity=0.345  Sum_probs=44.1

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEe--cChhHHHHHHHhCCCeEE
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD--VDDYRLSVAKEIGADNIV  239 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~--~~~~~~~~~~~lg~~~v~  239 (372)
                      +...+.+|++|+....|..|++++..|+.+|.+.++++.  .++.+.+.++.+|+.-+.
T Consensus        56 ~~g~~~~g~~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~  114 (296)
T PRK11761         56 KRGEIKPGDTLIEATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELIL  114 (296)
T ss_pred             HcCCCCCCCEEEEeCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEE
Confidence            445567787776666799999999999999998777774  345788888999987654

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=93.01  E-value=0.82  Score=39.68  Aligned_cols=104  Identities=17%  Similarity=0.175  Sum_probs=58.9

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCeEE-------ecCCCccc-HHHHHHHHH
Q 017426          186 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIV-------KVSTNLQD-IAEEVEKIQ  256 (372)
Q Consensus       186 ~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~v~-------~~~~~~~~-~~~~~~~~~  256 (372)
                      ...++.+||+.|+|. |.-++-||. .|. .|++++.++...+.+ ++.+.....       .+....-+ +...+.++.
T Consensus        34 ~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~  110 (218)
T PRK13255         34 ALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALT  110 (218)
T ss_pred             CCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCC
Confidence            446778999998764 677777764 698 599999999877754 333322100       00000000 000010110


Q ss_pred             HHcCCcceEEEeCCCc--------HHHHHHHHHHhccCCEEEEE
Q 017426          257 KAMGTGIDVSFDCAGL--------NKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~  292 (372)
                      ......+|.|+|..--        ...+..+.+.|+|+|++..+
T Consensus       111 ~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~  154 (218)
T PRK13255        111 AADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV  154 (218)
T ss_pred             cccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence            0012478999985421        13467788899999875554

>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=93.00  E-value=1.5  Score=40.88  Aligned_cols=99  Identities=19%  Similarity=0.063  Sum_probs=54.8

Q ss_pred             EEEEECCCHHHHHHHHHHHH-cCCCeEEEEecChhHHHH-HHHhCCCeEEe-------cCCCcccHHHHHHHHHHHcCCc
Q 017426          192 NVLIMGAGPIGLVTMLAARA-FGAPRIVIVDVDDYRLSV-AKEIGADNIVK-------VSTNLQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~-~g~~~vv~v~~~~~~~~~-~~~lg~~~v~~-------~~~~~~~~~~~~~~~~~~~~~~  262 (372)
                      +|.|+|+|.+|+..++.+.. -+++.+.+.++++++... ++..|.+....       +....-.......++.    .+
T Consensus         3 kVaI~G~GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~----~~   78 (341)
T PRK04207          3 KVGVNGYGTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLL----EK   78 (341)
T ss_pred             EEEEECCCHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhh----cc
Confidence            68899999999998888765 467555555555544443 34344321000       0000000001122221    46


Q ss_pred             ceEEEeCCCcHHHHHHHHHHhccCCEEEEEcC
Q 017426          263 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       263 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      +|+||||++...+...+-.+++.+-.++..+.
T Consensus        79 vDVVIdaT~~~~~~e~a~~~~~aGk~VI~~~~  110 (341)
T PRK04207         79 ADIVVDATPGGVGAKNKELYEKAGVKAIFQGG  110 (341)
T ss_pred             CCEEEECCCchhhHHHHHHHHHCCCEEEEcCC
Confidence            99999999987666666666665544444443

>PRK06153 hypothetical protein; Provisional

Probab=92.99  E-value=1.1  Score=41.99  Aligned_cols=34  Identities=21%  Similarity=0.237  Sum_probs=29.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      +.+|+|.|+|++|..+++.+-+.|...++.++.+
T Consensus       176 ~~~VaIVG~GG~GS~Va~~LAR~GVgeI~LVD~D  209 (393)
T PRK06153        176 GQRIAIIGLGGTGSYILDLVAKTPVREIHLFDGD  209 (393)
T ss_pred             hCcEEEEcCCccHHHHHHHHHHcCCCEEEEECCC
Confidence            5799999999999999999999999888887543

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=92.98  E-value=0.59  Score=40.25  Aligned_cols=81  Identities=27%  Similarity=0.343  Sum_probs=52.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC----CCeE--EecC-CCcccHHHHHHHHHHHcCC
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG----ADNI--VKVS-TNLQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg----~~~v--~~~~-~~~~~~~~~~~~~~~~~~~  261 (372)
                      |.++++.|+ |++|+....-+...|+.+.++. -+.|+.+...+|.    ...+  +.++ .+..+..+.+++...+ -+
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~-~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~-fg   82 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKGIKVLVID-DSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT-FG   82 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcCchheeeh-hhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH-hC
Confidence            789999865 9999999888889999654444 4445454444443    2222  2232 2345666667666554 36


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      .+|+.|+-.|-
T Consensus        83 ~iDIlINgAGi   93 (261)
T KOG4169|consen   83 TIDILINGAGI   93 (261)
T ss_pred             ceEEEEccccc
Confidence            89999997664

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=92.97  E-value=1.3  Score=40.78  Aligned_cols=105  Identities=18%  Similarity=0.178  Sum_probs=62.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhC----CCeE--EecCCCcccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIG----ADNI--VKVSTNLQDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg----~~~v--~~~~~~~~~~~~~~~~~~~~~~  260 (372)
                      .|.+++|+|+ +++|..++.-+...|+ .|+.+.++.++.+ ..+++.    ...+  +..|-.+..-...+.+..+...
T Consensus        34 ~~~~~vVTGansGIG~eta~~La~~Ga-~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~  112 (314)
T KOG1208|consen   34 SGKVALVTGATSGIGFETARELALRGA-HVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE  112 (314)
T ss_pred             CCcEEEEECCCCchHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence            4567888998 9999999999999998 5666767775544 333433    2222  2222222221112222222346


Q ss_pred             CcceEEEeCCCcH-----------------------HHHHHHHHHhccC--CEEEEEcC
Q 017426          261 TGIDVSFDCAGLN-----------------------KTMSTALGATCAG--GKVCLVGM  294 (372)
Q Consensus       261 ~~~d~vid~~g~~-----------------------~~~~~~~~~l~~~--G~~v~~g~  294 (372)
                      .+.|+.|+..|--                       ...+.+++.|+..  +|+|.++.
T Consensus       113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS  171 (314)
T KOG1208|consen  113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSS  171 (314)
T ss_pred             CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcC
Confidence            7899999876642                       1234466666544  79888864

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=92.96  E-value=1.3  Score=40.43  Aligned_cols=43  Identities=21%  Similarity=0.218  Sum_probs=35.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA  235 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~  235 (372)
                      +|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|.
T Consensus         4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~   46 (296)
T PRK11559          4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGA   46 (296)
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence            68899999999988888888888 57788888888777766664

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	372
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		2e-88
1e3j_A	352	Ketose Reductase (Sorbitol Dehydrogenase) From Silv		4e-88
1pl7_A	356	Human Sorbitol Dehydrogenase (Apo) Length = 356		1e-87
1pl6_A	356	Human SdhNADHINHIBITOR COMPLEX Length = 356		3e-85
3m6i_A	363	L-Arabinitol 4-Dehydrogenase Length = 363		6e-59
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		3e-40
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		3e-40
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		4e-39
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		1e-37
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		4e-37
4a2c_A	346	Crystal Structure Of Galactitol-1-Phosphate Dehydro		2e-30
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		1e-27
4ilk_A	359	Crystal Structure Of Short Chain Alcohol Dehydrogen		1e-27
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		1e-27
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		6e-24
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		3e-23
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		9e-23
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		9e-23
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		2e-22
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		2e-22
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		3e-22
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		3e-22
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		5e-22
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		9e-22
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		1e-21
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		1e-21
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		1e-21
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		2e-21
2nvb_A	352	Contribution Of Pro275 To The Thermostability Of Th		2e-21
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		2e-21
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		2e-21
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		3e-21
1ykf_A	352	Nadp-Dependent Alcohol Dehydrogenase From Thermoana		3e-21
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		3e-21
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		3e-21
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		3e-21
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		3e-21
3fpl_A	351	Chimera Of Alcohol Dehydrogenase By Exchange Of The		4e-21
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		4e-21
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		4e-21
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		4e-21
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		4e-21
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		5e-21
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		6e-21
3fpc_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		1e-20
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		3e-20
1y9a_A	360	Alcohol Dehydrogenase From Entamoeba Histolotica In		7e-20
2oui_A	360	D275p Mutant Of Alcohol Dehydrogenase From Protozoa		1e-19
3fsr_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		2e-19
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		2e-19
1ped_A	351	Bacterial Secondary Alcohol Dehydrogenase (Apo-Form		3e-19
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		3e-19
2b83_A	351	A Single Amino Acid Substitution In The Clostridium		3e-19
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		3e-19
3ftn_A	352	Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDRO		3e-19
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		5e-19
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		9e-19
1jqb_A	351	Alcohol Dehydrogenase From Clostridium Beijerinckii		1e-18
1h2b_A	359	Crystal Structure Of The Alcohol Dehydrogenase From		1e-18
3ip1_A	404	Structure Of Putative Alcohol Dehydrogenase (Tm_042		2e-18
1jvb_A	347	Alcohol Dehydrogenase From The Archaeon Sulfolobus		9e-18
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		1e-17
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		2e-16
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		2e-16
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		2e-16
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		3e-16
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		7e-16
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		2e-15
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		2e-15
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		4e-15
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		4e-15
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		5e-15
1yqd_A	366	Sinapyl Alcohol Dehydrogenase Complexed With Nadp+		3e-14
2dph_A	398	Crystal Structure Of Formaldehyde Dismutase Length		3e-12
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		4e-12
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		1e-10
1kol_A	398	Crystal Structure Of Formaldehyde Dehydrogenase Len		3e-10
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		2e-09
3two_A	348	The Crystal Structure Of Cad From Helicobacter Pylo		3e-09
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		2e-08
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		3e-08
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		5e-08
1ps0_A	360	Crystal Structure Of The Nadp(H)-Dependent Cinnamyl		2e-07
1uuf_A	369	Crystal Structure Of A Zinc-Type Alcohol Dehydrogen		5e-07
3fbg_A	346	Crystal Structure Of A Putative Arginate Lyase From		1e-06
3goh_A	315	Crystal Structure Of Alcohol Dehydrogenase Superfam		8e-06
2b5w_A	357	Crystal Structure Of D38c Glucose Dehydrogenase Mut		9e-06
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		2e-05
3krt_A	456	Crystal Structure Of Putative Crotonyl Coa Reductas		7e-05
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		9e-05
2b5v_A	357	Crystal Structure Of Glucose Dehydrogenase From Hal		2e-04
2cd9_A	366	Sulfolobus Solfataricus Glucose Dehydrogenase 1 - A		4e-04
2cdb_A	366	Sulfolobus Solfataricus Glucose Dehydrogenase 1 In		4e-04

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score =  322 bits (825), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 170/354 (48%), Positives = 239/354 (67%), Gaps = 15/354 (4%)
Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct: 7   NLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVL 66
Query: 78  GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
           GHE +G + KVGS V+ L PGDRV        A++PG      + CK GRYNL P + F 
Sbjct: 67  GHEASGTVVKVGSLVRHLQPGDRV--------AIQPGAPRQTDEFCKIGRYNLSPTIFFC 118
Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
           ATPP  G+L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ G
Sbjct: 119 ATPPDDGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCG 178
Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQ 256
           AGPIGLV +LAA+A GA ++V+ D+   RLS AKE+GAD I+++S  + ++IA++VE + 
Sbjct: 179 AGPIGLVNLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKVEGL- 237
Query: 257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 316
             +G+  +V+ +C G+  ++   + AT +GG + LVG+G    +VPL  AA REVD+ GV
Sbjct: 238 --LGSKPEVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGV 295
Query: 317 FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 370
           FRY NTWP+ + +L S  ++VKPLVTHRF    ++  EAFETS + G  +KVM 
Sbjct: 296 FRYCNTWPMAISMLASKSVNVKPLVTHRFPL--EKALEAFETSKK-GLGLKVMI 346

>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352

Iteration: 1
 Score =  321 bits (823), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 173/355 (48%), Positives = 230/355 (64%), Gaps = 12/355 (3%)
Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++A L   N L+++   +P     +VL++M  VGICGSDVHY +  R ADF+VK+PMVI
Sbjct: 5   NLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 64
Query: 78  GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
           GHE +G + KVG  VK L  GDRV        A+EPG+ C RC  CK G+YNLCP++ F 
Sbjct: 65  GHEASGTVVKVGKNVKHLKKGDRV--------AVEPGVPCRRCQFCKEGKYNLCPDLTFC 116
Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
           ATPP  G+LA   VH AD C KLPDNVSLEEGA+ EPLSVGVHACRRA +   T VL++G
Sbjct: 117 ATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIG 176
Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 257
           AGPIGLV++LAA+A+GA  +V       RL VAK  GAD  + V    ++ +  +E+I+ 
Sbjct: 177 AGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRS 235
Query: 258 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF 317
           A+G   +V+ DC+G  K ++  +  T  GG + LVGMG   +TVPL  A  RE+D+  VF
Sbjct: 236 AIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVF 295
Query: 318 RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS-ARGGTAIKVMFN 371
           RY N +P+ LE++ SG+ +VK LVTH F   Q    +AFE +  +    IKVM +
Sbjct: 296 RYCNDYPIALEMVASGRCNVKQLVTHSFKLEQ--TVDAFEAARKKADNTIKVMIS 348

>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356

Iteration: 1
 Score =  319 bits (818), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 170/355 (47%), Positives = 234/355 (65%), Gaps = 15/355 (4%)
Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct: 8   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67
Query: 78  GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
           GHE +G +EKVGS VK L PGDRV        A+EPG      + CK GRYNL P + F 
Sbjct: 68  GHEASGTVEKVGSSVKHLKPGDRV--------AIEPGAPRENDEFCKMGRYNLSPSIFFC 119
Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
           ATPP  G+L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ G
Sbjct: 120 ATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCG 179
Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQ 256
           AGPIG+VT+L A+A GA ++V+ D+   RLS AKEIGAD ++++S  + Q+IA +VE   
Sbjct: 180 AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE--- 236
Query: 257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 316
             +G   +V+ +C G   ++   + AT +GG + LVG+G    TVPL  AA+REVD+ GV
Sbjct: 237 GQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGV 296
Query: 317 FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 371
           FRY NTWP+ + +L S  ++VKPLVTHRF    ++  EAFET  + G  +K+M  
Sbjct: 297 FRYCNTWPVAISMLASKSVNVKPLVTHRFPL--EKALEAFETFKK-GLGLKIMLK 348

>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356

Iteration: 1
 Score =  311 bits (797), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 166/346 (47%), Positives = 226/346 (65%), Gaps = 14/346 (4%)
Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+R  +VGICGSDVHY +  R  +F+VK+P V+
Sbjct: 8   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRXHSVGICGSDVHYWEYGRIGNFIVKKPXVL 67
Query: 78  GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
           GHE +G +EKVGS VK L PGDRV        A+EPG      + CK GRYNL P + F 
Sbjct: 68  GHEASGTVEKVGSSVKHLKPGDRV--------AIEPGAPRENDEFCKXGRYNLSPSIFFC 119
Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
           ATPP  G+L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ G
Sbjct: 120 ATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCG 179
Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQ 256
           AGPIG VT+L A+A GA ++V+ D+   RLS AKEIGAD ++++S  + Q+IA +VE   
Sbjct: 180 AGPIGXVTLLVAKAXGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE--- 236
Query: 257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 316
             +G   +V+ +C G   ++   + AT +GG + LVG+G    TVPL  AA+REVD+ GV
Sbjct: 237 GQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEXTTVPLLHAAIREVDIKGV 296
Query: 317 FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 362
           FRY NTWP+ +  L S  ++VKPLVTHRF    ++  EAFET  +G
Sbjct: 297 FRYCNTWPVAISXLASKSVNVKPLVTHRFPL--EKALEAFETFKKG 340

>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase Length = 363

Iteration: 1
 Score =  224 bits (571), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 140/332 (42%), Positives = 199/332 (59%), Gaps = 16/332 (4%)
Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVT 102
           +V V +++ GICGSDVH+ K       +V+   V+GHE AG +  V   VK++    +V 
Sbjct: 42  EVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSI----KV- 96
Query: 103 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 162
              GDRVA+EP + C  C+ C  GRYN C  + F +TPPV G L   V HPA  C K+  
Sbjct: 97  ---GDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKI-G 152
Query: 163 NVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV 222
           N+S E GAM EPLSV +   +RA +     VLI GAGPIGL+TML A+A GA  +VI D+
Sbjct: 153 NMSYENGAMLEPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDI 212
Query: 223 DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID--VSFDCAGLNKTMSTAL 280
           D+ RL  AKEI  + +      L    E  +KI ++ G GI+  V+ +C G+  +++ A+
Sbjct: 213 DEGRLKFAKEICPEVVTHKVERL-SAEESAKKIVESFG-GIEPAVALECTGVESSIAAAI 270
Query: 281 GATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPL 340
            A   GGKV ++G+G +E+ +P   A+VREVD+   +RY NTWP  + L+ +G +D+  L
Sbjct: 271 WAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRYCNTWPRAIRLVENGLVDLTRL 330
Query: 341 VTHRFGFSQKEVEEAFETSARGGT-AIKVMFN 371
           VTHRF    ++  +AFET++   T AIKV   
Sbjct: 331 VTHRFPL--EDALKAFETASDPKTGAIKVQIQ 360

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 181/342 (52%), Gaps = 21/342 (6%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           ++P  GP +VL+++ A  ICG+D+H  +    A   +K P + GHE AG + ++G  V+ 
Sbjct: 22  DVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVE- 80
Query: 95  LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA 154
              G  V    GD V++E  I C +C  C+ G+Y++C   K F      G  A   V PA
Sbjct: 81  ---GIEV----GDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPA 132
Query: 155 DLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA 214
              +K P ++  E   + EPL   V       I  ++ VLI GAGP+GL+ +  A+A GA
Sbjct: 133 QNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLGLLGIAVAKASGA 191
Query: 215 PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK 274
             +++ +  D+R  +AK++GAD +  ++   +D+ +EV  I    G G+DV  + +G  K
Sbjct: 192 YPVIVSEPSDFRRELAKKVGADYV--INPFEEDVVKEVXDITD--GNGVDVFLEFSGAPK 247
Query: 275 TMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTWPLCLELLR 331
            +   L A    G+V L+G+   ++T+      + + + + G+       TW     LL+
Sbjct: 248 ALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQ 307
Query: 332 SGKIDVKPLVTHRF-GFSQKEVEEAFETSARGGTAIKVMFNL 372
           SGK+++ P++TH++ GF +   EEAFE   R G   KV+F L
Sbjct: 308 SGKLNLDPIITHKYKGFDK--YEEAFEL-XRAGKTGKVVFXL 346

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 181/342 (52%), Gaps = 21/342 (6%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           ++P  GP +VL+++ A  ICG+D+H  +    A   +K P + GHE AG + ++G  V+ 
Sbjct: 23  DVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVE- 81
Query: 95  LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA 154
              G  V    GD V++E  I C +C  C+ G+Y++C   K F      G  A   V PA
Sbjct: 82  ---GIEV----GDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPA 133
Query: 155 DLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA 214
              +K P ++  E   + EPL   V       I  ++ VLI GAGP+GL+ +  A+A GA
Sbjct: 134 QNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLGLLGIAVAKASGA 192
Query: 215 PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK 274
             +++ +  D+R  +AK++GAD +  ++   +D+ +EV  I    G G+DV  + +G  K
Sbjct: 193 YPVIVSEPSDFRRELAKKVGADYV--INPFEEDVVKEVXDITD--GNGVDVFLEFSGAPK 248
Query: 275 TMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTWPLCLELLR 331
            +   L A    G+V L+G+   ++T+      + + + + G+       TW     LL+
Sbjct: 249 ALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQ 308
Query: 332 SGKIDVKPLVTHRF-GFSQKEVEEAFETSARGGTAIKVMFNL 372
           SGK+++ P++TH++ GF +   EEAFE   R G   KV+F L
Sbjct: 309 SGKLNLDPIITHKYKGFDK--YEEAFEL-XRAGKTGKVVFXL 347

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score =  158 bits (400), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 178/340 (52%), Gaps = 20/340 (5%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           ++P  GP +VL+++ A  ICG+D+H  +    A   +K P ++GHE AG + +VG  V+ 
Sbjct: 23  DVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVED 82
Query: 95  LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA 154
           L  GD ++        +E  I C +C  CK  RY++C   K F    + G  A+  + PA
Sbjct: 83  LQVGDYIS--------VETHIVCGKCYACKHNRYHVCQNTKIFGV-DMDGVFAHYAIVPA 133
Query: 155 DLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA 214
              +K P ++  E  A+ EPL   V       I   +  LI GAGP+GL+ +  A+A GA
Sbjct: 134 KNAWKNPKDMPPEYAALQEPLGNAVDTVLAGPIAGRST-LITGAGPLGLLGIAVAKASGA 192
Query: 215 PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK 274
             +++ +  ++R  +AK++GAD +  V+   +D  + V  I    G G++V  + +G  K
Sbjct: 193 YPVIVSEPSEFRRKLAKKVGADYV--VNPFEEDPVKFVMDITD--GAGVEVFLEFSGAPK 248
Query: 275 TMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTWPLCLELLR 331
            +   L A   GG+V L+G+   E+T+      + + ++V G+       TW     L++
Sbjct: 249 ALEQGLKAVTPGGRVSLLGLFPREVTIDFNNLIIFKALEVHGITGRHLWETWYTVSSLIQ 308
Query: 332 SGKIDVKPLVTHRF-GFSQKEVEEAFETSARGGTAIKVMF 370
           SGK+++ P++TH++ GF +   EEAFE    G T   V F
Sbjct: 309 SGKLNLDPIITHKYKGFDK--FEEAFELMRAGKTGKVVFF 346

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score =  153 bits (387), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/339 (33%), Positives = 173/339 (51%), Gaps = 21/339 (6%)
Query: 36  LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95
           +P  GP ++LVR++A  ICG+D+H  K    A   ++ P+V GHE +GV+E VG      
Sbjct: 20  VPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVG------ 73
Query: 96  VPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD 155
            PG R   V GD V+LE  I C  C  C+ G Y++C   +        G  A  VV PA+
Sbjct: 74  -PGVRRPQV-GDHVSLESHIVCHACPACRTGNYHVCLNTQILGV-DRDGGFAEYVVVPAE 130
Query: 156 LCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAP 215
             +  P ++  E  A+ EP    VH     +     +VLI GAGPIGL+  +  RA GA 
Sbjct: 131 NAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAG 190
Query: 216 RIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKT 275
            I++ D + YRL+ A+   AD +V     L++  + +E +++  G+G++V  + +G    
Sbjct: 191 PILVSDPNPYRLAFARPY-ADRLVN---PLEE--DLLEVVRRVTGSGVEVLLEFSGNEAA 244
Query: 276 MSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTWPLCLELLRS 332
           +   L A   GG+  ++G+    +   L    V R +   G+   R   TW     L+ S
Sbjct: 245 IHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYS 304
Query: 333 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 371
           G++D+ PL+THR   S+    EAF   A  G A+KV+ +
Sbjct: 305 GRVDLSPLLTHRLPLSR--YREAFGLLA-SGQAVKVILD 340

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score =  152 bits (383), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 166/334 (49%), Gaps = 21/334 (6%)
Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           A  L  V  + ++   +P  GP D+LV+++A GICG+D H L      +F    P+ +GH
Sbjct: 26  AVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLH----GEFPSTPPVTLGH 81
Query: 80  ECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 139
           E  G++ + GS V+ + PG R+T   GD     P ISC RC  C+ GR NLC  ++    
Sbjct: 82  EFCGIVVEAGSAVRDIAPGARIT---GD-----PNISCGRCPQCQAGRVNLCRNLRAIG- 132
Query: 140 PPVH--GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
             +H  G  A  V+ P    F++P  +    GA CEPL+  +H    + I   + V I+G
Sbjct: 133 --IHRDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSGIKAGSTVAILG 190
Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 257
            G IGL+T+  AR  GA  +++      +  +A+E+GA   V  S    D+ E +     
Sbjct: 191 GGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAG--DVVEAIAGPVG 248
Query: 258 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVG 315
            +  G+DV  +CAG+ +T+  +     AGG V ++G+      V + P  +  RE+ V+G
Sbjct: 249 LVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLG 308
Query: 316 VFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQ 349
            F          +L+ +G I++   ++ R    +
Sbjct: 309 SFINPFVHRRAADLVATGAIEIDRXISRRISLDE 342

>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346

Iteration: 1
 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 161/351 (45%), Gaps = 56/351 (15%)
Query: 43  DVLVRMKAVGICGSDV--------HYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           +V V++ + G+CGSD+        HY             P+ +GHE +G I+ VGS V  
Sbjct: 27  EVRVKIASSGLCGSDLPRIFKNGAHYY------------PITLGHEFSGYIDAVGSGVDD 74
Query: 95  LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA 154
           L PGD V  VP     L P   C+ C  C  G Y+ C +  F  +    G  A  +V   
Sbjct: 75  LHPGDAVACVP-----LLP---CFTCPECLKGFYSQCAKYDFIGSRR-DGGFAEYIVVKR 125
Query: 155 DLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA 214
              F LP ++ +E+GA  EP++VG+HA   A      NV+I+GAG IGL+ +  A A GA
Sbjct: 126 KNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGA 185
Query: 215 PRIVIVDVDDYRLSVAKEIGADNIVKVST----NLQDIAEEVEKIQKAMGTGIDVSFDCA 270
             +  +D+   +L++AK  GA      S      +Q +  E+   Q  + T        A
Sbjct: 186 KSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILET--------A 237
Query: 271 GLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-----REVDVVGVF-RYKNTWP 324
           G+ +T+  A+       ++ LVG  H ++   LT A       +E+ V+G +  Y + WP
Sbjct: 238 GVPQTVELAVEIAGPHAQLALVGTLHQDLH--LTSATFGKILRKELTVIGSWMNYSSPWP 295
Query: 325 -----LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 370
                    LL   K+ ++PL+ HR  F  +   +A    AR     KV+ 
Sbjct: 296 GQEWETASRLLTERKLSLEPLIAHRGSF--ESFAQAVRDIARNAMPGKVLL 344

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 164/355 (46%), Gaps = 42/355 (11%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIE 86
           LKI+  E P++   +VLVR+KA G+C +D+H        D+ VK   P++ GHE  G++E
Sbjct: 13  LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGIVE 68
Query: 87  KVGSEVKTLVPGDRVTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
           +VG  V  L  GDRV +         P +  +C  CD+C  G+  LC   K  A   V G
Sbjct: 69  EVGPGVTHLKVGDRVGI---------PWLYSACGHCDYCLSGQETLCEHQK-NAGYSVDG 118
Query: 145 SLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIG 202
             A      AD   K+PDN+S EE A   C  ++    A +     P   V I G G +G
Sbjct: 119 GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGIGGLG 177
Query: 203 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 262
            V +  A+A G   +V VD+ D +L +AKE+GAD +V        + E+  K  K    G
Sbjct: 178 HVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVV------NPLKEDAAKFMKEKVGG 230
Query: 263 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VFRYKN 321
           +  +   A       +A  +   GG   LVG+   EM +P+    +  + ++G +   + 
Sbjct: 231 VHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRK 290
Query: 322 TWPLCLELLRSGK----IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 372
                L+    GK    I+V+PL         +++ E F+   +G    +V+  L
Sbjct: 291 DLQEALQFAAEGKVKTIIEVQPL---------EKINEVFDRMLKGQINGRVVLTL 336

>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359

Iteration: 1
 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 145/328 (44%), Gaps = 27/328 (8%)
Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
           N L I   E+P+    +V V++K  GICGSD H     R  +   K P VIGHE  GVI+
Sbjct: 30  NQLSIIEREIPTPSAGEVRVKVKLAGICGSDSH---IYRGHNPFAKYPRVIGHEFFGVID 86
Query: 87  KVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--G 144
            VG  V++     RV    G+RVA++P +SC  C  C  G+ N+C  +       VH  G
Sbjct: 87  AVGEGVESA----RV----GERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLG---VHADG 135
Query: 145 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLV 204
             +   V PA   +K+P+ V+ +   M EP ++  +            VL+ GAGPIGL 
Sbjct: 136 GFSEYAVVPAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGLT 195
Query: 205 TMLAARA-FGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL--QDIAEEVEKIQKAMGT 261
            +   +  +    +++ D  D RL  AKE GAD  +  S     +  AE+        G 
Sbjct: 196 IVQVLKGVYNVKNVIVADRIDERLEKAKESGADWAINNSQTPLGESFAEK--------GI 247
Query: 262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 321
              +  D A     +  A+       ++ L+G       V       +E+ +       N
Sbjct: 248 KPTLIIDAACHPSILKEAVTLASPAARIVLMGFSSEPSEVIQQGITGKELSIFSSRLNAN 307
Query: 322 TWPLCLELLRSGKIDVKPLVTHRFGFSQ 349
            +P+ ++ L  G I  + L+TH F F  
Sbjct: 308 KFPVVIDWLSKGLIKPEKLITHTFDFQH 335

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 163/355 (45%), Gaps = 42/355 (11%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIE 86
           LKI+  E P++   +VLVR+KA G+C +D+H        D+ VK   P++ GHE  G++E
Sbjct: 13  LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGIVE 68
Query: 87  KVGSEVKTLVPGDRVTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
           +VG  V  L  GDRV +         P +  +C  CD+C  G+  LC   K  A   V G
Sbjct: 69  EVGPGVTHLKVGDRVGI---------PWLYSACGHCDYCLSGQETLCEHQK-NAGYSVDG 118
Query: 145 SLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIG 202
             A      AD   K+PDN+S EE A   C  ++    A +     P   V I G G  G
Sbjct: 119 GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGIGGFG 177
Query: 203 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 262
            V +  A+A G   +V VD+ D +L +AKE+GAD +V        + E+  K  K    G
Sbjct: 178 HVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVV------NPLKEDAAKFMKEKVGG 230
Query: 263 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VFRYKN 321
           +  +   A       +A  +   GG   LVG+   EM +P+    +  + ++G +   + 
Sbjct: 231 VHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRK 290
Query: 322 TWPLCLELLRSGK----IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 372
                L+    GK    I+V+PL         +++ E F+   +G    +V+  L
Sbjct: 291 DLQEALQFAAEGKVKTIIEVQPL---------EKINEVFDRMLKGQINGRVVLTL 336

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score =  108 bits (269), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 154/338 (45%), Gaps = 25/338 (7%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
           LK++   +P      VL++++A G+C SDVH  +     LR   D  VK P+ +GHE AG
Sbjct: 13  LKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84  VIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 143
            IE+VG EV        V    GD VA+ P      C +C+ G  +LC   ++       
Sbjct: 73  RIEEVGDEV--------VGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGI-NYD 123
Query: 144 GSLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGA-GPI 201
           G+ A  V+ P     +KL    ++E   +         A R+A++ P   ++++GA G +
Sbjct: 124 GAYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGL 183
Query: 202 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 261
           G + +  A+A     I+ VDV +  L  AK  GAD ++  S+  QD   E+ +I +  G 
Sbjct: 184 GTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVINASS--QDPVSEIRRITQ--GK 239
Query: 262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 321
           G D   D     KT+S         GK  +VG+   ++        + EV  +G      
Sbjct: 240 GADAVIDLNNSEKTLSIYPYVLAKQGKYVMVGLFGADLKYHAPLITLNEVQFIGSLVGNQ 299
Query: 322 TWPL-CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET 358
           +  L  + L  +GK  VKP+VT       +E  EA + 
Sbjct: 300 SDFLGIMSLAEAGK--VKPMVTKTMKL--EEANEAIDN 333

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 145/322 (45%), Gaps = 24/322 (7%)
Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G   L++    +P  GP +V VR+KA  +   DV   K +      +  P V+G + +GV
Sbjct: 11  GPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPL--PHVLGADGSGV 68
Query: 85  IEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
           ++ VG  V+   PGD V +         PG+SC RC+ C  G  NLCP  +       HG
Sbjct: 69  VDAVGPGVEGFAPGDEVVI--------NPGLSCGRCERCLAGEDNLCPRYQILGE-HRHG 119
Query: 145 SLANQVVHPADLCFKLPDNVSLEEGAMCEP--LSVGVHACRRANIGPETNVLIMGAGP-I 201
           + A  VV P       P N+S EE A      L+       +  + P  +VL+M AG  +
Sbjct: 120 TYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGV 179
Query: 202 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 261
            +  +  A+ FGA R++     + +L  AK +GAD  V  +    D  +EV ++    G 
Sbjct: 180 SVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTH--PDWPKEVRRLTG--GK 234
Query: 262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVG-VFRY 319
           G D   D  G        + AT  GG++ + G    +E T+P      R++ ++G     
Sbjct: 235 GADKVVDHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMAS 293
Query: 320 KNTWPLCLELLRSGKIDVKPLV 341
           K+     L  +  GK+  KP+V
Sbjct: 294 KSRLFPILRFVEEGKL--KPVV 313

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  104 bits (259), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 164/381 (43%), Gaps = 65/381 (17%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVS----GTLVAPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVT--LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------ 140
           G  V T+ PGD+V    +P           C +C  CK    NLC  +K  + P      
Sbjct: 77  GEGVTTVRPGDKVIPLFIP----------QCGKCSVCKHPEGNLC--LKNLSMPRGTMQD 124
Query: 141 ----------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV- 179
                     P+H  L           + + D +S+ +     PL          S G  
Sbjct: 125 GTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLVGCGFSTGYG 180
Query: 180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 239
            A + A +   +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA   V
Sbjct: 181 SAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV 240
Query: 240 KVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGH 296
               N QD  + ++++   M   G+D SF+  G   TM  AL + C  A G   +VG+  
Sbjct: 241 ----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAAL-SCCQEAYGVSVIVGVPP 295
Query: 297 HEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKE 351
               + + P         +  + G F+ K++ P  +    + K  + PL+TH   F  ++
Sbjct: 296 DSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EK 353
Query: 352 VEEAFETSARGGTAIKVMFNL 372
           + E F+   R G +I+ +   
Sbjct: 354 INEGFDL-LRSGKSIRTILTF 373

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  104 bits (259), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 164/381 (43%), Gaps = 65/381 (17%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVS----GTLVAPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVT--LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------ 140
           G  V T+ PGD+V    +P           C +C  CK    NLC  +K  + P      
Sbjct: 77  GEGVTTVRPGDKVIPLFIP----------QCGKCSVCKHPEGNLC--LKNLSMPRGTMQD 124
Query: 141 ----------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV- 179
                     P+H  L           + + D +S+ +     PL          S G  
Sbjct: 125 GTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLVGCGFSTGYG 180
Query: 180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 239
            A + A +   +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA   V
Sbjct: 181 SAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV 240
Query: 240 KVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGH 296
               N QD  + ++++   M   G+D SF+  G   TM  AL + C  A G   +VG+  
Sbjct: 241 ----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAAL-SCCQEAYGVSVIVGVPP 295
Query: 297 HEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKE 351
               + + P         +  + G F+ K++ P  +    + K  + PL+TH   F  ++
Sbjct: 296 DSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EK 353
Query: 352 VEEAFETSARGGTAIKVMFNL 372
           + E F+   R G +I+ +   
Sbjct: 354 INEGFDL-LRSGKSIRTILTF 373

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 153/315 (48%), Gaps = 26/315 (8%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           EL ++ P + L+ M+  G+C +D+H    +   DF  K   V+GHE  G+++++G++V +
Sbjct: 20  ELRAIKPNEALLDMEYCGVCHTDLH----VAAGDFGNKAGTVLGHEGIGIVKEIGADVSS 75
Query: 95  LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA 154
           L  GDRV++             C  C++C  G    C E+K  A   V G +A + +  A
Sbjct: 76  LQVGDRVSVAWFFE-------GCGHCEYCVSGNETFCREVK-NAGYSVDGGMAEEAIVVA 127
Query: 155 DLCFKLPDNVSLEEGAMCEPLSVGVH-ACRRANIGPETNVLIMGAGPIG-LVTMLAARAF 212
           D   K+PD +   E +      V  + A + + + P    +I GAG +G L    A   F
Sbjct: 128 DYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVF 187
Query: 213 GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI--AEEVEKIQKAMGTGIDVSFDCA 270
           GA +++ VD++  +L++AK+IGAD    V+ N  D+   +E++KI    G G+  +  CA
Sbjct: 188 GA-KVIAVDINQDKLNLAKKIGAD----VTINSGDVNPVDEIKKITG--GLGVQSAIVCA 240
Query: 271 GLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VFRYKNTWPLCLEL 329
                   A+ +    GK+  V + + EMT+ +       V+V G +   +       + 
Sbjct: 241 VARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQF 300
Query: 330 LRSGKIDVKPLVTHR 344
              GK  VKP+V  R
Sbjct: 301 GAEGK--VKPIVATR 313

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 161/359 (44%), Gaps = 50/359 (13%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G + L I+  E+      +V +++ A  +C +D++     + A F    P+V+GHE
Sbjct: 14  AWKTG-SPLCIEEIEVSPPKACEVRIQVIATCVCHTDINATDPKKKALF----PVVLGHE 68
Query: 81  CAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP 140
           CAG++E VG  V    PGD+V  +P       P   C RC  C     NLC +++ F  P
Sbjct: 69  CAGIVESVGPGVTNFKPGDKV--IP----FFAP--QCKRCKLCLSPLTNLCGKLRNFKYP 120
Query: 141 PVHGSLANQ-------------------------VVHPADLCFKLPDNVSLEEGAM--CE 173
            +   L                            VV  A+L  ++ D  +LE   +  C 
Sbjct: 121 TIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA-RVDDEANLERVCLIGCG 179
Query: 174 PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI 233
             S    A   A + P +   + G G +GL  ++  +  GA RI+ +D++  +   AK +
Sbjct: 180 FSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL 239
Query: 234 GADNIVKVSTNLQDIAEEVEK-IQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCL 291
           GA + +    N +++ + V+  I +    G+D S DCAG  +T+  A+  T  G G   +
Sbjct: 240 GATDCL----NPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTV 295
Query: 292 VGMGHHEMTVPLTPAAV-REVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 347
           VG    EMT+P     + R ++    G ++  ++ P  +   ++ K D+  LVTH   F
Sbjct: 296 VGAKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF 354

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 161/359 (44%), Gaps = 50/359 (13%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G + L I+  E+      +V +++ A  +C +D++     + A F    P+V+GHE
Sbjct: 14  AWKTG-SPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALF----PVVLGHE 68
Query: 81  CAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP 140
           CAG++E VG  V    PGD+V  +P       P   C RC  C     NLC +++ F  P
Sbjct: 69  CAGIVESVGPGVTNFKPGDKV--IP----FFAP--QCKRCKLCLSPLTNLCGKLRNFKYP 120
Query: 141 PVHGSLANQ-------------------------VVHPADLCFKLPDNVSLEEGAM--CE 173
            +   L                            VV  A+L  ++ D  +LE   +  C 
Sbjct: 121 TIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA-RVDDEANLERVCLIGCG 179
Query: 174 PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI 233
             S    A   A + P +   + G G +GL  ++  +  GA RI+ +D++  +   AK +
Sbjct: 180 FSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL 239
Query: 234 GADNIVKVSTNLQDIAEEVEK-IQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCL 291
           GA + +    N +++ + V+  I +    G+D S DCAG  +T+  A+  T  G G   +
Sbjct: 240 GATDCL----NPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTV 295
Query: 292 VGMGHHEMTVPLTPAAV-REVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 347
           VG    EMT+P     + R ++    G ++  ++ P  +   ++ K D+  LVTH   F
Sbjct: 296 VGAKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF 354

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 153/315 (48%), Gaps = 26/315 (8%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           EL ++ P + L+ M+  G+C +D+H    +   D+  K   V+GHE  G+++++G++V +
Sbjct: 20  ELRAIKPNEALLDMEYCGVCHTDLH----VAAGDYGNKAGTVLGHEGIGIVKEIGADVSS 75
Query: 95  LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA 154
           L  GDRV++             C  C++C  G    C E+K  A   V G +A + +  A
Sbjct: 76  LQVGDRVSVAWFFE-------GCGHCEYCVSGNETFCREVKN-AGYSVDGGMAEEAIVVA 127
Query: 155 DLCFKLPDNVSLEEGAMCEPLSVGVH-ACRRANIGPETNVLIMGAGPIG-LVTMLAARAF 212
           D   K+PD +   E +      V  + A + + + P    +I GAG +G L    A   F
Sbjct: 128 DYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVF 187
Query: 213 GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI--AEEVEKIQKAMGTGIDVSFDCA 270
           GA +++ VD++  +L++AK+IGAD I+    N  D+   +E++KI    G G+  +  CA
Sbjct: 188 GA-KVIAVDINQDKLNLAKKIGADVII----NSGDVNPVDEIKKITG--GLGVQSAIVCA 240
Query: 271 GLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VFRYKNTWPLCLEL 329
                   A+ +    GK+  V + + EMT+ +       V+V G +   +       + 
Sbjct: 241 VARIAFEQAVASLKPMGKMVAVALPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQF 300
Query: 330 LRSGKIDVKPLVTHR 344
              GK  VKP+V  R
Sbjct: 301 GAEGK--VKPIVATR 313

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  102 bits (253), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 158/362 (43%), Gaps = 55/362 (15%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     Y+V ++M AVGICG+D H +      + V   P+++GHE AG++E V
Sbjct: 21  FSIEDVEVAPPKAYEVRIKMVAVGICGTDDHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-------------MK 135
           G  V T+ PGD+V  +P       P   C +C  CK    N C +              +
Sbjct: 77  GEGVTTVKPGDKV--IP----LFTP--QCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTR 128
Query: 136 FFAT--PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HAC 182
            F     P+H  L           + + D  ++ +     PL          S G   A 
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 242
             A + P +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA   +   
Sbjct: 185 NVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI--- 241
Query: 243 TNLQDIAEEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVGMGHHEMT 300
            N QD  + ++++ K M   G+D SF+  G L+  M++ L    A G   +VG+      
Sbjct: 242 -NPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQN 300
Query: 301 VPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 355
           + + P         +  V G F+ K   P  +    + K  +  L+TH   F  +++ E 
Sbjct: 301 LSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEG 358
Query: 356 FE 357
           F+
Sbjct: 359 FD 360

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score =  100 bits (250), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 163/379 (43%), Gaps = 60/379 (15%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 140
           G  V T+ PGD+V  +   +        C +C  CK    N C +    + P        
Sbjct: 77  GEGVTTVRPGDKVIPLATPQ--------CGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGT 127
Query: 141 --------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HA 181
                   P+H  L           + + D +S+ +     PL          S G   A
Sbjct: 128 SRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 241
            + A +   +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA   V  
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV-- 241
Query: 242 STNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHE 298
             N QD  + ++++   M   G+D SF+  G   TM TAL + C  A G   +VG+    
Sbjct: 242 --NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIVGVPPDS 298
Query: 299 MTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 353
             + + P         +  + G F+ K++ P  +    + K  + PL+TH   F  +++ 
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKIN 356
Query: 354 EAFETSARGGTAIKVMFNL 372
           E F+   R G +I+ +   
Sbjct: 357 EGFDL-LRSGESIRTILTF 374

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 164/379 (43%), Gaps = 60/379 (15%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 140
           G  V T+ PGD+V  +P       P   C +C  CK    N C +    + P        
Sbjct: 77  GEGVTTVRPGDKV--IP----LFTP--QCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGT 127
Query: 141 --------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HA 181
                   P+H  L           + + D +S+ +     PL          S G   A
Sbjct: 128 SRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 241
            + A +   +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA   V  
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV-- 241
Query: 242 STNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHE 298
             N QD  + ++++   M   G+D SF+  G   TM TAL + C  A G   +VG+    
Sbjct: 242 --NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIVGVPPDS 298
Query: 299 MTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 353
             + + P         +  + G F+ K++ P  +    + K  + PL+TH   F  +++ 
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKIN 356
Query: 354 EAFETSARGGTAIKVMFNL 372
           E F+   R G +I+ +   
Sbjct: 357 EGFDL-LRSGESIRTILTF 374

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 164/379 (43%), Gaps = 60/379 (15%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 140
           G  V T+ PGD+V  +P       P   C +C  CK    N C +    + P        
Sbjct: 77  GEGVTTVRPGDKV--IP----LFTP--QCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGT 127
Query: 141 --------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HA 181
                   P+H  L           + + D +S+ +     PL          S G   A
Sbjct: 128 SRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 241
            + A +   +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA   V  
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV-- 241
Query: 242 STNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHE 298
             N QD  + ++++   M   G+D SF+  G   TM TAL + C  A G   +VG+    
Sbjct: 242 --NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIVGVPPDS 298
Query: 299 MTVPLTPAAVREVD-----VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 353
             + + P  +         + G F+ K++ P  +    + K  + PL+TH   F  +++ 
Sbjct: 299 QNLSMNPMLLLSGRTWKGCIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKIN 356
Query: 354 EAFETSARGGTAIKVMFNL 372
           E F+   R G +I+ +   
Sbjct: 357 EGFDL-LRSGESIRTILTF 374

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 123/270 (45%), Gaps = 22/270 (8%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIE 86
           L I    +P  GP  + V ++A G+C +D+H  +     D+ VK   P + GHE  G + 
Sbjct: 38  LTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAE----GDWPVKPNPPFIPGHEGVGFVS 93
Query: 87  KVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 146
            VGS VK +  GDRV  +P    A      C  C HC GG   LC E +      V+G  
Sbjct: 94  AVGSGVKHVKEGDRVG-IPWLYTA------CGHCRHCLGGWETLCEE-QLNTGYSVNGGF 145
Query: 147 ANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLV 204
           A  VV   +    LP N+   E A  +C  ++V     +  +  P   V+I G G +G +
Sbjct: 146 AEYVVADPNFVGHLPKNIDFNEIAPVLCAGVTV-YKGLKVTDTKPGDWVVISGIGGLGHM 204
Query: 205 TMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 264
            +  ARA G   +  VD+DD +L +A+ +GA     V+ N + +A+    I+K    G  
Sbjct: 205 AVQYARAMGL-NVAAVDIDDRKLDLARRLGA----TVTVNAKTVADPAAYIRKETDGGAQ 259
Query: 265 VSFDCAGLNKTMSTALGATCAGGKVCLVGM 294
                A   K    ALG    GG V L G+
Sbjct: 260 GVLVTAVSPKAFEQALGMVARGGTVSLNGL 289

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 164/379 (43%), Gaps = 60/379 (15%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 140
           G  V T+ PGD+V  +P       P   C +C  CK    N C +    + P        
Sbjct: 77  GEGVTTVRPGDKV--IP----LWTP--QCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGT 127
Query: 141 --------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HA 181
                   P+H  L           + + D +S+ +     PL          S G   A
Sbjct: 128 SRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 241
            + A +   +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA   V  
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV-- 241
Query: 242 STNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHE 298
             N QD  + ++++   M   G+D SF+  G   TM TAL + C  A G   +VG+    
Sbjct: 242 --NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIVGVPPDS 298
Query: 299 MTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 353
             + + P         +  + G F+ K++ P  +    + K  + PL+TH   F  +++ 
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKIN 356
Query: 354 EAFETSARGGTAIKVMFNL 372
           E F+   R G +I+ +   
Sbjct: 357 EGFDL-LRSGESIRTILTF 374

>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 152/348 (43%), Gaps = 57/348 (16%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           E P+ GP+D +VR  AV  C SD+H   T+       +  M++GHE  G + +VGSEVK 
Sbjct: 18  EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95  LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQ 149
             PGDRV +VP    A+ P    WR    + G +     M    KF      V G   + 
Sbjct: 75  FKPGDRV-VVP----AITPD---WRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH- 125
Query: 150 VVHPADLCF-KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTML 207
            V+ AD+    LP  + LE   M  + ++ G H    A+I     V ++G GP+GL+ + 
Sbjct: 126 -VNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVA 184
Query: 208 AARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 267
            A+  GA RI+ V      +  AK  GA +IV    N +D   E + +    G G+D + 
Sbjct: 185 GAKLRGAGRIIAVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIMNLTEGKGVDAAI 240
Query: 268 DCAGLNKTMSTALGATCAGGKVCLV------------------GMGHHEMTVPLTPAAVR 309
              G    M+TA+     GG +  V                  GM H  +   L P    
Sbjct: 241 IAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLDVPRLEWGCGMAHKTIKGGLCPG--- 297
Query: 310 EVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 356
                G  R +      ++L+   ++D   LVTH F GF    +E+AF
Sbjct: 298 -----GRLRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 163/379 (43%), Gaps = 60/379 (15%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD   +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 140
           G  V T+ PGD+V  +P       P   C +C  CK    N C +    + P        
Sbjct: 77  GEGVTTVRPGDKV--IP----LFTP--QCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGT 127
Query: 141 --------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HA 181
                   P+H  L           + + D +S+ +     PL          S G   A
Sbjct: 128 SRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 241
            + A +   +   + G G +GL  ++  +A GA RI+ VD++  R + AKE+GA   V  
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATECV-- 241
Query: 242 STNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHE 298
             N QD  + ++++   M   G+D SF+  G   TM TAL + C  A G   +VG+    
Sbjct: 242 --NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIVGVPPDS 298
Query: 299 MTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 353
             + + P         +  + G F+ K++ P  +    + K  + PL+TH   F  +++ 
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKIN 356
Query: 354 EAFETSARGGTAIKVMFNL 372
           E F+   R G +I+ +   
Sbjct: 357 EGFDL-LRSGESIRTILTF 374

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 137/291 (47%), Gaps = 24/291 (8%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM--VIGHECAGVIE 86
           L+I+  ++P  GP  VLV+++A G+C +D+H  +     D+ VK P+  + GHE  G + 
Sbjct: 19  LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAE----GDWPVKPPLPFIPGHEGVGYVA 74
Query: 87  KVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 146
            VGS V  +  GDRV  +P    A      C  C+HC  G   LC E +      V+G  
Sbjct: 75  AVGSGVTRVKEGDRVG-IPWLYTA------CGCCEHCLTGWETLC-ESQQNTGYSVNGGY 126
Query: 147 ANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLV 204
           A  V+   +    LP NV   E A  +C  ++V     ++ N  P   V I G G +G V
Sbjct: 127 AEYVLADPNYVGILPKNVEFAEIAPILCAGVTV-YKGLKQTNARPGQWVAISGIGGLGHV 185
Query: 205 TMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 264
            +  ARA G   +  +D+DD +L +A+++GA   V          + VE IQ+ +G G  
Sbjct: 186 AVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNARQE-----DPVEAIQRDIG-GAH 238
Query: 265 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 315
                A  N     A+G    GG + LVG+   +   P+    ++ + + G
Sbjct: 239 GVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAG 289

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 163/379 (43%), Gaps = 60/379 (15%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 140
           G  V T+ PGD+V  +P       P   C +C  CK    N C +    + P        
Sbjct: 77  GEGVTTVRPGDKV--IP----LFTP--QCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGT 127
Query: 141 --------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HA 181
                   P+H  L           + + D +S+ +     PL          S G   A
Sbjct: 128 SRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 241
            + A +   +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA   V  
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV-- 241
Query: 242 STNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHE 298
             N QD  + ++++   M   G+D SF+  G   TM TAL + C  A G   + G+    
Sbjct: 242 --NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVITGVPPDS 298
Query: 299 MTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 353
             + + P         +  + G F+ K++ P  +    + K  + PL+TH   F  +++ 
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKIN 356
Query: 354 EAFETSARGGTAIKVMFNL 372
           E F+   R G +I+ +   
Sbjct: 357 EGFDL-LRSGESIRTILTF 374

>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 152/348 (43%), Gaps = 57/348 (16%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           E P+ GP+D +VR  AV  C SD+H   T+       +  M++GHE  G + +VGSEVK 
Sbjct: 18  EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95  LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQ 149
             PGDRV +VP    A+ P    WR    + G +     M    KF      V G   + 
Sbjct: 75  FKPGDRV-VVP----AITPD---WRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH- 125
Query: 150 VVHPADLCF-KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTML 207
            V+ AD+    LP  + LE   M  + ++ G H    A+I     V ++G GP+GL+ + 
Sbjct: 126 -VNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVA 184
Query: 208 AARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 267
            A+  GA RI+ V      +  AK  GA +IV    N +D   E + +    G G+D + 
Sbjct: 185 GAKLRGAGRIIAVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIMNLTEGKGVDAAI 240
Query: 268 DCAGLNKTMSTALGATCAGGKVCLV------------------GMGHHEMTVPLTPAAVR 309
              G    M+TA+     GG +  V                  GM H  +   L P    
Sbjct: 241 IAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLPVPRLEWGCGMAHKTIKGGLCPG--- 297
Query: 310 EVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 356
                G  R +      ++L+   ++D   LVTH F GF    +E+AF
Sbjct: 298 -----GRLRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 146/343 (42%), Gaps = 41/343 (11%)
Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
           P+ GP ++L+++ A G+C SD+ ++  +  A +    P+ +GHE  G + ++G  V    
Sbjct: 21  PTPGPGEILLKVTAAGLCHSDI-FVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFG 79
Query: 97  PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA-TPPVHGSLANQ----VV 151
            GD V        A+     C  C  C  GR N C        TPP  GS  +     +V
Sbjct: 80  VGDAV--------AVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIV 131
Query: 152 HPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRAN--IGPETNVLIMGAGPIGLVTMLAA 209
             A     + D   +    + +      HA  R    +GP +  +++G G +G V +   
Sbjct: 132 DSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQIL 191
Query: 210 RAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 269
           RA  A R++ VD+DD RL++A+E+GAD  VK      D   E+       G G    FD 
Sbjct: 192 RAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTG-----GQGATAVFDF 246
Query: 270 AGLNKTMSTALGATCAGGKVCLVGM---GHHEMTVPLTPAAVREVDVVGVFRYKNTWPLC 326
            G   T+ TA       G + +VG+    H ++   + P     V       Y  T    
Sbjct: 247 VGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVT-----PYWGTRSEL 301
Query: 327 LE---LLRSGKIDVKPLVTHRFGFSQKEVEEAF----ETSARG 362
           +E   L R+G++D+     H   F+  E   A+    E S RG
Sbjct: 302 MEVVALARAGRLDI-----HTETFTLDEGPAAYRRLREGSIRG 339

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 163/379 (43%), Gaps = 60/379 (15%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 140
           G  V T+ PGD+V  +P       P   C +C  CK    N C +    + P        
Sbjct: 77  GEGVTTVRPGDKV--IP----LFTP--QCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGT 127
Query: 141 --------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HA 181
                   P+H  L           + + D +S+ +     PL          S G   A
Sbjct: 128 SRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 241
            + A +   +   + G G  GL  ++  +A GA RI+ VD++  + + AKE+GA   V  
Sbjct: 184 VKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV-- 241
Query: 242 STNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHE 298
             N QD  + ++++   M   G+D SF+  G   TM TAL + C  A G   +VG+    
Sbjct: 242 --NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIVGVPPDS 298
Query: 299 MTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 353
             + + P         +  + G F+ K++ P  +    + K  + PL+TH   F  +++ 
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKIN 356
Query: 354 EAFETSARGGTAIKVMFNL 372
           E F+   R G +I+ +   
Sbjct: 357 EGFDL-LRSGESIRTILTF 374

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 161/374 (43%), Gaps = 55/374 (14%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     Y+V ++M AVGIC +D H +      + V   P+++GHE AG++E V
Sbjct: 21  FSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-------------MK 135
           G  V T+ PGD+V  +P       P   C +C  CK    N C +              +
Sbjct: 77  GEGVTTVKPGDKV--IP----LFTP--QCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTR 128
Query: 136 FFAT--PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HAC 182
            F     P+H  L           + + D  ++ +     PL          S G   A 
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 242
             A + P +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA   +   
Sbjct: 185 NVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI--- 241
Query: 243 TNLQDIAEEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVGMGHHEMT 300
            N QD  + ++++ K M   G+D SF+  G L+  M++ L    A G   +VG+      
Sbjct: 242 -NPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQN 300
Query: 301 VPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 355
           + + P         +  V G F+ K   P  +    + K  +  L+TH   F  +++ E 
Sbjct: 301 LSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEG 358
Query: 356 FETSARGGTAIKVM 369
           F+    G +   V+
Sbjct: 359 FDLLHSGKSICTVL 372

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 163/379 (43%), Gaps = 60/379 (15%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 140
           G  V T+ PGD+V  +P       P   C +C  CK    N C +    + P        
Sbjct: 77  GEGVTTVRPGDKV--IP----LFTP--QCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGT 127
Query: 141 --------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HA 181
                   P+H  L           + + D +S+ +     PL          S G   A
Sbjct: 128 SRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 241
            + A +   +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA   V  
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV-- 241
Query: 242 STNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHE 298
             N QD  + ++++   M   G+D SF+  G   TM TAL + C  A G   +V +    
Sbjct: 242 --NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIVAVTPDS 298
Query: 299 MTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 353
             + + P         +  + G F+ K++ P  +    + K  + PL+TH   F  +++ 
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKIN 356
Query: 354 EAFETSARGGTAIKVMFNL 372
           E F+   R G +I+ +   
Sbjct: 357 EGFDL-LRSGESIRTILTF 374

>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 159/367 (43%), Gaps = 71/367 (19%)
Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
           +LG+N L     E P  G YD +VR  AV  C SD+H +      D   ++ M++GHE  
Sbjct: 6   MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAV 62
Query: 83  GVIEKVGSEVKTLVPGDRVTL---VPGDR-VALEPG--------ISCWRCDHCKGGRYNL 130
           G + +VGSEVK   PGDRV +    P  R + ++ G        ++ W+  + K G +  
Sbjct: 63  GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFG- 121
Query: 131 CPEMKFFATPPVHGSLANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGVHACRRANIG 188
               ++F             V+ AD+    LP ++ LE   M  + ++ G H    A+I 
Sbjct: 122 ----EYFH------------VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIE 165
Query: 189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 248
               V ++G GP+GL+ +  A+  GA RI+ V      +  AK  GA +IV    N +D 
Sbjct: 166 LGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIV----NYKDG 221
Query: 249 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV---------------- 292
             E + +    G G+D +    G    M+TA+     GG +  V                
Sbjct: 222 PIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLPVPRLEW 281
Query: 293 --GMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQ 349
             GM H  +   L P         G  R +    +  +++   ++D+  LVTH + GF  
Sbjct: 282 GCGMAHKTIKGGLCPG--------GRLRAE----MLRDMVVYNRVDLSKLVTHVYHGFDH 329
Query: 350 KEVEEAF 356
             +EEA 
Sbjct: 330 --IEEAL 334

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 157/362 (43%), Gaps = 55/362 (15%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     Y+V ++M AVGIC +D H +      + V   P+++GHE AG++E V
Sbjct: 21  FSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-------------MK 135
           G  V T+ PGD+V  +P       P   C +C  CK    N C +              +
Sbjct: 77  GEGVTTVKPGDKV--IP----LFTP--QCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTR 128
Query: 136 FFAT--PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HAC 182
            F     P+H  L           + + D  ++ +     PL          S G   A 
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 242
             A + P +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA   +   
Sbjct: 185 NVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI--- 241
Query: 243 TNLQDIAEEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVGMGHHEMT 300
            N QD  + ++++ K M   G+D SF+  G L+  M++ L    A G   +VG+      
Sbjct: 242 -NPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQN 300
Query: 301 VPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 355
           + + P         +  V G F+ K   P  +    + K  +  L+TH   F  +++ E 
Sbjct: 301 LSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEG 358
Query: 356 FE 357
           F+
Sbjct: 359 FD 360

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 157/362 (43%), Gaps = 55/362 (15%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     Y+V ++M AVGIC +D H +      + V   P+++GHE AG++E V
Sbjct: 21  FSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-------------MK 135
           G  V T+ PGD+V  +P       P   C +C  CK    N C +              +
Sbjct: 77  GEGVTTVKPGDKV--IP----LFTP--QCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTR 128
Query: 136 FFAT--PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HAC 182
            F     P+H  L           + + D  ++ +     PL          S G   A 
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 242
             A + P +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA   +   
Sbjct: 185 NVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI--- 241
Query: 243 TNLQDIAEEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVGMGHHEMT 300
            N QD  + ++++ K M   G+D SF+  G L+  M++ L    A G   +VG+      
Sbjct: 242 -NPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQN 300
Query: 301 VPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 355
           + + P         +  V G F+ K   P  +    + K  +  L+TH   F  +++ E 
Sbjct: 301 LSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEG 358
Query: 356 FE 357
           F+
Sbjct: 359 FD 360

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 163/379 (43%), Gaps = 60/379 (15%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 140
           G  V T+ PGD+V  +P       P   C +C  CK    N C +    + P        
Sbjct: 77  GEGVTTVRPGDKV--IP----LFTP--QCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGT 127
Query: 141 --------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HA 181
                   P+H  L           + + D +S+ +     PL          S G   A
Sbjct: 128 SRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 241
            + A +   +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA   V  
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV-- 241
Query: 242 STNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHE 298
             N QD  + ++++   M   G+D SF+  G   TM TAL + C  A G   + G+    
Sbjct: 242 --NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVISGVPPDS 298
Query: 299 MTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 353
             + + P         +  + G F+ K++ P  +    + K  + PL+TH   F  +++ 
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKIN 356
Query: 354 EAFETSARGGTAIKVMFNL 372
           E F+   R G +I+ +   
Sbjct: 357 EGFDL-LRSGESIRTILTF 374

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score = 98.6 bits (244), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 163/379 (43%), Gaps = 60/379 (15%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 140
           G  V T+ PGD+V  +P       P   C +C  CK    N C +    + P        
Sbjct: 77  GEGVTTVRPGDKV--IP----LWTP--QCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGT 127
Query: 141 --------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HA 181
                   P+H  L           + + D +S+ +     PL          S G   A
Sbjct: 128 SRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 241
            + A +   +   + G G  GL  ++  +A GA RI+ VD++  + + AKE+GA   V  
Sbjct: 184 VKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV-- 241
Query: 242 STNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHE 298
             N QD  + ++++   M   G+D SF+  G   TM TAL + C  A G   +VG+    
Sbjct: 242 --NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIVGVPPDS 298
Query: 299 MTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 353
             + + P         +  + G F+ K++ P  +    + K  + PL+TH   F  +++ 
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKIN 356
Query: 354 EAFETSARGGTAIKVMFNL 372
           E F+   R G +I+ +   
Sbjct: 357 EGFDL-LRSGESIRTILTF 374

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 162/358 (45%), Gaps = 47/358 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M AVGICG+D H +        V   P+++GHE AG++E V
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVS----GTMVTPLPVILGHEAAGIVESV 76
Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLC-------PE-------M 134
           G  V T+ PGD+V  +P   +A+     C +C  CK    N C       P+        
Sbjct: 77  GEGVTTVKPGDKV--IP---LAIP---QCGKCRICKNPESNYCLKNDVSNPQGTLQDGTS 128
Query: 135 KFFAT-PPVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGV-HACRRAN 186
           +F     P+H      + +   V   +   K+     LE+  +     S G   A   A 
Sbjct: 129 RFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAK 188
Query: 187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ 246
           + P +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA   +    N Q
Sbjct: 189 VTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECI----NPQ 244
Query: 247 DIAEEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT 304
           D  + ++++ K M   G+D SF+  G L+  M++ L    A G   +VG+      + + 
Sbjct: 245 DYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSMN 304
Query: 305 P-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 357
           P         +  ++G F+ K   P  +    + K  +  L+TH   F  +++ E F+
Sbjct: 305 PMLLLTGRTWKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPF--EKINEGFD 360

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 166/373 (44%), Gaps = 48/373 (12%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +      + V   P+++GHE AG++E V
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE--------------M 134
           G  V T+ PGD+V  +P       P   C +C  CK    N C +               
Sbjct: 77  GEGVTTVKPGDKV--IP----LFTP--QCGKCRICKNPESNYCLKNDLGNPRGTLQDGTR 128
Query: 135 KFFAT-PPVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGV-HACRRAN 186
           +F  +  P+H      + +   V   +   K+     LE+  +     S G   A + A 
Sbjct: 129 RFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAK 188
Query: 187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ 246
           + P +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA   +    N Q
Sbjct: 189 VTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECI----NPQ 244
Query: 247 DIAEEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT 304
           D  + ++++ K M   G+D SF+  G L+  M++ L    A G   +VG+      + + 
Sbjct: 245 DYKKPIQEVLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDSQNLSIN 304
Query: 305 P-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS 359
           P         +  + G F+ K + P  +    + K  +  L+T+   F  +++ E F+  
Sbjct: 305 PMLLLTGRTWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNVLPF--EKINEGFDL- 361
Query: 360 ARGGTAIKVMFNL 372
            R G +I+ +   
Sbjct: 362 LRSGKSIRTVLTF 374

>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By E. Histolytica Adh Length = 352

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 151/348 (43%), Gaps = 57/348 (16%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           E P+ GP+D +VR  AV  C SD+H   T+       +  M++GHE  G + +VGSEVK 
Sbjct: 18  EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95  LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQ 149
             PGDRV +VP    A+ P    WR    + G +     M    KF      V G   + 
Sbjct: 75  FKPGDRV-VVP----AITPD---WRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH- 125
Query: 150 VVHPADLCF-KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTML 207
            V+ AD+    LP  + LE   M  + ++ G H    ANI     V ++G GP+GL+++ 
Sbjct: 126 -VNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGIGPVGLMSVA 184
Query: 208 AARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 267
            A   GA RI  V    +   +A E GA +I+       DI E++  ++   G G+D   
Sbjct: 185 GANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQI--LKATDGKGVDKVV 240
Query: 268 DCAGLNKTMSTALGATCAGGKV------------------CLVGMGHHEMTVPLTPAAVR 309
              G   T + A+     G  +                    VGMGH  +   L P    
Sbjct: 241 IAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPG--- 297
Query: 310 EVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 356
                G  R +      ++L+   ++D   LVTH F GF    +E+AF
Sbjct: 298 -----GRLRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 145/313 (46%), Gaps = 35/313 (11%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L  + FE+  +    +LV + + G+CGSDVH     R  D  V  P+++GHE AG + +V
Sbjct: 30  LVYKEFEISDIPRGSILVEILSAGVCGSDVH---MFRGEDPRVPLPIILGHEGAGRVVEV 86
Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRY-NLCPEMKFFAT-------P 140
             E + L   +   L PGD +    GI+C  C  CK  +   LCP  K +         P
Sbjct: 87  NGEKRDL---NGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYP 143
Query: 141 PVHGSLANQVV-HPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPET----NVLI 195
            + G  ++ +V  P     K+ +   L+  AM   +  G  A    +  PE+     V+I
Sbjct: 144 HLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMA--MCSGATAYHAFDEYPESFAGKTVVI 201
Query: 196 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 255
            GAGP+GL  ++ AR+ GA  ++++     RL +A+EIGAD    ++ N ++ +  VE+ 
Sbjct: 202 QGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD----LTLNRRETS--VEER 255
Query: 256 QKAM-----GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVRE 310
           +KA+     G G D   +  G ++ +         GG   + G+   +  VP     V E
Sbjct: 256 RKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFK---VYE 312
Query: 311 VDVVGVFRYKNTW 323
             V+    +K  W
Sbjct: 313 WLVLKNATFKGIW 325

>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In Complex With Cacodylate Length = 360

Iteration: 1
 Score = 94.7 bits (234), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 151/361 (41%), Gaps = 59/361 (16%)
Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
           +LG+  +     ++P  GP D LVR  A+  C SD H +      D   +  M++GHE  
Sbjct: 6   MLGIGRIGWIEKKIPECGPLDALVRPLALAPCTSDTHTVWAGAIGD---RHDMILGHEAV 62
Query: 83  GVIEKVGSEVKTLVPGDRVTLVPGDRVALEP---------GISCWRCDHCKGGRYNLCPE 133
           G I KVGS VK L  GD+V +VP    A+ P         G          G +++   +
Sbjct: 63  GQIVKVGSLVKRLKVGDKV-IVP----AITPDWGEEESQRGYPMHSGGMLGGWKFSNFKD 117
Query: 134 MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNV 193
             F     V+ + AN  + P D+  K  D V L      + ++ G H    ANI     V
Sbjct: 118 GVFSEVFHVNEADANLALLPRDI--KPEDAVML-----SDMVTTGFHGAELANIKLGDTV 170
Query: 194 LIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE 253
            ++G GP+GL+++  A   GA RI  V    +   +A E GA +I+       DI E++ 
Sbjct: 171 CVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQIL 228
Query: 254 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKV------------------CLVGMG 295
           K     G G+D      G   T + A+     G  +                    VGMG
Sbjct: 229 KATD--GKGVDKVVIAGGXVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMG 286
Query: 296 HHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 355
           H  +   LTP         G  R +        L+ +GK+D   L+THRF   +K VE+A
Sbjct: 287 HKHIHGGLTPG--------GRVRMEK----LASLISTGKLDTSKLITHRFEGLEK-VEDA 333
Query: 356 F 356
Sbjct: 334 L 334

>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa Entamoeba Histolytica Length = 360

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 151/361 (41%), Gaps = 59/361 (16%)
Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
           +LG+  +     ++P  GP D LVR  A+  C SD H +      D   +  M++GHE  
Sbjct: 6   MLGIGRIGWIEKKIPECGPLDALVRPLALAPCTSDTHTVWAGAIGD---RHDMILGHEAV 62
Query: 83  GVIEKVGSEVKTLVPGDRVTLVPGDRVALEP---------GISCWRCDHCKGGRYNLCPE 133
           G I KVGS VK L  GD+V +VP    A+ P         G          G +++   +
Sbjct: 63  GQIVKVGSLVKRLKVGDKV-IVP----AITPDWGEEESQRGYPMHSGGMLGGWKFSNFKD 117
Query: 134 MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNV 193
             F     V+ + AN  + P D+  K  D V L      + ++ G H    ANI     V
Sbjct: 118 GVFSEVFHVNEADANLALLPRDI--KPEDAVML-----SDMVTTGFHGAELANIKLGDTV 170
Query: 194 LIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE 253
            ++G GP+GL+++  A   GA RI  V    +   +A E GA +I+       DI E++ 
Sbjct: 171 CVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQIL 228
Query: 254 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKV------------------CLVGMG 295
           K     G G+D      G   T + A+     G  +                    VGMG
Sbjct: 229 KATD--GKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIPIPRSEWGVGMG 286
Query: 296 HHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 355
           H  +   LTP         G  R +        L+ +GK+D   L+THRF   +K VE+A
Sbjct: 287 HKHIHGGLTPG--------GRVRMEK----LASLISTGKLDTSKLITHRFEGLEK-VEDA 333
Query: 356 F 356
Sbjct: 334 L 334

>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 155/348 (44%), Gaps = 57/348 (16%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           E P+ GP+D +VR  AV  C SD+H   T+       +  M++GHE  G + +VGSEVK 
Sbjct: 18  EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95  LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQ 149
             PGDRV +VP    A+ P    WR    + G +     M    KF      V G   + 
Sbjct: 75  FKPGDRV-VVP----AITPD---WRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH- 125
Query: 150 VVHPADLCF-KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTML 207
            V+ AD+    LP  + LE   M  + ++ G H    A+I   ++V+++G G +GL+ + 
Sbjct: 126 -VNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIQMGSSVVVIGIGAVGLMGIA 184
Query: 208 AARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 267
            A+  GA RI+ V      +  AK  GA +I+        I ++V K+    G G+D   
Sbjct: 185 GAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGVDRVI 240
Query: 268 DCAGLNKTMSTALGATCAGGKVCLV------------------GMGHHEMTVPLTPAAVR 309
              G ++T+S A+     GG +  +                  GM H  +   L P    
Sbjct: 241 MAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPG--- 297
Query: 310 EVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 356
                G  R +      ++L+   ++D   LVTH F GF    +E+AF
Sbjct: 298 -----GRLRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 167/374 (44%), Gaps = 49/374 (13%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G   L I+  E+     ++V +++ A  +C +D   + +       +  P+++GHE
Sbjct: 16  AWEAG-KPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEG---LAFPVIVGHE 71
Query: 81  CAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP 140
            AG++E +G  V  + PGD+V       + L   + C +C  C     NLC ++    +P
Sbjct: 72  AAGIVESIGPGVTNVKPGDKV-------IPLYAPL-CRKCKFCLSPLTNLCGKISNLKSP 123
Query: 141 -------------------PVH----GSLANQVVHPADLCF-KLPDNVSLEEGAMCE-PL 175
                              PV+     S  +Q    +D+   K+ D+ +LE   +     
Sbjct: 124 ASDQQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGF 183
Query: 176 SVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG 234
           S G  A    A + P +   + G G +GL  ++  +A GA RI+ +D++  +   AK +G
Sbjct: 184 STGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALG 243
Query: 235 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCL--- 291
           A + +      + I E + ++ K    G+D + DCAG ++TM  AL  T AG   C    
Sbjct: 244 ATDCLNPRDLHKPIQEVIIELTKG---GVDFALDCAGGSETMKAALDCTTAGWGSCTFIG 300
Query: 292 VGMGHHEMTV-PLTPAAVREVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFS 348
           V  G   +TV P      R ++    G ++  ++ P  +   ++ K ++  LVTH   F 
Sbjct: 301 VAAGSKGLTVFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTLPFD 360
Query: 349 QKEVEEAFETSARG 362
           +  + EAF+   +G
Sbjct: 361 K--ISEAFDLMNQG 372

>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 162/367 (44%), Gaps = 71/367 (19%)
Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
           +LG+N L     E P  G YD +VR  AV  C SD+H +      D   ++ M++GHE  
Sbjct: 6   MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAV 62
Query: 83  GVIEKVGSEVKTLVPGDRVTL---VPGDR-VALEPG--------ISCWRCDHCKGGRYNL 130
           G + +VGSEVK   PGDRV +    P  R + ++ G        ++ W+  + K G +  
Sbjct: 63  GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFG- 121
Query: 131 CPEMKFFATPPVHGSLANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGVHACRRANIG 188
               ++F             V+ AD+    LP ++ LE   M  + ++ G H    A+I 
Sbjct: 122 ----EYFH------------VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQ 165
Query: 189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 248
             ++V+++G G +GL+ +  A+  GA RI+ V      +  AK  GA +I+        I
Sbjct: 166 MGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HI 223
Query: 249 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV---------------- 292
            ++V K+    G G+D      G ++T+S A+     GG +  +                
Sbjct: 224 VDQVMKLTN--GKGVDRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEW 281
Query: 293 --GMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQ 349
             GM H  +   L P         G  R +    +  +++   ++D+  LVTH + GF  
Sbjct: 282 GCGMAHKTIKGGLCPG--------GRLRAE----MLRDMVVYNRVDLSKLVTHVYHGFDH 329
Query: 350 KEVEEAF 356
             +EEA 
Sbjct: 330 --IEEAL 334

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 154/338 (45%), Gaps = 25/338 (7%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
           L +Q   +P      VL++++A G+C SDVH  +     LR   D  VK P+ +GHE AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84  VIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 143
            IE+VG EV        V    GD VA+ P      C +C+ G  +LC   ++       
Sbjct: 73  KIEEVGDEV--------VGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFD 123
Query: 144 GSLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGP-ETNVLIMGAGPI 201
           G+ A  V+ P     +KL    ++E   +         A R+A++ P +T +++   G +
Sbjct: 124 GAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGL 183
Query: 202 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 261
           G + +  A+A     I+ VDV +  +  AK  GAD ++  S  +QD   E+ +I ++   
Sbjct: 184 GTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES--K 239
Query: 262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 321
           G+D   D     KT+S    A    GK  +VG+   ++        + E+  VG      
Sbjct: 240 GVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQ 299
Query: 322 TWPL-CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET 358
           +  L  + L  +GK  VKP++T       +E  EA + 
Sbjct: 300 SDFLGIMRLAEAGK--VKPMITKTMKL--EEANEAIDN 333

>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 162/367 (44%), Gaps = 71/367 (19%)
Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
           +LG+N L     E P  G YD +VR  AV  C SD+H +      D   ++ M++GHE  
Sbjct: 6   MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAV 62
Query: 83  GVIEKVGSEVKTLVPGDRVTL---VPGDR-VALEPG--------ISCWRCDHCKGGRYNL 130
           G + +VGSEVK   PGDRV +    P  R + ++ G        ++ W+  + K G +  
Sbjct: 63  GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFPQHSNGMLAGWKFSNFKDGVFG- 121
Query: 131 CPEMKFFATPPVHGSLANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGVHACRRANIG 188
               ++F             V+ AD+    LP ++ LE   M  + ++ G H    A+I 
Sbjct: 122 ----EYFH------------VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQ 165
Query: 189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 248
             ++V+++G G +GL+ +  A+  GA RI+ V      +  AK  GA +I+        I
Sbjct: 166 MGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HI 223
Query: 249 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV---------------- 292
            ++V K+    G G+D      G ++T+S A+     GG +  +                
Sbjct: 224 VDQVMKLTN--GKGVDRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEW 281
Query: 293 --GMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQ 349
             GM H  +   L P         G  R +    +  +++   ++D+  LVTH + GF  
Sbjct: 282 GCGMAHKTIKGGLCPG--------GRLRAE----MLRDMVVYNRVDLSKLVTHVYHGFDH 329
Query: 350 KEVEEAF 356
             +EEA 
Sbjct: 330 --IEEAL 334

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 134/291 (46%), Gaps = 24/291 (8%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIE 86
           L I    +P  GP  V V+++A G+C +D+H        D+ VK   P + GHE  G + 
Sbjct: 15  LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAAD----GDWPVKPTLPFIPGHEGVGYVS 70
Query: 87  KVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 146
            VGS V  +  GDRV  VP    A      C  C+HC  G   LC E +      V+G  
Sbjct: 71  AVGSGVSRVKEGDRVG-VPWLYSA------CGYCEHCLQGWETLC-EKQQNTGYSVNGGY 122
Query: 147 ANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLV 204
              VV   +    LPD V   E A  +C  ++V     +  +  P   V+I G G +G V
Sbjct: 123 GEYVVADPNYVGLLPDKVGFVEIAPILCAGVTV-YKGLKVTDTRPGQWVVISGIGGLGHV 181
Query: 205 TMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 264
            +  ARA G  R+  VD+DD +L++A+ +GA+    V+ N +D  +    +QK +G G  
Sbjct: 182 AVQYARAMGL-RVAAVDIDDAKLNLARRLGAE----VAVNARD-TDPAAWLQKEIG-GAH 234
Query: 265 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 315
                A   K  S A+G    GG + L G+   +   P+    ++ + + G
Sbjct: 235 GVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRG 285

>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 155/348 (44%), Gaps = 57/348 (16%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           E P+ GP+D +VR  AV  C SD+H   T+       +  M++GHE  G + +VGSEVK 
Sbjct: 18  EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95  LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQ 149
             PGDRV +VP    A+ P    WR    + G +     M    KF      V G   + 
Sbjct: 75  FKPGDRV-VVP----AITPD---WRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH- 125
Query: 150 VVHPADLCF-KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTML 207
            V+ AD+    LP  + LE   M  + ++ G H    A+I   ++V+++G G +GL+ + 
Sbjct: 126 -VNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIA 184
Query: 208 AARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 267
            A+  GA RI+ V      +  AK  GA +I+        I ++V K+    G G+D   
Sbjct: 185 GAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGVDRVI 240
Query: 268 DCAGLNKTMSTALGATCAGGKVCLV------------------GMGHHEMTVPLTPAAVR 309
              G ++T+S A+     GG +  +                  GM H  +   L P    
Sbjct: 241 MAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPG--- 297
Query: 310 EVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 356
                G  R +      ++L+   ++D   LVTH F GF    +E+AF
Sbjct: 298 -----GRLRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 91.7 bits (226), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 154/338 (45%), Gaps = 25/338 (7%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
           L +Q   +P      VL++++A G+C SDVH  +     LR   D  VK P+ +GHE AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84  VIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 143
            IE+VG EV        V    GD VA+ P      C +C+ G  +LC   ++       
Sbjct: 73  KIEEVGDEV--------VGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFD 123
Query: 144 GSLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGP-ETNVLIMGAGPI 201
           G+ A  V+ P     +KL    ++E   +         A R+A++ P +T +++   G +
Sbjct: 124 GAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGL 183
Query: 202 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 261
           G + +  A+A     I+ VDV +  +  AK  GAD ++  S  +QD   E+ +I ++   
Sbjct: 184 GTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES--K 239
Query: 262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 321
           G+D   D     KT+S    A    GK  +VG+   ++        + E+  VG      
Sbjct: 240 GVDAVIDLNYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQ 299
Query: 322 TWPL-CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET 358
           +  L  + L  +GK  VKP++T       +E  EA + 
Sbjct: 300 SDFLGIMRLAEAGK--VKPMITKTMKL--EEANEAIDN 333

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 91.3 bits (225), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 154/338 (45%), Gaps = 25/338 (7%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
           L +Q   +P      VL++++A G+C SDVH  +     LR   D  VK P+ +GHE AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84  VIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 143
            IE+VG EV        V    GD VA+ P      C +C+ G  +LC   ++       
Sbjct: 73  KIEEVGDEV--------VGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWLGI-NFD 123
Query: 144 GSLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGP-ETNVLIMGAGPI 201
           G+ A  V+ P     +KL    ++E   +         A R+A++ P +T +++   G +
Sbjct: 124 GAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGL 183
Query: 202 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 261
           G + +  A+A     I+ VDV +  +  AK  GAD ++  S  +QD   E+ +I ++   
Sbjct: 184 GTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES--K 239
Query: 262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 321
           G+D   D     KT+S    A    GK  +VG+   ++        + E+  VG      
Sbjct: 240 GVDAVIDLNYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQ 299
Query: 322 TWPL-CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET 358
           +  L  + L  +GK  VKP++T       +E  EA + 
Sbjct: 300 SDFLGIMRLAEAGK--VKPMITKTMKL--EEANEAIDN 333

>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 161/367 (43%), Gaps = 71/367 (19%)
Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
           +LG+N L     E P  G YD +VR  AV  C SD+H +      D   ++ M++GHE  
Sbjct: 6   MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAV 62
Query: 83  GVIEKVGSEVKTLVPGDRVTL---VPGDR-VALEPG--------ISCWRCDHCKGGRYNL 130
           G + +VGSEVK   PGDRV +    P  R + ++ G        ++ W+  + K G +  
Sbjct: 63  GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFG- 121
Query: 131 CPEMKFFATPPVHGSLANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGVHACRRANIG 188
               ++F             V+ AD+    LP ++ LE   M  + ++ G H    A+I 
Sbjct: 122 ----EYFH------------VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIE 165
Query: 189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 248
             ++V+++G G +GL+ +  A+  GA RI+ V      +  AK  GA +I+        I
Sbjct: 166 MGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HI 223
Query: 249 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV---------------- 292
            ++V K+    G G+D      G ++T+S A+     GG +  +                
Sbjct: 224 EDQVMKLTN--GKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEW 281
Query: 293 --GMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQ 349
             GM H  +   L P         G  R +       +++   ++D+  LVTH + GF  
Sbjct: 282 GCGMAHKTIKGGLCPG--------GRLRAER----LRDMVVYNRVDLSKLVTHVYHGFDH 329
Query: 350 KEVEEAF 356
             +EEA 
Sbjct: 330 --IEEAL 334

>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 128/274 (46%), Gaps = 21/274 (7%)
Query: 29  LKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
           L+I+  + P L G +DV+VR+   G+C +D+H ++ +       K P  +GHE  G IE+
Sbjct: 28  LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEE 87
Query: 88  VGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 147
           V   V+ L  GD V         L P ++   C  C+ G    C  ++F     + G  A
Sbjct: 88  VAEGVEGLEKGDPVI--------LHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFA 138
Query: 148 NQVVHPADLCFKLPDNVSLEEGAMCEPLS-VGVHACRRA-----NIGPETNVLIMGAGPI 201
             +        KLP ++S E+     PL+  G+ A R        + P   V I+G G +
Sbjct: 139 EFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGL 198
Query: 202 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 261
           G + +   +      ++ +DV + +L +A+ +GAD++V      +D  ++V ++ +  G 
Sbjct: 199 GHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR---RDPVKQVMELTR--GR 253
Query: 262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG 295
           G++V+ D  G   T+          G++ +VG G
Sbjct: 254 GVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG 287

>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From Thermotoga Maritima Length = 404

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 104/212 (49%), Gaps = 16/212 (7%)
Query: 41  PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE----PMVIGHECAGVIEKVGSEVKTLV 96
           P ++++++KA GICGSDVH  +T      +       P+ +GHE +GV+ + G E     
Sbjct: 55  PTEIIIKVKACGICGSDVHXAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRR 114
Query: 97  PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 156
              R  +  G+ V  E  + C  C  C  G  N C  +       V G+ A  V   A  
Sbjct: 115 TNKRFEI--GEPVCAEEXLWCGHCRPCAEGFPNHCENLNELGFN-VDGAFAEYVKVDAKY 171
Query: 157 CFKLPDNVSLEEG-------AMCEPLSVGVHAC--RRANIGPETNVLIMGAGPIGLVTML 207
            + L +   + EG       ++ EP SV  +A   R   I P  NV+I+G GPIGL  + 
Sbjct: 172 AWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVA 231
Query: 208 AARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 239
             +  GA ++++ +  + R ++AKE+GAD+++
Sbjct: 232 ILKHAGASKVILSEPSEVRRNLAKELGADHVI 263

>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347

Iteration: 1
 Score = 87.8 bits (216), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 152/338 (44%), Gaps = 28/338 (8%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
           L +Q   +P      VL++++A G+C SDVH  +     LR   D  VK P+ +GHE AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84  VIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 143
            IE+VG EV        V    GD VA+ P      C +C+ G  +LC   ++       
Sbjct: 73  KIEEVGDEV--------VGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFD 123
Query: 144 GSLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGP-ETNVLIMGAGPI 201
           G+ A  V+ P     +KL    ++E   +         A R+A++ P +T +++   G +
Sbjct: 124 GAYAEYVIVPHYKYXYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGL 183
Query: 202 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 261
           G   +  A+A     I+ VDV +  +  AK  GAD ++  S  +QD   E+ +I ++   
Sbjct: 184 GTXAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES--K 239
Query: 262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 321
           G+D   D     KT+S    A    GK   VG+   ++        + E+  VG      
Sbjct: 240 GVDAVIDLNNSEKTLSVYPKALAKQGKYVXVGLFGADLHYHAPLITLSEIQFVGSLVGNQ 299
Query: 322 TWPLCL-ELLRSGKIDVKPLVTHRFGFSQKEVEEAFET 358
           +  L +  L  +GK  VKP +T        ++EEA E 
Sbjct: 300 SDFLGIXRLAEAGK--VKPXIT-----KTXKLEEANEA 330

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 123/282 (43%), Gaps = 56/282 (19%)
Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVT 102
           +VLV++ A G+C +D+     +R   + V  P V+GHE +G+IE +G  V  L  GD V 
Sbjct: 33  EVLVKVVATGMCHTDL----IVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVV 88
Query: 103 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEM--------------------------KF 136
           L  G          C +C  C  G    C E                            F
Sbjct: 89  LSYG---------YCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHF 139
Query: 137 FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH----ACRRA-NIGPET 191
           FA      S A   +   +   K+  +V +E   +  PL  G+     AC  A  + P +
Sbjct: 140 FA----QSSFATYALSRENNTVKVTKDVPIE---LLGPLGCGIQTGAGACINALKVTPAS 192
Query: 192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE 251
           + +  GAG +GL  +LAA+  GA  I+ VD+ + RL +AK++GA +++   T      + 
Sbjct: 193 SFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQ-----DP 247
Query: 252 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG 293
           V  I++    G++ + +  G  + +   + A    GK+ +VG
Sbjct: 248 VAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVG 289

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 147/377 (38%), Gaps = 59/377 (15%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G   L I+  E+     ++V +++ A  +C +D +   TL  AD     P+++GHE
Sbjct: 13  AWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHE 68
Query: 81  CAGVIEKVGSEVKTLVPGDRVT--LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA 138
            AG++E VG  V  L  GD V    +P           C  C  C   + NLC +++   
Sbjct: 69  GAGIVESVGEGVTKLKAGDTVIPLYIP----------QCGECKFCLNPKTNLCQKIRVTQ 118
Query: 139 TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV-----------------GVH- 180
              +     ++               +  E  +   +SV                 G+  
Sbjct: 119 GKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGIST 178
Query: 181 ----ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD 236
               A   A + P +   + G G +GL  ++  +  GA RI+ VD++  + + AKE GA 
Sbjct: 179 GYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT 238
Query: 237 NIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG 295
             +    N QD ++ ++++   M   G+D SF+C G  K M  AL A   G         
Sbjct: 239 ECI----NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSV 290
Query: 296 HHEMTVPLTPAAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRF 345
              +       A R   +V    +K T    W      P  +    S KI V   VTH  
Sbjct: 291 VVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNL 350
Query: 346 GFSQKEVEEAFETSARG 362
            F   E+ +AFE    G
Sbjct: 351 SFD--EINKAFELMHSG 365

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 147/377 (38%), Gaps = 59/377 (15%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G   L I+  E+     ++V +++ A  +C +D +   TL  AD     P+++GHE
Sbjct: 13  AWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHE 68
Query: 81  CAGVIEKVGSEVKTLVPGDRVT--LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA 138
            AG++E VG  V  L  GD V    +P           C  C  C   + NLC +++   
Sbjct: 69  GAGIVESVGEGVTKLKAGDTVIPLYIP----------QCGECKFCLNPKTNLCQKIRVTQ 118
Query: 139 TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV-----------------GVH- 180
              +     ++               +  E  +   +SV                 G+  
Sbjct: 119 GKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGIST 178
Query: 181 ----ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD 236
               A   A + P +   + G G +GL  ++  +  GA RI+ VD++  + + AKE GA 
Sbjct: 179 GYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT 238
Query: 237 NIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG 295
             +    N QD ++ ++++   M   G+D SF+C G  K M  AL A   G         
Sbjct: 239 ECI----NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSV 290
Query: 296 HHEMTVPLTPAAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRF 345
              +       A R   +V    +K T    W      P  +    S KI V   VTH  
Sbjct: 291 VVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNL 350
Query: 346 GFSQKEVEEAFETSARG 362
            F   E+ +AFE    G
Sbjct: 351 SFD--EINKAFELMHSG 365

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 147/377 (38%), Gaps = 59/377 (15%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G   L I+  E+     ++V +++ A  +C +D +   TL  AD     P+++GHE
Sbjct: 12  AWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHE 67
Query: 81  CAGVIEKVGSEVKTLVPGDRVT--LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA 138
            AG++E VG  V  L  GD V    +P           C  C  C   + NLC +++   
Sbjct: 68  GAGIVESVGEGVTKLKAGDTVIPLYIP----------QCGECKFCLNPKTNLCQKIRVTQ 117
Query: 139 TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV-----------------GVH- 180
              +     ++               +  E  +   +SV                 G+  
Sbjct: 118 GKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGIST 177
Query: 181 ----ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD 236
               A   A + P +   + G G +GL  ++  +  GA RI+ VD++  + + AKE GA 
Sbjct: 178 GYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT 237
Query: 237 NIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG 295
             +    N QD ++ ++++   M   G+D SF+C G  K M  AL A   G         
Sbjct: 238 ECI----NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSV 289
Query: 296 HHEMTVPLTPAAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRF 345
              +       A R   +V    +K T    W      P  +    S KI V   VTH  
Sbjct: 290 VVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNL 349
Query: 346 GFSQKEVEEAFETSARG 362
            F   E+ +AFE    G
Sbjct: 350 SFD--EINKAFELMHSG 364

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 150/359 (41%), Gaps = 51/359 (14%)
Query: 42  YDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV 101
           ++V +++ A GICGSD   LK +  + F    P+++GHE  GV+E +G+ V  + PGD+V
Sbjct: 35  HEVRIKILASGICGSDSSVLKEIIPSKF----PVILGHEAVGVVESIGAGVTCVKPGDKV 90
Query: 102 T--LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFK 159
               VP           C  C  CK    N C +    A   +   + ++        + 
Sbjct: 91  IPLFVP----------QCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYN 140
Query: 160 LPDNVSLEEGAMCEPLSVG-------VHAC--------------RRANIGPETNVLIMGA 198
           L    +  E  +   ++V        + +C                A + P +   + G 
Sbjct: 141 LMGTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL 200
Query: 199 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV-EKIQK 257
           G +G   ++  +A GA RI+ V     +   A E+GA   +    N +D  + + E I +
Sbjct: 201 GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECL----NPKDYDKPIYEVICE 256
Query: 258 AMGTGIDVSFDCAGLNKTMSTALGAT-CAGGKVCLVGMG---HHEMTVPLTPAAVREV-- 311
               G+D + +CAG  +TM  AL +T C  G   ++G+          PL     R +  
Sbjct: 257 KTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKG 316
Query: 312 DVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 370
            V G F+ +    L  + ++  KI+V  LV+ +    Q  + +AFE  + G     +M 
Sbjct: 317 SVFGGFKGEEVSRLVDDYMKK-KINVNFLVSTKLTLDQ--INKAFELLSSGQGVRSIMI 372

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score = 81.3 bits (199), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 143/346 (41%), Gaps = 49/346 (14%)
Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVT 102
           +V +++    +C +D +   T    D     P ++GHE AG++E VG  V  +  GD V 
Sbjct: 35  EVRIKILYTALCHTDAY---TWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAGDHV- 90
Query: 103 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF--------------FAT--PPVHGSL 146
            +P  +        C  C  CK G+ NLC +++               F+    P++  +
Sbjct: 91  -IPCYQA------ECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFM 143
Query: 147 ANQ------VVHPADLCFKLPDNVSLEEGAMCE---PLSVGVHACRRANIGPETNVLIMG 197
                    VVH   +  K+     L++  +     P  +G      A + P +NV I G
Sbjct: 144 GTSTFSQYTVVHDVSVA-KIDPTAPLDKVCLLGCGVPTGLGA-VWNTAKVEPGSNVAIFG 201
Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 257
            G +GL     A+  GA RI+ +D+D  +   AK+ G +  V    + + I E +  +  
Sbjct: 202 LGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTD 261
Query: 258 AMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGM---GHHEMTVP--LTPAAVREV 311
               G+D SF+C G    M  AL     G G   +VG+   G    T P  L    V + 
Sbjct: 262 G---GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKG 318
Query: 312 DVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 357
              G F+ +   P  +E   + +I V   +TH       E+ +AF+
Sbjct: 319 TAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLG--EINKAFD 362

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 146/377 (38%), Gaps = 59/377 (15%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G   L I+  E+     ++V +++ A  +C +D +   TL  AD     P+++GH 
Sbjct: 12  AWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHL 67
Query: 81  CAGVIEKVGSEVKTLVPGDRVT--LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA 138
            AG++E VG  V  L  GD V    +P           C  C  C   + NLC +++   
Sbjct: 68  GAGIVESVGEGVTKLKAGDTVIPLYIP----------QCGECKFCLNPKTNLCQKIRVTQ 117
Query: 139 TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV-----------------GVH- 180
              +     ++               +  E  +   +SV                 G+  
Sbjct: 118 GKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGIST 177
Query: 181 ----ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD 236
               A   A + P +   + G G +GL  ++  +  GA RI+ VD++  + + AKE GA 
Sbjct: 178 GYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT 237
Query: 237 NIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG 295
             +    N QD ++ ++++   M   G+D SF+C G  K M  AL A   G         
Sbjct: 238 ECI----NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSV 289
Query: 296 HHEMTVPLTPAAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRF 345
              +       A R   +V    +K T    W      P  +    S KI V   VTH  
Sbjct: 290 VVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNL 349
Query: 346 GFSQKEVEEAFETSARG 362
            F   E+ +AFE    G
Sbjct: 350 SFD--EINKAFELMHSG 364

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 143/343 (41%), Gaps = 41/343 (11%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  E+      ++ +++ A G+C +D+++L   +  D     P+V+GHE AG++E V
Sbjct: 21  LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGF---PVVLGHEGAGIVESV 77
Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 148
           G  V    PG++V  +   +        C  C  C+  + N C +     +P V      
Sbjct: 78  GPGVTEFQPGEKVIPLFISQ--------CGECRFCQSPKTNQCVKGWANESPDVMSPKET 129
Query: 149 QVVHPADLCFKLPDNVSLEEGAMCEPLSV-----------------GVH-----ACRRAN 186
           +         +     +  +  +   ++V                 GV      A   A 
Sbjct: 130 RFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAK 189
Query: 187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ 246
           + P +   + G G +GL  ++   + GA RI+ VD++  +   AK  GA + V  + + +
Sbjct: 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSE 249
Query: 247 DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMG--HHEMTVPL 303
            I++ + K+      G+D S +C G    M  AL +   G G   LVG    H   T P+
Sbjct: 250 PISQVLSKMTNG---GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPI 306
Query: 304 TPAAVR--EVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHR 344
              A R  +  + G F+ K+  P  ++     K+ +   +THR
Sbjct: 307 QLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHR 349

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 147/359 (40%), Gaps = 50/359 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+      +V +++ A GIC +D H +K       V K P+++GHE  G++E +
Sbjct: 21  FSIEEIEVAPPKTKEVRIKILATGICRTDDHVIK----GTMVSKFPVIVGHEATGIVESI 76
Query: 89  GSEVKTLVPGDRVT--LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT------- 139
           G  V T+ PGD+V    +P           C  C+ C+    NLC               
Sbjct: 77  GEGVTTVKPGDKVIPLFLP----------QCRECNACRNPDGNLCIRSDITGRGVLADGT 126
Query: 140 -------PPVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGV-HACRRA 185
                   PVH      +     V       K+ D    E+  +     S G   A +  
Sbjct: 127 TRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTG 186
Query: 186 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL 245
            + P +  ++ G G +GL  ++  ++ GA RI+ +D++  +   A  +GA   +    + 
Sbjct: 187 KVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDST 246
Query: 246 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHEMTVPL 303
           + I+E + ++    G  +  +F+  G  +TM  AL A+C    G   +VG+      +  
Sbjct: 247 KPISEVLSEMT---GNNVGYTFEVIGHLETMIDAL-ASCHMNYGTSVVVGVPPSAKMLTY 302
Query: 304 TPAAVREVD-----VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 357
            P  +         V G  + ++  P  +    + K D+  L+TH   F  K++ E FE
Sbjct: 303 DPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPF--KKISEGFE 359

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 147/359 (40%), Gaps = 50/359 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+      +V +++ A GIC +D H +K       V K P+++GHE  G++E +
Sbjct: 21  FSIEEIEVAPPKTKEVRIKILATGICRTDDHVIK----GTMVSKFPVIVGHEATGIVESI 76
Query: 89  GSEVKTLVPGDRVT--LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT------- 139
           G  V T+ PGD+V    +P           C  C+ C+    NLC               
Sbjct: 77  GEGVTTVKPGDKVIPLFLP----------QCRECNACRNPDGNLCIRSDITGRGVLADGT 126
Query: 140 -------PPVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGV-HACRRA 185
                   PVH      +     V       K+ D    E+  +     S G   A +  
Sbjct: 127 TRFTCKGKPVHHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTG 186
Query: 186 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL 245
            + P +  ++ G G +GL  ++  ++ GA RI+ +D++  +   A  +GA   +    + 
Sbjct: 187 KVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDST 246
Query: 246 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHEMTVPL 303
           + I+E + ++    G  +  +F+  G  +TM  AL A+C    G   +VG+      +  
Sbjct: 247 KPISEVLSEMT---GNNVGYTFEVIGHLETMIDAL-ASCHMNYGTSVVVGVPPSAKMLTY 302
Query: 304 TPAAVREVD-----VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 357
            P  +         V G  + ++  P  +    + K D+  L+TH   F  K++ E FE
Sbjct: 303 DPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPF--KKISEGFE 359

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score = 78.6 bits (192), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 149/361 (41%), Gaps = 50/361 (13%)
Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVT 102
           +V V++    +C +D +   T    D     P V+GHE AG++E VG  V  + PGD V 
Sbjct: 53  EVRVKVLYTALCHTDAY---TWSGKDPEGLFPCVLGHEAAGIVESVGEGVTEVQPGDHV- 108
Query: 103 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK----------------FFATPPVHGSL 146
            +P  +        C  C  CK G+ NLC +++                     P++  +
Sbjct: 109 -IPCYQA------ECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFM 161
Query: 147 ANQ------VVHPADLCFKLPDNVSLEEGAMCE---PLSVGVHACRRANIGPETNVLIMG 197
                    VVH   +  K+     LE+  +     P  +G      A + P + V + G
Sbjct: 162 GTSTFSQYTVVHDVSVA-KIDPVAPLEKVCLLGCGVPTGLGA-VWNTAKVEPGSIVAVFG 219
Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 257
            G +GL     A+A GA RI+ +D+D  +   AK  G    +    + Q I + +  +  
Sbjct: 220 LGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVTEFINPKEHEQPIQQVIVDLTD 279
Query: 258 AMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGM---GHHEMTVP--LTPAAVREV 311
               G+D SF+C G    M +AL     G G   +VG+   G    T P  L    V + 
Sbjct: 280 G---GVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKG 336
Query: 312 DVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 371
              G F+ ++  P  ++     +I V   +TH    +  ++ +AF+     G  ++V+ +
Sbjct: 337 TAFGGFKSRSQVPSLVDKYLKKEIKVDEYITHNMTLA--DINKAFDL-MHDGDCLRVVLD 393
Query: 372 L 372
           +
Sbjct: 394 M 394

>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ Length = 366

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 135/312 (43%), Gaps = 32/312 (10%)
Query: 2   GKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELP--SLGPYDVLVRMKAVGICGSDVH 59
           G  GMS+  +E+   V    W     +  + PF     + G  DV  ++   G+C SD+H
Sbjct: 1   GSHGMSKSPEEE-HPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLH 59
Query: 60  YLKTLRCADF-VVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCW 118
            +K     D+     P+V GHE  G + +VGS+VK +  GD+V +  G  V      +C 
Sbjct: 60  SIKN----DWGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGV--GCLVG-----ACH 108
Query: 119 RCDHCKGGRYNLCPEMKFFATPPVH------GSLANQVVHPADLCFKLPDNVSLEEGA-- 170
            C+ C     N CP+M        H      G  +N +V       + PDN+ L+ GA  
Sbjct: 109 SCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPL 168
Query: 171 MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA 230
           +C  ++V           P  ++ I+G G +G V +  A+AFG+   VI      +    
Sbjct: 169 LCAGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEAL 228
Query: 231 KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVC 290
           K  GAD+ +        ++ + E++Q A GT +D   D       +    G   + GK+ 
Sbjct: 229 KNFGADSFL--------VSRDQEQMQAAAGT-LDGIIDTVSAVHPLLPLFGLLKSHGKLI 279
Query: 291 LVGMGHHEMTVP 302
           LVG     + +P
Sbjct: 280 LVGAPEKPLELP 291

>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase Length = 398

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 139/315 (44%), Gaps = 55/315 (17%)
Query: 18  NMAAWLLGVNTLKIQPFELPSLG------PYDVLVRMKAVGICGSDVHYLKTLRCADFVV 71
           N +    G   L+++    P L        + V++++ +  ICGSD H  +      F+V
Sbjct: 3   NKSVVYHGTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYR----GRFIV 58
Query: 72  KEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLC 131
            +  V+GHE  G + + GS+V+ +  GD V+ VP +       ++C RC +CK  R ++C
Sbjct: 59  PKGHVLGHEITGEVVEKGSDVELMDIGDLVS-VPFN-------VACGRCRNCKEARSDVC 110
Query: 132 ------PEMKF----FATPPVHGSLANQVVHP-AD-LCFKLPDNVSLEEGA-----MCEP 174
                 P+       F      G  A  V+ P AD +  K  D     E       + + 
Sbjct: 111 ENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDI 170
Query: 175 LSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG 234
           L  G H C  A + P ++V I GAGP+G      AR  GA  +++ D +  RL +  + G
Sbjct: 171 LPTGFHGCVSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAG 230
Query: 235 ADNIVKVSTNLQDIAEEVEKIQKAMGT-----GID-VSFDCAGL---------NKTMSTA 279
            + I     +L++ A   ++I + +G      G+D V F+  GL         N  +++ 
Sbjct: 231 FETI-----DLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSL 285
Query: 280 LGATCAGGKVCLVGM 294
                AGG + + G+
Sbjct: 286 FDVVRAGGAIGIPGI 300

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 144/344 (41%), Gaps = 36/344 (10%)
Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
           + LK+    +P  G +D++VR  AV +   D   L+T    D     P V   + +GV+E
Sbjct: 39  HDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAF--PFVPASDXSGVVE 96
Query: 87  KVGSEVKTLVPGDRV--TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
            VG  V    PGDRV  T  PG    L PG          GG +               G
Sbjct: 97  AVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHP--------------G 142
Query: 145 SLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGPETNVLIMGAGPIG 202
            L+  VV P       P ++   E +   C  L+       + ++     V++ G G + 
Sbjct: 143 VLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVA 202
Query: 203 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT- 261
           L  +  A+A GA  +++      +L  A  +GAD+ +     L++  + VE++    G  
Sbjct: 203 LFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGIN---RLEE--DWVERVYALTGDR 256
Query: 262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVFRYK 320
           G D   + AG    +  +L A    G++ ++G +   E++ P+ P  ++   V G+    
Sbjct: 257 GADHILEIAG-GAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGH 315
Query: 321 NTWPLCLELLRSG--KIDVKPLVTHRFGFSQKEVEEAFETSARG 362
                 LE L     ++ +KP++  R+ F+  EV EA     RG
Sbjct: 316 RR---ALEDLVGAVDRLGLKPVIDXRYKFT--EVPEALAHLDRG 354

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 131/320 (40%), Gaps = 26/320 (8%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+   +P     +VL+R+   G+C +D+   K +  A    + P+++GHE AG I +V
Sbjct: 16  LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVE-AKQGFRLPIILGHENAGTIVEV 74
Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 148
           G   K         +  GD V +        C +C+ G++N+C            G    
Sbjct: 75  GELAK---------VKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEY 125
Query: 149 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRA----NIGPETNVLIMGAGPIGLV 204
            +V  +    KL     +E   + +  +  + A R+A    +   E  V++ G G + + 
Sbjct: 126 MLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVY 185
Query: 205 TMLAARAFGAPRIVIVDVDDYR--LSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 262
           T+   +A     I IV +   +     A E+GAD +    + ++D    + K+   +G  
Sbjct: 186 TIQILKAL-MKNITIVGISRSKKHRDFALELGADYV----SEMKDAESLINKLTDGLGAS 240
Query: 263 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV-FRYKN 321
           I  + D  G  +T           G + LVGM    +++     AV    ++G  +   N
Sbjct: 241 I--AIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLN 298
Query: 322 TWPLCLELLRSGKIDVKPLV 341
                + L  SGKI  KP +
Sbjct: 299 DLEDVVRLSESGKI--KPYI 316

>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase Length = 398

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 35/240 (14%)
Query: 18  NMAAWLLGVNTLKIQPFELPSLG-------PYDVLVRMKAVGICGSDVHYLKTLRCADFV 70
           N     LG   +++Q  + P +         + V++++ +  ICGSD H ++    A   
Sbjct: 3   NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQV- 61
Query: 71  VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNL 130
               +V+GHE  G + + G +V+ L  GD V+ VP +       ++C RC  CK     +
Sbjct: 62  ---GLVLGHEITGEVIEKGRDVENLQIGDLVS-VPFN-------VACGRCRSCKEMHTGV 110
Query: 131 CPEMK---------FFATPPVHGSLANQVVHP-ADL-CFKLPDNVSLEEG-----AMCEP 174
           C  +          +       G  A  V+ P AD    KLPD     E       + + 
Sbjct: 111 CLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDI 170
Query: 175 LSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG 234
           L  G H    A +GP + V + GAGP+GL    +AR  GA  +++ D++  RL+ AK  G
Sbjct: 171 LPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQG 230

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 106/239 (44%), Gaps = 45/239 (18%)
Query: 38  SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97
           S GP  V +R  A+G+   D ++   +     V + P+V+G E A V+E+VG  V     
Sbjct: 25  SPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTV 84
Query: 98  GDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLC 157
           G+RV              +C                      PP+ G+ + + ++PA+  
Sbjct: 85  GERVC-------------TC---------------------LPPL-GAYSQERLYPAEKL 109
Query: 158 FKLPDNVSLEE----GAMCEPLSVGVHACRRANIGPETNVLI-MGAGPIGLVTMLAARAF 212
            K+P ++ L++    G M + ++      +   + P   VLI   AG +G + +  AR  
Sbjct: 110 IKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHL 169
Query: 213 GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 271
           GA  I  V  ++ +   A+++G  + +  ST  QD AE V +I    G G+DV +D  G
Sbjct: 170 GATVIGTVSTEE-KAETARKLGCHHTINYST--QDFAEVVREITG--GKGVDVVYDSIG 223

>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 108/250 (43%), Gaps = 31/250 (12%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE---PMVIGHECAGVI 85
            K   F   ++GP DVL+ +   GIC SD+H       A    KE   PM+ GHE AG+I
Sbjct: 17  FKPHDFSRHAVGPRDVLIDILYAGICHSDIH------SAYSEWKEGIYPMIPGHEIAGII 70
Query: 86  EKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM--------KFF 137
           ++VG  VK    GD V +  G  V      SC  C  CK  +   C ++         F 
Sbjct: 71  KEVGKGVKKFKIGDVVGV--GCFVN-----SCKACKPCKEHQEQFCTKVVFTYDCLDSFH 123
Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLI 195
              P  G  +N +V   +    +  N  LE+ A  +C  ++      + + +   T V +
Sbjct: 124 DNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITT-YSPLKFSKVTKGTKVGV 182
Query: 196 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 255
            G G +G + +  A A GA  + +   ++++   A  +G  +     T+ +   EE++ I
Sbjct: 183 AGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY---TDPKQCKEELDFI 238
Query: 256 QKAMGTGIDV 265
              + T  D+
Sbjct: 239 ISTIPTHYDL 248

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/338 (22%), Positives = 132/338 (39%), Gaps = 68/338 (20%)
Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKT-LRCADFVVKEPMVIGHECAG 83
           G + +K + + +PS+   ++L++ K  G     V+Y+++  R   +  ++P V+G E +G
Sbjct: 19  GYDVIKYEDYPVPSISEEELLIKNKYTG-----VNYIESYFRKGIYPCEKPYVLGREASG 73
Query: 84  VIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 143
            +   G  V     GD+V  +     A    IS                     +  PV 
Sbjct: 74  TVVAKGKGVTNFEVGDQVAYISNSTFAQYSKIS---------------------SQGPV- 111
Query: 144 GSLANQVVHPADLCFKLPDNVSLEE-----GAMCEPLSVGVHACRRANIGPETNVLIMGA 198
                          KLP   S EE       + + L+         ++     VL+  A
Sbjct: 112 --------------MKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAA 157
Query: 199 -GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 257
            G +GL+     +  GA  I +   D+ +L +AKE GA+ ++  S   +DI  +V K   
Sbjct: 158 AGGVGLILNQLLKMKGAHTIAVASTDE-KLKIAKEYGAEYLINASK--EDILRQVLKFTN 214
Query: 258 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP------LTPAAVREV 311
             G G+D SFD  G + T   +L A    G    V  G+    +P      L+P  +  V
Sbjct: 215 --GKGVDASFDSVGKD-TFEISLAALKRKG--VFVSFGNASGLIPPFSITRLSPKNITLV 269
Query: 312 --DVVGVFRYKNTWPLCLE----LLRSGKIDVKPLVTH 343
              + G       W    +    L+ S K+++K   T+
Sbjct: 270 RPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKIYKTY 307

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 112/272 (41%), Gaps = 47/272 (17%)
Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G   L+   FE  + GP  V+VR KA+G+   D +Y   L  A F+   P  +G E AGV
Sbjct: 12  GPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFL---PSGLGAEGAGV 68
Query: 85  IEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
           +E VG EV     GDRV                                   + T P+ G
Sbjct: 69  VEAVGDEVTRFKVGDRVA----------------------------------YGTGPL-G 93
Query: 145 SLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLI-MGAGPI 201
           + +   V P     KL D+VS E+ A  M + L+V     +   + P   +L    AG +
Sbjct: 94  AYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGV 153
Query: 202 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 261
           G +    A+A GA  I  V   + + + AK +GA   +  S   +D+A+ V ++    G 
Sbjct: 154 GSLACQWAKALGAKLIGTVSSPE-KAAHAKALGAWETIDYSH--EDVAKRVLELTD--GK 208
Query: 262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVG 293
              V +D  G   T  T+L +    G V   G
Sbjct: 209 KCPVVYDGVG-QDTWLTSLDSVAPRGLVVSFG 239

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 116/274 (42%), Gaps = 29/274 (10%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV--VKEPMVIGHECAGVIE 86
           L+ +   +P     ++L+ +K  G+C +D+H        D+   VK P+V GHE AGV+ 
Sbjct: 18  LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWH----GDWPLPVKLPLVGGHEGAGVVV 73
Query: 87  KVGSEVKTLVPGDR--VTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
            +G  VK    GD   +  + G         SC  C++C+ G  + CP           G
Sbjct: 74  GMGENVKGWKIGDYAGIKWLNG---------SCMACEYCELGNESNCPHADLSGYTH-DG 123
Query: 145 SLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMG-AGPI 201
           S        A     +P    L + A  +C  ++V   A + AN+     V I G AG +
Sbjct: 124 SFQQYATADAVQAAHIPQGTDLAQVAPILCAGITV-YKALKSANLMAGHWVAISGAAGGL 182
Query: 202 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 261
           G + +  A+A G  R++ +D  + +  + + IG +  +   T  +DI   V K       
Sbjct: 183 GSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVFIDF-TKEKDIVGAVLKATDGGAH 240
Query: 262 G-IDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 294
           G I+VS   A +  +         A G   LVGM
Sbjct: 241 GVINVSVSEAAIEASTRYVR----ANGTTVLVGM 270

>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae Length = 360

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 117/286 (40%), Gaps = 37/286 (12%)
Query: 42  YDVLVRMKAVGICGSDVHYLKTLRCAD---FVVKEPMVIGHECAGVIEKVGSEVKTLVPG 98
           +D+ ++++A G+CGSD+H      CA      +K P+V+GHE  G + K+G       P 
Sbjct: 34  HDIDIKIEACGVCGSDIH------CAAGHWGNMKMPLVVGHEIVGKVVKLG-------PK 80
Query: 99  DRVTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPV------HGSLANQVV 151
               L  G RV +   + SC  CD CK      C +     + P        G  AN V 
Sbjct: 81  SNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVR 140
Query: 152 HPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAA 209
                   +P+N+     A  +C  L+V      R   GP   V I+G G IG +  L +
Sbjct: 141 VHEHFVVPIPENIPSHLAAPLLCGGLTV-YSPLVRNGCGPGKKVGIVGLGGIGSMGTLIS 199
Query: 210 RAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 269
           +A GA   VI      R    K +GAD+ +          EE +  +K   T  D+   C
Sbjct: 200 KAMGAETYVISRSSRKREDAMK-MGADHYIAT-------LEEGDWGEKYFDT-FDLIVVC 250
Query: 270 AG--LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDV 313
           A    +   +    A   GG++  + +      + L P  ++ V +
Sbjct: 251 ASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSI 296

>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol Dehydrogenase-Like Protein Yahk Length = 369

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 99/233 (42%), Gaps = 25/233 (10%)
Query: 40  GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99
           GP DV + +   G+C SD+H +++          P V GHE  G +  VG +V+   PGD
Sbjct: 46  GPNDVKIEIAYCGVCHSDLHQVRSEWAGTVY---PCVPGHEIVGRVVAVGDQVEKYAPGD 102
Query: 100 RVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK-FFATP----PVH--GSLANQVVH 152
            V +  G  V      SC  C+ C+ G  N C  M   + +P    P H  G  + Q+V 
Sbjct: 103 LVGV--GCIVD-----SCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVV 155
Query: 153 PADLCFKLPDNVSLEEGAMCEPLSVG----VHACRRANIGPETNVLIMGAGPIGLVTMLA 208
                 ++      E+ A   PL           R    GP   V ++G G +G + +  
Sbjct: 156 HERYVLRI--RHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKL 213
Query: 209 ARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 261
           A A GA  +V     + +   AK +GAD +V  S N  ++A  ++     + T
Sbjct: 214 AHAMGA-HVVAFTTSEAKREAAKALGADEVVN-SRNADEMAAHLKSFDFILNT 264

>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From Staphylococcus Haemolyticus Length = 346

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 52/221 (23%)
Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
           N  K    ++P    +++LV+++++ +   D       R  D V K P V+G +  GV+E
Sbjct: 18  NLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQ----RLMD-VSKAPRVLGFDAIGVVE 72
Query: 87  KVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 146
            VG+EV     GD V                                  +  +P  +GS 
Sbjct: 73  SVGNEVTMFNQGDIVY---------------------------------YSGSPDQNGSN 99
Query: 147 ANQVVHPADLCFKLPDNVSLEEGAMCEPLS-----------VGVHACRRANIGPETNVLI 195
           A   +    L  K P N+S E+ A+  PL+            G+   R  N G +T ++I
Sbjct: 100 AEYQLINERLVAKAPKNISAEQ-AVSLPLTGITAYETLFDVFGISRNRNENEG-KTLLII 157
Query: 196 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD 236
            GAG +G +    A+A+G  R++     +  +   K++GAD
Sbjct: 158 NGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGAD 197

>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily Protein (np_718042.1) From Shewanella Oneidensis At 1.55 A Resolution Length = 315

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 74/188 (39%), Gaps = 37/188 (19%)
Query: 15  EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP 74
           E+  + A+    +++ +   ++P+L   D+LV+ +A+GI   D  ++K            
Sbjct: 3   EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIK---ANPINWSNG 59
Query: 75  MVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM 134
            V G + AGVI KVG++V +   G RV                    H    R       
Sbjct: 60  HVPGVDGAGVIVKVGAKVDSKXLGRRVAY------------------HTSLKR------- 94
Query: 135 KFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACRRANIGPETNV 193
                   HGS A   V   D    LPDN+S E  A    PL     A  +  +  +  V
Sbjct: 95  --------HGSFAEFTVLNTDRVXTLPDNLSFERAAALPCPLLTAWQAFEKIPLTKQREV 146
Query: 194 LIMGAGPI 201
           LI+G G +
Sbjct: 147 LIVGFGAV 154

>pdb|2B5W|A Chain A, Crystal Structure Of D38c Glucose Dehydrogenase Mutant From Haloferax Mediterranei Length = 357

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 113/265 (42%), Gaps = 30/265 (11%)
Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVT 102
           + LVR   VG+CG+D   +          ++ +V+GHE  GV+  V      L  GD V 
Sbjct: 27  EALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVGVV--VDPNDTELEEGDIV- 83
Query: 103 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV--HGSLANQVVHPADLCFKL 160
            VP  R     G +    ++ +  + ++ P+  +F    V  HG ++     P     ++
Sbjct: 84  -VPTVRRPPASGTN----EYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRI 138
Query: 161 PDNVSLEEGAMCEPLSVG------VHACRRANIGPETNVLIMGAGPIGLVT--MLAARAF 212
           P + + E G + EP+S+        +A R A     ++  ++G G +GL+T  ML     
Sbjct: 139 PRSQA-ELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDK 197
Query: 213 GAPRIVIV---DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 269
           G   +  +   D  D  + + +E+ A  +    T ++D+ +  E+        +D  ++ 
Sbjct: 198 GYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQ--------MDFIYEA 249
Query: 270 AGLNKTMSTALGATCAGGKVCLVGM 294
            G  K    ++ A    G   L+G+
Sbjct: 250 TGFPKHAIQSVQALAPNGVGALLGV 274

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 99/248 (39%), Gaps = 49/248 (19%)
Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G+N L++    +P     ++ +R+KA G+   D+   +     D   K P+V G EC+G+
Sbjct: 14  GLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQG--NIDNPPKTPLVPGFECSGI 71
Query: 85  IEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
           +E +G  VK    GDRV                                M F      + 
Sbjct: 72  VEALGDSVKGYEIGDRV--------------------------------MAFVN----YN 95
Query: 145 SLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGPETNVLIMGAGPIG 202
           + A  V  P +  +K+PD++S  E A      ++  V     AN+    +VL+  AG  G
Sbjct: 96  AWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGG-G 154
Query: 203 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI-AEEVEKIQKAMGT 261
           +   +A      P + +          A     + I    T+L D  A+ V+++++    
Sbjct: 155 VGQAVAQLCSTVPNVTV-------FGTASTFKHEAIKDSVTHLFDRNADYVQEVKRISAE 207
Query: 262 GIDVSFDC 269
           G+D+  DC
Sbjct: 208 GVDIVLDC 215

>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From Streptomyces Coelicolor A3(2) Length = 456

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 135/350 (38%), Gaps = 60/350 (17%)
Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY-----LKTL-------RCADFVVKEPM 75
           ++ +    +P LGP + LV + A  +  + VH      L T        R +D   +  +
Sbjct: 57  SIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDL 116
Query: 76  ---VIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYN--- 129
              VIG + AGV+ + G  V     GD V               C   +      +N   
Sbjct: 117 PYHVIGSDLAGVVLRTGPGVNAWQAGDEVV------------AHCLSVELESSDGHNDTM 164
Query: 130 LCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRR----- 184
           L PE + +      G LA   +  ++     PD++S EE A   P  V   A R+     
Sbjct: 165 LDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAA--PGLVNSTAYRQLVSRN 222
Query: 185 -ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 242
            A +    NVLI GA G +G      A A GA  I +V     +  + + +GA+ I+  +
Sbjct: 223 GAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQ-KAEICRAMGAEAIIDRN 281
Query: 243 T---------NLQDIAEEVEKIQKAM-----GTGIDVSFDCAGLNKTMSTALGATCAGGK 288
                     N QD  +E ++  K +     G  ID+ F+  G  +T   ++  T  GG 
Sbjct: 282 AEGYRFWKDENTQD-PKEWKRFGKRIRELTGGEDIDIVFEHPG-RETFGASVFVTRKGGT 339
Query: 289 V--CLVGMGH-HEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKI 335
           +  C    G+ HE        +++ +       Y+  W     L+  G+I
Sbjct: 340 ITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWE-ANRLIAKGRI 388

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 114/289 (39%), Gaps = 57/289 (19%)
Query: 42  YDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIEKVGSEVKTLVPGD 99
           + VL+++ A G+   + +    +R   +  K   P   G + AGVIE VG        GD
Sbjct: 58  HQVLIKVHACGVNPVETY----IRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGD 113
Query: 100 RVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFK 159
           RV                                   F +  + G  A   +      +K
Sbjct: 114 RV-----------------------------------FTSSTISGGYAEYALAADHTVYK 138
Query: 160 LPDNVSLEEGAMCE-PLSVGVHA-CRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPR 216
           LP+ +  ++GA    P      A    A +    +VL+ GA G +GL     ARA+G   
Sbjct: 139 LPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKI 198
Query: 217 IVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG-TGIDVSFDCAGLNKT 275
           +     ++ +  V +  GA  +     N +++   ++KI+K +G  GID+  +    N  
Sbjct: 199 LGTAGTEEGQKIVLQN-GAHEVF----NHREV-NYIDKIKKYVGEKGIDIIIEMLA-NVN 251
Query: 276 MSTALGATCAGGKVCLVGMGHHEMTVPLTP--AAVREVDVVGVFRYKNT 322
           +S  L     GG+V +VG      T+ + P     +E  ++GV  + +T
Sbjct: 252 LSKDLSLLSHGGRVIVVG---SRGTIEINPRDTMAKESSIIGVTLFSST 297

>pdb|2B5V|A Chain A, Crystal Structure Of Glucose Dehydrogenase From Haloferax Mediterranei Length = 357

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 30/265 (11%)
Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVT 102
           + LVR   VG+ G+D   +          ++ +V+GHE  GV+  V      L  GD V 
Sbjct: 27  EALVRTLRVGVDGTDHEVIAGGHGGFPEGEDHLVLGHEAVGVV--VDPNDTELEEGDIV- 83
Query: 103 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV--HGSLANQVVHPADLCFKL 160
            VP  R     G +    ++ +  + ++ P+  +F    V  HG ++     P     ++
Sbjct: 84  -VPTVRRPPASGTN----EYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRI 138
Query: 161 PDNVSLEEGAMCEPLSVG------VHACRRANIGPETNVLIMGAGPIGLVT--MLAARAF 212
           P + + E G + EP+S+        +A R A     ++  ++G G +GL+T  ML     
Sbjct: 139 PRSQA-ELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDK 197
Query: 213 GAPRIVIV---DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 269
           G   +  +   D  D  + + +E+ A  +    T ++D+ +  E+        +D  ++ 
Sbjct: 198 GYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQ--------MDFIYEA 249
Query: 270 AGLNKTMSTALGATCAGGKVCLVGM 294
            G  K    ++ A    G   L+G+
Sbjct: 250 TGFPKHAIQSVQALAPNGVGALLGV 274

>pdb|2CD9|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form Length = 366

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 107/272 (39%), Gaps = 53/272 (19%)
Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY------LKTL-RCADFVVKEPMVI 77
           GV    +   +L S G   + +R    GICG+D         L TL +  DF     +V+
Sbjct: 12  GVQVKDVDEKKLDSYGK--IKIRTIYNGICGTDREIVNGKLTLSTLPKGKDF-----LVL 64
Query: 78  GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
           GHE  GV+E+          GD V  +P +R        C  C +C  GR + C E   F
Sbjct: 65  GHEAIGVVEE---SYHGFSQGDLV--MPVNRRG------CGICRNCLVGRPDFC-ETGEF 112
Query: 138 ATPPVH---GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS---------------VGV 179
               +H   G +            K+P ++  + G + +PL+               V V
Sbjct: 113 GEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPV 171
Query: 180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 239
             C    +     VL++G GPIG++  L  R +G      ++V         E+    I 
Sbjct: 172 WTCDDGTLNCR-KVLVVGTGPIGVLFTLLFRTYG------LEVWMANRREPTEVEQTVIE 224
Query: 240 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 271
           +  TN  + +   +K++ ++G   DV  D  G
Sbjct: 225 ETKTNYYNSSNGYDKLKDSVGK-FDVIIDATG 255

>pdb|2CDB|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex With Nadp And Glucose Length = 366

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 107/272 (39%), Gaps = 53/272 (19%)
Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY------LKTL-RCADFVVKEPMVI 77
           GV    +   +L S G   + +R    GICG+D         L TL +  DF     +V+
Sbjct: 12  GVQVKDVDEKKLDSYGK--IKIRTIYNGICGADREIVNGKLTLSTLPKGKDF-----LVL 64
Query: 78  GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
           GHE  GV+E+          GD V  +P +R        C  C +C  GR + C E   F
Sbjct: 65  GHEAIGVVEE---SYHGFSQGDLV--MPVNRRG------CGICRNCLVGRPDFC-ETGEF 112
Query: 138 ATPPVH---GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS---------------VGV 179
               +H   G +            K+P ++  + G + +PL+               V V
Sbjct: 113 GEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPV 171
Query: 180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 239
             C    +     VL++G GPIG++  L  R +G      ++V         E+    I 
Sbjct: 172 WTCDDGTLNCR-KVLVVGTGPIGVLFTLLFRTYG------LEVWMANRREPTEVEQTVIE 224
Query: 240 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 271
           +  TN  + +   +K++ ++G   DV  D  G
Sbjct: 225 ETKTNYYNSSNGYDKLKDSVGK-FDVIIDATG 255

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	372
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	1e-172
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	1e-168
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	1e-162
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	1e-154
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	1e-153
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	1e-148
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	1e-144
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	1e-127
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	1e-124
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	1e-96
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	6e-86
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	1e-70
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	3e-68
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	1e-63
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	1e-60
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	2e-55
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	8e-55
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	4e-49
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	1e-48
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	6e-48
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	9e-48
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	1e-47
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	1e-46
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	6e-46
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	2e-45
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	2e-44
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	2e-42
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	9e-40
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	4e-39
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	1e-38
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	1e-38
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	7e-34
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	6e-33
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	2e-30
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	1e-28
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	5e-28
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	6e-28
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	2e-27
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	6e-27
4eye_A	342	Probable oxidoreductase; structural genomics, niai	1e-26
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	1e-25
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	2e-25
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	2e-25
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	9e-25
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	1e-24
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	6e-24
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	9e-24
3gms_A	340	Putative NADPH:quinone reductase; structural genom	1e-23
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	1e-23
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	1e-23
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	7e-22
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	2e-21
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	3e-21
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	8e-21
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	2e-20
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	1e-19
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	1e-17
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	2e-17
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	2e-16
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	1e-14
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	1e-06
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	3e-06
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	2e-05
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	9e-05
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	2e-04
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	9e-04

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  483 bits (1245), Expect = e-172
 Identities = 167/354 (47%), Positives = 231/354 (65%), Gaps = 13/354 (3%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct: 8   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
           GHE +G +EKVGS VK L PGDRV        A+EPG      + CK GRYNL P + F 
Sbjct: 68  GHEASGTVEKVGSSVKHLKPGDRV--------AIEPGAPRENDEFCKMGRYNLSPSIFFC 119

Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
           ATPP  G+L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ G
Sbjct: 120 ATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCG 179

Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 257
           AGPIG+VT+L A+A GA ++V+ D+   RLS AKEIGAD ++++S   +   E   K++ 
Sbjct: 180 AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK--ESPQEIARKVEG 237

Query: 258 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF 317
            +G   +V+ +C G   ++   + AT +GG + LVG+G    TVPL  AA+REVD+ GVF
Sbjct: 238 QLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVF 297

Query: 318 RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 371
           RY NTWP+ + +L S  ++VKPLVTHRF    ++  EAFET  + G  +K+M  
Sbjct: 298 RYCNTWPVAISMLASKSVNVKPLVTHRFPL--EKALEAFET-FKKGLGLKIMLK 348

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  473 bits (1220), Expect = e-168
 Identities = 172/355 (48%), Positives = 231/355 (65%), Gaps = 12/355 (3%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++A L   N L+++   +P     +VL++M  VGICGSDVHY +  R ADF+VK+PMVI
Sbjct: 5   NLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 64

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
           GHE +G + KVG  VK L  GDRV        A+EPG+ C RC  CK G+YNLCP++ F 
Sbjct: 65  GHEASGTVVKVGKNVKHLKKGDRV--------AVEPGVPCRRCQFCKEGKYNLCPDLTFC 116

Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
           ATPP  G+LA   VH AD C KLPDNVSLEEGA+ EPLSVGVHACRRA +   T VL++G
Sbjct: 117 ATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIG 176

Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 257
           AGPIGLV++LAA+A+GA  +V       RL VAK  GAD  + V    ++ +  +E+I+ 
Sbjct: 177 AGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRS 235

Query: 258 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF 317
           A+G   +V+ DC+G  K ++  +  T  GG + LVGMG   +TVPL  A  RE+D+  VF
Sbjct: 236 AIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVF 295

Query: 318 RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFN 371
           RY N +P+ LE++ SG+ +VK LVTH F    ++  +AFE + +     IKVM +
Sbjct: 296 RYCNDYPIALEMVASGRCNVKQLVTHSFKL--EQTVDAFEAARKKADNTIKVMIS 348

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  457 bits (1177), Expect = e-162
 Identities = 137/366 (37%), Positives = 202/366 (55%), Gaps = 24/366 (6%)

Query: 15  EEVNMAAWLLGVNTLKIQPFEL--------PSLGPYDVLVRMKAVGICGSDVHYLKTLRC 66
            + N+  +    + L I               L   +V V +++ GICGSDVH+ K    
Sbjct: 6   SKTNIGVFTNPQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCI 65

Query: 67  ADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGG 126
              +V+   V+GHE AG +  V   VK++  GDRV        A+EP + C  C+ C  G
Sbjct: 66  GPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRV--------AIEPQVICNACEPCLTG 117

Query: 127 RYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRAN 186
           RYN C  + F +TPPV G L   V HPA  C K+ + +S E GAM EPLSV +   +RA 
Sbjct: 118 RYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYENGAMLEPLSVALAGLQRAG 176

Query: 187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL- 245
           +     VLI GAGPIGL+TML A+A GA  +VI D+D+ RL  AKEI  + +      L 
Sbjct: 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLS 236

Query: 246 -QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT 304
            ++ A+++ +     G    V+ +C G+  +++ A+ A   GGKV ++G+G +E+ +P  
Sbjct: 237 AEESAKKIVES--FGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFM 294

Query: 305 PAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-G 363
            A+VREVD+   +RY NTWP  + L+ +G +D+  LVTHRF    ++  +AFET++    
Sbjct: 295 RASVREVDLQFQYRYCNTWPRAIRLVENGLVDLTRLVTHRFPL--EDALKAFETASDPKT 352

Query: 364 TAIKVM 369
            AIKV 
Sbjct: 353 GAIKVQ 358

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  437 bits (1126), Expect = e-154
 Identities = 108/355 (30%), Positives = 169/355 (47%), Gaps = 21/355 (5%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
            A L     L +    +P  GP ++LVR++A  ICG+D+H  K    A   ++ P+V GH
Sbjct: 4   LAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGH 63

Query: 80  ECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 139
           E +GV+E VG  V+    GD V        +LE  I C  C  C+ G Y++C   +    
Sbjct: 64  EFSGVVEAVGPGVRRPQVGDHV--------SLESHIVCHACPACRTGNYHVCLNTQILGV 115

Query: 140 PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAG 199
               G  A  VV PA+  +  P ++  E  A+ EP    VH     +     +VLI GAG
Sbjct: 116 DR-DGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAG 174

Query: 200 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 259
           PIGL+  +  RA GA  I++ D + YRL+ A+      +  +  +L      +E +++  
Sbjct: 175 PIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVNPLEEDL------LEVVRRVT 228

Query: 260 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF- 317
           G+G++V  + +G    +   L A   GG+  ++G+    +   L    V R +   G+  
Sbjct: 229 GSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAG 288

Query: 318 -RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 371
            R   TW     L+ SG++D+ PL+THR   S     EAF      G A+KV+ +
Sbjct: 289 RRLWQTWMQGTALVYSGRVDLSPLLTHRLPLS--RYREAFGL-LASGQAVKVILD 340

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  434 bits (1119), Expect = e-153
 Identities = 104/369 (28%), Positives = 174/369 (47%), Gaps = 21/369 (5%)

Query: 5   GMSQGEKEDGEEVNM-AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKT 63
           G+  G +    +  M A  L  V  + ++   +P  GP D+LV+++A GICG+D H L  
Sbjct: 10  GVDLGTENLYFQSMMKAVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLH- 68

Query: 64  LRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHC 123
               +F    P+ +GHE  G++ + GS V+ + PG R+          +P ISC RC  C
Sbjct: 69  ---GEFPSTPPVTLGHEFCGIVVEAGSAVRDIAPGARI--------TGDPNISCGRCPQC 117

Query: 124 KGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACR 183
           + GR NLC  ++        G  A  V+ P    F++P  +    GA CEPL+  +H   
Sbjct: 118 QAGRVNLCRNLRAIGIHR-DGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVD 176

Query: 184 RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST 243
            + I   + V I+G G IGL+T+  AR  GA  +++      +  +A+E+GA   V  S 
Sbjct: 177 LSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSA 236

Query: 244 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPL 303
              D+ E +      +  G+DV  +CAG+ +T+  +     AGG V ++G+      V +
Sbjct: 237 --GDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEI 294

Query: 304 TPAAV--REVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSAR 361
            P  +  RE+ V+G F          +L+ +G I++  +++ R      E  +       
Sbjct: 295 EPFDILFRELRVLGSFINPFVHRRAADLVATGAIEIDRMISRRISLD--EAPDVISN-PA 351

Query: 362 GGTAIKVMF 370
               +KV+ 
Sbjct: 352 AAGEVKVLV 360

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  421 bits (1085), Expect = e-148
 Identities = 93/361 (25%), Positives = 157/361 (43%), Gaps = 29/361 (8%)

Query: 20  AAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           +        +++    +P +    +V V++ + G+CGSD+  +       +    P+ +G
Sbjct: 3   SVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYY----PITLG 58

Query: 79  HECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA 138
           HE +G I+ VGS V  L PGD V        A  P + C+ C  C  G Y+ C +  F  
Sbjct: 59  HEFSGYIDAVGSGVDDLHPGDAV--------ACVPLLPCFTCPECLKGFYSQCAKYDFIG 110

Query: 139 TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGA 198
           +    G  A  +V      F LP ++ +E+GA  EP++VG+HA   A      NV+I+GA
Sbjct: 111 SRR-DGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGA 169

Query: 199 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 258
           G IGL+ +  A A GA  +  +D+   +L++AK  GA      S       +    +   
Sbjct: 170 GTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE--MSAPQMQSVL--R 225

Query: 259 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP---AAVREVDVVG 315
                 +  + AG+ +T+  A+       ++ LVG  H ++ +          +E+ V+G
Sbjct: 226 ELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIG 285

Query: 316 VFRY------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 369
            +           W     LL   K+ ++PL+ HR  F      +A    AR     KV+
Sbjct: 286 SWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFE--SFAQAVRDIARNAMPGKVL 343

Query: 370 F 370
            
Sbjct: 344 L 344

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  412 bits (1062), Expect = e-144
 Identities = 106/347 (30%), Positives = 180/347 (51%), Gaps = 19/347 (5%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
            ++   ++P  GP +VL+++ A  ICG+D+H  +    A   +K P ++GHE AG + ++
Sbjct: 17  AELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEI 76

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 148
           G  V+         +  GD V++E  I C +C  C+ G+Y++C   K F      G  A 
Sbjct: 77  GPGVE--------GIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAE 127

Query: 149 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLA 208
             V PA   +K P ++  E   + EPL   V       I  ++ VLI GAGP+GL+ +  
Sbjct: 128 YAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLGLLGIAV 186

Query: 209 ARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 268
           A+A GA  +++ +  D+R  +AK++GAD ++      +D+ +EV  I    G G+DV  +
Sbjct: 187 AKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE--EDVVKEVMDI--TDGNGVDVFLE 242

Query: 269 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTWPL 325
            +G  K +   L A    G+V L+G+   ++T+      + + + + G+       TW  
Sbjct: 243 FSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYT 302

Query: 326 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 372
              LL+SGK+++ P++TH++     + EEAFE   R G   KV+F L
Sbjct: 303 VSRLLQSGKLNLDPIITHKY-KGFDKYEEAFEL-MRAGKTGKVVFML 347

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  369 bits (950), Expect = e-127
 Identities = 71/370 (19%), Positives = 133/370 (35%), Gaps = 42/370 (11%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
            A   G +   +     P     + LVR   VG+CG+D   +          ++ +V+GH
Sbjct: 4   IAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGH 63

Query: 80  ECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 139
           E  GV+  V      L  GD V              +    ++ +  + ++ P+  +F  
Sbjct: 64  EAVGVV--VDPNDTELEEGDIVVPTVR------RPPASGTNEYFERDQPDMAPDGMYFER 115

Query: 140 PPV--HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANI------GPET 191
             V  HG ++     P     ++P + + E G + EP+S+   A   A           +
Sbjct: 116 GIVGAHGYMSEFFTSPEKYLVRIPRSQA-ELGFLIEPISITEKALEHAYASRSAFDWDPS 174

Query: 192 NVLIMGAGPIGLVTMLAARAF--GAPRIVIV---DVDDYRLSVAKEIGADNIVKVSTNLQ 246
           +  ++G G +GL+T+   +    G   +  +   D  D  + + +E+ A  +    T ++
Sbjct: 175 SAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVE 234

Query: 247 DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPA 306
           D+ +  E         +D  ++  G  K    ++ A    G   L+G+           A
Sbjct: 235 DVPDVYE--------QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGA 286

Query: 307 A-----VREVDVVGVFRYKN--TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS 359
                 +    +VG             +   +  K  ++ LVT     S  E E AF+  
Sbjct: 287 FHREMVLHNKALVGSVNSHVEHFEAATVTFTKLPKWFLEDLVTGVHPLS--EFEAAFD-- 342

Query: 360 ARGGTAIKVM 369
               T IK  
Sbjct: 343 -DDDTTIKTA 351

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  362 bits (931), Expect = e-124
 Identities = 89/390 (22%), Positives = 167/390 (42%), Gaps = 32/390 (8%)

Query: 3   KGGMSQGEKE-DGEEVNMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHY 60
           +     G K+ +G+   + + +     ++++    P +  P ++++++KA GICGSDVH 
Sbjct: 15  RPEFKLGPKDIEGKLTWLGSKVWRYPEVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHM 74

Query: 61  LKTLRCADFVV----KEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGIS 116
            +T      +       P+ +GHE +GV+ + G E        R     G+ V  E  + 
Sbjct: 75  AQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFE--IGEPVCAEEMLW 132

Query: 117 CWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD-------NVSLEEG 169
           C  C  C  G  N C  +       V G+ A  V   A   + L +       +     G
Sbjct: 133 CGHCRPCAEGFPNHCENLNELGFN-VDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAG 191

Query: 170 AMCEPLSVGVHAC--RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRL 227
           ++ EP SV  +A   R   I P  NV+I+G GPIGL  +   +  GA ++++ +  + R 
Sbjct: 192 SLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRR 251

Query: 228 SVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCA-- 285
           ++AKE+GAD+++  +   ++  E V       G G  +  +  G+ + +   +       
Sbjct: 252 NLAKELGADHVIDPTK--ENFVEAVLDY--TNGLGAKLFLEATGVPQLVWPQIEEVIWRA 307

Query: 286 -GGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVFRYK--NTWPLCLELLRSGKIDVKPL 340
            G    +  +   +  +PLT      R   +VG   +    T+P  + L+ SG +D+  +
Sbjct: 308 RGINATVAIVARADAKIPLTGEVFQVRRAQIVGSQGHSGHGTFPRVISLMASG-MDMTKI 366

Query: 341 VTHRFGFSQKEVEEAFETSARGGTAIKVMF 370
           ++        E+ E  +      + +KV  
Sbjct: 367 ISKTVSME--EIPEYIKRLQTDKSLVKVTM 394

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  291 bits (746), Expect = 1e-96
 Identities = 65/372 (17%), Positives = 125/372 (33%), Gaps = 53/372 (14%)

Query: 29  LKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLK--TLRCADFVVKEPMVIGHECAGVI 85
           ++++  +   L     + +R    GICG+D   +            K+ +V+GHE  GV+
Sbjct: 13  VQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVV 72

Query: 86  EKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVH 143
           E+                  GD V       C  C +C  GR + C   +F       + 
Sbjct: 73  EESYHGFS-----------QGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMD 121

Query: 144 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRA--------------NIGP 189
           G +            K+P ++  + G + +PL+    +                      
Sbjct: 122 GFMREWWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLN 180

Query: 190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIA 249
              VL++G GPIG++  L  R +G    +    +   +               TN  + +
Sbjct: 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETK------TNYYNSS 234

Query: 250 EEVEKIQKAMGTGIDVSFDCAGLNKT-MSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV 308
              +K++ ++G   DV  D  G +   +   +      G + L G      +VPL    +
Sbjct: 235 NGYDKLKDSVG-KFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFS-TSGSVPLDYKTL 292

Query: 309 -----REVDVVGVFRYKNT-WPLCLELLRSGKI----DVKPLVTHRFGFSQKEVEEAFET 358
                    ++G+   +   +   +  L S K       K L+T     +  + +E  + 
Sbjct: 293 QEIVHTNKTIIGLVNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSIN--DEKELLKV 350

Query: 359 SARG-GTAIKVM 369
                   IK+ 
Sbjct: 351 LREKEHGEIKIR 362

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  264 bits (676), Expect = 6e-86
 Identities = 88/357 (24%), Positives = 150/357 (42%), Gaps = 27/357 (7%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L  + FE+  +    +LV + + G+CGSDVH  +     D  V  P+++GHE AG + +V
Sbjct: 30  LVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRG---EDPRVPLPIILGHEGAGRVVEV 86

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCK-GGRYNLCPEMKFFATP------- 140
             E + L   +   L PGD +    GI+C  C  CK      LCP  K +          
Sbjct: 87  NGEKRDL---NGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYP 143

Query: 141 PVHGSLANQ-VVHPADLCFKLPDNVSLEEGAMCEP-LSVGVHACRR-ANIGPETNVLIMG 197
            + G  ++  V+ P     K+ +   L+  AM     +   HA            V+I G
Sbjct: 144 HLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQG 203

Query: 198 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQ 256
           AGP+GL  ++ AR+ GA  ++++     RL +A+EIGAD  +    T++++  + +  I 
Sbjct: 204 AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDI- 262

Query: 257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVR---EVDV 313
              G G D   +  G ++ +         GG   + G+   +  VP              
Sbjct: 263 -THGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATF 321

Query: 314 VGVFRYKNT-WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 369
            G++    + +   + +       +  L+THR      E  +A E       A+KV+
Sbjct: 322 KGIWVSDTSHFVKTVSITSRNYQLLSKLITHRLPLK--EANKALEL-MESREALKVI 375

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  223 bits (572), Expect = 1e-70
 Identities = 95/365 (26%), Positives = 148/365 (40%), Gaps = 34/365 (9%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
              +L +  +     E P+ GP+D +VR  AV  C SD+H +          +  M++GH
Sbjct: 3   GFAMLSIGKVGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG---ERHNMILGH 59

Query: 80  ECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF-- 137
           E  G + +VGSEVK   PGDRV +VP            WR    + G +     M     
Sbjct: 60  EAVGEVVEVGSEVKDFKPGDRV-VVP-------AITPDWRTSEVQRGYHQHSGGMLAGWK 111

Query: 138 ATPPVHGSLANQV-VHPADL-CFKLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVL 194
            +    G       V+ AD+    LP  + LE   M  + ++ G H    ANI     V 
Sbjct: 112 FSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVC 171

Query: 195 IMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK 254
           ++G GP+GL+++  A   GA RI  V    +   +A E GA +I+       DI E++ K
Sbjct: 172 VIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKN--GDIVEQILK 229

Query: 255 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA----VRE 310
                G G+D      G   T + A+     G  +  V        + +  +     +  
Sbjct: 230 ATD--GKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGH 287

Query: 311 VDVVG----VFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAFET-SARGGT 364
             + G      R        ++L+   ++D   LVTH F GF    +E+AF     +   
Sbjct: 288 KHIHGGLCPGGRL--RMERLIDLVFYKRVDPSKLVTHVFRGFD--NIEKAFMLMKDKPKD 343

Query: 365 AIKVM 369
            IK +
Sbjct: 344 LIKPV 348

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  217 bits (555), Expect = 3e-68
 Identities = 95/340 (27%), Positives = 152/340 (44%), Gaps = 31/340 (9%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVH-----YLKTLRCADFVVKEPMVIGHECAG 83
           L +Q   +P      VL++++A G+C SDVH     +       D  VK P+ +GHE AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72

Query: 84  VIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 143
            IE+VG EV             GD VA+ P      C +C+ G  +LC   ++       
Sbjct: 73  KIEEVGDEVV--------GYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFD 123

Query: 144 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS-VGV---HACRRANIGPETNVLIMGA- 198
           G+ A  V+ P          ++  E A   PL+  G+    A R+A++ P   +L++GA 
Sbjct: 124 GAYAEYVIVPHYKYMYKLRRLNAVEAA---PLTCSGITTYRAVRKASLDPTKTLLVVGAG 180

Query: 199 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 258
           G +G + +  A+A     I+ VDV +  +  AK  GAD ++  S   QD   E+ +I + 
Sbjct: 181 GGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASM--QDPLAEIRRITE- 237

Query: 259 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR 318
              G+D   D     KT+S    A    GK  +VG+   ++        + E+  VG   
Sbjct: 238 -SKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLV 296

Query: 319 Y-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 357
             ++ +   + L  +GK  VKP++T        E  EA +
Sbjct: 297 GNQSDFLGIMRLAEAGK--VKPMITKTMKLE--EANEAID 332

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  205 bits (524), Expect = 1e-63
 Identities = 85/345 (24%), Positives = 137/345 (39%), Gaps = 33/345 (9%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             +     P+ GP ++L+++ A G+C SD+  +     A +    P+ +GHE  G + ++
Sbjct: 13  PVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPA-AQYAYGLPLTLGHEGVGTVAEL 71

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP----VHG 144
           G  V     GD V        A+     C  C  C  GR N C         P      G
Sbjct: 72  GEGVTGFGVGDAV--------AVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPG 123

Query: 145 SLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRR--ANIGPETNVLIMGAGP 200
           S+A  ++  +        ++     A      L+   HA  R    +GP +  +++G G 
Sbjct: 124 SMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPY-HAISRVLPLLGPGSTAVVIGVGG 182

Query: 201 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 260
           +G V +   RA  A R++ VD+DD RL++A+E+GAD  VK        A+ + ++    G
Sbjct: 183 LGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA---GAADAIRELTG--G 237

Query: 261 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYK 320
            G    FD  G   T+ TA       G + +VG+                  VV    Y 
Sbjct: 238 QGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTP--YW 295

Query: 321 NTW---PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 362
            T       + L R+G++D   + T  F     E   A+     G
Sbjct: 296 GTRSELMEVVALARAGRLD---IHTETFTLD--EGPAAYRRLREG 335

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  198 bits (506), Expect = 1e-60
 Identities = 82/339 (24%), Positives = 147/339 (43%), Gaps = 32/339 (9%)

Query: 29  LKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
           L+I+  + P L G +DV+VR+   G+C +D+H ++ +       K P  +GHE  G IE+
Sbjct: 28  LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEE 87

Query: 88  VGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 147
           V   V+ L  GD V         L P ++   C  C+ G    C  ++F     + G  A
Sbjct: 88  VAEGVEGLEKGDPV--------ILHPAVTDGTCLACRAGEDMHCENLEFPGLN-IDGGFA 138

Query: 148 NQVVHPADLCFKLPDNVSLEEGAMCEPLS-VGV---HACRRA--NIGPETNVLIMGAGPI 201
             +        KLP ++S E+     PL+  G+    A ++A   + P   V I+G G +
Sbjct: 139 EFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGL 198

Query: 202 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 261
           G + +   +      ++ +DV + +L +A+ +GAD++V      +D  ++V ++ +  G 
Sbjct: 199 GHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR---RDPVKQVMELTR--GR 253

Query: 262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 321
           G++V+ D  G   T+          G++ +VG G  E+  P       EV   G      
Sbjct: 254 GVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG-GELRFPTIRVISSEVSFEGS--LVG 310

Query: 322 TW---PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 357
            +      + L   GK+    +          E+ +  E
Sbjct: 311 NYVELHELVTLALQGKVR---VEVDIHKLD--EINDVLE 344

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  185 bits (472), Expect = 2e-55
 Identities = 86/371 (23%), Positives = 145/371 (39%), Gaps = 65/371 (17%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
            ++Q  ++      +VLV++ A G+C +D+               P V+GHE +G+IE +
Sbjct: 19  FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPL----PAVLGHEGSGIIEAI 74

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK------------- 135
           G  V  L  GD V L  G          C +C  C  G    C E               
Sbjct: 75  GPNVTELQVGDHVVLSYG---------YCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNH 125

Query: 136 -------------FFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH-- 180
                        FFA      S A   +   +   K+  +V +E      PL  G+   
Sbjct: 126 ALCTHDQGVVNDHFFAQ----SSFATYALSRENNTVKVTKDVPIELLG---PLGCGIQTG 178

Query: 181 ---ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN 237
                    + P ++ +  GAG +GL  +LAA+  GA  I+ VD+ + RL +AK++GA +
Sbjct: 179 AGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATH 238

Query: 238 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH 297
           ++    N +   + V  I++    G++ + +  G  + +   + A    GK+ +VG    
Sbjct: 239 VI----NSKT-QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQL 293

Query: 298 EMTVPLTPAA--VREVDVVGVF----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKE 351
             T         +    ++GV       K   P  + L + GK     LV   + F   E
Sbjct: 294 GTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFD--E 350

Query: 352 VEEAFETSARG 362
           + +A   S +G
Sbjct: 351 INQAAIDSRKG 361

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  182 bits (465), Expect = 8e-55
 Identities = 73/341 (21%), Positives = 135/341 (39%), Gaps = 39/341 (11%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+   +P     +VL+R+   G+C +D+   K +  A    + P+++GHE AG I +V
Sbjct: 16  LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVE-AKQGFRLPIILGHENAGTIVEV 74

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 148
           G   K         +  GD V +        C +C+ G++N+C           +G  + 
Sbjct: 75  GELAK---------VKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQT-TNGGFSE 124

Query: 149 QVVHPADLCFKLPDNVSLEEGAMCEPLSV-GV---HACRRA----NIGPETNVLIMGAGP 200
            ++  +       +++S  E A   PL+  G     A R+A    +   E  V++ G G 
Sbjct: 125 YMLVKSSRWLVKLNSLSPVEAA---PLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGG 181

Query: 201 IGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 259
           + + T+   +A      IV +         A E+GAD +      ++D    + K+    
Sbjct: 182 LAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVS----EMKDAESLINKLTD-- 235

Query: 260 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY 319
           G G  ++ D  G  +T           G + LVGM    +++     AV    ++G    
Sbjct: 236 GLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGS--N 293

Query: 320 KNTWPLCLELL---RSGKIDVKPLVTHRFGFSQKEVEEAFE 357
             +     +++    SGKI        +      ++ +AF 
Sbjct: 294 YGSLNDLEDVVRLSESGKIKP---YIIKVPLD--DINKAFT 329

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  168 bits (428), Expect = 4e-49
 Identities = 88/371 (23%), Positives = 152/371 (40%), Gaps = 61/371 (16%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  E+      +V +++ A  +C +D++              P+V+GHECAG++E V
Sbjct: 21  LCIEEIEVSPPKACEVRIQVIATCVCPTDINATD----PKKKALFPVVLGHECAGIVESV 76

Query: 89  GSEVKTLVPGDRV--TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------ 140
           G  V    PGD+V     P           C RC  C     NLC +++ F  P      
Sbjct: 77  GPGVTNFKPGDKVIPFFAP----------QCKRCKLCLSPLTNLCGKLRNFKYPTIDQEL 126

Query: 141 -------------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH-- 180
                         ++      S +   V       ++ D  +LE       +  G    
Sbjct: 127 MEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVC---LIGCGFSSG 183

Query: 181 ---ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN 237
              A   A + P +   + G G +GL  ++  +  GA RI+ +D++  +   AK +GA +
Sbjct: 184 YGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATD 243

Query: 238 IVKVSTNLQDIAEEV-EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMG 295
            +    N +++ + V + I +    G+D S DCAG  +T+  A+  T  G G   +VG  
Sbjct: 244 CL----NPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAK 299

Query: 296 HHEMTVPLTPAAVREVDVVGVF----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKE 351
             EMT+P     +    + G F    +  ++ P  +   ++ K D+  LVTH   F    
Sbjct: 300 VDEMTIPTVD-VILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFE--S 356

Query: 352 VEEAFETSARG 362
           + +A +    G
Sbjct: 357 INDAIDLMKEG 367

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  167 bits (425), Expect = 1e-48
 Identities = 92/378 (24%), Positives = 148/378 (39%), Gaps = 57/378 (15%)

Query: 20  AAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           AA        L I+  E+     ++V +++ A  +C +D +   TL  AD     P+++G
Sbjct: 9   AAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILG 65

Query: 79  HECAGVIEKVGSEVKTLVPGDRV--TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF 136
           H  AG++E VG  V  L  GD V    +P           C  C  C   + NLC +++ 
Sbjct: 66  HLGAGIVESVGEGVTKLKAGDTVIPLYIP----------QCGECKFCLNPKTNLCQKIRV 115

Query: 137 FATP---------------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS 176
                               +       + +   V       K+     L++  +   L 
Sbjct: 116 TQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCL---LG 172

Query: 177 VGVH-----ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK 231
            G+      A   A + P +   + G G +GL  ++  +  GA RI+ VD++  + + AK
Sbjct: 173 CGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAK 232

Query: 232 EIGADNIVKVSTNLQDIAEEV-EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKV 289
           E GA   +    N QD ++ + E + +    G+D SF+C G  K M  AL A   G G  
Sbjct: 233 EFGATECI----NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVS 288

Query: 290 CLVGMGHHEMTVPLTPAA-VREVDVVGVF----RYKNTWPLCLELLRSGKIDVKPLVTHR 344
            +VG+      +   P   V      G      +   + P  +    S KI V   VTH 
Sbjct: 289 VVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHN 348

Query: 345 FGFSQKEVEEAFETSARG 362
             F   E+ +AFE    G
Sbjct: 349 LSFD--EINKAFELMHSG 364

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score =  166 bits (422), Expect = 6e-48
 Identities = 79/378 (20%), Positives = 138/378 (36%), Gaps = 68/378 (17%)

Query: 41  PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDR 100
            + V++++ +  ICGSD H  +      F+V +  V+GHE  G + + GS+V+ +  GD 
Sbjct: 32  EHAVILKVVSTNICGSDQHIYR----GRFIVPKGHVLGHEITGEVVEKGSDVELMDIGDL 87

Query: 101 VTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF----------FATPPVHGSLANQV 150
           V  VP         ++C RC +CK  R ++C               F      G  A  V
Sbjct: 88  V-SVP-------FNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYV 139

Query: 151 -VHPADL-CFKLPDNVSLEEG-----AMCEPLSVGVHACRRANIGPETNVLIMGAGPIGL 203
            V  AD    K  D     E       + + L  G H C  A + P ++V I GAGP+G 
Sbjct: 140 LVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGCVSAGVKPGSHVYIAGAGPVGR 199

Query: 204 VTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM-GTG 262
                AR  GA  +++ D +  RL +  + G + I     +L++ A   ++I + +    
Sbjct: 200 CAAAGARLLGAACVIVGDQNPERLKLLSDAGFETI-----DLRNSAPLRDQIDQILGKPE 254

Query: 263 IDVSFDCAGL--------------NKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV 308
           +D   D  G               N  +++      AGG + + G+       P+   A 
Sbjct: 255 VDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNKDAG 314

Query: 309 REVDVV--GVFRYKN------------TWPLCLELLRSGKIDVKP--LVTHRFGFSQKEV 352
                +  G    K+                  E +   ++      +          + 
Sbjct: 315 SGRLHLDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITLD--QA 372

Query: 353 EEAFETSARGGTAIKVMF 370
            + +    +G    K + 
Sbjct: 373 PDGYAKFDKGS-PAKFVI 389

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  165 bits (419), Expect = 9e-48
 Identities = 91/373 (24%), Positives = 149/373 (39%), Gaps = 58/373 (15%)

Query: 20  AAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           AA L        I+  E+     ++V ++M A GIC SD H +        V   P++ G
Sbjct: 11  AAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAG 66

Query: 79  HECAGVIEKVGSEVKTLVPGDRV--TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF 136
           HE AG++E +G  V T+ PGD+V     P           C +C  CK    N C +   
Sbjct: 67  HEAAGIVESIGEGVTTVRPGDKVIPLFTP----------QCGKCRVCKHPEGNFCLKNDL 116

Query: 137 FATP---------------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS 176
                              P+H      + +   V       K+     LE+  +   + 
Sbjct: 117 SMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCL---IG 173

Query: 177 VGVH-----ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK 231
            G       A + A +   +   + G G +GL  ++  +A GA RI+ VD++  + + AK
Sbjct: 174 CGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK 233

Query: 232 EIGADNIVKVSTNLQDIAEEV-EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKV 289
           E+GA   V    N QD  + + E + +    G+D SF+  G   TM TAL       G  
Sbjct: 234 EVGATECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVS 289

Query: 290 CLVGMGHHEMTVPLTPAA-VREVDVVGVF----RYKNTWPLCLELLRSGKIDVKPLVTHR 344
            +VG+      + + P   +      G      + K++ P  +    + K  + PL+TH 
Sbjct: 290 VIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHV 349

Query: 345 FGFSQKEVEEAFE 357
             F   ++ E F+
Sbjct: 350 LPFE--KINEGFD 360

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  164 bits (418), Expect = 1e-47
 Identities = 85/363 (23%), Positives = 144/363 (39%), Gaps = 59/363 (16%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L ++   +     ++V +++ A GICGSD   LK         K P+++GHE  GV+E +
Sbjct: 22  LSLETITVAPPKAHEVRIKILASGICGSDSSVLK----EIIPSKFPVILGHEAVGVVESI 77

Query: 89  GSEVKTLVPGDRV--TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------ 140
           G+ V  + PGD+V    VP           C  C  CK    N C +    A        
Sbjct: 78  GAGVTCVKPGDKVIPLFVP----------QCGSCRACKSSNSNFCEKNDMGAKTGLMADM 127

Query: 141 ---------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHAC-RRA 185
                    P++      +     V       K+     LE   +    + G  A    A
Sbjct: 128 TSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATGYGAAVNTA 187

Query: 186 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL 245
            + P +   + G G +G   ++  +A GA RI+ V     +   A E+GA   +    N 
Sbjct: 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECL----NP 243

Query: 246 QDIAEEV-EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPL 303
           +D  + + E I +    G+D + +CAG  +TM  AL +T  G G   ++G+      +PL
Sbjct: 244 KDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPL 303

Query: 304 TPAAVREVDVVGVFRYKNTW---------PLCLELLRSGKIDVKPLVTHRFGFSQKEVEE 354
            P     + ++     K +             ++     KI+V  LV+ +      ++ +
Sbjct: 304 DP-----LLLLTGRSLKGSVFGGFKGEEVSRLVDDYMKKKINVNFLVSTKLTLD--QINK 356

Query: 355 AFE 357
           AFE
Sbjct: 357 AFE 359

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score =  162 bits (413), Expect = 1e-46
 Identities = 74/379 (19%), Positives = 137/379 (36%), Gaps = 71/379 (18%)

Query: 41  PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDR 100
            + V++++ +  ICGSD H ++         +  +V+GHE  G + + G +V+ L  GD 
Sbjct: 33  EHGVILKVVSTNICGSDQHMVR----GRTTAQVGLVLGHEITGEVIEKGRDVENLQIGDL 88

Query: 101 VTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK---------FFATPPVHGSLANQVV 151
           V  VP         ++C RC  CK     +C  +          +       G  A  V+
Sbjct: 89  V-SVP-------FNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVL 140

Query: 152 HP-ADL-CFKLPDNVSLEEG-----AMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLV 204
            P AD    KLPD     E       + + L  G H    A +GP + V + GAGP+GL 
Sbjct: 141 VPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLA 200

Query: 205 TMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 264
              +AR  GA  +++ D++  RL+ AK  G +      +    + E++  +       +D
Sbjct: 201 AAASARLLGAAVVIVGDLNPARLAHAKAQGFEIA--DLSLDTPLHEQIAALLG--EPEVD 256

Query: 265 VSFDCAGL---------------NKTMSTALGATCAGGKVCLVG-------------MGH 296
            + D  G                   +++ +  T   GK+ + G                
Sbjct: 257 CAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKI 316

Query: 297 HEMTVPLTPAAVREVDVVG----VFRYKNTWPLCLELLRSGKIDVKPLV-THRFGFSQKE 351
             +++       +          V +Y       ++ +   +I++  +V          +
Sbjct: 317 GSLSIRFGLGWAKSHSFHTGQTPVMKY---NRALMQAIMWDRINIAEVVGVQVISLD--D 371

Query: 352 VEEAFETSARGGTAIKVMF 370
               +      G   K + 
Sbjct: 372 APRGYGEFDA-GVPKKFVI 389

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  159 bits (404), Expect = 6e-46
 Identities = 85/302 (28%), Positives = 129/302 (42%), Gaps = 44/302 (14%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKEPMVIGHECAGVIE 86
           L I    +P  GP  V V+++A G+C +D+H        D+      P + GHE  G + 
Sbjct: 15  LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAAD----GDWPVKPTLPFIPGHEGVGYVS 70

Query: 87  KVGSEVKTLVPGDRVTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFATPP 141
            VGS V  +  GDRV            G+     +C  C+HC  G   LC + +      
Sbjct: 71  AVGSGVSRVKEGDRV------------GVPWLYSACGYCEHCLQGWETLCEKQQ-NTGYS 117

Query: 142 VHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGV---HACRRANIGPETNVLIM 196
           V+G     VV   +    LPD V   E A  +C     GV      +  +  P   V+I 
Sbjct: 118 VNGGYGEYVVADPNYVGLLPDKVGFVEIAPILC----AGVTVYKGLKVTDTRPGQWVVIS 173

Query: 197 GAGPIGLVTMLA--ARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK 254
           G G  GL  +    ARA G  R+  VD+DD +L++A+ +GA+  V  + +  D A     
Sbjct: 174 GIG--GLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAV-NARD-TDPAAW--- 225

Query: 255 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV 314
           +QK +G G       A   K  S A+G    GG + L G+   +   P+    ++ + + 
Sbjct: 226 LQKEIG-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIR 284

Query: 315 GV 316
           G 
Sbjct: 285 GS 286

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  159 bits (404), Expect = 2e-45
 Identities = 88/377 (23%), Positives = 146/377 (38%), Gaps = 56/377 (14%)

Query: 20  AAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           AA     N  L I+  E+      ++ +++ A G+C +D++    L         P+V+G
Sbjct: 11  AAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLY---HLFEGKHKDGFPVVLG 67

Query: 79  HECAGVIEKVGSEVKTLVPGDRV--TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF 136
           HE AG++E VG  V    PG++V    +            C  C  C+  + N C +   
Sbjct: 68  HEGAGIVESVGPGVTEFQPGEKVIPLFIS----------QCGECRFCQSPKTNQCVKGWA 117

Query: 137 FATP---------------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS 176
             +P                V       + +   V       K+  +  L+   +   L 
Sbjct: 118 NESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCL---LG 174

Query: 177 VGVH-----ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK 231
            GV      A   A + P +   + G G +GL  ++   + GA RI+ VD++  +   AK
Sbjct: 175 CGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK 234

Query: 232 EIGADNIVKVSTNLQDIAEEV-EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKV 289
             GA + V    N  D +E + + + K    G+D S +C G    M  AL +   G G  
Sbjct: 235 VFGATDFV----NPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVS 290

Query: 290 CLVGMGHHEM--TVPLTPAAVREVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF 345
            LVG        T P+   A R     + G F+ K+  P  ++     K+ +   +THR 
Sbjct: 291 VLVGWTDLHDVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRM 350

Query: 346 GFSQKEVEEAFETSARG 362
                 V +A +    G
Sbjct: 351 PLE--SVNDAIDLMKHG 365

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  155 bits (394), Expect = 2e-44
 Identities = 96/299 (32%), Positives = 142/299 (47%), Gaps = 40/299 (13%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKEPMVIGHECAGVIE 86
           LKI+  E P++   +VLVR+KA G+C +D+H        D+    K P++ GHE  G++E
Sbjct: 13  LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGIVE 68

Query: 87  KVGSEVKTLVPGDRVTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFATPP 141
           +VG  V  L  GDRV            GI     +C  CD+C  G+  LC   K  A   
Sbjct: 69  EVGPGVTHLKVGDRV------------GIPWLYSACGHCDYCLSGQETLCEHQK-NAGYS 115

Query: 142 VHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGV---HACRRANIGPETNVLIM 196
           V G  A      AD   K+PDN+S EE A   C     GV    A +     P   V I 
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFC----AGVTTYKALKVTGAKPGEWVAIY 171

Query: 197 GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ 256
           G G +G V +  A+A G   +V VD+ D +L +AKE+GAD +V      +D A+    ++
Sbjct: 172 GIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVV-NPLK-EDAAKF---MK 225

Query: 257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 315
           + +G G+  +   A       +A  +   GG   LVG+   EM +P+    +  + ++G
Sbjct: 226 EKVG-GVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIG 283

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  150 bits (380), Expect = 2e-42
 Identities = 74/303 (24%), Positives = 121/303 (39%), Gaps = 44/303 (14%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKEPMVIGHECAGVIE 86
           L+ +   +P     ++L+ +K  G+C +D+H        D+   VK P+V GHE AGV+ 
Sbjct: 18  LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWH----GDWPLPVKLPLVGGHEGAGVVV 73

Query: 87  KVGSEVKTLVPGDRVTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFATPP 141
            +G  VK    GD              GI     SC  C++C+ G  + CP     +   
Sbjct: 74  GMGENVKGWKIGDYA------------GIKWLNGSCMACEYCELGNESNCPHAD-LSGYT 120

Query: 142 VHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGV---HACRRANIGPETNVLIM 196
             GS        A     +P    L + A  +C     G+    A + AN+     V I 
Sbjct: 121 HDGSFQQYATADAVQAAHIPQGTDLAQVAPILC----AGITVYKALKSANLMAGHWVAIS 176

Query: 197 GAGPIGLVTMLA---ARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE 253
           GA   GL ++ A   A+A G  R++ +D  + +  + + IG +  +   T  +DI   V 
Sbjct: 177 GAAG-GLGSL-AVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVFI-DFTKEKDIVGAV- 231

Query: 254 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAAVREVD 312
              KA   G     + +     +  +     A G   LVGM    +    +    V+ + 
Sbjct: 232 --LKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSIS 289

Query: 313 VVG 315
           +VG
Sbjct: 290 IVG 292

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  143 bits (362), Expect = 9e-40
 Identities = 97/349 (27%), Positives = 149/349 (42%), Gaps = 32/349 (9%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP 74
           M A ++    G   L++    +P  GP +V VR+KA  +   DV   K +      +  P
Sbjct: 1   MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPK--LPLP 58

Query: 75  MVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM 134
            V+G + +GV++ VG  V+           PGD V + PG+SC RC+ C  G  NLCP  
Sbjct: 59  HVLGADGSGVVDAVGPGVE--------GFAPGDEVVINPGLSCGRCERCLAGEDNLCPRY 110

Query: 135 KFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV--HA-CRRANIGPET 191
           +       HG+ A  VV P       P N+S EE A   PL+          +  + P  
Sbjct: 111 QILGEHR-HGTYAEYVVLPEANLAPKPKNLSFEEAA-AIPLTFLTAWQMVVDKLGVRPGD 168

Query: 192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE 250
           +VL+M A   + +  +  A+ FGA  I     +D +L  AK +GAD  V  +    D  +
Sbjct: 169 DVLVMAAGSGVSVAAIQIAKLFGARVIATAGSED-KLRRAKALGADETVNYTH--PDWPK 225

Query: 251 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVR 309
           EV ++    G G D   D  G        + AT  GG++ + G    +E T+P      R
Sbjct: 226 EVRRLTG--GKGADKVVDHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYR 282

Query: 310 EVDVVGVF-RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 357
           ++ ++G     K+     L  +  GK+  KP+V            E   
Sbjct: 283 QLSILGSTMASKSRLFPILRFVEEGKL--KPVVGQVLPLE--AAAEGHR 327

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  141 bits (359), Expect = 4e-39
 Identities = 78/360 (21%), Positives = 133/360 (36%), Gaps = 49/360 (13%)

Query: 19  MAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFV 70
           M  W       + LK+    +P  G +D++VR  AV +   D                  
Sbjct: 28  MQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGM-------GLD 80

Query: 71  VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNL 130
           +  P V   + +GV+E VG  V    PGDRV                        G    
Sbjct: 81  LAFPFVPASDMSGVVEAVGKSVTRFRPGDRVISTF--------------APGWLDGLRPG 126

Query: 131 CPEMKFFATP--PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV---HA-CRR 184
                 + T      G L+  VV P       P ++   E +   P   G+    A   +
Sbjct: 127 TGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEAS-TLPC-AGLTAWFALVEK 184

Query: 185 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN 244
            ++     V++ G G + L  +  A+A GA  IV     + +L  A  +GAD+ +     
Sbjct: 185 GHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSRE-KLDRAFALGADHGINRLE- 242

Query: 245 LQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPL 303
            +D  E V  +      G D   + AG    +  +L A    G++ ++G +   E++ P+
Sbjct: 243 -EDWVERVYALTG--DRGADHILEIAG-GAGLGQSLKAVAPDGRISVIGVLEGFEVSGPV 298

Query: 304 TPAAVREVDVVGVF-RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 362
            P  ++   V G+   ++      +  +    +  KP++  R+ F+  EV EA     RG
Sbjct: 299 GPLLLKSPVVQGISVGHRRALEDLVGAVDRLGL--KPVIDMRYKFT--EVPEALAHLDRG 354

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  142 bits (360), Expect = 1e-38
 Identities = 74/389 (19%), Positives = 131/389 (33%), Gaps = 65/389 (16%)

Query: 14  GEEVNMAAWLL-----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV---------- 58
            +E  M A L         ++ +    +P LGP + LV + A  +  + V          
Sbjct: 38  KDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLST 97

Query: 59  --HYLKTLRCADFVVKEPM---VIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEP 113
                +  R +D   +  +   VIG + AGV+ + G  V     GD V            
Sbjct: 98  FGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL------- 150

Query: 114 GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE 173
             S             L PE + +      G LA   +  ++     PD++S EE A   
Sbjct: 151 --SVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAA-AP 207

Query: 174 PLSVG-----VHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYR 226
            L        + +   A +    NVLI GA G +G      A A GA    I  V    +
Sbjct: 208 GLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGA--NPICVVSSPQK 265

Query: 227 LSVAKEIGADNIV---------------KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 271
             + + +GA+ I+               +     +   + + ++    G  ID+ F+  G
Sbjct: 266 AEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTG--GEDIDIVFEHPG 323

Query: 272 LNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVF--RYKNTWPLCLE 328
             +T   ++  T  GG +        +          +    ++G     Y+  W     
Sbjct: 324 -RETFGASVFVTRKGGTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEA-NR 381

Query: 329 LLRSGKIDVKPLVTHRFGFSQKEVEEAFE 357
           L+  G+I   P ++  +     +  +A  
Sbjct: 382 LIAKGRI--HPTLSKVYSLE--DTGQAAY 406

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  142 bits (359), Expect = 1e-38
 Identities = 70/370 (18%), Positives = 126/370 (34%), Gaps = 54/370 (14%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE----------- 73
              +L++    +P L P +VLV + A  I  + V          F   +           
Sbjct: 46  VRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATR 105

Query: 74  ----PMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYN 129
                 V+G +C+GV+ + G  V+   PGD V + P               +    G   
Sbjct: 106 HDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPA---------HVDEQEPATHGDGM 156

Query: 130 LCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG-----VHACRR 184
           L  E + +      G LA   V  A      P +++ EE A   PL  G     + + R 
Sbjct: 157 LGTEQRAWGFETNFGGLAEYGVVRASQLLPKPAHLTWEEAA-VSPLCAGTAYRMLVSDRG 215

Query: 185 ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV---- 239
           A +     VLI GA G +G   +   +  G   + +V     + +  + +G D ++    
Sbjct: 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQ-KEAAVRALGCDLVINRAE 274

Query: 240 ---------KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVC 290
                         ++   +  + + +  G   D+ F+  G   T   ++     GG V 
Sbjct: 275 LGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTG-RVTFGLSVIVARRGGTVV 333

Query: 291 LVG-MGHHEMTVPLTPAAVREVDVVGVF--RYKNTWPLCLELLRSGKIDVKPLVTHRFGF 347
             G    +  T       ++   +VG     ++        L  SG +   P ++  +  
Sbjct: 334 TCGSSSGYLHTFDNRYLWMKLKKIVGSHGANHEEQQAT-NRLFESGAV--VPAMSAVYPL 390

Query: 348 SQKEVEEAFE 357
           +  E  EA  
Sbjct: 391 A--EAAEACR 398

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  127 bits (322), Expect = 7e-34
 Identities = 58/365 (15%), Positives = 119/365 (32%), Gaps = 70/365 (19%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCAD---FVVKEPMVIGHECAGVI 85
           ++++  EL ++   DV V+M A  I  SD+              + + P V G+E    +
Sbjct: 42  VELKNLELAAVRGSDVRVKMLAAPINPSDI-----NMIQGNYGLLPELPAVGGNEGVAQV 96

Query: 86  EKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 145
             VGS V  L PGD V                                          G+
Sbjct: 97  VAVGSNVTGLKPGDWV-----------------------------------IPANAGLGT 121

Query: 146 LANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGA-GPIG 202
              + V   +   ++P ++ L+  A     P +          + P  +V+   +   +G
Sbjct: 122 WRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVG 181

Query: 203 LVTMLAARAFGAPRIVIV---DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 259
              +  A A G   I +V             K +GA++++          E     +   
Sbjct: 182 QAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEE--LRRPEMKNFFKD-- 237

Query: 260 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVF- 317
                ++ +C G  K+ +  L     GG +   G M    +   ++    +++ + G + 
Sbjct: 238 MPQPRLALNCVG-GKSSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWL 296

Query: 318 ----------RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIK 367
                     ++K       +L+R G++        +      + + A E S +   + K
Sbjct: 297 SQWKKDHSPDQFKELILTLCDLIRRGQL--TAPACSQVPLQ--DYQSALEASMKPFISSK 352

Query: 368 VMFNL 372
            +  +
Sbjct: 353 QILTM 357

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  125 bits (315), Expect = 6e-33
 Identities = 54/377 (14%), Positives = 115/377 (30%), Gaps = 64/377 (16%)

Query: 26  VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK-------TLRCADFVVKEPMVIG 78
           V   +    +  +L P +V+V+     +  SD++ ++                +     G
Sbjct: 18  VLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCG 77

Query: 79  HECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA 138
           +E    + KVGS V +L  GD V       +        WR        + L  +  F  
Sbjct: 78  NEGLFEVIKVGSNVSSLEAGDWV-------IPSHVNFGTWR-------THALGNDDDFIK 123

Query: 139 TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHAC-------RRANIGPET 191
            P                    P+ +++ +GA      + V+             + P  
Sbjct: 124 LPNP----------AQSKANGKPNGLTINQGAT-----ISVNPLTAYLMLTHYVKLTPGK 168

Query: 192 NVLIMGA--GPIGLVTMLAARAFGAPRIVIV---DVDDYRLSVAKEIGADNIVKVST-NL 245
           +  I       +G       +      I ++      D  ++  KE+GA  ++     N 
Sbjct: 169 DWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNS 228

Query: 246 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLT 304
           ++    +++  K  G    ++ +C G  K+ +         G +   G M    +T+P +
Sbjct: 229 REFGPTIKEWIKQSGGEAKLALNCVG-GKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTS 287

Query: 305 PAAVREVDVVGVF----------RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQ-KEVE 353
               +     G +             +T    +     GK+      +    +   K + 
Sbjct: 288 LYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKL--TDAKSIETLYDGTKPLH 345

Query: 354 EAFETSARGGTAIKVMF 370
           E ++         K + 
Sbjct: 346 ELYQDGVANSKDGKQLI 362

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score =  118 bits (297), Expect = 2e-30
 Identities = 71/303 (23%), Positives = 118/303 (38%), Gaps = 53/303 (17%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
                K   ++      +D+ ++++A G+CGSD+H           +K P+V+GHE  G 
Sbjct: 17  DWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIH---CAAGHWGNMKMPLVVGHEIVGK 73

Query: 85  IEKVGSEVKTLV-PGDRVTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKF-F 137
           + K+G +  + +  G RV            G+     SC  CD CK      C +    +
Sbjct: 74  VVKLGPKSNSGLKVGQRV------------GVGAQVFSCLECDRCKNDNEPYCTKFVTTY 121

Query: 138 ATPPVHGSL-----ANQVVHPADLCFKLPDNVSLEEGA--MC------EPLSVGVHACRR 184
           + P   G +     AN V         +P+N+     A  +C       PL        R
Sbjct: 122 SQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPL-------VR 174

Query: 185 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN 244
              GP   V I+G G IG +  L ++A GA   VI      R   A ++GAD+ +  +  
Sbjct: 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKR-EDAMKMGADHYI-ATL- 231

Query: 245 LQDIAEEVEKIQKAMGTGIDVSFDC--AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP 302
                EE +  +K   T  D+   C  +  +   +    A   GG++  + +      + 
Sbjct: 232 -----EEGDWGEKYFDT-FDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLS 285

Query: 303 LTP 305
           L P
Sbjct: 286 LKP 288

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score =  113 bits (285), Expect = 1e-28
 Identities = 76/297 (25%), Positives = 123/297 (41%), Gaps = 51/297 (17%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L    F   + G  DV  ++   G+C SD+H   +++        P+V GHE  G + +V
Sbjct: 29  LSPFNFSRRATGEEDVRFKVLYCGVCHSDLH---SIKNDWGFSMYPLVPGHEIVGEVTEV 85

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEM------KFF 137
           GS+VK +  GD+V            G+     +C  C+ C     N CP+M       + 
Sbjct: 86  GSKVKKVNVGDKV------------GVGCLVGACHSCESCANDLENYCPKMILTYASIYH 133

Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MC------EPLSVGVHACRRANIG- 188
                +G  +N +V       + PDN+ L+ GA  +C       PL       +   +  
Sbjct: 134 DGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPL-------KYFGLDE 186

Query: 189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 248
           P  ++ I+G G +G V +  A+AFG+   VI      +    K  GAD+ + VS +    
Sbjct: 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFL-VSRD---- 241

Query: 249 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP 305
               E++Q A GT +D   D       +    G   + GK+ LVG     + +P   
Sbjct: 242 ---QEQMQAAAGT-LDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFS 294

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score =  111 bits (281), Expect = 5e-28
 Identities = 66/302 (21%), Positives = 116/302 (38%), Gaps = 51/302 (16%)

Query: 34  FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93
           + L   GP DV +R+   GIC +D+H     +    +   PMV GHE  G + +VGS+V 
Sbjct: 27  YTLRETGPEDVNIRIICCGICHTDLH---QTKNDLGMSNYPMVPGHEVVGEVVEVGSDVS 83

Query: 94  TLVPGDRVTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEM------KFFATPPV 142
               GD V            G+      C  C  C+      CP+        +    P 
Sbjct: 84  KFTVGDIV------------GVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPT 131

Query: 143 HGSLANQVVHPADLCFKLPDNVSLEEGA--MC------EPLSVGVHACRRANIG-PETNV 193
            G  A   V       K+P+ +++E+ A  +C       PL           +  P    
Sbjct: 132 QGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPL-------SHFGLKQPGLRG 184

Query: 194 LIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE 253
            I+G G +G + +  A+A G    VI   +  R    +++GAD+ V + ++         
Sbjct: 185 GILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYV-IGSD-------QA 236

Query: 254 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDV 313
           K+ +   + +D   D   ++  +   L      GK+ L+G+ ++ +        +    +
Sbjct: 237 KMSELADS-LDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVI 295

Query: 314 VG 315
            G
Sbjct: 296 TG 297

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score =  111 bits (279), Expect = 6e-28
 Identities = 67/300 (22%), Positives = 107/300 (35%), Gaps = 58/300 (19%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
            K   F   ++GP DVL+ +   GIC SD+H   +          PM+ GHE AG+I++V
Sbjct: 17  FKPHDFSRHAVGPRDVLIDILYAGICHSDIH---SAYSEWKEGIYPMIPGHEIAGIIKEV 73

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEM--------K 135
           G  VK    GD V            G+     SC  C  CK  +   C ++         
Sbjct: 74  GKGVKKFKIGDVV------------GVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDS 121

Query: 136 FFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MC------EPLSVGVHACRRANI 187
           F    P  G  +N +V   +    +  N  LE+ A  +C       PL       + + +
Sbjct: 122 FHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPL-------KFSKV 174

Query: 188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD 247
              T V + G G +G + +  A A GA   V    +  +   A  +G  +          
Sbjct: 175 TKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKK-QDALSMGVKHFY-TDP---- 228

Query: 248 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA 307
                   ++     +D        +  +   L      G + LVG+   E+   L+   
Sbjct: 229 --------KQCKEE-LDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFD 279

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  109 bits (275), Expect = 2e-27
 Identities = 62/368 (16%), Positives = 111/368 (30%), Gaps = 76/368 (20%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVH------YLKTLRCAD 68
           M A           LK+     P      +L+++ A  +   D        ++      +
Sbjct: 7   MKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNN 66

Query: 69  FVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRY 128
                P  +G++ +G + ++GS+V  +  GD+V                           
Sbjct: 67  L----PSGLGYDFSGEVIELGSDVNNVNIGDKV--------------------------- 95

Query: 129 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV---HACRRA 185
                M     P      A  V    D   +  + +S  + A   P   G+    A  +A
Sbjct: 96  -----MGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAA-SLPT-AGLTALQALNQA 148

Query: 186 NIGPETNVLIMGAGPIGLVTMLA---ARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 242
            +     VLI      G V  LA   A+  G    VI        +  K +GA+  +   
Sbjct: 149 EVKQGDVVLIHAGA--GGVGHLAIQLAKQKGT--TVITTASKRNHAFLKALGAEQCINYH 204

Query: 243 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP 302
              +D    +        T +D   D  G       ++      G   +V +        
Sbjct: 205 E--EDFLLAI-------STPVDAVIDLVG-GDVGIQSIDCLKETGC--IVSVPTITAGRV 252

Query: 303 LTPAAVREVDVVGVFRYKNTWPL--CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 360
           +  A  +     G+ +  N   L    +L+   K+  +  ++  F  S  E   A E   
Sbjct: 253 IEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKL--RIEISRIFQLS--EAVTAHELLE 308

Query: 361 RGGTAIKV 368
            G    K+
Sbjct: 309 TGHVRGKL 316

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score =  108 bits (273), Expect = 6e-27
 Identities = 64/287 (22%), Positives = 98/287 (34%), Gaps = 53/287 (18%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+         GP DV + +   G+C SD+H    +R        P V GHE  G +  V
Sbjct: 35  LEPMDITRREPGPNDVKIEIAYCGVCHSDLH---QVRSEWAGTVYPCVPGHEIVGRVVAV 91

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKF------- 136
           G +V+   PGD V            G+     SC  C+ C+ G  N C  M         
Sbjct: 92  GDQVEKYAPGDLV------------GVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTP 139

Query: 137 FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA---MC------EPLSVGVHACRRANI 187
                  G  + Q+V       ++             +C       PL       R    
Sbjct: 140 DEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPL-------RHWQA 192

Query: 188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD 247
           GP   V ++G G +G + +  A A GA  +     +  R   AK +GAD +V  S N   
Sbjct: 193 GPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALGADEVV-NSRN--- 247

Query: 248 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 294
                +++   + +  D   +       +          G + LVG 
Sbjct: 248 ----ADEMAAHLKS-FDFILNTVAAPHNLDDFTTLLKRDGTMTLVGA 289

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score =  107 bits (270), Expect = 1e-26
 Identities = 83/387 (21%), Positives = 133/387 (34%), Gaps = 79/387 (20%)

Query: 6   MSQGEKEDGEEVNMAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL 61
           M   E +     +M A       G   L     E P  GP  V+V +KA G+C  D    
Sbjct: 9   MGTLEAQTQGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDY--- 65

Query: 62  KTLRCAD---FVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCW 118
             L         ++ P V G E AGV+     E   + PGDRV       +A        
Sbjct: 66  --LMTKGEYQLKMEPPFVPGIETAGVVRSAP-EGSGIKPGDRV-------MAFNFI---- 111

Query: 119 RCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG 178
                                    G  A +V          P  +   E       +  
Sbjct: 112 -------------------------GGYAERVAVAPSNILPTPPQLDDAEAV-ALIANYH 145

Query: 179 -VHAC--RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG 234
            ++    RR  +     VL++GA G IG   +  A+  GA  I +V+         K +G
Sbjct: 146 TMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTA-ATEFVKSVG 204

Query: 235 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 294
           AD ++ +    +  A+ V +     G G+D+  D  G       A+    + G++ +VG 
Sbjct: 205 ADIVLPLE---EGWAKAVREATG--GAGVDMVVDPIG-GPAFDDAVRTLASEGRLLVVGF 258

Query: 295 --GHHEMTVPLTPAAVREVDVVGVF----------RYKNTWPLCLELLRSGKIDVKPLVT 342
             G    T+ +    +R   ++GV               T     +L+  G   ++P V+
Sbjct: 259 AAGGIP-TIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG---MRPPVS 314

Query: 343 HRFGFSQKEVEEAFETSARGGTAIKVM 369
            R   S  E  +A +  A G    K++
Sbjct: 315 ARIPLS--EGRQALQDFADGKVYGKMV 339

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  104 bits (262), Expect = 1e-25
 Identities = 62/370 (16%), Positives = 109/370 (29%), Gaps = 70/370 (18%)

Query: 15  EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADF 69
           +  + +A       L+     +P+ GP  VL+++    I  SDV      Y         
Sbjct: 23  KTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQY-------GQ 75

Query: 70  VVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYN 129
              +    G E  G I   G E            + G RVA   G+S             
Sbjct: 76  PRVKGRPAGFEGVGTIVAGGDEPYAK-------SLVGKRVAFATGLS------------- 115

Query: 130 LCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANI 187
                         GS A   V  A  C  L D V  E+GA  +  PL+  +        
Sbjct: 116 ------------NWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTA-IAMFDIVKQ 162

Query: 188 GPETNVLIMGA-GPIGL-VTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL 245
             E   ++      +   +  L A+  G   IV V  D+ ++++ K+IGA +++      
Sbjct: 163 EGEKAFVMTAGASQLCKLIIGL-AKEEGFRPIVTVRRDE-QIALLKDIGAAHVLNEKA-- 218

Query: 246 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM--GHHEMTVPL 303
            D    + ++ K       +  D        S    A     +  + G       +    
Sbjct: 219 PDFEATLREVMK--AEQPRIFLDAVT-GPLASAIFNAMPKRARWIIYGRLDPDATVIREP 275

Query: 304 TPAAVREVDVVGVF--RYKNTWPLCL--------ELLRSGKIDVKPLVTHRFGFSQKEVE 353
                +   + G +   +   +            +    G+      VT     ++    
Sbjct: 276 GQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRW--STDVTAVVPLAEAIAW 333

Query: 354 EAFETSARGG 363
              E +   G
Sbjct: 334 VPAELTKPNG 343

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score =  104 bits (262), Expect = 2e-25
 Identities = 65/389 (16%), Positives = 110/389 (28%), Gaps = 94/389 (24%)

Query: 18  NMAAWLLGV--NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM 75
              A  +              P L    V VR++AV I  SD                  
Sbjct: 11  QQTALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSM------RGQFATPWA 64

Query: 76  VIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK 135
            +G + AG +  VGS+V  +  GDRV                                  
Sbjct: 65  FLGTDYAGTVVAVGSDVTHIQVGDRV------------------YGAQNEMCPR------ 100

Query: 136 FFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV---------------GVH 180
                P  G+ +   V    +  K+P  +S E+ A   P  +                  
Sbjct: 101 ----TPDQGAFSQYTVTRGRVWAKIPKGLSFEQAA-ALPAGISTAGLAMKLLGLPLPSPS 155

Query: 181 ACRRANIGPETNVLIMG-AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 239
           A +         VL+ G +     VTM   R  G   I I     +   +AK  GA+ + 
Sbjct: 156 ADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY--IPIATCSPHNFDLAKSRGAEEV- 212

Query: 240 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGAT-CAGGKVCLVGMGHHE 298
                  ++    + I+      +  + DC    ++ +    A   AGG    +      
Sbjct: 213 -FDYRAPNL---AQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSL------ 262

Query: 299 MTVPLTPAAVREVDVVGVFRY-------------------------KNTWPLCLELLRSG 333
              P   A  + V                                 ++ W +  +L+  G
Sbjct: 263 NPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDG 322

Query: 334 KIDVKPLVTHRFGFSQKEVEEAFETSARG 362
           ++   PL   + GF    +++  E   +G
Sbjct: 323 RLVHHPLRVVQGGFDH--IKQGMELVRKG 349

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score =  103 bits (260), Expect = 2e-25
 Identities = 67/276 (24%), Positives = 115/276 (41%), Gaps = 48/276 (17%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G +    +  ++ S GP  V +R  A+G+   D ++   +     V + P+V+G E A V
Sbjct: 12  GPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAV 71

Query: 85  IEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
           +E+VG  V     G+RV                                      PP+ G
Sbjct: 72  VEEVGPGVTDFTVGERVC----------------------------------TCLPPL-G 96

Query: 145 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHAC----RRANIGPETNVLIM-GAG 199
           + + + ++PA+   K+P ++ L++  +   +  G+ A     +   + P   VLI   AG
Sbjct: 97  AYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAG 156

Query: 200 PIGLVTMLAARAFGAPRIVIVDV-DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 258
            +G + +  AR  GA   VI  V  + +   A+++G  + +  ST  QD AE V +I   
Sbjct: 157 GMGHIMVPWARHLGA--TVIGTVSTEEKAETARKLGCHHTINYST--QDFAEVVREITG- 211

Query: 259 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 294
            G G+DV +D  G   T+  +L      G     G 
Sbjct: 212 -GKGVDVVYDSIG-KDTLQKSLDCLRPRGMCAAYGH 245

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score =  102 bits (257), Expect = 9e-25
 Identities = 67/355 (18%), Positives = 119/355 (33%), Gaps = 84/355 (23%)

Query: 35  ELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVVKEPMVIGHECAGVIEKVG 89
            +P    + VL+++ A G+   +       Y             P   G + AGVIE VG
Sbjct: 51  AVPIPKDHQVLIKVHACGVNPVETYIRSGTY-------SRKPLLPYTPGSDVAGVIEAVG 103

Query: 90  SEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQ 149
                   GDRV        +                                 G  A  
Sbjct: 104 DNASAFKKGDRVF------TSSTIS-----------------------------GGYAEY 128

Query: 150 VVHPADLCFKLPDNVSLEEGAMCEPLSVG-VHAC--RRANIGPETNVLIMGA-GPIGLVT 205
            +      +KLP+ +  ++GA    +     +      A +    +VL+ GA G +GL  
Sbjct: 129 ALAADHTVYKLPEKLDFKQGA-AIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAA 187

Query: 206 MLAARAFGAPRIVIVDV-DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 264
              ARA+G    ++     +    +  + GA  +        +  ++++K       GID
Sbjct: 188 CQIARAYGL--KILGTAGTEEGQKIVLQNGAHEVFNHRE--VNYIDKIKKYVG--EKGID 241

Query: 265 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVFRYKNT 322
           +  +    N  +S  L     GG+V +VG      T+ + P     +E  ++GV  + +T
Sbjct: 242 IIIEMLA-NVNLSKDLSLLSHGGRVIVVGSRG---TIEINPRDTMAKESSIIGVTLFSST 297

Query: 323 -----------WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAI 366
                             +  G +  KP++  ++     +V EA E    G  A 
Sbjct: 298 KEEFQQYAAALQA----GMEIGWL--KPVIGSQYPLE--KVAEAHENIIHGSGAT 344

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score =  101 bits (255), Expect = 1e-24
 Identities = 71/385 (18%), Positives = 117/385 (30%), Gaps = 107/385 (27%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADF 69
           M A +L    G+N L++    +P     ++ +R+KA G+   D+     +        D 
Sbjct: 4   MRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNI-------DN 56

Query: 70  VVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYN 129
             K P+V G EC+G++E +G  VK    GDRV       +A                   
Sbjct: 57  PPKTPLVPGFECSGIVEALGDSVKGYEIGDRV-------MAFVNY--------------- 94

Query: 130 LCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG-VHAC--RRAN 186
                          + A  V  P +  +K+PD++S  E A   P++    +      AN
Sbjct: 95  --------------NAWAEVVCTPVEFVYKIPDDMSFSEAA-AFPMNFVTAYVMLFEVAN 139

Query: 187 IGPETNVLI-MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL 245
           +    +VL+    G +G               V      ++    K+       +     
Sbjct: 140 LREGMSVLVHSAGGGVGQAVAQLCSTVPN-VTVFGTASTFKHEAIKDSVTHLFDRN---- 194

Query: 246 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM----------- 294
            D  +EV++I      G+D+  DC          L      G   L G            
Sbjct: 195 ADYVQEVKRIS---AEGVDIVLDCLC-GDNTGKGLSLLKPLGTYILYGSSNMVTGETKSF 250

Query: 295 ------GHHEMTVPLTPAAVREVDVVGVF----------------RYKNTWPLCLELLRS 332
                       V           + G                    +        L   
Sbjct: 251 FSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIG----LYNQ 306

Query: 333 GKIDVKPLVTHRFGFSQKEVEEAFE 357
            KI  KP+V   +     EV+EA +
Sbjct: 307 KKI--KPVVDSLWALE--EVKEAMQ 327

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 99.6 bits (249), Expect = 6e-24
 Identities = 63/274 (22%), Positives = 100/274 (36%), Gaps = 49/274 (17%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE-PMVIGHECAG 83
           G   L+   F        ++ V  KA+GI   D +     R   +     P  +G E AG
Sbjct: 12  GPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYI----RSGLYPPPSLPSGLGTEAAG 67

Query: 84  VIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 143
           ++ KVGS VK +  GDRV                                   +A   + 
Sbjct: 68  IVSKVGSGVKHIKAGDRVV----------------------------------YAQSAL- 92

Query: 144 GSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMG-AGP 200
           G+ ++     AD    LP  +S E+ A    + L+V     +   I P+   L    AG 
Sbjct: 93  GAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGG 152

Query: 201 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 260
           +GL+    A+A GA  I  V     +   A + GA  ++      +D+ E +++I    G
Sbjct: 153 VGLIACQWAKALGAKLIGTVGTAQ-KAQSALKAGAWQVINYRE--EDLVERLKEITG--G 207

Query: 261 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 294
             + V +D  G   T   +L      G +   G 
Sbjct: 208 KKVRVVYDSVG-RDTWERSLDCLQRRGLMVSFGN 240

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score =  100 bits (249), Expect = 9e-24
 Identities = 59/418 (14%), Positives = 114/418 (27%), Gaps = 105/418 (25%)

Query: 6   MSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK--- 62
           +    K  GE             L +   + P  GP +VL+R++A  +  SD+  L    
Sbjct: 8   LRSRIKSSGELE-----------LSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAA 56

Query: 63  -----------------------TLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99
                                   +R     +   M +G+E AGV+ + GS         
Sbjct: 57  DMSTAKASGTAERPIVTARVPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMG 116

Query: 100 RVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFK 159
           +        VA   G                                +     PAD C  
Sbjct: 117 KT-------VAAIGG-----------------------------AMYSQYRCIPADQCLV 140

Query: 160 LPDNVSLEEGAMC--EPLSVGVHACRRANIGPETNVLIMG-AGPIGLVTMLAARAFGAPR 216
           LP+  +  +GA     PL+  +       +   + ++    A  +G +        G   
Sbjct: 141 LPEGATPADGASSFVNPLTA-LGMVETMRLEGHSALVHTAAASNLGQMLNQICLKDGIKL 199

Query: 217 IVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG---LN 273
           + IV   + +  + K  GA ++   +       +++ +    + TG  ++FD  G   L 
Sbjct: 200 VNIVRKQE-QADLLKAQGAVHV--CNAASPTFMQDLTEA--LVSTGATIAFDATGGGKLG 254

Query: 274 KTMSTALGATCAGGKVCLVGMGHHEMT------------VPLTPAAVREVDVVGVFRY-- 319
             + T + A            G                             + G   +  
Sbjct: 255 GQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTSPTEFNRNFGMAWGMGGWLLFPF 314

Query: 320 ------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 371
                 +    L   ++   K       +     ++    +      +  T  K + N
Sbjct: 315 LQKIGRERANALKQRVVAELKTTFASHYSKEISLAEVLDLDMIAVYNKRATGEKYLIN 372

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 99.6 bits (249), Expect = 1e-23
 Identities = 58/352 (16%), Positives = 114/352 (32%), Gaps = 79/352 (22%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVVKEPMVIGHECAG 83
           L+++   +  L   +V VRM    I  SD+      Y          +  P + G+E  G
Sbjct: 20  LQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAY-------AHRIPLPNIPGYEGVG 72

Query: 84  VIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 143
           ++E VG+ V   + G RV  + G                                     
Sbjct: 73  IVENVGAFVSRELIGKRVLPLRG------------------------------------E 96

Query: 144 GSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGA-GP 200
           G+    V   AD    +PD++     A     PL+  V      N+     +L+      
Sbjct: 97  GTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSA 156

Query: 201 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 260
           IG +    ++      I +   +         +GA  ++  ST    + E V ++    G
Sbjct: 157 IGHLFAQLSQILNFRLIAVTRNNK-HTEELLRLGAAYVIDTST--APLYETVMELTN--G 211

Query: 261 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM--GHHEMTVPLTPAAVREVDVVGVFR 318
            G D + D  G     +    +    G    +G+  G   + V       +      +F 
Sbjct: 212 IGADAAIDSIG-GPDGNELAFSLRPNGHFLTIGLLSG---IQVNWAEIVTKAKVHANIFH 267

Query: 319 ------------YKNTWPLCLELLRSGKIDVKPL-VTHRFGFSQKEVEEAFE 357
                       ++ T+   + L+ + ++  + + V   +  +  +V+ A +
Sbjct: 268 LRHWNDEVSPYKWQETFRHLIRLVENEQL--RFMKVHSTYELA--DVKAAVD 315

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 98.4 bits (246), Expect = 1e-23
 Identities = 67/371 (18%), Positives = 127/371 (34%), Gaps = 85/371 (22%)

Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           A+    +++ +   ++P+L   D+LV+ +A+GI   D    K ++          V G +
Sbjct: 9   AYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDW---KFIKANPINWSNGHVPGVD 65

Query: 81  CAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP 140
            AGVI KVG++V + + G RV                                   + T 
Sbjct: 66  GAGVIVKVGAKVDSKMLGRRV----------------------------------AYHTS 91

Query: 141 PVH-GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV---HACRRANIGPETNVLIM 196
               GS A   V   D    LPDN+S E  A   P    +    A  +  +  +  VLI+
Sbjct: 92  LKRHGSFAEFTVLNTDRVMTLPDNLSFERAA-ALPC-PLLTAWQAFEKIPLTKQREVLIV 149

Query: 197 GAGPIGLVTMLA--ARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK 254
           G G +    +L       G   +V +       ++A + G  ++       ++ ++  + 
Sbjct: 150 GFGAVN--NLLTQMLNNAGY--VVDLVSASLSQALAAKRGVRHLY------REPSQVTQ- 198

Query: 255 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV--------------GMGHHEMT 300
                       FD    ++  +  + +  A G +  +               + +HE+ 
Sbjct: 199 -------KYFAIFDAVN-SQNAAALVPSLKANGHIICIQDRIPAPIDPAFTRTISYHEIA 250

Query: 301 VPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 360
           +          D   + +        L L+  GK+  +      F F Q  + EA + S 
Sbjct: 251 LGALHDFGDRQDWQILMQQGEA---LLTLIAQGKM--EIAAPDIFRFEQ--MIEALDHSE 303

Query: 361 RGGTAIKVMFN 371
           +      +  N
Sbjct: 304 QTKLKTVLTLN 314

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 98.8 bits (247), Expect = 1e-23
 Identities = 74/279 (26%), Positives = 109/279 (39%), Gaps = 59/279 (21%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY------LKTLRCADFVVKEPMVIG 78
           G   L+   FE  + GP  V+VR KA+G+   D +Y         L         P  +G
Sbjct: 12  GPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFL---------PSGLG 62

Query: 79  HECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA 138
            E AGV+E VG EV     GDRV                                   + 
Sbjct: 63  AEGAGVVEAVGDEVTRFKVGDRVA----------------------------------YG 88

Query: 139 TPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIM 196
           T P+ G+ +   V P     KL D+VS E+ A  M + L+V     +   + P   +L  
Sbjct: 89  TGPL-GAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFH 147

Query: 197 G-AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 255
             AG +G +    A+A GA  I  V   + + + AK +GA   +  S   +D+A+ V ++
Sbjct: 148 AAAGGVGSLACQWAKALGAKLIGTVSSPE-KAAHAKALGAWETIDYSH--EDVAKRVLEL 204

Query: 256 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 294
               G    V +D  G   T  T+L +    G V   G 
Sbjct: 205 TD--GKKCPVVYDGVG-QDTWLTSLDSVAPRGLVVSFGN 240

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 94.6 bits (236), Expect = 7e-22
 Identities = 80/381 (20%), Positives = 122/381 (32%), Gaps = 87/381 (22%)

Query: 18  NMAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCAD 68
            M    L    G + + I    LP  G  +VLVR +A+G+   D+      Y        
Sbjct: 28  EMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSY-------P 80

Query: 69  FVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRY 128
                  ++G E +G I  VG  V     GD+V                  C    GG Y
Sbjct: 81  PPKDASPILGLELSGEIVGVGPGVSGYAVGDKV------------------CGLANGGAY 122

Query: 129 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGVHA-CRRAN 186
                             A   + PA      P      + A + E          + A 
Sbjct: 123 ------------------AEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAG 164

Query: 187 IGPETNVLIM-GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL 245
           +    +VLI  G   IG   +  ARAFGA           +    + +GA   +   +  
Sbjct: 165 LTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTG-KCEACERLGAKRGINYRS-- 221

Query: 246 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM--GHHEMTVPL 303
           +D A  ++      G G+D+  D  G        + +    G + ++    G     V L
Sbjct: 222 EDFAAVIKAET---GQGVDIILDMIG-AAYFERNIASLAKDGCLSIIAFLGGAVAEKVNL 277

Query: 304 TPAAVREVDVVGVF------RYK---------NTWPLCLELLRSGKIDVKPLVTHRFGFS 348
           +P  V+ + V G          K           WP    LL +G +   P++   F F 
Sbjct: 278 SPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWP----LLEAGTV--APVIHKVFAFE 331

Query: 349 QKEVEEAFETSARGGTAIKVM 369
             +V +A      G    KVM
Sbjct: 332 --DVADAHRLLEEGSHVGKVM 350

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 93.1 bits (232), Expect = 2e-21
 Identities = 74/350 (21%), Positives = 120/350 (34%), Gaps = 78/350 (22%)

Query: 31  IQPFELPSLGPYDVLVRMKAVGICGSDVH----YLKTLRCADFVVKEPMVIGHECAGVIE 86
           ++    P   P  VLV+++A G    D           +        P ++G + AG + 
Sbjct: 22  LRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPL-----PAILGMDLAGTVV 76

Query: 87  KVGSEVKTLVPGDRV-TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 145
            VG EV +   GD V  L  G                                   + G+
Sbjct: 77  AVGPEVDSFRVGDAVFGLTGGV--------------------------------GGLQGT 104

Query: 146 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHA----CRRANIGPETNVLIM-GAGP 200
            A      A L    P  +++ + +   PL V + A      RA +     VLI  G G 
Sbjct: 105 HAQFAAVDARLLASKPAALTMRQAS-VLPL-VFITAWEGLVDRAQVQDGQTVLIQGGGGG 162

Query: 201 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 260
           +G V +  A A GA   V        L   +++GA  I       ++  +   +     G
Sbjct: 163 VGHVAIQIALARGA--RVFATARGSDLEYVRDLGATPID----ASREPEDYAAEH--TAG 214

Query: 261 TGIDVSFDCAGLNKTMSTALGATCAGGK-VCLVGMGHHEMTVPLTPAAVREVDVVGVF-- 317
            G D+ +D  G    +  +  A    G  V  +G G H+    L P + ++    GVF  
Sbjct: 215 QGFDLVYDTLG-GPVLDASFSAVKRFGHVVSCLGWGTHK----LAPLSFKQATYSGVFTL 269

Query: 318 --RYKNTWPL--------CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 357
                N               L+++GK+   P +  R  FS  E+  A++
Sbjct: 270 HTLLANEGLAHFGEMLREADALVQTGKL--APRLDPRT-FSIAEIGSAYD 316

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 92.3 bits (230), Expect = 3e-21
 Identities = 58/276 (21%), Positives = 103/276 (37%), Gaps = 52/276 (18%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G + +K + + +PS+   ++L++ K  G+   + ++    R   +  ++P V+G E +G 
Sbjct: 19  GYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYF----RKGIYPCEKPYVLGREASGT 74

Query: 85  IEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
           +   G  V     GD+V                                   + +     
Sbjct: 75  VVAKGKGVTNFEVGDQVA----------------------------------YISNSTFA 100

Query: 145 SLANQVVHPADLCFKLPDNVSLEE-----GAMCEPLSVGVHACRRANIGPETNVLIMG-A 198
             +   +       KLP   S EE       + + L+         ++     VL+   A
Sbjct: 101 QYS--KISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAA 158

Query: 199 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 258
           G +GL+     +  GA  I +   D+ +L +AKE GA+ ++  S   +DI  +V K    
Sbjct: 159 GGVGLILNQLLKMKGAHTIAVASTDE-KLKIAKEYGAEYLINASK--EDILRQVLKFTN- 214

Query: 259 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 294
            G G+D SFD  G   T   +L A    G     G 
Sbjct: 215 -GKGVDASFDSVG-KDTFEISLAALKRKGVFVSFGN 248

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 91.7 bits (228), Expect = 8e-21
 Identities = 75/401 (18%), Positives = 129/401 (32%), Gaps = 103/401 (25%)

Query: 19  MAAWLL----GVNTLKI-QPFELPSLG-PYDVLVRMKAVGICGSDVH----YLKTLR--- 65
             AW++        L+  Q   +P +  P +V+V++ A  +   DV+    Y  T     
Sbjct: 22  SMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMK 81

Query: 66  -----CADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRC 120
                      + P+ +G + +GV+ + G +VK   PGD V                   
Sbjct: 82  RDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEV------------------- 122

Query: 121 DHCKGGRYNLCPEMKFFATPPVH-GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV 179
                          + A PP   G+L+  VV   +     P +++  + A   P  V +
Sbjct: 123 ---------------WAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAA-SLPY-VAL 165

Query: 180 --------HACRRANIGPETNVLIMGAGPIGLVTMLA---ARAFGAPRIVIVDVDDYRLS 228
                                VLI+GA   G V   A    +A+ A   V          
Sbjct: 166 TAWSAINKVGGLNDKNCTGKRVLILGAS--GGVGTFAIQVMKAWDA--HVTAVCSQDASE 221

Query: 229 VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGK 288
           + +++GAD+++   +    + E+++          D   D  G   T + A         
Sbjct: 222 LVRKLGADDVIDYKS--GSVEEQLKS-----LKPFDFILDNVG-GSTETWAPDFLKKWSG 273

Query: 289 VCLVGMGHHE-------------------MTVPLTPAAVREVDVVGVFRYKNTWPL--CL 327
              V +                       +         + V     F   +   L    
Sbjct: 274 ATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIA 333

Query: 328 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 368
           EL+ +GKI  +P++   F FS  +V EAF    RG    K 
Sbjct: 334 ELVDAGKI--RPVIEQTFPFS--KVPEAFLKVERGHARGKT 370

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 89.5 bits (223), Expect = 2e-20
 Identities = 77/361 (21%), Positives = 124/361 (34%), Gaps = 94/361 (26%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCAD---FVVKEPMVIGHECAGVI 85
           L++     P     +V++R++AVG+  +D      L         +  P + G E  GV+
Sbjct: 13  LELVDLPEPEAEEGEVVLRVEAVGLNFADH-----LMRLGAYLTRLHPPFIPGMEVVGVV 67

Query: 86  EKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 145
           E           G R         AL P                              G 
Sbjct: 68  E-----------GRRY-------AALVPQ-----------------------------GG 80

Query: 146 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG--VHACRRANIGPETNVLIMG-AGPIG 202
           LA +V  P      LP+ +S EE A   P+S      A +RA   P   VL+   AG +G
Sbjct: 81  LAERVAVPKGALLPLPEGLSPEEAA-AFPVSFLTAYLALKRAQARPGEKVLVQAAAGALG 139

Query: 203 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 262
              +  ARA G   +      + +L++   +GA+            AE  E+ +     G
Sbjct: 140 TAAVQVARAMGLRVLAAASRPE-KLALPLALGAEEAA-------TYAEVPERAKA--WGG 189

Query: 263 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAAVREVDVVGVF-RY- 319
           +D+  +  G  K +  +LG    GG++  +G        +P      R + V+G +    
Sbjct: 190 LDLVLEVRG--KEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPL 247

Query: 320 -----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 368
                          P         ++  +P+V   F F+  E E AF      G   KV
Sbjct: 248 LREGALVEEALGFLLPRL-----GREL--RPVVGPVFPFA--EAEAAFRALLDRGHTGKV 298

Query: 369 M 369
           +
Sbjct: 299 V 299

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 88.2 bits (219), Expect = 1e-19
 Identities = 62/366 (16%), Positives = 117/366 (31%), Gaps = 73/366 (19%)

Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
            +L       P+   +D+LV +KAV +   D    K  R       +  VIG++ AG++ 
Sbjct: 38  ASLLDIELPKPAPAGHDILVEVKAVSVNPVDY---KVRRSTPPDGTDWKVIGYDAAGIVS 94

Query: 87  KVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-GS 145
            VG +V    PGD V                                  F+A   +  G+
Sbjct: 95  AVGPDVTLFRPGDEV----------------------------------FYAGSIIRPGT 120

Query: 146 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHA----CRRANIGPETN-----VLIM 196
            A   +    +  + P  +   E A   PL   + A      R ++          +LI+
Sbjct: 121 NAEFHLVDERIVGRKPKTLDWAEAA-ALPL-TSITAWEAFFDRLDVNKPVPGAAPAILIV 178

Query: 197 -GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 255
            GAG +G + +  AR      ++            K +GA +++  S   + +A EV  +
Sbjct: 179 GGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHS---KPLAAEVAAL 235

Query: 256 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCL-VGMGHHEMTVPLTPAAVREVDVV 314
                      F     +K  +         G+ CL            +     + V + 
Sbjct: 236 G---LGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDPS----AFDIMLFKRKAVSIH 288

Query: 315 GVFRYKNTWPLCLELLRSGKI-----------DVKPLVTHRFG-FSQKEVEEAFETSARG 362
               +        ++   G++            ++  +T+R    +   +++A      G
Sbjct: 289 HELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESG 348

Query: 363 GTAIKV 368
               KV
Sbjct: 349 TARGKV 354

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 82.3 bits (204), Expect = 1e-17
 Identities = 65/372 (17%), Positives = 124/372 (33%), Gaps = 86/372 (23%)

Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
           N  K    ++P    +++LV+++++ +   D       R    V K P V+G +  GV+E
Sbjct: 18  NLFKTFNLDIPEPKVHEILVKIQSISVNPVDTK----QR-LMDVSKAPRVLGFDAIGVVE 72

Query: 87  KVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA-TPPVHGS 145
            VG+EV     GD V                                  +++ +P  +GS
Sbjct: 73  SVGNEVTMFNQGDIV----------------------------------YYSGSPDQNGS 98

Query: 146 LANQVVHPADLCFKLPDNVSLEE-GAMCEPLSVGVHA----CRRANIGPETN------VL 194
            A   +    L  K P N+S E+  ++  PL  G+ A         I    N      +L
Sbjct: 99  NAEYQLINERLVAKAPKNISAEQAVSL--PL-TGITAYETLFDVFGISRNRNENEGKTLL 155

Query: 195 IM-GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE 253
           I+ GAG +G +    A+A+G   I     ++  +   K++GAD ++    +L      + 
Sbjct: 156 IINGAGGVGSIATQIAKAYGLRVITTASRNE-TIEWTKKMGADIVLNHKESL------LN 208

Query: 254 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCL-VGMGHHEMTVPLTPAAVREVD 312
           + +      +D  F     +      +      G +   V   +      L     + + 
Sbjct: 209 QFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFEN---DQDLNALKPKSLS 265

Query: 313 VVGVFRYKNTWPLCL---------------ELLRSGKIDVKPLVTHRFG-FSQKEVEEAF 356
               F +    PL                   +       +P  T      + + + +A 
Sbjct: 266 FSHEFMF--ARPLNQTDDMIKHHEYLEDITNKVEQNIY--QPTTTKVIEGLTTENIYQAH 321

Query: 357 ETSARGGTAIKV 368
           +         K+
Sbjct: 322 QILESNTMIGKL 333

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 81.5 bits (202), Expect = 2e-17
 Identities = 63/384 (16%), Positives = 119/384 (30%), Gaps = 88/384 (22%)

Query: 18  NMAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCAD 68
           +M A       G   L ++    PS G  +VL+++ A  +  +D+      Y        
Sbjct: 22  SMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQY-------- 73

Query: 69  FVVK--EPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGG 126
                    ++G E +G + ++G   +            GD                 GG
Sbjct: 74  -DPPPGASNILGLEASGHVAELGPGCQG-------HWKIGDTA----------MALLPGG 115

Query: 127 RYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGVHAC--R 183
                               A  V  P  L   +P+ ++L + A + E            
Sbjct: 116 GQ------------------AQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLT-AFQLLHL 156

Query: 184 RANIGPETNVLIM-GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 242
             N+     VLI  G   +G   +   R  GA  +V       +L +A+++GA       
Sbjct: 157 VGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQK-KLQMAEKLGAAAGFNYK 215

Query: 243 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM--GHHEMT 300
              +D +E   K  K  G G+++  DC G        +      G+  L G+  G     
Sbjct: 216 K--EDFSEATLKFTK--GAGVNLILDCIG-GSYWEKNVNCLALDGRWVLYGLMGGGDING 270

Query: 301 VPLTPAAVREVDVVGVF------RYK---------NTWPLCLELLRSGKIDVKPLVTHRF 345
              +    +   ++         +YK            P         ++   P++   +
Sbjct: 271 PLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPH-FSTEGPQRL--LPVLDRIY 327

Query: 346 GFSQKEVEEAFETSARGGTAIKVM 369
             +  E++EA +         K++
Sbjct: 328 PVT--EIQEAHKYMEANKNIGKIV 349

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 80.2 bits (198), Expect = 2e-16
 Identities = 65/347 (18%), Positives = 112/347 (32%), Gaps = 78/347 (22%)

Query: 32  QPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE 91
           +P     LG  +V + M+A G+   D   L  L     +      +G E AGV+ + G  
Sbjct: 229 EPTATAPLGDGEVRIAMRAAGVNFRDA--LIALG----MYPGVASLGSEGAGVVVETGPG 282

Query: 92  VKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 151
           V  L PGDRV       + + P                               +     V
Sbjct: 283 VTGLAPGDRV-------MGMIP------------------------------KAFGPLAV 305

Query: 152 HPADLCFKLPDNVSLEEGAMCEPLSVGV------HA-CRRANIGPETNVLI-MGAGPIGL 203
               +  ++P   S    A     SV +      +A    A + P  ++L+   AG +G+
Sbjct: 306 ADHRMVTRIPAGWSFARAA-----SVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGM 360

Query: 204 VTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 263
             +  AR  GA        D ++   A E+  +++   S    D  ++        G G+
Sbjct: 361 AAIQLARHLGAEVYATASEDKWQ---AVELSREHLA-SSRTC-DFEQQFLGATG--GRGV 413

Query: 264 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMG------HHEMTVPLTPAAVREVDVVGVF 317
           DV  +     +    +L     GG    + +G        E+       + +  D V   
Sbjct: 414 DVVLNSLA-GEFADASLRMLPRGG--RFLELGKTDVRDPVEVADAHPGVSYQAFDTVEAG 470

Query: 318 --RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 362
             R        +EL     +  +PL    +   Q    EA    ++ 
Sbjct: 471 PQRIGEMLHELVELFEGRVL--EPLPVTAWDVRQ--APEALRHLSQA 513

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 73.5 bits (181), Expect = 1e-14
 Identities = 62/362 (17%), Positives = 112/362 (30%), Gaps = 78/362 (21%)

Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
            +P  G  D+LVR + VG+  SD++Y       D  VK P  IG E  G +  +G     
Sbjct: 47  PVPLPGDGDLLVRNRFVGVNASDINYSAGR--YDPSVKPPFDIGFEGIGEVVALGLSASA 104

Query: 95  LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA 154
                      G  VA                                 GS A   V PA
Sbjct: 105 RYTV-------GQAVAYMAP-----------------------------GSFAEYTVVPA 128

Query: 155 DLCFKLPDNVSLEEGAMCEPL---SVGVHACRRANIGP-ETNVLIMGA-GPIGLVTMLAA 209
            +   +P     E   +        + +       +   +  VL+  A G  G   M  +
Sbjct: 129 SIATPVPSVKP-EYLTLLVSGTTAYISLK--ELGGLSEGKK-VLVTAAAGGTGQFAMQLS 184

Query: 210 RAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 269
           +      I     D+ + +  K +G D  +   T  + +   ++   +    G+DV ++ 
Sbjct: 185 KKAKCHVIGTCSSDE-KSAFLKSLGCDRPINYKT--EPVGTVLK---QEYPEGVDVVYES 238

Query: 270 AGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAA---------VREVDVVG--VF 317
            G       A+ A    G++ ++G    ++    L+P            +   V G  + 
Sbjct: 239 VG-GAMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLN 297

Query: 318 RYKNTWPLCLE----LLRSGKIDVK------PLVTHRFGFSQKEVEEAFETSARGGTAIK 367
            Y + +   +     +  SG +  +             G     +  A      G    K
Sbjct: 298 HYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLES--IFRAVNYMYMGKNTGK 355

Query: 368 VM 369
           ++
Sbjct: 356 IV 357

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 56/303 (18%), Positives = 105/303 (34%), Gaps = 63/303 (20%)

Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKE-PMVIGHECAGV 84
           T  +Q   +  L   DVLVR+       S V+Y   L       +VK  P V G + AGV
Sbjct: 17  TAGVQTISMDDLPEGDVLVRVHY-----SSVNYKDGLASIPDGKIVKTYPFVPGIDLAGV 71

Query: 85  IEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
           +    S+      GD V +  G  +    G++ +                         G
Sbjct: 72  VVS--SQHPRFREGDEV-IATGYEI----GVTHF-------------------------G 99

Query: 145 SLANQVVHPADLCFKLPDNVSLEE----GAMCEPLSVGVHACRRANIGPETNVLIMGAGP 200
             +       +    LP  ++L+E    G      ++ +H      + PE   +++    
Sbjct: 100 GYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGAT 159

Query: 201 --IGLVTMLAARAFGAPRIVIV---DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 255
             +G + +      G             DY     + +GA  ++          + + + 
Sbjct: 160 GGVGSLAVSMLAKRGYTVEASTGKAAEHDY----LRVLGAKEVL-------AREDVMAER 208

Query: 256 QKAMGTGI-DVSFDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAAVREVDV 313
            + +       + D  G  +T++T L     GG V + G+ G  E+   + P  +R V +
Sbjct: 209 IRPLDKQRWAAAVDPVG-GRTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSL 267

Query: 314 VGV 316
           +G+
Sbjct: 268 LGI 270

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 59/300 (19%), Positives = 111/300 (37%), Gaps = 57/300 (19%)

Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKE-PMVIGHECAGV 84
           ++ ++      L    VL+++       S ++Y   L       +V+E P+++G + AG 
Sbjct: 18  SVHVKTISTEDLPKDGVLIKVAY-----SGINYKDGLAGKAGGNIVREYPLILGIDAAGT 72

Query: 85  IEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
           +    S       GD V +     +    G+S                           G
Sbjct: 73  VVS--SNDPRFAEGDEV-IATSYEL----GVSRD-------------------------G 100

Query: 145 SLANQVVHPADLCFKLPDNVSLEE----GAMCEPLSVGVHACRRANIGPE-TNVLIMGA- 198
            L+     P D    LP N+SL+E    G      ++ VH   +  + PE  +VL+ GA 
Sbjct: 101 GLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGAT 160

Query: 199 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 258
           G +G + +      G   +     +       K++GA  ++          +  +   KA
Sbjct: 161 GGVGGIAVSMLNKRGYDVVAST-GNREAADYLKQLGASEVI-------SREDVYDGTLKA 212

Query: 259 MGTGI-DVSFDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAAVREVDVVGV 316
           +       + D  G  K +++ L     GG V + G+ G  E+   + P  +R V ++G+
Sbjct: 213 LSKQQWQGAVDPVG-GKQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGI 271

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 46.0 bits (109), Expect = 2e-05
 Identities = 58/359 (16%), Positives = 105/359 (29%), Gaps = 84/359 (23%)

Query: 35   ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
                    D L  +    +   DV  +         +    + G                
Sbjct: 1553 YALPASCQDRLCSVYYTSLNFRDV--MLATG----KLSPDSIPGKWLTRDCMLGMEFSGR 1606

Query: 95   LVPGDRVT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP 153
               G RV  +VP                                        LA  V+  
Sbjct: 1607 DASGRRVMGMVPA-------------------------------------EGLATSVLLL 1629

Query: 154  ADLCFKLPDNVSLEEGAMCEPLSVGV------HA-CRRANIGPETNVLI-MGAGPIGLVT 205
                +++P   +LEE A     SV +      ++   R  + P  +VLI  G+G +G   
Sbjct: 1630 QHATWEVPSTWTLEEAA-----SVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAA 1684

Query: 206  MLAARAFGAPRIVIVDVD---DYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 262
            +  A + G      V       Y  +   ++          N +D + E   ++   G G
Sbjct: 1685 IAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFA----NSRDTSFEQHVLRHTAGKG 1740

Query: 263  IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG--------HHEMTVPLTPAAVREVDVV 314
            +D+  +     + +  ++      G    + +G           M V L       + + 
Sbjct: 1741 VDLVLNSLA-EEKLQASVRCLAQHG--RFLEIGKFDLSNNHALGMAVFLKNVTFHGILLD 1797

Query: 315  GVF-----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 368
             +F      ++    L    ++ G   V+PL    F  +  +VE AF   A+G    KV
Sbjct: 1798 SLFEEGGATWQEVSELLKAGIQEGV--VQPLKCTVFPRT--KVEAAFRYMAQGKHIGKV 1852

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 42.7 bits (101), Expect = 9e-05
 Identities = 62/313 (19%), Positives = 103/313 (32%), Gaps = 63/313 (20%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVK 72
           M A +L    G     +Q  E   L   DV V +       S ++Y   L       +++
Sbjct: 1   MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHW-----SSLNYKDALAITGKGKIIR 55

Query: 73  E-PMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLC 131
             PM+ G + AG +    SE      G  V L+ G  V    G + W             
Sbjct: 56  HFPMIPGIDFAGTVHA--SEDPRFHAGQEV-LLTGWGV----GENHW------------- 95

Query: 132 PEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE----GAMCEPLSVGVHACRRANI 187
                       G LA +     D    LP  +S       G       + V A   A I
Sbjct: 96  ------------GGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGI 143

Query: 188 GPETNVLIMGAGP--IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL 245
            P+   +++      +G   +      G     +   +       K +GA+ I+    + 
Sbjct: 144 RPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTH-GYLKSLGANRIL----SR 198

Query: 246 QDIAEEVEKIQKAMGTGI-DVSFDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPL 303
            + AE      + +   +   + D  G +K ++  L     GG V   G+ G   +   +
Sbjct: 199 DEFAES-----RPLEKQLWAGAIDTVG-DKVLAKVLAQMNYGGCVAACGLAGGFALPTTV 252

Query: 304 TPAAVREVDVVGV 316
            P  +R V + GV
Sbjct: 253 MPFILRNVRLQGV 265

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* Length = 298

 Score = 41.7 bits (97), Expect = 2e-04
 Identities = 10/58 (17%), Positives = 27/58 (46%), Gaps = 5/58 (8%)

Query: 185 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GADNI 238
                    + +G GP+ L  +L +  +G  R+ +V+++     +++++    G D +
Sbjct: 118 GRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGV 174

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} Length = 480

 Score = 40.0 bits (93), Expect = 9e-04
 Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 4/80 (5%)

Query: 192 NVLIMGAGPIGLVTM-LAAR--AFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 248
             +I+G G +G   M L          ++ I+  +  ++ VA++ G    ++  T  Q+ 
Sbjct: 15  RFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITP-QNY 73

Query: 249 AEEVEKIQKAMGTGIDVSFD 268
            E +    +     IDVS  
Sbjct: 74  LEVIGSTLEENDFLIDVSIG 93

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	372
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.97
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.83
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	99.01
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.88
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.79
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.54
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.51
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.49
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.42
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.38
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.11
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.02
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	97.97
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	97.95
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.95
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.95
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.94
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.75
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.74
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.73
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.59
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.54
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.51
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.48
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.35
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.33
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.33
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.32
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.31
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.28
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.19
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.17
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	97.15
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.14
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.12
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.11
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.08
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.08
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.07
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.06
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.05
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.03
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.02
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	97.02
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	97.01
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.99
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	96.94
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.94
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	96.94
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	96.91
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.9
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.88
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.88
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.87
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.86
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	96.85
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	96.85
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	96.85
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.83
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.81
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.78
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.77
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.77
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	96.77
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	96.76
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.75
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.75
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.75
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	96.75
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.75
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.74
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	96.74
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.74
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.74
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	96.74
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	96.73
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	96.73
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	96.73
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	96.73
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.72
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.72
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.71
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	96.71
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.71
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.71
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.7
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.7
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	96.7
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.69
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.69
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.68
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.68
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.68
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.67
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	96.67
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.67
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.66
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.66
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.66
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.66
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.65
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.65
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.65
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	96.64
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	96.64
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.63
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	96.63
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	96.61
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.61
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.6
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	96.6
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	96.6
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.6
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.6
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.59
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.57
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.56
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	96.56
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.55
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.55
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	96.55
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	96.54
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.54
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	96.53
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.53
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.53
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	96.53
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	96.52
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.52
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	96.52
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.52
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.51
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	96.51
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	96.51
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	96.51
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	96.51
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.5
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.49
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	96.49
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.48
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.47
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	96.47
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	96.47
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.47
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	96.47
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	96.46
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.46
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	96.45
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.44
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.44
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.44
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.43
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	96.42
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.42
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.41
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	96.41
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.4
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	96.4
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.39
1xq1_A	266	Putative tropinone reducatse; structural genomics,	96.39
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.38
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	96.38
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	96.37
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	96.37
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.37
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	96.37
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.36
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	96.35
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	96.35
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	96.35
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.35
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	96.34
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	96.34
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	96.33
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	96.33
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	96.33
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	96.33
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	96.33
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.32
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	96.32
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.32
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.31
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	96.31
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.31
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.3
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	96.3
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	96.29
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	96.28
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.28
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	96.28
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.27
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.27
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.27
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	96.26
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.26
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.26
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.26
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	96.26
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	96.25
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	96.25
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.24
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	96.23
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	96.23
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.23
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.23
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.22
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.21
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.21
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	96.2
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	96.2
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.19
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.18
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.18
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.17
1xhl_A	297	Short-chain dehydrogenase/reductase family member	96.17
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.17
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	96.16
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	96.16
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	96.14
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	96.13
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	96.12
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	96.12
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	96.12
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	96.12
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.12
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	96.11
1spx_A	278	Short-chain reductase family member (5L265); paral	96.1
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	96.09
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.09
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.09
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	96.09
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.08
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.07
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.05
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.05
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.05
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.05
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.04
4had_A	350	Probable oxidoreductase protein; structural genomi	96.03
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	96.02
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.02
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	96.01
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	96.01
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	96.01
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	96.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	95.99
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	95.99
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	95.98
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	95.98
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	95.97
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	95.95
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	95.94
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	95.94
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	95.93
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	95.91
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	95.91
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	95.91
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	95.91
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	95.9
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	95.9
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	95.9
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	95.89
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.87
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.87
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	95.86
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	95.86
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	95.85
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	95.85
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	95.84
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	95.8
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	95.8
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	95.8
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	95.8
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	95.79
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	95.77
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	95.76
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	95.76
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.75
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	95.75
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	95.75
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	95.74
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	95.74
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	95.73
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	95.72
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	95.71
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	95.7
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	95.7
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	95.7
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	95.7
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	95.69
4gqa_A	412	NAD binding oxidoreductase; structural genomics, P	95.68
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	95.68
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	95.67
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	95.67
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	95.65
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.63
2i7c_A	283	Spermidine synthase; transferase, structural genom	95.61
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	95.61
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	95.6
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	95.6
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	95.59
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	95.59
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	95.58
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	95.58
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	95.57
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	95.57
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	95.56
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	95.56
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	95.56
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	95.56
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	95.54
2o07_A	304	Spermidine synthase; structural genomics, structur	95.54
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.54
1xq6_A	253	Unknown protein; structural genomics, protein stru	95.54
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	95.53
1inl_A	296	Spermidine synthase; beta-barrel, rossman fold, st	95.53
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	95.52
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.52
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	95.51
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	95.5
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	95.49
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	95.47
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.45
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	95.44
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	95.42
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	95.42
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	95.41
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	95.41
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	95.37
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	95.34
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	95.33
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	95.32
1id1_A	153	Putative potassium channel protein; RCK domain, E.	95.31
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	95.3
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	95.29
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	95.29
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	95.29
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	95.29
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	95.26
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	95.25
4h3v_A	390	Oxidoreductase domain protein; structural genomics	95.23
3sm3_A	235	SAM-dependent methyltransferases; NESG, structural	95.23
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	95.22
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	95.22
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	95.2
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	95.19
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	95.18
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	95.16
2pt6_A	321	Spermidine synthase; transferase, structural genom	95.16
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	95.15
1u2z_A	433	Histone-lysine N-methyltransferase, H3 lysine-79 s	95.15
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	95.14
1zh8_A	340	Oxidoreductase; TM0312, structural genomics, JO ce	95.12
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	95.1
1xxl_A	239	YCGJ protein; structural genomics, protein structu	95.09
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	95.08
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	95.07
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	95.04
1ixk_A	315	Methyltransferase; open beta sheet; 1.90A {Pyrococ	95.03
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	95.01
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	95.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	94.99
1uir_A	314	Polyamine aminopropyltransferase; spermidien synth	94.98
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	94.96
3f4k_A	257	Putative methyltransferase; structural genomics, P	94.96
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	94.95
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	94.94
3g5t_A	299	Trans-aconitate 3-methyltransferase; structural ge	94.9
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	94.89
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	94.88
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	94.86
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	94.85
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	94.85
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	94.83
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	94.82
3ajd_A	274	Putative methyltransferase MJ0026; tRNA, M5C, ross	94.82
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	94.8
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	94.8
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	94.79
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	94.78
2yxl_A	450	PH0851 protein, 450AA long hypothetical FMU protei	94.78
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	94.78
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	94.78
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	94.76
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	94.76
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	94.72
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	94.71
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	94.71
2p35_A	259	Trans-aconitate 2-methyltransferase; SAM dependent	94.69
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	94.67
1nt2_A	210	Fibrillarin-like PRE-rRNA processing protein; adeM	94.67
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	94.66
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	94.65
1yzh_A	214	TRNA (guanine-N(7)-)-methyltransferase; alpha-beta	94.62
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	94.61
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	94.59
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	94.58
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	94.56
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	94.55
3id6_C	232	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	94.54
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	94.53
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	94.53
2fca_A	213	TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bac	94.53
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	94.52
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	94.52
1dus_A	194	MJ0882; hypothetical protein, methanococcus jannas	94.52
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	94.49
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	94.49
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	94.45
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	94.43
2a9f_A	398	Putative malic enzyme ((S)-malate:NAD+ oxidoreduct	94.43
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	94.42
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	94.4
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	94.38
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	94.37
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	94.31
3o4f_A	294	Spermidine synthase; aminopropyltransferase, polya	94.3
3ec7_A	357	Putative dehydrogenase; alpha-beta, structural gen	94.29
3g07_A	292	7SK snRNA methylphosphate capping enzyme; structur	94.28
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	94.25
2frx_A	479	Hypothetical protein YEBU; rossmann-type S-adenosy	94.25
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	94.25
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	94.23
2yqz_A	263	Hypothetical protein TTHA0223; RNA methyltransfera	94.2
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	94.2
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	94.19
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	94.19
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	94.17
3i23_A	349	Oxidoreductase, GFO/IDH/MOCA family; structural ge	94.16

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=6.7e-59  Score=436.39  Aligned_cols=345  Identities=40%  Similarity=0.653  Sum_probs=310.4

Q ss_pred             chhcceeEEEecCCceeEEEecCC--------CCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEE
Q 017426           14 GEEVNMAAWLLGVNTLKIQPFELP--------SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI   85 (372)
Q Consensus        14 ~~~~~~~~~~~~~~~l~~~~~~~p--------~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V   85 (372)
                      ++++||++++.+++.+++.++|.|        +|+++||+|||+++|+|++|++++.+...+....++|.++|||++|+|
T Consensus         5 ~~~~mka~~~~~~~~l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G~V   84 (363)
T 3m6i_A            5 ASKTNIGVFTNPQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEV   84 (363)
T ss_dssp             CCSCCEEEEECTTCCEEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEEEE
T ss_pred             CcccceeEEEeCCCcEEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEEEE
Confidence            556799999999999999999999        999999999999999999999998864434444577999999999999


Q ss_pred             EEecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCC
Q 017426           86 EKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVS  165 (372)
Q Consensus        86 ~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~  165 (372)
                      +++|++|++|++        ||||++.+..+|+.|++|..+++++|++..+++....+|+|+||+.+|+++++++|+ ++
T Consensus        85 ~~vG~~v~~~~v--------GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-~s  155 (363)
T 3m6i_A           85 IAVHPSVKSIKV--------GDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MS  155 (363)
T ss_dssp             EEECTTCCSCCT--------TCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-CC
T ss_pred             EEECCCCCCCCC--------CCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-CC
Confidence            999999999999        999999999999999999999999999999888777899999999999999999999 99


Q ss_pred             cccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCC--
Q 017426          166 LEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST--  243 (372)
Q Consensus       166 ~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~--  243 (372)
                      +++|+++.+++|||++++.+++++|++|||+|+|++|++++|+|+.+|++.|++++++++|.++++++ ++.++++..  
T Consensus       156 ~~~aa~~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~  234 (363)
T 3m6i_A          156 YENGAMLEPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKVER  234 (363)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEECCS
T ss_pred             HHHHHhhhHHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccccccc
Confidence            99999888899999999889999999999999999999999999999997689999999999999999 766665532  


Q ss_pred             -CcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccCCCc
Q 017426          244 -NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT  322 (372)
Q Consensus       244 -~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  322 (372)
                       ..+++.+.+++++  .+.++|++||++|++..++.++++|+++|+++.+|.......++...+..+++++.++..+.+.
T Consensus       235 ~~~~~~~~~v~~~t--~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  312 (363)
T 3m6i_A          235 LSAEESAKKIVESF--GGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRYCNT  312 (363)
T ss_dssp             CCHHHHHHHHHHHT--SSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCCCCHHHHHHHTCEEEECCSCSSC
T ss_pred             cchHHHHHHHHHHh--CCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCccccHHHHHhcCcEEEEccCCHHH
Confidence             2356777776654  3678999999999987899999999999999999976666667777888999999999877889


Q ss_pred             HHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcC-CCceEEEEeC
Q 017426          323 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFNL  372 (372)
Q Consensus       323 ~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~-~~~gkvvv~~  372 (372)
                      ++++++++++|++.+.+.++++|++  +++++|++.+.++ ...+|+|+++
T Consensus       313 ~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~Kvvi~~  361 (363)
T 3m6i_A          313 WPRAIRLVENGLVDLTRLVTHRFPL--EDALKAFETASDPKTGAIKVQIQS  361 (363)
T ss_dssp             HHHHHHHHHTTSSCCGGGEEEEEEG--GGHHHHHHHHHCGGGCCSEEEEEC
T ss_pred             HHHHHHHHHhCCCChHHceeeeeeH--HHHHHHHHHHhccCCCeEEEEEec
Confidence            9999999999999888889999999  9999999999987 6788999874

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.4e-58  Score=427.43  Aligned_cols=346  Identities=49%  Similarity=0.836  Sum_probs=303.6

Q ss_pred             hhcceeEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           15 EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        15 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      +++||++++.+++.+++.++|.|+|+++||+|||+++|+|++|++.+.+.........+|.++|||++|+|+++|++|++
T Consensus         2 ~~~mka~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   81 (352)
T 1e3j_A            2 ASDNLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKH   81 (352)
T ss_dssp             --CCEEEEEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCS
T ss_pred             cccCEEEEEEcCCcEEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCCC
Confidence            34689999999999999999999999999999999999999999988753222222357999999999999999999999


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccch
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEP  174 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~  174 (372)
                      |++        ||||++.+..+|+.|++|..+++++|++..+++....+|+|+||+.+|+++++++|+++++++|+++.+
T Consensus        82 ~~v--------GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~  153 (352)
T 1e3j_A           82 LKK--------GDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEP  153 (352)
T ss_dssp             CCT--------TCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTHHH
T ss_pred             CCC--------CCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhhch
Confidence            999        999999999999999999999999999988877655689999999999999999999999999998888


Q ss_pred             hHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHH
Q 017426          175 LSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       175 ~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~  254 (372)
                      +++||++++.+++++|++|||+|+|++|++++|+|+.+|++ |+++++++++.++++++|++.++++++ ..++.+.+++
T Consensus       154 ~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~-Vi~~~~~~~~~~~~~~lGa~~~~~~~~-~~~~~~~i~~  231 (352)
T 1e3j_A          154 LSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKNCGADVTLVVDP-AKEEESSIIE  231 (352)
T ss_dssp             HHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHTTCSEEEECCT-TTSCHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHhCCCEEEcCcc-cccHHHHHHH
Confidence            89999999889999999999999999999999999999995 899999999999999999998887642 1456666665


Q ss_pred             HHHH-cCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccCCCcHHHHHHHHHcC
Q 017426          255 IQKA-MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSG  333 (372)
Q Consensus       255 ~~~~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ll~~g  333 (372)
                      .+.. .+.++|++||++|++..++.++++|+++|+++.+|.......++...+..+++++.++..+.++++++++++++|
T Consensus       232 ~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g  311 (352)
T 1e3j_A          232 RIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASG  311 (352)
T ss_dssp             HHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCSSCHHHHHHHHHTT
T ss_pred             HhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccccHHHHHhcCcEEEEeccchHHHHHHHHHHHcC
Confidence            5310 146899999999987788999999999999999987554455666778889999999887778899999999999


Q ss_pred             CCCCCCceEEEecCChHHHHHHHHHHhcCC-CceEEEEeC
Q 017426          334 KIDVKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL  372 (372)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~-~~gkvvv~~  372 (372)
                      ++.+.+.++++|++  +++++|++.+.+++ ..+|+|+++
T Consensus       312 ~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~Kvvi~~  349 (352)
T 1e3j_A          312 RCNVKQLVTHSFKL--EQTVDAFEAARKKADNTIKVMISC  349 (352)
T ss_dssp             SCCCGGGEEEEEEG--GGHHHHHHHHHHCCTTCSEEEEEC
T ss_pred             CCChHHheeEEecH--HHHHHHHHHHhcCCCCceEEEEec
Confidence            98778889999999  99999999999887 689999875

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=9.1e-58  Score=427.36  Aligned_cols=343  Identities=50%  Similarity=0.863  Sum_probs=304.2

Q ss_pred             hcceeEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccc
Q 017426           16 EVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (372)
Q Consensus        16 ~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (372)
                      ++||++++.+++.+++.++|.|+|+++||+|||.++|+|++|++.+.|.........+|.++|||++|+|+++|++|++|
T Consensus         6 ~~mka~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~~~   85 (356)
T 1pl8_A            6 PNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHL   85 (356)
T ss_dssp             CCCEEEEEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSC
T ss_pred             cCceEEEEecCCcEEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCCCC
Confidence            45899999998999999999999999999999999999999999888532222223579999999999999999999999


Q ss_pred             cccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccchh
Q 017426           96 VPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL  175 (372)
Q Consensus        96 ~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~  175 (372)
                      ++        ||||++.+..+|+.|++|..++.++|++...++....+|+|+||+.+|++.++++|+++++++|+++.++
T Consensus        86 ~v--------GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~~~~  157 (356)
T 1pl8_A           86 KP--------GDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPL  157 (356)
T ss_dssp             CT--------TCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHHHHH
T ss_pred             CC--------CCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhhchH
Confidence            99        9999999999999999999999999999887776556899999999999999999999999999988788


Q ss_pred             HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCC-cccHHHHHHH
Q 017426          176 SVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-LQDIAEEVEK  254 (372)
Q Consensus       176 ~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~-~~~~~~~~~~  254 (372)
                      ++||++++.+++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|++.+++++.. ..++.+.+++
T Consensus       158 ~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~  237 (356)
T 1pl8_A          158 SVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEG  237 (356)
T ss_dssp             HHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHH
Confidence            999999988999999999999999999999999999999779999999999999999999998876421 2456666665


Q ss_pred             HHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccCCCcHHHHHHHHHcCC
Q 017426          255 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGK  334 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ll~~g~  334 (372)
                      .+   +.++|+|||++|++..++.++++|+++|+++.+|.......++...+..+++++.++..+.+.++++++++++|+
T Consensus       238 ~~---~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~  314 (356)
T 1pl8_A          238 QL---GCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKS  314 (356)
T ss_dssp             HH---TSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSCSSCHHHHHHHHHTTS
T ss_pred             Hh---CCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHhcceEEEEecccHHHHHHHHHHHHcCC
Confidence            53   368999999999887889999999999999999875544556667788899999998877788999999999999


Q ss_pred             CCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          335 IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +.+.+.++++|++  +++++|++.+.++ ..+|+|+++
T Consensus       315 i~~~~~i~~~~~l--~~~~~A~~~~~~~-~~gKvvi~~  349 (356)
T 1pl8_A          315 VNVKPLVTHRFPL--EKALEAFETFKKG-LGLKIMLKC  349 (356)
T ss_dssp             CCCGGGEEEEEEG--GGHHHHHHHHHTT-CCSEEEEEC
T ss_pred             CChHHheEEEecH--HHHHHHHHHHhCC-CceEEEEeC
Confidence            8778889999999  9999999999988 889999874

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=3.4e-58  Score=431.98  Aligned_cols=351  Identities=29%  Similarity=0.534  Sum_probs=306.4

Q ss_pred             CCCc-cccccchhcceeEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeE
Q 017426            5 GMSQ-GEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAG   83 (372)
Q Consensus         5 ~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G   83 (372)
                      ++++ .....++.+||++++.+++.+++.++|.|+|+++||+|||.++|+|++|++++.|.+    ...+|.++|||++|
T Consensus        10 ~~~~~~~~~~~p~~mkA~v~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~----~~~~p~v~G~e~~G   85 (370)
T 4ej6_A           10 GVDLGTENLYFQSMMKAVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEF----PSTPPVTLGHEFCG   85 (370)
T ss_dssp             -----------CCEEEEEEEEETTEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSS----CCCSSEECCCSEEE
T ss_pred             cccccccccccchheEEEEEecCCceEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCC----CCCCCeecCcceEE
Confidence            3444 344457788999999999999999999999999999999999999999999998754    24679999999999


Q ss_pred             EEEEecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCC
Q 017426           84 VIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN  163 (372)
Q Consensus        84 ~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~  163 (372)
                      +|+++|++|++|++        ||||++.+..+|+.|++|..++.++|++...++. ..+|+|+||+.+|++.++++|++
T Consensus        86 ~V~~vG~~v~~~~v--------GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~~P~~  156 (370)
T 4ej6_A           86 IVVEAGSAVRDIAP--------GARITGDPNISCGRCPQCQAGRVNLCRNLRAIGI-HRDGGFAEYVLVPRKQAFEIPLT  156 (370)
T ss_dssp             EEEEECTTCCSSCT--------TCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGEEEECTT
T ss_pred             EEEEECCCCCCCCC--------CCEEEECCCCCCCCChHHhCcCcccCCCccccCC-CCCCcceEEEEEchhhEEECCCC
Confidence            99999999999999        9999999999999999999999999999988876 47899999999999999999999


Q ss_pred             CCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCC
Q 017426          164 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  243 (372)
Q Consensus       164 ~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~  243 (372)
                      +++++|++..++++||++++.+++++|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++.++++..
T Consensus       157 ~~~~~aal~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~  236 (370)
T 4ej6_A          157 LDPVHGAFCEPLACCLHGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSA  236 (370)
T ss_dssp             SCTTGGGGHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTS
T ss_pred             CCHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCC
Confidence            99999997778999999998899999999999999999999999999999988999999999999999999999987643


Q ss_pred             CcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC--CccccchhhhccCcEEEeeccCCC
Q 017426          244 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVPLTPAAVREVDVVGVFRYKN  321 (372)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~~  321 (372)
                        +++.+.+++.....++++|+|||++|+...+..++++|+++|+++.+|....  ...++...+..+++++.++..+..
T Consensus       237 --~~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  314 (370)
T 4ej6_A          237 --GDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPF  314 (370)
T ss_dssp             --SCHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCTT
T ss_pred             --cCHHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccChH
Confidence              6777776652111234999999999987889999999999999999986554  446677778899999999988888


Q ss_pred             cHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCC-CceEEEEeC
Q 017426          322 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL  372 (372)
Q Consensus       322 ~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~-~~gkvvv~~  372 (372)
                      .++++++++++|++.+.++++++|++  +++++|++.+.++. ..+|+++++
T Consensus       315 ~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~kvv~~~  364 (370)
T 4ej6_A          315 VHRRAADLVATGAIEIDRMISRRISL--DEAPDVISNPAAAGEVKVLVIPSA  364 (370)
T ss_dssp             CHHHHHHHHHTTCSCCGGGEEEEECG--GGHHHHHHSCCCTTCSEEEECCC-
T ss_pred             HHHHHHHHHHcCCCChhHcEEEEEEH--HHHHHHHHHHHcCCCCeEEEEEcc
Confidence            89999999999999888899999999  99999999998775 557887753

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=9.2e-57  Score=419.37  Aligned_cols=335  Identities=28%  Similarity=0.478  Sum_probs=301.6

Q ss_pred             ceeEEEecCCceeEEEecCCC-CCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGVNTLKIQPFELPS-LGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~-~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      |||+++.+++.+++.++|.|+ ++|+||||||+++|+|++|++.+.|...    ..+|.++|||++|+|+++|++|++|+
T Consensus         1 MkAvv~~~~g~l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~----~~~P~i~G~E~~G~V~~vG~~V~~~~   76 (346)
T 4a2c_A            1 MKSVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGA----HYYPITLGHEFSGYIDAVGSGVDDLH   76 (346)
T ss_dssp             CEEEEECSSSCEEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCS----SSSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             CCEEEEecCCCEEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCC----CCCCccccEEEEEEEEEECCCccccc
Confidence            799999999999999999998 5799999999999999999998887432    46799999999999999999999999


Q ss_pred             ccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccchhH
Q 017426           97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS  176 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~  176 (372)
                      +        ||||.+.+...|+.|.+|..+..++|.+...++. ..+|+|+||+.+|+++++++|+++++++||++++++
T Consensus        77 ~--------GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~  147 (346)
T 4a2c_A           77 P--------GDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGS-RRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPIT  147 (346)
T ss_dssp             T--------TCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTT-TBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHHHHH
T ss_pred             C--------CCeEEeeeccCCCCcccccCCccccCCCcccccC-CCCcccccccccchheEEECCCCCCHHHHHhchHHH
Confidence            9        9999999999999999999999999999888875 578999999999999999999999999999988888


Q ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHH
Q 017426          177 VGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       177 ~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~  256 (372)
                      +++++++..++++|++|||+|+|++|++++|+|+.+|+.++++++++++|.++++++|++.++++.+  .++.+.+++++
T Consensus       148 ~~~~~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~--~~~~~~~~~~~  225 (346)
T 4a2c_A          148 VGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE--MSAPQMQSVLR  225 (346)
T ss_dssp             HHHHHHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTT--SCHHHHHHHHG
T ss_pred             HHHHHHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCC--CCHHHHHHhhc
Confidence            8888888999999999999999999999999999999988899999999999999999999998754  56666666654


Q ss_pred             HHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCc---cccchhhhccCcEEEeeccC------CCcHHHHH
Q 017426          257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM---TVPLTPAAVREVDVVGVFRY------KNTWPLCL  327 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~---~~~~~~~~~~~~~i~~~~~~------~~~~~~~~  327 (372)
                        .+.++|++||++|++..++.++++++++|+++.+|......   ..+...+..+++++.|++..      .+++++++
T Consensus       226 --~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~  303 (346)
T 4a2c_A          226 --ELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETAS  303 (346)
T ss_dssp             --GGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHH
T ss_pred             --ccCCcccccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHH
Confidence              36789999999999889999999999999999998765543   33445577899999997643      45789999


Q ss_pred             HHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          328 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       328 ~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      +++++|++.+.++++++|++  +++++|++.+.+++..||+|+.
T Consensus       304 ~l~~~g~l~~~~lI~~~~~l--~~~~~A~~~l~~~~~~GKvVl~  345 (346)
T 4a2c_A          304 RLLTERKLSLEPLIAHRGSF--ESFAQAVRDIARNAMPGKVLLI  345 (346)
T ss_dssp             HHHHTTCSCCGGGEEEEECH--HHHHHHHHHHTTSCCCSEEEEC
T ss_pred             HHHHcCCCCCCccEeEEEeH--HHHHHHHHHHHcCCCceEEEEE
Confidence            99999999888889999999  9999999999999999999985

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=2.5e-56  Score=416.45  Aligned_cols=340  Identities=31%  Similarity=0.569  Sum_probs=287.0

Q ss_pred             hhcceeEEEecCC-ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhh-cccCCcccCCCcccccceeEEEEEecCCC
Q 017426           15 EEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKT-LRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (372)
Q Consensus        15 ~~~~~~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g-~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (372)
                      +++||++++.+++ .+++.++|.|+|+++||+|||.++|+|++|++.+.| .++. ....+|.++|||++|+|+++|++|
T Consensus         2 m~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~~~p~v~G~E~~G~V~~vG~~v   80 (348)
T 2d8a_A            2 SEKMVAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQ-SRIKPPQIMGHEVAGEVVEIGPGV   80 (348)
T ss_dssp             -CEEEEEEECSSSSSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHH-HHCCSSEECCCEEEEEEEEECTTC
T ss_pred             CCcceEEEEECCCCCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCc-ccCCCCCccCccceEEEEEECCCC
Confidence            4468999999887 899999999999999999999999999999999887 2210 113679999999999999999999


Q ss_pred             ccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccccccc
Q 017426           93 KTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC  172 (372)
Q Consensus        93 ~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~  172 (372)
                      ++|++        ||||++.+..+|++|++|..++.++|++...++. ..+|+|+||+.+|++.++++|+++++++|+++
T Consensus        81 ~~~~v--------GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~  151 (348)
T 2d8a_A           81 EGIEV--------GDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQ  151 (348)
T ss_dssp             CSCCT--------TCEEEECCEECCSCCC------------CEETTT-SSCCSSBSEEEEEGGGEEECCTTSCHHHHTTH
T ss_pred             CcCCC--------CCEEEEcCCCCCCCChhhhCcCcccCCCCCeecC-CCCCcCcceEEeChHHeEECCCCCCHHHHHhh
Confidence            99999        9999999999999999999999999998877664 46799999999999999999999999999988


Q ss_pred             chhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHH
Q 017426          173 EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV  252 (372)
Q Consensus       173 ~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~  252 (372)
                      ++++|||++++.+++ +|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|++.+++++.  +++.+.+
T Consensus       152 ~~~~ta~~~l~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~--~~~~~~v  228 (348)
T 2d8a_A          152 EPLGNAVDTVLAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE--EDVVKEV  228 (348)
T ss_dssp             HHHHHHHHHHTTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTT--SCHHHHH
T ss_pred             hHHHHHHHHHHhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCC--cCHHHHH
Confidence            889999999987889 9999999999999999999999999956888999999999999999998887543  5777777


Q ss_pred             HHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccc-hhhhccCcEEEeeccC--CCcHHHHHHH
Q 017426          253 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPL-TPAAVREVDVVGVFRY--KNTWPLCLEL  329 (372)
Q Consensus       253 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~--~~~~~~~~~l  329 (372)
                      ++++  .+.++|++||++|.+..++.++++|+++|+++.+|.......++. ..+..+++++.++...  .+++++++++
T Consensus       229 ~~~~--~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l  306 (348)
T 2d8a_A          229 MDIT--DGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRL  306 (348)
T ss_dssp             HHHT--TTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHTTTTTCEEEECCCCCSHHHHHHHHHH
T ss_pred             HHHc--CCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCcccCchHHHHhCCcEEEEecCCCcHHHHHHHHHH
Confidence            6653  345899999999987788999999999999999987555445565 6677899999997654  4678999999


Q ss_pred             HHcCCCCCCCceEEEec-CChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          330 LRSGKIDVKPLVTHRFG-FSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       330 l~~g~~~~~~~~~~~~~-~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +++|++.+.+.++++|+ +  +++++|++.+.+ ...+|+|+++
T Consensus       307 ~~~g~i~~~~~i~~~~~gl--~~~~~A~~~~~~-~~~gKvvi~~  347 (348)
T 2d8a_A          307 LQSGKLNLDPIITHKYKGF--DKYEEAFELMRA-GKTGKVVFML  347 (348)
T ss_dssp             HHHTCCCCTTTEEEEEESS--TTHHHHHHHHHT-TCCSEEEEEC
T ss_pred             HHcCCCChHHhheeeCCCH--HHHHHHHHHHhC-CCceEEEEee
Confidence            99999877899999999 9  999999999977 5789999875

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=7.8e-56  Score=417.54  Aligned_cols=342  Identities=23%  Similarity=0.356  Sum_probs=296.1

Q ss_pred             cchhcceeEEEecCCc-eeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCC
Q 017426           13 DGEEVNMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (372)
Q Consensus        13 ~~~~~~~~~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (372)
                      .++.+||++++.+++. +++.++|.|+|+++||+|||+++|+|++|++++.|...   ...+|.++|||++|+|+++|++
T Consensus         4 ~~~~tmkA~v~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~P~v~GhE~~G~V~~vG~~   80 (378)
T 3uko_A            4 GQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEG   80 (378)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCT---TCCSSBCCCCEEEEEEEEECTT
T ss_pred             ccceeeEEEEEecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCC---CCCCCccCCccceEEEEEeCCC
Confidence            3566799999998764 99999999999999999999999999999999988542   2467999999999999999999


Q ss_pred             CccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---cc------------------CCCCCcceeEE
Q 017426           92 VKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT------------------PPVHGSLANQV  150 (372)
Q Consensus        92 v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------------~~~~g~~~e~~  150 (372)
                      |++|++        ||||++.+..+|+.|++|..+++++|++....   |.                  ....|+|+||+
T Consensus        81 v~~~~v--------GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~  152 (378)
T 3uko_A           81 VTEVQA--------GDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYT  152 (378)
T ss_dssp             CCSCCT--------TCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEE
T ss_pred             CCcCCC--------CCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEE
Confidence            999999        99999999999999999999999999987541   11                  11237999999


Q ss_pred             EecCCceEECCCCCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHH
Q 017426          151 VHPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS  228 (372)
Q Consensus       151 ~v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~  228 (372)
                      .+|++.++++|+++++++|++++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|.+
T Consensus       153 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~  232 (378)
T 3uko_A          153 VVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYE  232 (378)
T ss_dssp             EEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHH
T ss_pred             EechhheEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            99999999999999999999987 678999988 5689999999999999999999999999999977999999999999


Q ss_pred             HHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccC-CEEEEEcCCCCCc--cccchh
Q 017426          229 VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEM--TVPLTP  305 (372)
Q Consensus       229 ~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~  305 (372)
                      +++++|++.++++.+...++.+.+++++   ++++|++||++|++..++.++++++++ |+++.+|......  .++...
T Consensus       233 ~a~~lGa~~vi~~~~~~~~~~~~i~~~~---~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~  309 (378)
T 3uko_A          233 TAKKFGVNEFVNPKDHDKPIQEVIVDLT---DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ  309 (378)
T ss_dssp             HHHTTTCCEEECGGGCSSCHHHHHHHHT---TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHH
T ss_pred             HHHHcCCcEEEccccCchhHHHHHHHhc---CCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHH
Confidence            9999999999887644577888887764   349999999999988999999999996 9999999754332  333333


Q ss_pred             hhccCcEEEeeccC----CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          306 AAVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       306 ~~~~~~~i~~~~~~----~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +. +++++.++...    .++++++++++++|.+.+.++++++|++  +++++|++.+.+++.. |+|+++
T Consensus       310 ~~-~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~g~~~-Kvvi~~  376 (378)
T 3uko_A          310 LV-TGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTL--GEINKAFDLLHEGTCL-RCVLDT  376 (378)
T ss_dssp             HH-TTCEEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEG--GGHHHHHHHTTCTTCS-EEEEET
T ss_pred             Hh-cCcEEEEEEecCCCchHHHHHHHHHHHcCCCChhHheeeEeeH--HHHHHHHHHHHCCCce-EEEEec
Confidence            33 47888887543    4578999999999999878889999999  9999999999988765 999875

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=1.2e-54  Score=408.83  Aligned_cols=338  Identities=23%  Similarity=0.368  Sum_probs=290.8

Q ss_pred             hhcceeEEEecCC-ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCc
Q 017426           15 EEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (372)
Q Consensus        15 ~~~~~~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (372)
                      +++||++++.+++ .+++.++|.|+|+++||+|||+++|+|++|++++.|.+.    ..+|.++|||++|+|+++|++|+
T Consensus         7 p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----~~~P~v~GhE~~G~V~~vG~~v~   82 (373)
T 1p0f_A            7 DITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP----SKFPVILGHEAVGVVESIGAGVT   82 (373)
T ss_dssp             CEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC----CCSSBCCCCCEEEEEEEECTTCC
T ss_pred             cceeEEEEEEcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC----CCCCcccCcCceEEEEEECCCCC
Confidence            4568999998775 699999999999999999999999999999999887542    45799999999999999999999


Q ss_pred             cccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---ccC-----------------CCCCcceeEEEec
Q 017426           94 TLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---ATP-----------------PVHGSLANQVVHP  153 (372)
Q Consensus        94 ~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~g~~~e~~~v~  153 (372)
                      +|++        ||||++.+..+|++|++|..++.++|++....   +..                 ...|+|+||+.+|
T Consensus        83 ~~~v--------GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~  154 (373)
T 1p0f_A           83 CVKP--------GDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVA  154 (373)
T ss_dssp             SCCT--------TCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEE
T ss_pred             ccCC--------CCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEc
Confidence            9999        99999999999999999999999999986532   110                 1359999999999


Q ss_pred             CCceEECCCCCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH
Q 017426          154 ADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK  231 (372)
Q Consensus       154 ~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~  231 (372)
                      ++.++++|++++++ |++++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++
T Consensus       155 ~~~~~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~  233 (373)
T 1p0f_A          155 DIAVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI  233 (373)
T ss_dssp             TTSEEEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred             hhhEEECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence            99999999999999 88886 678999988 4689999999999999999999999999999977899999999999999


Q ss_pred             HhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccC-CEEEEEcCCCC--Cccccchhhhc
Q 017426          232 EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHH--EMTVPLTPAAV  308 (372)
Q Consensus       232 ~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~  308 (372)
                      ++|++.++++.+..+++.+.+++++   ++++|+|||++|++..++.++++|+++ |+++.+|....  ...++...+..
T Consensus       234 ~lGa~~vi~~~~~~~~~~~~i~~~t---~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~  310 (373)
T 1p0f_A          234 ELGATECLNPKDYDKPIYEVICEKT---NGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLT  310 (373)
T ss_dssp             HTTCSEEECGGGCSSCHHHHHHHHT---TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHT
T ss_pred             HcCCcEEEecccccchHHHHHHHHh---CCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhcc
Confidence            9999998876532356777777664   348999999999877899999999999 99999986543  23444445566


Q ss_pred             cCcEEEeeccC---CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          309 REVDVVGVFRY---KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       309 ~~~~i~~~~~~---~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +. ++.++...   .++++++++++++|.+.+.+.++++|++  +++++|++.+.+++. +|+|+++
T Consensus       311 ~~-~i~g~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 1p0f_A          311 GR-SLKGSVFGGFKGEEVSRLVDDYMKKKINVNFLVSTKLTL--DQINKAFELLSSGQG-VRSIMIY  373 (373)
T ss_dssp             TC-EEEECSGGGCCGGGHHHHHHHHHTTSSCGGGGEEEEECG--GGHHHHHHHTTTSSC-SEEEEEC
T ss_pred             Cc-eEEeeccCCcCHHHHHHHHHHHHcCCCCchheEEEEeeH--HHHHHHHHHHHCCCc-ceEEEeC
Confidence            77 88887542   3689999999999999766788999999  999999999988754 7999875

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=1.3e-55  Score=410.90  Aligned_cols=336  Identities=32%  Similarity=0.571  Sum_probs=297.1

Q ss_pred             ceeEEEecCCc-eeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      ||++++.+++. +++.++|.|+|+++||+|||.++|+|++|++++.|.+.......+|.++|||++|+|+++|++|++|+
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2dq4_A            1 MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQ   80 (343)
T ss_dssp             CEEEEECSSSSSCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCSSC
T ss_pred             CeEEEEeCCCCcEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCcCC
Confidence            68888887766 99999999999999999999999999999999987532100145799999999999999999999999


Q ss_pred             ccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccchhH
Q 017426           97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS  176 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~  176 (372)
                      +        ||||++.+..+|+.|++|..++.++|++...++. ..+|+|+||+.+|++.++++|+++++++|+++.+++
T Consensus        81 v--------GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~  151 (343)
T 2dq4_A           81 V--------GDHVSLESHIVCHACPACRTGNYHVCLNTQILGV-DRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFG  151 (343)
T ss_dssp             T--------TCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGEEEECTTSCHHHHTTHHHHH
T ss_pred             C--------CCEEEECCCCCCCCChhhhCcCcccCCCcceecC-CCCCcceeEEEEchHHeEECCCCCCHHHHHhhhHHH
Confidence            9        9999999999999999999999999999887664 467999999999999999999999999999888889


Q ss_pred             HHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHH
Q 017426          177 VGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI  255 (372)
Q Consensus       177 ~a~~~l~-~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~  255 (372)
                      +||++++ .+++ +|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++ ++.++++.+  +++.+.++++
T Consensus       152 ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~--~~~~~~~~~~  227 (343)
T 2dq4_A          152 NAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLE--EDLLEVVRRV  227 (343)
T ss_dssp             HHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTT--SCHHHHHHHH
T ss_pred             HHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCc--cCHHHHHHHh
Confidence            9999998 7889 999999999999999999999999995588999999999999999 998887643  5777777766


Q ss_pred             HHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccc-hhhhccCcEEEeeccC--CCcHHHHHHHHHc
Q 017426          256 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPL-TPAAVREVDVVGVFRY--KNTWPLCLELLRS  332 (372)
Q Consensus       256 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~--~~~~~~~~~ll~~  332 (372)
                      +   +.++|++||++|++..++.++++|+++|+++.+|.......++. ..+..+++++.++..+  .++++++++++++
T Consensus       228 ~---~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~  304 (343)
T 2dq4_A          228 T---GSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYS  304 (343)
T ss_dssp             H---SSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCEEECHHHHTGGGTCEEEECCSCCTTHHHHHHHHHHHH
T ss_pred             c---CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCceeCcHHHHHhCceEEEEeecCCCHHHHHHHHHHHHc
Confidence            4   56899999999987789999999999999999987554455666 6678899999998654  5779999999999


Q ss_pred             CCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          333 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       333 g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      |++.+.+.++++|++  +++++|++.+.+++. +|+|+++
T Consensus       305 g~~~~~~~i~~~~~l--~~~~~A~~~~~~~~~-gKvv~~~  341 (343)
T 2dq4_A          305 GRVDLSPLLTHRLPL--SRYREAFGLLASGQA-VKVILDP  341 (343)
T ss_dssp             TSSCCGGGEEEEEEG--GGHHHHHHHHHHSSC-SEEEEET
T ss_pred             CCCChHHheeEEecH--HHHHHHHHHHhcCCc-eEEEEee
Confidence            998778889999999  999999999988876 9999875

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.6e-55  Score=411.43  Aligned_cols=336  Identities=26%  Similarity=0.416  Sum_probs=291.7

Q ss_pred             hhcceeEEEecCC-ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCc
Q 017426           15 EEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (372)
Q Consensus        15 ~~~~~~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (372)
                      +++||++++.+++ .+++.++|.|+|+++||+|||.++|+|++|++++.|.++    ..+|.++|||++|+|+++|++|+
T Consensus         4 ~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----~~~P~v~GhE~~G~V~~vG~~v~   79 (371)
T 1f8f_A            4 LKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP----VPLPAVLGHEGSGIIEAIGPNVT   79 (371)
T ss_dssp             CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC----CCSSBCCCCEEEEEEEEECTTCC
T ss_pred             cccceEEEEcCCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC----CCCCcccCcccceEEEEeCCCCC
Confidence            3568999998765 699999999999999999999999999999999987542    35799999999999999999999


Q ss_pred             cccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc----------------------CCCCCcceeEEE
Q 017426           94 TLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT----------------------PPVHGSLANQVV  151 (372)
Q Consensus        94 ~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~g~~~e~~~  151 (372)
                      +|++        ||||++.+ .+|++|++|..+++++|++...++.                      ....|+|+||+.
T Consensus        80 ~~~~--------GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~  150 (371)
T 1f8f_A           80 ELQV--------GDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYAL  150 (371)
T ss_dssp             SCCT--------TCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEE
T ss_pred             CCCC--------CCEEEecC-CCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEE
Confidence            9999        99999999 9999999999999999987653211                      013599999999


Q ss_pred             ecCCceEECCCCCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHH
Q 017426          152 HPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV  229 (372)
Q Consensus       152 v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~  229 (372)
                      +|++.++++|+++++++|++++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|++.|+++++++++.++
T Consensus       151 v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~  230 (371)
T 1f8f_A          151 SRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLEL  230 (371)
T ss_dssp             EEGGGEEEECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHH
T ss_pred             echhheEECCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence            9999999999999999999887 788999998 56899999999999999999999999999999778999999999999


Q ss_pred             HHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC--Cccccchhhh
Q 017426          230 AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVPLTPAA  307 (372)
Q Consensus       230 ~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~  307 (372)
                      ++++|++.++++..  +++.+.+++++   ++++|+|||++|.+..++.++++|+++|+++.+|....  ...++...+.
T Consensus       231 a~~lGa~~vi~~~~--~~~~~~~~~~~---~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~  305 (371)
T 1f8f_A          231 AKQLGATHVINSKT--QDPVAAIKEIT---DGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLL  305 (371)
T ss_dssp             HHHHTCSEEEETTT--SCHHHHHHHHT---TSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHH
T ss_pred             HHHcCCCEEecCCc--cCHHHHHHHhc---CCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHH
Confidence            99999999887643  57777776653   34899999999987789999999999999999986542  2355556677


Q ss_pred             ccCcEEEeeccC----CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          308 VREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       308 ~~~~~i~~~~~~----~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      .+++++.++...    .++++++++++++|.+.+.+.+++ |++  +++++|++.+.+++. +|+|+++
T Consensus       306 ~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l--~~~~~A~~~~~~~~~-~Kvvv~~  370 (371)
T 1f8f_A          306 LGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAF--DEINQAAIDSRKGIT-LKPIIKI  370 (371)
T ss_dssp             HTTCEEEECSGGGSCHHHHHHHHHHHHHTTSCCGGGGEEE-EEG--GGHHHHHHHHHHTSC-SEEEEEC
T ss_pred             hCCCEEEEeCCCCCchHHHHHHHHHHHHcCCCCcccceeE-ecH--HHHHHHHHHHHCCCc-eEEEEee
Confidence            889999997643    257899999999999976677888 999  999999999988865 7999875

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=1.5e-54  Score=408.57  Aligned_cols=340  Identities=25%  Similarity=0.427  Sum_probs=292.5

Q ss_pred             chhcceeEEEecCC-ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCC
Q 017426           14 GEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (372)
Q Consensus        14 ~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (372)
                      .+++||++++.+++ .+++.++|.|+|+++||+|||+++|+|++|++++.|.    ....+|.++|||++|+|+++|++|
T Consensus         5 ~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~----~~~~~P~v~GhE~~G~V~~vG~~v   80 (376)
T 1e3i_A            5 KVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK----KKALFPVVLGHECAGIVESVGPGV   80 (376)
T ss_dssp             SCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT----SCCCSSBCCCCEEEEEEEEECTTC
T ss_pred             CChheeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC----CCCCCCcccCccccEEEEEECCCC
Confidence            35579999998775 6999999999999999999999999999999998874    124679999999999999999999


Q ss_pred             ccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcc----c---cccC-----------------CCCCccee
Q 017426           93 KTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK----F---FATP-----------------PVHGSLAN  148 (372)
Q Consensus        93 ~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~-----------------~~~g~~~e  148 (372)
                      ++|++        ||||++.+..+|++|++|..++.++|++..    +   .+..                 ...|+|+|
T Consensus        81 ~~~~v--------GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~ae  152 (376)
T 1e3i_A           81 TNFKP--------GDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQ  152 (376)
T ss_dssp             CSCCT--------TCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBS
T ss_pred             ccCCC--------CCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCcccee
Confidence            99999        999999999999999999999999998754    1   0110                 12499999


Q ss_pred             EEEecCCceEECCCCCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhH
Q 017426          149 QVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYR  226 (372)
Q Consensus       149 ~~~v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~  226 (372)
                      |+.+|++.++++|+++++++|++++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++
T Consensus       153 y~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~  232 (376)
T 1e3i_A          153 YTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEK  232 (376)
T ss_dssp             EEEEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGG
T ss_pred             EEEeccccEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHH
Confidence            9999999999999999999999887 688999988 46899999999999999999999999999999778999999999


Q ss_pred             HHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccC-CEEEEEcCCCCCccccchh
Q 017426          227 LSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPLTP  305 (372)
Q Consensus       227 ~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~  305 (372)
                      .++++++|++.++++.+..+++.+.+++++   ++++|+|||++|++..++.++++++++ |+++.+|.......++...
T Consensus       233 ~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~---~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~  309 (376)
T 1e3i_A          233 FPKAKALGATDCLNPRELDKPVQDVITELT---AGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVD  309 (376)
T ss_dssp             HHHHHHTTCSEEECGGGCSSCHHHHHHHHH---TSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHH
T ss_pred             HHHHHHhCCcEEEccccccchHHHHHHHHh---CCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCCccccCHHH
Confidence            999999999998876532356777777764   348999999999877899999999999 9999998743333445555


Q ss_pred             hhccCcEEEeeccC----CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          306 AAVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       306 ~~~~~~~i~~~~~~----~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +..+. ++.++...    .++++++++++++|++.+.+.++++|++  +++++|++.+.+++ .+|+|+++
T Consensus       310 ~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~-~~Kvvi~~  376 (376)
T 1e3i_A          310 VILGR-SINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF--ESINDAIDLMKEGK-SIRTILTF  376 (376)
T ss_dssp             HHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEG--GGHHHHHHHHHTTC-CSEEEEEC
T ss_pred             hhccC-eEEEEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecH--HHHHHHHHHHhcCC-cceEEEeC
Confidence            66677 88887642    3578999999999999777888999999  99999999998875 57999875

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=1.6e-54  Score=403.08  Aligned_cols=333  Identities=26%  Similarity=0.389  Sum_probs=295.9

Q ss_pred             cceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccc
Q 017426           17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (372)
Q Consensus        17 ~~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (372)
                      +||++++.++ .++++.++|.|+|+|+||+|||+++|+|++|++++.|.+..  ...+|.++|||++|+|+++|++|++|
T Consensus         2 ~MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~P~v~G~E~~G~V~~vG~~v~~~   79 (340)
T 3s2e_A            2 MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPV--KPTLPFIPGHEGVGYVSAVGSGVSRV   79 (340)
T ss_dssp             EEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCSEEEEEEEEECSSCCSC
T ss_pred             ceEEEEEecCCCCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCC--CCCCCcccCCcceEEEEEECCCCCcC
Confidence            4788888865 46999999999999999999999999999999999986432  24679999999999999999999999


Q ss_pred             cccccccCCCCCEE-EEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-
Q 017426           96 VPGDRVTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        96 ~~gd~v~~~~Gd~V-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-  173 (372)
                      ++        |||| +..+..+|+.|++|..++.++|++...++. ..+|+|+||+.+|++.++++|+++++++|+.++ 
T Consensus        80 ~v--------GdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  150 (340)
T 3s2e_A           80 KE--------GDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGY-SVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILC  150 (340)
T ss_dssp             CT--------TCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGT
T ss_pred             CC--------CCEEEecCCCCCCCCChHHhCcCcccCccccccCC-CCCCcceeEEEechHHEEECCCCCCHHHhhcccc
Confidence            99        9999 556788999999999999999999887776 578999999999999999999999999999776 


Q ss_pred             hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHH
Q 017426          174 PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE  253 (372)
Q Consensus       174 ~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~  253 (372)
                      .+.|||++++.+++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++.++++++|++.++++.+  +++.+.++
T Consensus       151 ~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~~~~--~~~~~~~~  227 (340)
T 3s2e_A          151 AGVTVYKGLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNARD--TDPAAWLQ  227 (340)
T ss_dssp             HHHHHHHHHHTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEETTT--SCHHHHHH
T ss_pred             hhHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEeCCC--cCHHHHHH
Confidence            67789999988999999999999999999999999999999 7999999999999999999999988654  67777776


Q ss_pred             HHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-CCcHHHHHHHHHc
Q 017426          254 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRS  332 (372)
Q Consensus       254 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~~  332 (372)
                      + +  . +++|++||++|+...++.++++|+++|+++.+|.......++...+..+++++.++... .++++++++++++
T Consensus       228 ~-~--~-g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~  303 (340)
T 3s2e_A          228 K-E--I-GGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDFAAH  303 (340)
T ss_dssp             H-H--H-SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHT
T ss_pred             H-h--C-CCCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCCCCCCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHh
Confidence            6 2  2 48999999999888999999999999999999876665566667788899999998766 5689999999999


Q ss_pred             CCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          333 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       333 g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      |+++  +. .+.|++  +++++|++.+.+++..||+|+++
T Consensus       304 g~l~--~~-~~~~~l--~~~~~A~~~~~~~~~~Gkvvv~~  338 (340)
T 3s2e_A          304 GDVK--AT-VSTAKL--DDVNDVFGRLREGKVEGRVVLDF  338 (340)
T ss_dssp             TSCC--CC-EEEECG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             CCCC--ce-EEEEeH--HHHHHHHHHHHcCCCceEEEEec
Confidence            9994  43 467888  99999999999999999999975

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.3e-55  Score=409.58  Aligned_cols=336  Identities=25%  Similarity=0.412  Sum_probs=288.3

Q ss_pred             chhcceeEEEecCC-ceeEEEecCCC-CCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCC
Q 017426           14 GEEVNMAAWLLGVN-TLKIQPFELPS-LGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (372)
Q Consensus        14 ~~~~~~~~~~~~~~-~l~~~~~~~p~-~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (372)
                      .+.+||++++.+++ .+++.++|.|+ |+++||+|||.++|+|++|++.+.|.+.......+|.++|||++|+|+++|++
T Consensus        12 ~~~~mka~~~~~~g~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~   91 (359)
T 1h2b_A           12 GVERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEG   91 (359)
T ss_dssp             -----CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTT
T ss_pred             ChhhceEEEEecCCCCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECCC
Confidence            45679999998774 79999999999 99999999999999999999999875421011367999999999999999999


Q ss_pred             CccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccccc-
Q 017426           92 VKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA-  170 (372)
Q Consensus        92 v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa-  170 (372)
                      |++|++        ||||++.+..+|+.|++|..++.++|++...++. ..+|+|+||+.+|++.++++|+++++++|+ 
T Consensus        92 v~~~~v--------GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~  162 (359)
T 1h2b_A           92 VEGLEK--------GDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTSHRSVIKLPKDISREKLVE  162 (359)
T ss_dssp             CCSCCT--------TCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTT-TBCCSSBSEEEECGGGEEECCTTCCHHHHHH
T ss_pred             CCCCCC--------CCEEEeCCCCCCCCChhhhCcCcccCCCcccccc-CCCCcccceEEechHhEEECCCCCCHHHHhh
Confidence            999999        9999999999999999999999999998877664 567999999999999999999999999998 


Q ss_pred             --ccc-hhHHHHHHHHh--cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEecChhHHHHHHHhCCCeEEecCCC
Q 017426          171 --MCE-PLSVGVHACRR--ANIGPETNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN  244 (372)
Q Consensus       171 --~~~-~~~~a~~~l~~--~~~~~g~~vlI~Gag~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~  244 (372)
                        .+. .+.|||++++.  +++++|++|||+|+|++|++++|+|+.+ |+ .|+++++++++.++++++|++.++++.+ 
T Consensus       163 ~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-  240 (359)
T 1h2b_A          163 MAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAERLGADHVVDARR-  240 (359)
T ss_dssp             TGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHHHTTCSEEEETTS-
T ss_pred             ccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHHhCCCEEEeccc-
Confidence              444 45689999987  8999999999999999999999999999 99 6899999999999999999999988653 


Q ss_pred             cccHHHHHHHHHHHcCCcceEEEeCCCcHH--HHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-CC
Q 017426          245 LQDIAEEVEKIQKAMGTGIDVSFDCAGLNK--TMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KN  321 (372)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~  321 (372)
                       + +.+.+++++  .+.++|++||++|++.  .+..++++  ++|+++.+|..... .++...+..+++++.++... .+
T Consensus       241 -~-~~~~v~~~~--~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~-~~~~~~~~~~~~~i~g~~~~~~~  313 (359)
T 1h2b_A          241 -D-PVKQVMELT--RGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL-RFPTIRVISSEVSFEGSLVGNYV  313 (359)
T ss_dssp             -C-HHHHHHHHT--TTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC-CCCHHHHHHTTCEEEECCSCCHH
T ss_pred             -h-HHHHHHHHh--CCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC-CCCHHHHHhCCcEEEEecCCCHH
Confidence             3 667776664  2448999999999876  77777777  89999999865544 55566678899999998765 56


Q ss_pred             cHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          322 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       322 ~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +++++++++++|.+  ++.+ ++|++  +++++|++.+.+++..||+|+++
T Consensus       314 ~~~~~~~l~~~g~l--~~~i-~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          314 ELHELVTLALQGKV--RVEV-DIHKL--DEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             HHHHHHHHHHTTSC--CCCE-EEEEG--GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHHHHHHcCCC--cceE-EEEeH--HHHHHHHHHHHcCCCceEEEeeC
Confidence            79999999999998  5667 99999  99999999999988889999875

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.2e-54  Score=405.28  Aligned_cols=340  Identities=23%  Similarity=0.369  Sum_probs=292.4

Q ss_pred             chhcceeEEEecCC-ceeEEEecCCCCCCCcEEEEEeeeeeCcccHH-hhhhcccCCcccCCCcccccceeEEEEEecCC
Q 017426           14 GEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVH-YLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (372)
Q Consensus        14 ~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~-~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (372)
                      .+++||++++.+++ .+++.++|.|+|+++||+|||.++|+|++|++ ++.|..+    ..+|.++|||++|+|+++|++
T Consensus         5 ~~~~mka~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~----~~~P~v~GhE~~G~V~~vG~~   80 (374)
T 1cdo_A            5 KVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK----DGFPVVLGHEGAGIVESVGPG   80 (374)
T ss_dssp             SCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT----TSCSEECCCCEEEEEEEECTT
T ss_pred             CcceeEEEEEecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC----CCCCcccCccceEEEEEECCC
Confidence            44568999988765 69999999999999999999999999999999 8887532    357999999999999999999


Q ss_pred             CccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---ccC-----------------CCCCcceeEEE
Q 017426           92 VKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---ATP-----------------PVHGSLANQVV  151 (372)
Q Consensus        92 v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~g~~~e~~~  151 (372)
                      |++|++        ||||++.+..+|++|++|..++.++|++....   +..                 ...|+|+||+.
T Consensus        81 V~~~~v--------GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~  152 (374)
T 1cdo_A           81 VTEFQP--------GEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTV  152 (374)
T ss_dssp             CCSCCT--------TCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEE
T ss_pred             CccCCC--------CCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEE
Confidence            999999        99999999999999999999999999876542   110                 02599999999


Q ss_pred             ecCCceEECCCCCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHH
Q 017426          152 HPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV  229 (372)
Q Consensus       152 v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~  229 (372)
                      +|++.++++|+++++++|++++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.++
T Consensus       153 v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~  232 (374)
T 1cdo_A          153 VNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEK  232 (374)
T ss_dssp             EEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHH
T ss_pred             EchhheEECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence            9999999999999999999887 678999988 46899999999999999999999999999999778999999999999


Q ss_pred             HHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccC-CEEEEEcCCCC-Cccccchhhh
Q 017426          230 AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHH-EMTVPLTPAA  307 (372)
Q Consensus       230 ~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~  307 (372)
                      ++++|++.++++.+..+++.+.+++++   ++++|++||++|.+..++.++++|+++ |+++.+|.... ...++...+.
T Consensus       233 ~~~lGa~~vi~~~~~~~~~~~~~~~~~---~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~  309 (374)
T 1cdo_A          233 AKVFGATDFVNPNDHSEPISQVLSKMT---NGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLI  309 (374)
T ss_dssp             HHHTTCCEEECGGGCSSCHHHHHHHHH---TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHH
T ss_pred             HHHhCCceEEeccccchhHHHHHHHHh---CCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHh
Confidence            999999998876532356777777765   348999999999877899999999999 99999986543 3344445566


Q ss_pred             ccCcEEEeeccC----CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          308 VREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       308 ~~~~~i~~~~~~----~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      .+. ++.++...    .++++++++++++|++.+.++++++|++  +++++|++.+.+++. +|+|++|
T Consensus       310 ~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~kvvi~~  374 (374)
T 1cdo_A          310 AGR-TWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPL--ESVNDAIDLMKHGKC-IRTVLSL  374 (374)
T ss_dssp             TTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEG--GGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             cCC-eEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeeEecH--HHHHHHHHHHHCCCe-eEEEEeC
Confidence            677 88887543    3578999999999999777888999999  999999999988864 7999875

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=1.8e-54  Score=403.59  Aligned_cols=334  Identities=25%  Similarity=0.399  Sum_probs=292.1

Q ss_pred             ceeEEEecCCc-eeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      ||++++.+++. +++.++|.|+|+++||+|||+++|+|++|++++.|... .....+|.++|||++|+|+++|++|++|+
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   79 (345)
T 3jv7_A            1 MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAA-QYAYGLPLTLGHEGVGTVAELGEGVTGFG   79 (345)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTT-TCCSCSSEECCSEEEEEEEEECTTCCSCC
T ss_pred             CeEEEEcCCCCceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-ccCCCCCcccCcccEEEEEEECCCCCCCC
Confidence            78999998765 99999999999999999999999999999999988543 22256799999999999999999999999


Q ss_pred             ccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc----ccCCCCCcceeEEEec-CCceEECCCCCCcccccc
Q 017426           97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF----ATPPVHGSLANQVVHP-ADLCFKLPDNVSLEEGAM  171 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~e~~~v~-~~~~~~~P~~~~~~~aa~  171 (372)
                      +        ||||++.+..+|+.|++|..++.++|++...+    .....+|+|+||+.+| ++.++++|+ +++++|+.
T Consensus        80 v--------GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~  150 (345)
T 3jv7_A           80 V--------GDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAP  150 (345)
T ss_dssp             T--------TCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGG
T ss_pred             C--------CCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhh
Confidence            9        99999999999999999999999999433222    1234689999999999 899999999 99999997


Q ss_pred             cc-hhHHHHHHHHhc--CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccH
Q 017426          172 CE-PLSVGVHACRRA--NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI  248 (372)
Q Consensus       172 ~~-~~~~a~~~l~~~--~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~  248 (372)
                      ++ ++.|||++++..  ++++|++|||+|+|++|++++|+|+.+|..+|++++++++|.++++++|++.+++++.   ++
T Consensus       151 l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~---~~  227 (345)
T 3jv7_A          151 LTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA---GA  227 (345)
T ss_dssp             GGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST---TH
T ss_pred             hhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC---cH
Confidence            76 788999999875  8999999999999999999999999996558999999999999999999999987642   67


Q ss_pred             HHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC-CccccchhhhccCcEEEeeccC-CCcHHHH
Q 017426          249 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLC  326 (372)
Q Consensus       249 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~  326 (372)
                      .+.+++++  .+.++|++||++|++..++.++++|+++|+++.+|.... ...++. .+..+++++.++... .++++++
T Consensus       228 ~~~v~~~t--~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~  304 (345)
T 3jv7_A          228 ADAIRELT--GGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF-FMIPFGASVVTPYWGTRSELMEV  304 (345)
T ss_dssp             HHHHHHHH--GGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST-TTSCTTCEEECCCSCCHHHHHHH
T ss_pred             HHHHHHHh--CCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH-HHHhCCCEEEEEecCCHHHHHHH
Confidence            77777765  356899999999998799999999999999999987654 445554 677889999998766 5689999


Q ss_pred             HHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          327 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       327 ~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ++++++|.+.  + ++++|++  +++++|++.+.+++..||+|+++
T Consensus       305 ~~l~~~g~l~--~-~~~~~~l--~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          305 VALARAGRLD--I-HTETFTL--DEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             HHHHHTTCCC--C-CEEEECS--TTHHHHHHHHHHTCCSSEEEECC
T ss_pred             HHHHHcCCCc--e-EEEEEcH--HHHHHHHHHHHcCCCceeEEeCC
Confidence            9999999994  3 4589999  99999999999999999999874

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=9.1e-55  Score=406.53  Aligned_cols=337  Identities=26%  Similarity=0.361  Sum_probs=292.4

Q ss_pred             ceeEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHH-hhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVH-YLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~-~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      ||++++.+++.+++.++|.|+|+++||+|||+++|+|++|++ +..|...    ..+|.++|||++|+|+++|++|++|+
T Consensus         1 MkA~~~~~~~~~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~----~~~p~v~G~E~~G~V~~vG~~v~~~~   76 (352)
T 3fpc_A            1 MKGFAMLSIGKVGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG----ERHNMILGHEAVGEVVEVGSEVKDFK   76 (352)
T ss_dssp             CEEEEEEETTEEEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTC----CCSSEECCCEEEEEEEEECTTCCSCC
T ss_pred             CeEEEEccCCCceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCC----CCCCcccCCcceEEEEEECCCCCcCC
Confidence            799999999999999999999999999999999999999999 5566432    46799999999999999999999999


Q ss_pred             ccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--ccCCCCCcceeEEEecCC--ceEECCCCCCccccccc
Q 017426           97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMC  172 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~e~~~v~~~--~~~~~P~~~~~~~aa~~  172 (372)
                      +        ||||++.+..+|+.|++|..++.++|......  .....+|+|+||+.++++  .++++|+++++++|+++
T Consensus        77 v--------GdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~  148 (352)
T 3fpc_A           77 P--------GDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMI  148 (352)
T ss_dssp             T--------TCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTT
T ss_pred             C--------CCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhc
Confidence            9        99999999999999999999999888755321  123468999999999986  89999999999999988


Q ss_pred             c-hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHH
Q 017426          173 E-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE  251 (372)
Q Consensus       173 ~-~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~  251 (372)
                      + +++|||++++.+++++|++|||+|+|++|++++|+|+.+|+..|++++++++|.++++++|++.+++++  ++++.+.
T Consensus       149 ~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~--~~~~~~~  226 (352)
T 3fpc_A          149 PDMMTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYK--NGDIVEQ  226 (352)
T ss_dssp             TTHHHHHHHHHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGG--GSCHHHH
T ss_pred             cchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCC--CcCHHHH
Confidence            5 788999999889999999999999999999999999999997789999999999999999999988764  3678887


Q ss_pred             HHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchh----hhccCcEEEeeccC--CCcHHH
Q 017426          252 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDVVGVFRY--KNTWPL  325 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i~~~~~~--~~~~~~  325 (372)
                      +++++  .+.++|++||++|++..++.++++|+++|+++.+|.......++...    ...+.+++.++...  .+.+++
T Consensus       227 v~~~t--~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  304 (352)
T 3fpc_A          227 ILKAT--DGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMER  304 (352)
T ss_dssp             HHHHT--TTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCHHHHHHH
T ss_pred             HHHHc--CCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCchhHHHH
Confidence            77764  35689999999999778999999999999999998755433333322    33578888887653  457899


Q ss_pred             HHHHHHcCCCCCCCceEEEec-CChHHHHHHHHHHhcCCC-ceEEEEeC
Q 017426          326 CLELLRSGKIDVKPLVTHRFG-FSQKEVEEAFETSARGGT-AIKVMFNL  372 (372)
Q Consensus       326 ~~~ll~~g~~~~~~~~~~~~~-~~~~~~~~A~~~~~~~~~-~gkvvv~~  372 (372)
                      +++++++|.+.+.++++++|+ +  +++++|++.+.++.. .+|+|+++
T Consensus       305 ~~~l~~~g~i~~~~~i~~~~~gl--~~~~~A~~~~~~~~~~~~Kvvi~~  351 (352)
T 3fpc_A          305 LIDLVFYKRVDPSKLVTHVFRGF--DNIEKAFMLMKDKPKDLIKPVVIL  351 (352)
T ss_dssp             HHHHHHTTSCCGGGGEEEEEEST--THHHHHHHHHHSCCTTCSEEEEEC
T ss_pred             HHHHHHcCCCChhHhheeeCCCH--HHHHHHHHHHHhCCCCcEEEEEEe
Confidence            999999999987778999999 9  999999999988644 48999975

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=3e-54  Score=406.20  Aligned_cols=342  Identities=25%  Similarity=0.366  Sum_probs=293.2

Q ss_pred             cchhcceeEEEecCC-ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCC
Q 017426           13 DGEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (372)
Q Consensus        13 ~~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (372)
                      +.|++||++++.+++ .+++.++|.|+|+++||+|||+++|+|++|++++.|..+   ...+|.++|||++|+|+++|++
T Consensus         2 ~~p~~mkA~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~P~v~GhE~~G~V~~vG~~   78 (373)
T 2fzw_A            2 NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP---EGCFPVILGHLGAGIVESVGEG   78 (373)
T ss_dssp             CCCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCT---TCCSSBCCCCEEEEEEEEECTT
T ss_pred             CCccceEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCC---CCCCCccccccccEEEEEECCC
Confidence            345679999998775 699999999999999999999999999999999987542   1357999999999999999999


Q ss_pred             CccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---ccC-----------------CCCCcceeEEE
Q 017426           92 VKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---ATP-----------------PVHGSLANQVV  151 (372)
Q Consensus        92 v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~g~~~e~~~  151 (372)
                      |++|++        ||||++.+..+|++|++|..++.++|++....   +..                 ...|+|+||+.
T Consensus        79 V~~~~v--------GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~  150 (373)
T 2fzw_A           79 VTKLKA--------GDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTV  150 (373)
T ss_dssp             CCSCCT--------TCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEE
T ss_pred             CCCCCC--------CCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEE
Confidence            999999        99999999999999999999999999876431   110                 13599999999


Q ss_pred             ecCCceEECCCCCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHH
Q 017426          152 HPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV  229 (372)
Q Consensus       152 v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~  229 (372)
                      +|++.++++|+++++++|++++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.++
T Consensus       151 v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~  230 (373)
T 2fzw_A          151 VADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFAR  230 (373)
T ss_dssp             EEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHH
T ss_pred             EchhheEECCCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence            9999999999999999999887 678999988 46899999999999999999999999999999778999999999999


Q ss_pred             HHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccC-CEEEEEcCCCC--Cccccchhh
Q 017426          230 AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHH--EMTVPLTPA  306 (372)
Q Consensus       230 ~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~  306 (372)
                      ++++|++.++++.+...++.+.+++++   ++++|++||++|....++.++++|+++ |+++.+|....  ...++...+
T Consensus       231 ~~~lGa~~vi~~~~~~~~~~~~v~~~~---~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~  307 (373)
T 2fzw_A          231 AKEFGATECINPQDFSKPIQEVLIEMT---DGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQL  307 (373)
T ss_dssp             HHHHTCSEEECGGGCSSCHHHHHHHHT---TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHH
T ss_pred             HHHcCCceEeccccccccHHHHHHHHh---CCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHH
Confidence            999999998876532356777777664   348999999999877899999999999 99999986543  234444556


Q ss_pred             hccCcEEEeeccC----CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          307 AVREVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       307 ~~~~~~i~~~~~~----~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ..+. ++.++...    .++++++++++++|.+.+.++++++|++  +++++|++.+.+++. +|+|+++
T Consensus       308 ~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          308 VTGR-TWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSF--DEINKAFELMHSGKS-IRTVVKI  373 (373)
T ss_dssp             HTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEG--GGHHHHHHHHHHTCC-SEEEEEC
T ss_pred             hcCC-EEEEeccCCCCcHHHHHHHHHHHHcCCCCchheEeEEeeH--HHHHHHHHHHhCCCc-ceEEEeC
Confidence            6677 88887543    3578999999999999777888999999  999999999988865 6999875

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=6.5e-54  Score=403.99  Aligned_cols=339  Identities=26%  Similarity=0.395  Sum_probs=291.7

Q ss_pred             hhcceeEEEecCC-ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCc
Q 017426           15 EEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (372)
Q Consensus        15 ~~~~~~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (372)
                      +++||++++.+++ .+++.++|.|+|+++||+|||.++|+|++|++++.|...    ..+|.++|||++|+|+++|++|+
T Consensus         6 ~~~mkA~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----~~~P~v~GhE~~G~V~~vG~~v~   81 (374)
T 2jhf_A            6 VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV----TPLPVIAGHEAAGIVESIGEGVT   81 (374)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC----CCSSBCCCCSEEEEEEEECTTCC
T ss_pred             ceeEEEEEEecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCC----CCCCcccCcCceEEEEEECCCCC
Confidence            4568999988775 699999999999999999999999999999999987542    13799999999999999999999


Q ss_pred             cccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---ccC-----------------CCCCcceeEEEec
Q 017426           94 TLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---ATP-----------------PVHGSLANQVVHP  153 (372)
Q Consensus        94 ~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~g~~~e~~~v~  153 (372)
                      +|++        ||||++.+..+|++|++|..++.++|++....   +..                 ...|+|+||+.+|
T Consensus        82 ~~~v--------GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~  153 (374)
T 2jhf_A           82 TVRP--------GDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVD  153 (374)
T ss_dssp             SCCT--------TCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEE
T ss_pred             CCCC--------CCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEc
Confidence            9999        99999999999999999999999999986542   110                 1259999999999


Q ss_pred             CCceEECCCCCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH
Q 017426          154 ADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK  231 (372)
Q Consensus       154 ~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~  231 (372)
                      ++.++++|+++++++|++++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|++.|+++++++++.++++
T Consensus       154 ~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~  233 (374)
T 2jhf_A          154 EISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK  233 (374)
T ss_dssp             GGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred             hHHeEECCCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            99999999999999999887 678999988 4689999999999999999999999999999977899999999999999


Q ss_pred             HhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccC-CEEEEEcCCCC--Cccccchhhhc
Q 017426          232 EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHH--EMTVPLTPAAV  308 (372)
Q Consensus       232 ~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~  308 (372)
                      ++|++.++++.+..+++.+.++++.   ++++|++||++|.+..+..++++|+++ |+++.+|....  ...++...+..
T Consensus       234 ~lGa~~vi~~~~~~~~~~~~~~~~~---~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~  310 (374)
T 2jhf_A          234 EVGATECVNPQDYKKPIQEVLTEMS---NGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLS  310 (374)
T ss_dssp             HTTCSEEECGGGCSSCHHHHHHHHT---TSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHT
T ss_pred             HhCCceEecccccchhHHHHHHHHh---CCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhc
Confidence            9999998876532356777777654   348999999999877899999999999 99999986543  23444555666


Q ss_pred             cCcEEEeeccC----CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          309 REVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       309 ~~~~i~~~~~~----~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +. ++.++...    .++++++++++++|.+.+.+.++++|++  +++++|++.+.+++. +|+|+++
T Consensus       311 ~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~Kvvi~~  374 (374)
T 2jhf_A          311 GR-TWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDLLRSGES-IRTILTF  374 (374)
T ss_dssp             TC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEG--GGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             CC-eEEEeccCCCChHHHHHHHHHHHHcCCCCchhheEEEEeH--HHHHHHHHHHHCCCc-ceEEEeC
Confidence            77 88887543    3578999999999999777788999999  999999999988764 7999875

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=6.4e-54  Score=400.46  Aligned_cols=333  Identities=24%  Similarity=0.401  Sum_probs=296.7

Q ss_pred             ceeEEEe--cCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccc
Q 017426           18 NMAAWLL--GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (372)
Q Consensus        18 ~~~~~~~--~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (372)
                      |||+++.  +++.+++.++|.|+|+|+||||||.++|+|++|++++.|.+.    .++|.++|||++|+|+++|++|++|
T Consensus         1 MKA~v~~~~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~----~~~p~i~GhE~aG~V~~vG~~V~~~   76 (348)
T 4eez_A            1 MKAAVVRHNPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFG----NKAGTVLGHEGIGIVKEIGADVSSL   76 (348)
T ss_dssp             CEEEEECSSCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTC----CCTTCBCCSEEEEEEEEECTTCCSC
T ss_pred             CeEEEEEcCCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCC----CCCCcccceeEEEEEEEECceeeec
Confidence            7898886  346799999999999999999999999999999999987543    4679999999999999999999999


Q ss_pred             cccccccCCCCCEEEEcCCc-CCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-
Q 017426           96 VPGDRVTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        96 ~~gd~v~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-  173 (372)
                      ++        ||||.+.+.. .|+.|.+|..+..++|......+. ..+|+|+||+.++++.++++|+++++++|++++ 
T Consensus        77 ~~--------GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~  147 (348)
T 4eez_A           77 QV--------GDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGY-SVDGGMAEEAIVVADYAVKVPDGLDPIEASSITC  147 (348)
T ss_dssp             CT--------TCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHH
T ss_pred             cc--------CCeEeecccccccCccccccCCccccccccccccc-ccCCcceeeccccccceeecCCCCCHHHHhhccc
Confidence            99        9999777554 578999999999999988777665 578999999999999999999999999999887 


Q ss_pred             hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHH
Q 017426          174 PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE  253 (372)
Q Consensus       174 ~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~  253 (372)
                      .+.|||++++.+++++|++|||+|+|++|.+++|+++.++..+|++++++++|.++++++|++.++++.+  +++.+.++
T Consensus       148 ~~~ta~~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~--~~~~~~v~  225 (348)
T 4eez_A          148 AGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGD--VNPVDEIK  225 (348)
T ss_dssp             HHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-C--CCHHHHHH
T ss_pred             ceeeEEeeecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCC--CCHHHHhh
Confidence            6678999999889999999999999999999999999876668999999999999999999999998654  67888887


Q ss_pred             HHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-CCcHHHHHHHHHc
Q 017426          254 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRS  332 (372)
Q Consensus       254 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~~  332 (372)
                      +++  .+.++|.+++++++...+..+++.++++|+++.++.......++...+..+++++.++..+ ..+++++++++++
T Consensus       226 ~~t--~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~~~l~~~  303 (348)
T 4eez_A          226 KIT--GGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAE  303 (348)
T ss_dssp             HHT--TSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEECHHHHHHSCCEEEECCSCCHHHHHHHHHHHHT
T ss_pred             hhc--CCCCceEEEEeccCcchhheeheeecCCceEEEEeccCCCCccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHc
Confidence            765  4678999999999998999999999999999999977766677888889999999998766 5679999999999


Q ss_pred             CCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          333 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       333 g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      |++  ++. +++|++  +++++|++.+++++..||+|++|
T Consensus       304 g~i--~p~-~~~~~l--~~~~~A~~~l~~g~~~GKvVl~~  338 (348)
T 4eez_A          304 GKV--KPI-VATRKL--EEINDIIDEMKAGKIEGRMVIDF  338 (348)
T ss_dssp             TSC--CCC-EEEECG--GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             CCC--EEE-EEEEeH--HHHHHHHHHHHCCCCccEEEEEc
Confidence            998  444 478888  99999999999999999999986

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.7e-54  Score=408.32  Aligned_cols=340  Identities=25%  Similarity=0.414  Sum_probs=297.2

Q ss_pred             chhcceeEEEecCC-ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCC
Q 017426           14 GEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (372)
Q Consensus        14 ~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (372)
                      +.-+||++++.+++ .+++.++|.|+|+++||+|||.++|+|++|++.+.|.+.   ...+|.++|||++|+|+++| +|
T Consensus        14 ~~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~---~~~~P~v~GhE~~G~V~~vG-~V   89 (380)
T 1vj0_A           14 MGLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDP---RVPLPIILGHEGAGRVVEVN-GE   89 (380)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCT---TCCSSBCCCCEEEEEEEEES-SC
T ss_pred             hhhheEEEEEecCCCCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCC---CCCCCcccCcCcEEEEEEeC-Cc
Confidence            44568999999887 999999999999999999999999999999999987532   13579999999999999999 99


Q ss_pred             c------cccccccccCCCCCEEEEcCCcCCCCCcccc-CCCCCCCCCccccccC-------CCCCcceeEEEe-cCCce
Q 017426           93 K------TLVPGDRVTLVPGDRVALEPGISCWRCDHCK-GGRYNLCPEMKFFATP-------PVHGSLANQVVH-PADLC  157 (372)
Q Consensus        93 ~------~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~g~~~e~~~v-~~~~~  157 (372)
                      +      +|++        ||||++.+..+|+.|++|. .++.++|++...++..       ...|+|+||+.+ |++.+
T Consensus        90 ~~~~~~~~~~v--------GdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~  161 (380)
T 1vj0_A           90 KRDLNGELLKP--------GDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDV  161 (380)
T ss_dssp             CBCTTSCBCCT--------TCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCE
T ss_pred             cccccCCCCCC--------CCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceE
Confidence            9      9999        9999999999999999999 9999999988776631       357999999999 99999


Q ss_pred             EECCCCCCcc-cccccchhHHHHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC
Q 017426          158 FKLPDNVSLE-EGAMCEPLSVGVHACRRAN-IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA  235 (372)
Q Consensus       158 ~~~P~~~~~~-~aa~~~~~~~a~~~l~~~~-~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~  235 (372)
                      +++|++++++ +|+++.+++|||++++.++ +++|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|+
T Consensus       162 ~~iP~~l~~~~~Aa~~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa  241 (380)
T 1vj0_A          162 LKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA  241 (380)
T ss_dssp             EEECTTSCHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTC
T ss_pred             EECCCCCChHHhHhhhcHHHHHHHHHHhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCC
Confidence            9999999999 8888889999999998888 9999999999999999999999999995478999999999999999999


Q ss_pred             CeEEecCC-CcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCC-C-Cccccchh-hhccCc
Q 017426          236 DNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-H-EMTVPLTP-AAVREV  311 (372)
Q Consensus       236 ~~v~~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~-~~~~~~~~-~~~~~~  311 (372)
                      +.++++.. ..+++.+.+++++  .+.++|+|||++|++..+..++++|+++|+++.+|... . ...++... +..+++
T Consensus       242 ~~vi~~~~~~~~~~~~~v~~~~--~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~  319 (380)
T 1vj0_A          242 DLTLNRRETSVEERRKAIMDIT--HGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNA  319 (380)
T ss_dssp             SEEEETTTSCHHHHHHHHHHHT--TTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTC
T ss_pred             cEEEeccccCcchHHHHHHHHh--CCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhCCe
Confidence            99887541 1356666676653  24589999999998778899999999999999998755 3 44555566 778999


Q ss_pred             EEEeeccC-CCcHHHHHHHHHc--CCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          312 DVVGVFRY-KNTWPLCLELLRS--GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       312 ~i~~~~~~-~~~~~~~~~ll~~--g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ++.++... .++++++++++++  |++  .+.++++|++  +++++|++.+.++... |+|+++
T Consensus       320 ~i~g~~~~~~~~~~~~~~l~~~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~-Kvvl~~  378 (380)
T 1vj0_A          320 TFKGIWVSDTSHFVKTVSITSRNYQLL--SKLITHRLPL--KEANKALELMESREAL-KVILYP  378 (380)
T ss_dssp             EEEECCCCCHHHHHHHHHHHHTCHHHH--GGGCCEEEEG--GGHHHHHHHHHHTSCS-CEEEEC
T ss_pred             EEEEeecCCHHHHHHHHHHHHhhcCCe--eeEEEEEEeH--HHHHHHHHHHhcCCCc-eEEEEe
Confidence            99998765 5679999999999  988  7788899999  9999999999988777 999874

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=3.5e-53  Score=393.70  Aligned_cols=332  Identities=30%  Similarity=0.447  Sum_probs=289.7

Q ss_pred             ceeEEEecCC-ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      ||++++.+++ .+++.++|.|+|+++||+|||.++|+|++|++.+.|.++  ....+|.++|||++|+|+++|++|++|+
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~v~GhE~~G~V~~vG~~v~~~~   78 (339)
T 1rjw_A            1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWP--VKPKLPLIPGHEGVGIVEEVGPGVTHLK   78 (339)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSS--SCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCC--cCCCCCeeccccceEEEEEECCCCCcCC
Confidence            6888888776 799999999999999999999999999999999987542  1236799999999999999999999999


Q ss_pred             ccccccCCCCCEEEEcCCc-CCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-h
Q 017426           97 PGDRVTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-P  174 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~  174 (372)
                      +        ||||++.+.. .|+.|++|..++.++|++...++. ..+|+|+||+.+|++.++++|+++++++|+.++ .
T Consensus        79 v--------GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~  149 (339)
T 1rjw_A           79 V--------GDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCA  149 (339)
T ss_dssp             T--------TCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTH
T ss_pred             C--------CCEEEEecCCCCCCCCchhhCcCcccCCCcceeec-CCCCcceeeEEechHHEEECCCCCCHHHhhhhhhh
Confidence            9        9999887654 599999999999999998877664 568999999999999999999999999999876 6


Q ss_pred             hHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHH
Q 017426          175 LSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       175 ~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~  254 (372)
                      +.|||++++..++++|++|||+|+|++|++++|+++.+|+ .|+++++++++.++++++|++.++++.+  +++.+.+++
T Consensus       150 ~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d~~~--~~~~~~~~~  226 (339)
T 1rjw_A          150 GVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPLK--EDAAKFMKE  226 (339)
T ss_dssp             HHHHHHHHHHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTTT--SCHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEecCCC--ccHHHHHHH
Confidence            6789999987789999999999998899999999999999 7899999999999999999998877543  567777766


Q ss_pred             HHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-CCcHHHHHHHHHcC
Q 017426          255 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG  333 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~~g  333 (372)
                      ..    +++|++||++|.+..++.++++|+++|+++.+|.......++...+..+++++.++... .++++++++++++|
T Consensus       227 ~~----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g  302 (339)
T 1rjw_A          227 KV----GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEG  302 (339)
T ss_dssp             HH----SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTT
T ss_pred             Hh----CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcEEEEeccCCHHHHHHHHHHHHcC
Confidence            53    58999999999877899999999999999999876544455555677899999998765 46789999999999


Q ss_pred             CCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          334 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      .+.  +. +++|++  +++++|++.+.+++..+|+|+++
T Consensus       303 ~l~--~~-~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  336 (339)
T 1rjw_A          303 KVK--TI-IEVQPL--EKINEVFDRMLKGQINGRVVLTL  336 (339)
T ss_dssp             SCC--CC-EEEEEG--GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             CCC--cc-EEEEcH--HHHHHHHHHHHcCCCceEEEEec
Confidence            984  33 578999  99999999999988889999874

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=6.1e-54  Score=400.32  Aligned_cols=326  Identities=21%  Similarity=0.284  Sum_probs=282.4

Q ss_pred             hhcceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCc
Q 017426           15 EEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (372)
Q Consensus        15 ~~~~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (372)
                      +++||++++.++ +.+++.++|.|+|+++||+|||+++|+|++|++++.|....   ..+|.++|||++|+|+++|++|+
T Consensus         2 ~m~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~E~~G~V~~vG~~v~   78 (348)
T 3two_A            2 RVQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKE---GIYPMIPGHEIAGIIKEVGKGVK   78 (348)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSC---CCSSBCCCCCEEEEEEEECTTCC
T ss_pred             ceEEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCC---CCCCeecCcceeEEEEEECCCCC
Confidence            357999998865 67999999999999999999999999999999999885432   46799999999999999999999


Q ss_pred             cccccccccCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccccC---------CCCCcceeEEEecCCceEECCCC
Q 017426           94 TLVPGDRVTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATP---------PVHGSLANQVVHPADLCFKLPDN  163 (372)
Q Consensus        94 ~~~~gd~v~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~g~~~e~~~v~~~~~~~~P~~  163 (372)
                      +|++        ||||++.+. .+|+.|++|..+++++|+ ....+..         ...|+|+||+.+|+++++++|++
T Consensus        79 ~~~v--------GdrV~~~~~~~~Cg~C~~C~~g~~~~c~-~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~  149 (348)
T 3two_A           79 KFKI--------GDVVGVGCFVNSCKACKPCKEHQEQFCT-KVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKN  149 (348)
T ss_dssp             SCCT--------TCEEEECSEEECCSCSHHHHTTCGGGCT-TCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTT
T ss_pred             CCCC--------CCEEEEeCCcCCCCCChhHhCCCcccCc-ccccccccccccccCCcCCccccceEEechhhEEECCCC
Confidence            9999        999988654 789999999999999998 4343331         12399999999999999999999


Q ss_pred             CCcccccccc-hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecC
Q 017426          164 VSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  242 (372)
Q Consensus       164 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~  242 (372)
                      +++++|+.++ .+.|||+++++.++++|++|||+|+|++|++++|+|+.+|+ .|+++++++++.++++++|++.++ . 
T Consensus       150 ~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~-~-  226 (348)
T 3two_A          150 APLEKVAPLLCAGITTYSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY-T-  226 (348)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHTTCSEEE-S-
T ss_pred             CCHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCeec-C-
Confidence            9999999877 56789999998899999999999999999999999999999 689999999999999999999887 2 


Q ss_pred             CCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCC-CCcc-ccchhhh-ccCcEEEeeccC
Q 017426          243 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMT-VPLTPAA-VREVDVVGVFRY  319 (372)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~-~~~~~~~-~~~~~i~~~~~~  319 (372)
                      + ...+           ..++|++||++|++..++.++++|+++|+++.+|... .... ++...+. .+++++.++..+
T Consensus       227 ~-~~~~-----------~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~  294 (348)
T 3two_A          227 D-PKQC-----------KEELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIG  294 (348)
T ss_dssp             S-GGGC-----------CSCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSC
T ss_pred             C-HHHH-----------hcCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecC
Confidence            1 1111           2389999999998768899999999999999998766 4444 5556666 899999998766


Q ss_pred             -CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          320 -KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       320 -~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                       .++++++++++++|.++  +. +++|++  +++++|++.+.+++..||+|+++
T Consensus       295 ~~~~~~~~~~l~~~g~l~--~~-~~~~~l--~~~~~A~~~~~~~~~~gKvVi~~  343 (348)
T 3two_A          295 GIKETQEMVDFSIKHNIY--PE-IDLILG--KDIDTAYHNLTHGKAKFRYVIDM  343 (348)
T ss_dssp             CHHHHHHHHHHHHHTTCC--CC-EEEECG--GGHHHHHHHHHTTCCCSEEEEEG
T ss_pred             CHHHHHHHHHHHHhCCCC--ce-EEEEEH--HHHHHHHHHHHcCCCceEEEEec
Confidence             46799999999999994  44 478999  99999999999998889999974

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=9.9e-54  Score=400.61  Aligned_cols=334  Identities=23%  Similarity=0.327  Sum_probs=285.5

Q ss_pred             cchhcceeEEEecCC-ceeEEE--ecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEec
Q 017426           13 DGEEVNMAAWLLGVN-TLKIQP--FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG   89 (372)
Q Consensus        13 ~~~~~~~~~~~~~~~-~l~~~~--~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   89 (372)
                      +++.+||++++.+++ .+++.+  +|.|+|+++||+|||+++|+|++|++.+.|.+.   ...+|.++|||++|+|+++|
T Consensus         2 ~~p~~mka~~~~~~~~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~p~v~GhE~~G~V~~vG   78 (360)
T 1piw_A            2 SYPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWG---NMKMPLVVGHEIVGKVVKLG   78 (360)
T ss_dssp             CTTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTS---CCCSSEECCCCEEEEEEEEC
T ss_pred             CCChheEEEEEecCCCCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCC---CCCCCcccCcCceEEEEEeC
Confidence            456679999998764 689999  999999999999999999999999999987532   13579999999999999999


Q ss_pred             CCCc-cccccccccCCCCCEEEEc-CCcCCCCCccccCCCCCCCCCc-cccc-----cCCCCCcceeEEEecCCceEECC
Q 017426           90 SEVK-TLVPGDRVTLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEM-KFFA-----TPPVHGSLANQVVHPADLCFKLP  161 (372)
Q Consensus        90 ~~v~-~~~~gd~v~~~~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~g~~~e~~~v~~~~~~~~P  161 (372)
                      ++|+ +|++        ||||++. ...+|++|++|..++.++|++. ..++     +...+|+|+||+.+|++.++++|
T Consensus        79 ~~v~~~~~~--------GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP  150 (360)
T 1piw_A           79 PKSNSGLKV--------GQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIP  150 (360)
T ss_dssp             TTCCSSCCT--------TCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECC
T ss_pred             CCCCCCCCC--------CCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECC
Confidence            9999 9999        9999655 4468999999999999999876 3331     12457999999999999999999


Q ss_pred             CCCCcccccccc-hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEe
Q 017426          162 DNVSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  240 (372)
Q Consensus       162 ~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~  240 (372)
                      +++++++|+.++ .+.|||++++.+++++|++|||+|+|++|++++|+|+.+|+ .|+++++++++.++++++|++.+++
T Consensus       151 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~~  229 (360)
T 1piw_A          151 ENIPSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIA  229 (360)
T ss_dssp             TTSCHHHHGGGGTHHHHHHHHHHHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEE
T ss_pred             CCCCHHHhhhhhhhHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCCEEEc
Confidence            999999999776 67799999988999999999999999999999999999999 5899999999999999999999887


Q ss_pred             cCCCcccHHHHHHHHHHHcCCcceEEEeCCCc--HHHHHHHHHHhccCCEEEEEcCCCCCc-cccchhhhccCcEEEeec
Q 017426          241 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGL--NKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVF  317 (372)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~  317 (372)
                      +.+. .++.+.+       .+++|++||++|+  +..++.++++|+++|+++.+|.... . .++...+..+++++.++.
T Consensus       230 ~~~~-~~~~~~~-------~~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~  300 (360)
T 1piw_A          230 TLEE-GDWGEKY-------FDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISYSA  300 (360)
T ss_dssp             GGGT-SCHHHHS-------CSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEECC
T ss_pred             CcCc-hHHHHHh-------hcCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeEEEEEe
Confidence            6432 1443322       2589999999998  5678889999999999999986554 3 455566778999999987


Q ss_pred             cC-CCcHHHHHHHHHcCCCCCCCceEEEecCChHH--HHHHHHHHhcCCCceEEEEeC
Q 017426          318 RY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKE--VEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       318 ~~-~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~--~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      .. .++++++++++++|++  ++.+ ++|++  ++  +++|++.+.+++..+|+|+++
T Consensus       301 ~~~~~~~~~~~~l~~~g~l--~~~i-~~~~l--~~~~~~~A~~~~~~~~~~gKvvi~~  353 (360)
T 1piw_A          301 LGSIKELNQLLKLVSEKDI--KIWV-ETLPV--GEAGVHEAFERMEKGDVRYRFTLVG  353 (360)
T ss_dssp             CCCHHHHHHHHHHHHHTTC--CCCE-EEEES--SHHHHHHHHHHHHHTCCSSEEEEEC
T ss_pred             cCCHHHHHHHHHHHHhCCC--cceE-EEEec--cHhHHHHHHHHHHCCCCceEEEEec
Confidence            65 4678999999999998  5556 89999  99  999999999888889999874

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=7.7e-53  Score=392.28  Aligned_cols=332  Identities=23%  Similarity=0.366  Sum_probs=267.5

Q ss_pred             hcceeEEEecCC-ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           16 EVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        16 ~~~~~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      .+||++++.+++ .+++.++|.|+|+++||+|||.++|+|++|++.+.|.+.. ....+|.++|||++|+|+++|++ ++
T Consensus         2 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~p~i~G~E~~G~V~~vG~~-~~   79 (344)
T 2h6e_A            2 VKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAK-QGFRLPIILGHENAGTIVEVGEL-AK   79 (344)
T ss_dssp             EEEEBCEECSCCC-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCC-TTCCSSEECCCCEEEEEEEECTT-CC
T ss_pred             ceeEEEEEecCCCCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcc-cCCCCCccccccceEEEEEECCC-CC
Confidence            358999998774 7999999999999999999999999999999999875421 12367999999999999999999 99


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEec-CCceEECCCCCCcccccccc
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP-ADLCFKLPDNVSLEEGAMCE  173 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~-~~~~~~~P~~~~~~~aa~~~  173 (372)
                      |++        ||||+..+..+|++|++|..+++++|++...++. ..+|+|+||+.+| ++.++++ +++++++|+.++
T Consensus        80 ~~~--------GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~  149 (344)
T 2h6e_A           80 VKK--------GDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQ-TTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLA  149 (344)
T ss_dssp             CCT--------TCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTT-TBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGG
T ss_pred             CCC--------CCEEEECCCCCCCCChhhhCCCcccCCCcccccc-ccCCcceeeEEecCcccEEEe-CCCCHHHhhhhh
Confidence            999        9999888889999999999999999998877664 5689999999999 9999999 999999999776


Q ss_pred             -hhHHHHHHHHhc-----CCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEecChhHHHHHHHhCCCeEEecCCCc
Q 017426          174 -PLSVGVHACRRA-----NIGPETNVLIMGAGPIGLVTMLAARAF--GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL  245 (372)
Q Consensus       174 -~~~~a~~~l~~~-----~~~~g~~vlI~Gag~~G~~ai~l~~~~--g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~  245 (372)
                       .+.|||++++..     ++ +|++|||+|+|++|++++|+|+.+  |+ .|+++++++++.++++++|++.++++.+. 
T Consensus       150 ~~~~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~-  226 (344)
T 2h6e_A          150 DAGTTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALELGADYVSEMKDA-  226 (344)
T ss_dssp             THHHHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHHTCSEEECHHHH-
T ss_pred             hhhHHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHhCCCEEeccccc-
Confidence             667899999776     89 999999999999999999999999  99 58999999999999999999998764320 


Q ss_pred             ccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-CCcHH
Q 017426          246 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWP  324 (372)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~  324 (372)
                      ++   .+.++.  .+.++|+|||++|++..++.++++|+++|+++.+|.......++...+..+++++.++... .++++
T Consensus       227 ~~---~~~~~~--~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~  301 (344)
T 2h6e_A          227 ES---LINKLT--DGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLE  301 (344)
T ss_dssp             HH---HHHHHH--TTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHHHTTCEEEECCSCCHHHHH
T ss_pred             hH---HHHHhh--cCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCCcccCHHHHhhCCcEEEEEecCCHHHHH
Confidence            22   233333  2458999999999977899999999999999999875544456666778899999998765 56799


Q ss_pred             HHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          325 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       325 ~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ++++++++|++  ++.+ ++|++  +++++|++.+.+++..+|+|+++
T Consensus       302 ~~~~l~~~g~i--~~~i-~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          302 DVVRLSESGKI--KPYI-IKVPL--DDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             HHHHHHHTTSS--CCCE-EEECC------------------CEEEECC
T ss_pred             HHHHHHHcCCC--Ccce-EEEeH--HHHHHHHHHHHcCCCceEEEEeC
Confidence            99999999998  5667 89999  99999999999888789999874

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2e-52  Score=389.97  Aligned_cols=338  Identities=22%  Similarity=0.318  Sum_probs=292.1

Q ss_pred             chhcceeEEEecCC-ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCC
Q 017426           14 GEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (372)
Q Consensus        14 ~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (372)
                      ++.+||++++.+++ .+++.++|.|+|+++||+|||.++|+|++|++++.|.++  ....+|.++|||++|+|+++|++|
T Consensus         2 ~p~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~v~G~E~~G~V~~vG~~v   79 (347)
T 2hcy_A            2 IPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWP--LPVKLPLVGGHEGAGVVVGMGENV   79 (347)
T ss_dssp             CCSEEEEEEESSTTCCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSS--SCCCSSEECCCEEEEEEEEECTTC
T ss_pred             CCcccEEEEEeCCCCCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCC--CCCCCCcccCccceEEEEEECCCC
Confidence            45679999998776 799999999999999999999999999999999987542  123679999999999999999999


Q ss_pred             ccccccccccCCCCCEEEEcCCc-CCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccc
Q 017426           93 KTLVPGDRVTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAM  171 (372)
Q Consensus        93 ~~~~~gd~v~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~  171 (372)
                      ++|++        ||||++.+.. .|+.|++|..++.++|++...++. ..+|+|+||+.+|++.++++|+++++++|+.
T Consensus        80 ~~~~~--------GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~  150 (347)
T 2hcy_A           80 KGWKI--------GDYAGIKWLNGSCMACEYCELGNESNCPHADLSGY-THDGSFQQYATADAVQAAHIPQGTDLAQVAP  150 (347)
T ss_dssp             CSCCT--------TCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTT-TBCCSSBSEEEEETTTSEEECTTCCHHHHGG
T ss_pred             CCCcC--------CCEEEEecCCCCCCCChhhhCCCcccCcccccccc-CCCCcceeEEEeccccEEECCCCCCHHHHHH
Confidence            99999        9999887654 599999999999999998877664 5689999999999999999999999999998


Q ss_pred             cc-hhHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHH
Q 017426          172 CE-PLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIA  249 (372)
Q Consensus       172 ~~-~~~~a~~~l~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~  249 (372)
                      ++ .+.|||+++++.++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++++|++.++++.+ .+++.
T Consensus       151 l~~~~~ta~~~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~~~~d~~~-~~~~~  228 (347)
T 2hcy_A          151 ILCAGITVYKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVFIDFTK-EKDIV  228 (347)
T ss_dssp             GGTHHHHHHHHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTCCEEEETTT-CSCHH
T ss_pred             HhhhHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCceEEecCc-cHhHH
Confidence            76 6678999998889999999999998 9999999999999999 6888888999999999999988877642 35677


Q ss_pred             HHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC-CccccchhhhccCcEEEeeccC-CCcHHHHH
Q 017426          250 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCL  327 (372)
Q Consensus       250 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~  327 (372)
                      +.+++...  + ++|++||++|....++.+++.|+++|+++.+|.... ...++...+..+++++.++... .+++++++
T Consensus       229 ~~~~~~~~--~-~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  305 (347)
T 2hcy_A          229 GAVLKATD--G-GAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREAL  305 (347)
T ss_dssp             HHHHHHHT--S-CEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCCHHHHHHHH
T ss_pred             HHHHHHhC--C-CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCCHHHHHHHH
Confidence            77766642  3 899999999987788999999999999999986542 2345555677899999998765 46789999


Q ss_pred             HHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          328 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       328 ~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +++++|.+.  +. +++|++  +++++|++.+.+++..+|+|+++
T Consensus       306 ~l~~~g~l~--~~-~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  345 (347)
T 2hcy_A          306 DFFARGLVK--SP-IKVVGL--STLPEIYEKMEKGQIVGRYVVDT  345 (347)
T ss_dssp             HHHHTTSCC--CC-EEEEEG--GGHHHHHHHHHTTCCSSEEEEES
T ss_pred             HHHHhCCCc--cc-eEEEcH--HHHHHHHHHHHcCCcceeEEEec
Confidence            999999984  33 578999  99999999999888889999874

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=1.1e-52  Score=391.11  Aligned_cols=334  Identities=28%  Similarity=0.470  Sum_probs=291.7

Q ss_pred             ceeEEEecCC---ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        18 ~~~~~~~~~~---~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      ||++++.+++   .+++.++|.|.|+++||+|||+++|+|++|+++..|.++.  ...+|.++|||++|+|+++|++|++
T Consensus         1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~E~~G~V~~vG~~v~~   78 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASP--KLPLPHVLGADGSGVVDAVGPGVEG   78 (343)
T ss_dssp             CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSST--TCCSSEECCSEEEEEEEEECSSCCS
T ss_pred             CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCC--CCCCCcccccceEEEEEEECCCCCC
Confidence            6888888665   3899999999999999999999999999999999875421  1367999999999999999999999


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-  173 (372)
                      |++        ||||++.+..+|+.|++|..+++++|++...+|. ..+|+|+||+.+|++.++++|+++++++|++++ 
T Consensus        79 ~~v--------GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~  149 (343)
T 2eih_A           79 FAP--------GDEVVINPGLSCGRCERCLAGEDNLCPRYQILGE-HRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPL  149 (343)
T ss_dssp             CCT--------TCEEEECCEECCSCSHHHHTTCGGGCTTCEETTT-SSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHH
T ss_pred             CCC--------CCEEEECCCCCcccchhhccCcccccccccccCc-CCCccceeEEEeChHHeEECCCCCCHHHHhhchh
Confidence            999        9999999999999999999999999999887664 457999999999999999999999999999655 


Q ss_pred             hhHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHH
Q 017426          174 PLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE  251 (372)
Q Consensus       174 ~~~~a~~~l~~-~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~  251 (372)
                      ++.|||++++. +++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.++++++|++.++++.+  +++.+.
T Consensus       150 ~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~--~~~~~~  226 (343)
T 2eih_A          150 TFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTH--PDWPKE  226 (343)
T ss_dssp             HHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTS--TTHHHH
T ss_pred             hHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEcCCc--ccHHHH
Confidence            88899999976 78999999999998 9999999999999999 6889999999999999999998877643  466666


Q ss_pred             HHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-ccccchhhhccCcEEEeeccC-CCcHHHHHHH
Q 017426          252 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-KNTWPLCLEL  329 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~l  329 (372)
                      +++..  .+.++|++||++|. ..++.+++.|+++|+++.++..... ..++...+..+++++.++... .+++++++++
T Consensus       227 ~~~~~--~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l  303 (343)
T 2eih_A          227 VRRLT--GGKGADKVVDHTGA-LYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRF  303 (343)
T ss_dssp             HHHHT--TTTCEEEEEESSCS-SSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSCCGGGHHHHHHH
T ss_pred             HHHHh--CCCCceEEEECCCH-HHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecCccHHHHHHHHHH
Confidence            66653  24589999999994 5889999999999999999865433 235566777899999998654 5789999999


Q ss_pred             HHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          330 LRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       330 l~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +++|.+  ++.++++|++  +++++|++.+.++...+|+|+++
T Consensus       304 ~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          304 VEEGKL--KPVVGQVLPL--EAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             HHHTSS--CCCEEEEEEG--GGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             HHcCCC--CCceeEEeeH--HHHHHHHHHHHcCCCceEEEEec
Confidence            999998  6788999999  99999999999888889999874

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=4.8e-52  Score=389.44  Aligned_cols=332  Identities=22%  Similarity=0.262  Sum_probs=286.7

Q ss_pred             cchhcceeEEEe--cCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecC
Q 017426           13 DGEEVNMAAWLL--GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (372)
Q Consensus        13 ~~~~~~~~~~~~--~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (372)
                      .++.+||++++.  +++.+++.++|.|+|+++||+|||+++|+|++|++++.|.+..  ...+|.++|||++|+|+++|+
T Consensus        23 ~m~~~mkA~~~~~~~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~P~v~GhE~~G~V~~vG~  100 (363)
T 3uog_A           23 MMSKWMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGL--DLAFPFVPASDMSGVVEAVGK  100 (363)
T ss_dssp             CCCSEEEEEEBSCTTTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTC--CCCSSBCCCCEEEEEEEEECT
T ss_pred             cCchhhEEEEEccCCCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC--CCCCCcCcccceEEEEEEECC
Confidence            456779999998  4579999999999999999999999999999999999986532  246799999999999999999


Q ss_pred             CCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCC---ccccccCCCCCcceeEEEecCCceEECCCCCCcc
Q 017426           91 EVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE---MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLE  167 (372)
Q Consensus        91 ~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~  167 (372)
                      +|++|++        ||||++.+..      +|..+. ++|.+   .....+...+|+|+||+.+|++.++++|++++++
T Consensus       101 ~v~~~~v--------GDrV~~~~~~------~c~~g~-~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~  165 (363)
T 3uog_A          101 SVTRFRP--------GDRVISTFAP------GWLDGL-RPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAA  165 (363)
T ss_dssp             TCCSCCT--------TCEEEECSST------TCCSSS-CCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHH
T ss_pred             CCCCCCC--------CCEEEEeccc------cccccc-cccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHH
Confidence            9999999        9999886543      566666 77863   2221123467999999999999999999999999


Q ss_pred             cccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCc
Q 017426          168 EGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL  245 (372)
Q Consensus       168 ~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~  245 (372)
                      +||+++ .+.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++.++++++|++.+++  ...
T Consensus       166 ~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~--~~~  242 (363)
T 3uog_A          166 EASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGIN--RLE  242 (363)
T ss_dssp             HHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEE--TTT
T ss_pred             HHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCCCEEEc--CCc
Confidence            999887 667999999 57999999999999999999999999999999 6899999999999999999999887  334


Q ss_pred             ccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-ccccchhhhccCcEEEeeccC-CCcH
Q 017426          246 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-KNTW  323 (372)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~  323 (372)
                      +++.+.+++++  .+.++|++||++|. ..+..++++|+++|+++.+|..... ..++...+..+++++.++... .+.+
T Consensus       243 ~~~~~~v~~~~--~g~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  319 (363)
T 3uog_A          243 EDWVERVYALT--GDRGADHILEIAGG-AGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRAL  319 (363)
T ss_dssp             SCHHHHHHHHH--TTCCEEEEEEETTS-SCHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEECCCCCHHHH
T ss_pred             ccHHHHHHHHh--CCCCceEEEECCCh-HHHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEEecCCHHHH
Confidence            67888887775  35689999999996 5889999999999999999865543 466677788899999998766 5689


Q ss_pred             HHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          324 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       324 ~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +++++++++|.+  .+.++++|++  +++++|++.+.++. .||+|++|
T Consensus       320 ~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          320 EDLVGAVDRLGL--KPVIDMRYKF--TEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             HHHHHHHHHHTC--CCCEEEEEEG--GGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             HHHHHHHHcCCC--ccceeeEEcH--HHHHHHHHHHHcCC-CccEEEeC
Confidence            999999999988  7889999999  99999999999998 89999986

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=3.4e-52  Score=388.37  Aligned_cols=335  Identities=29%  Similarity=0.431  Sum_probs=291.9

Q ss_pred             ceeEEEecCC-ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccC-----CcccCCCcccccceeEEEEEecCC
Q 017426           18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA-----DFVVKEPMVIGHECAGVIEKVGSE   91 (372)
Q Consensus        18 ~~~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~-----~~~~~~p~~~G~e~~G~V~~vG~~   91 (372)
                      ||++++.+++ .+++.++|.|+|+++||+|||.++|+|++|++++.|.+..     .....+|.++|||++|+|+++|++
T Consensus         1 Mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   80 (347)
T 1jvb_A            1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (347)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCC
Confidence            6888888774 7999999999999999999999999999999998875431     012367999999999999999999


Q ss_pred             CccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecC-CceEECCCCCCccccc
Q 017426           92 VKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA-DLCFKLPDNVSLEEGA  170 (372)
Q Consensus        92 v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~-~~~~~~P~~~~~~~aa  170 (372)
                      |++|++        ||||++.+..+|++|++|..+++++|++...+|. ..+|+|+||+.+|+ +.++++ +++++++|+
T Consensus        81 v~~~~v--------GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa  150 (347)
T 1jvb_A           81 VVGYSK--------GDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVIVPHYKYMYKL-RRLNAVEAA  150 (347)
T ss_dssp             CCSCCT--------TCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTT-TBCCSSBSEEEESCGGGEEEC-SSSCHHHHG
T ss_pred             CCCCCC--------CCEEEeCCCCCCCCChhhhCcCcccCcccccccc-cCCCcceeEEEecCccceEEe-CCCCHHHcc
Confidence            999999        9999888889999999999999999998877664 56799999999999 999999 999999999


Q ss_pred             ccc-hhHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCCeEEEEecChhHHHHHHHhCCCeEEecCCCccc
Q 017426          171 MCE-PLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD  247 (372)
Q Consensus       171 ~~~-~~~~a~~~l~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~  247 (372)
                      .++ .+.|||++++++++++|++|||+|+ |++|++++|+++.. |+ .|+++++++++.++++++|++.++++.+  .+
T Consensus       151 ~l~~~~~ta~~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~  227 (347)
T 1jvb_A          151 PLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRAGADYVINASM--QD  227 (347)
T ss_dssp             GGGTHHHHHHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SC
T ss_pred             cchhhHHHHHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHhCCCEEecCCC--cc
Confidence            776 5678999998899999999999998 59999999999999 99 6888989999999999999998887643  56


Q ss_pred             HHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCC-CCccccchhhhccCcEEEeeccC-CCcHHH
Q 017426          248 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY-KNTWPL  325 (372)
Q Consensus       248 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~  325 (372)
                      +.+.+.++..  .+++|++||++|++..++.++++|+++|+++.+|... .. .++...+..+++++.++... .+++++
T Consensus       228 ~~~~~~~~~~--~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~  304 (347)
T 1jvb_A          228 PLAEIRRITE--SKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITLSEIQFVGSLVGNQSDFLG  304 (347)
T ss_dssp             HHHHHHHHTT--TSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHHHTCEEEECCSCCHHHHHH
T ss_pred             HHHHHHHHhc--CCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-CCCHHHHHhCceEEEEEeccCHHHHHH
Confidence            6666665531  1589999999998778899999999999999998655 43 55556677899999998765 467899


Q ss_pred             HHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          326 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       326 ~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +++++++|.+  ++.++++|++  +++++|++.+.+++..||+|+++
T Consensus       305 ~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          305 IMRLAEAGKV--KPMITKTMKL--EEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             HHHHHHTTSS--CCCCEEEEEG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHcCCC--CceEEEEEcH--HHHHHHHHHHHCCCCcceEEecC
Confidence            9999999998  6778899999  99999999999988889999975

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=3.5e-53  Score=401.96  Aligned_cols=336  Identities=22%  Similarity=0.395  Sum_probs=287.3

Q ss_pred             cceeEEEecCCceeEEEecCCCC-CC-----CcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecC
Q 017426           17 VNMAAWLLGVNTLKIQPFELPSL-GP-----YDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (372)
Q Consensus        17 ~~~~~~~~~~~~l~~~~~~~p~~-~~-----~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (372)
                      +||++++.+++.+++.++|.|.| ++     +||+|||.++|+|++|++++.|..    ...+|.++|||++|+|+++|+
T Consensus         2 ~MkA~~~~~~~~l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~----~~~~p~v~GhE~~G~V~~vG~   77 (398)
T 2dph_A            2 GNKSVVYHGTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRF----IVPKGHVLGHEITGEVVEKGS   77 (398)
T ss_dssp             CEEEEEEEETTEEEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSS----CCCTTCBCCCCEEEEEEEECT
T ss_pred             ccEEEEEEcCCCEEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCC----CCCCCcccCCceEEEEEEECC
Confidence            58999999989999999999998 68     999999999999999999998742    246799999999999999999


Q ss_pred             CCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCC--c------ccccc--CCCCCcceeEEEecCC--ceE
Q 017426           91 EVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE--M------KFFAT--PPVHGSLANQVVHPAD--LCF  158 (372)
Q Consensus        91 ~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~--~~~~g~~~e~~~v~~~--~~~  158 (372)
                      +|++|++        ||||++.+...|+.|++|..++.++|++  .      ..++.  ....|+|+||+.++++  .++
T Consensus        78 ~v~~~~v--------GDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~  149 (398)
T 2dph_A           78 DVELMDI--------GDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLL  149 (398)
T ss_dssp             TCCSCCT--------TCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCE
T ss_pred             CCCCCCC--------CCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEE
Confidence            9999999        9999999999999999999999999987  2      12232  1357999999999987  899


Q ss_pred             ECCCCCCccc----ccccc-hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh
Q 017426          159 KLPDNVSLEE----GAMCE-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI  233 (372)
Q Consensus       159 ~~P~~~~~~~----aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l  233 (372)
                      ++|+++++++    |+.++ +++|||++++.+++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++
T Consensus       150 ~iP~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l  229 (398)
T 2dph_A          150 KFGDKEQAMEKIKDLTLISDILPTGFHGCVSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA  229 (398)
T ss_dssp             ECSSHHHHHHTHHHHTTTTTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT
T ss_pred             ECCCCCChhhhcchhhhhcCHHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc
Confidence            9999999987    66665 788999999889999999999999999999999999999997799999999999999999


Q ss_pred             CCCeEEecCCCcccH-HHHHHHHHHHcCCcceEEEeCCCcH--------------HHHHHHHHHhccCCEEEEEcCCC--
Q 017426          234 GADNIVKVSTNLQDI-AEEVEKIQKAMGTGIDVSFDCAGLN--------------KTMSTALGATCAGGKVCLVGMGH--  296 (372)
Q Consensus       234 g~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~d~vid~~g~~--------------~~~~~~~~~l~~~G~~v~~g~~~--  296 (372)
                      |++ ++++..  .++ .+.+++++  .+.++|+|||++|+.              ..++.++++|+++|+++.+|...  
T Consensus       230 Ga~-~i~~~~--~~~~~~~~~~~~--~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~  304 (398)
T 2dph_A          230 GFE-TIDLRN--SAPLRDQIDQIL--GKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGS  304 (398)
T ss_dssp             TCE-EEETTS--SSCHHHHHHHHH--SSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSC
T ss_pred             CCc-EEcCCC--cchHHHHHHHHh--CCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecccccc
Confidence            995 776643  454 67776664  345899999999975              26889999999999999998652  


Q ss_pred             -----------CCccccchhhhccCcEEEeeccC-CCcHHHHHHHHHcCCCC--CCCceEEEecCChHHHHHHHHHHhcC
Q 017426          297 -----------HEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID--VKPLVTHRFGFSQKEVEEAFETSARG  362 (372)
Q Consensus       297 -----------~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~~g~~~--~~~~~~~~~~~~~~~~~~A~~~~~~~  362 (372)
                                 ....++...+..+++++.++... .+.++++++++++|++.  +.++++++|++  +++++|++.+.++
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l--~~~~~A~~~~~~~  382 (398)
T 2dph_A          305 DPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITL--DQAPDGYAKFDKG  382 (398)
T ss_dssp             CSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCCGGGTHHHHHHHHHTTCCHHHHHHHCEEEECS--TTHHHHHHHHHTT
T ss_pred             ccccccccccCCcccccHHHHhhcCCEEEEeccCcHHHHHHHHHHHHcCCCCccchhhEEEEEcH--HHHHHHHHHHhcC
Confidence                       12234455677889999887654 56789999999999995  55578899999  9999999999988


Q ss_pred             CCceEEEEeC
Q 017426          363 GTAIKVMFNL  372 (372)
Q Consensus       363 ~~~gkvvv~~  372 (372)
                      .. +|+|+++
T Consensus       383 ~~-gKvvv~~  391 (398)
T 2dph_A          383 SP-AKFVIDP  391 (398)
T ss_dssp             CS-CEEEECT
T ss_pred             Cc-eEEEEec
Confidence            77 9999864

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=7.1e-53  Score=400.50  Aligned_cols=337  Identities=25%  Similarity=0.422  Sum_probs=290.2

Q ss_pred             hhcceeEEEecCCceeEEEecCCC-CCCCcEEEEEeeeeeCcccHHhhhhcccCC----cccCCCcccccceeEEEEEec
Q 017426           15 EEVNMAAWLLGVNTLKIQPFELPS-LGPYDVLVRMKAVGICGSDVHYLKTLRCAD----FVVKEPMVIGHECAGVIEKVG   89 (372)
Q Consensus        15 ~~~~~~~~~~~~~~l~~~~~~~p~-~~~~evlV~v~~~~~~~~d~~~~~g~~~~~----~~~~~p~~~G~e~~G~V~~vG   89 (372)
                      +.+|+++++..+..+++.++|.|. |+++||+|||.++|+|++|++++.|...+.    ...++|.++|||++|+|+++|
T Consensus        28 ~~~m~a~~~~~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG  107 (404)
T 3ip1_A           28 KLTWLGSKVWRYPEVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAG  107 (404)
T ss_dssp             TBBSCGGGTEEEEEEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEEC
T ss_pred             hhhcceEEEEeCCceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEEC
Confidence            345666666655689999999999 999999999999999999999988643221    124679999999999999999


Q ss_pred             CCC------ccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCC
Q 017426           90 SEV------KTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN  163 (372)
Q Consensus        90 ~~v------~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~  163 (372)
                      ++|      ++|++        ||||++.+..+|+.|++|..++.++|++...++. ..+|+|+||+.+|++.++++|++
T Consensus       108 ~~v~~~~~~~~~~v--------GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~  178 (404)
T 3ip1_A          108 PEAINRRTNKRFEI--------GEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGF-NVDGAFAEYVKVDAKYAWSLREL  178 (404)
T ss_dssp             TTCEETTTTEECCT--------TCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGEEECGGG
T ss_pred             CCccccccCCCCCC--------CCEEEECCccCCCCCHHHHCcCcccCccccccCC-CCCCCCcceEEechHHeEecccc
Confidence            999      89999        9999999999999999999999999999988776 57899999999999999999998


Q ss_pred             CCc------cccccc-chhHHHHHHHH-h-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC
Q 017426          164 VSL------EEGAMC-EPLSVGVHACR-R-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG  234 (372)
Q Consensus       164 ~~~------~~aa~~-~~~~~a~~~l~-~-~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg  234 (372)
                      +++      .+++.+ .+++|||+++. . +++++|++|||+|+|++|++++|+|+.+|+..|++++++++|.++++++|
T Consensus       179 ~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lG  258 (404)
T 3ip1_A          179 EGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELG  258 (404)
T ss_dssp             BTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHT
T ss_pred             ccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcC
Confidence            763      335544 48889999995 3 58999999999999999999999999999978999999999999999999


Q ss_pred             CCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcH-HHHHHHHHHh----ccCCEEEEEcCCCCCccccchhhhcc
Q 017426          235 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN-KTMSTALGAT----CAGGKVCLVGMGHHEMTVPLTPAAVR  309 (372)
Q Consensus       235 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l----~~~G~~v~~g~~~~~~~~~~~~~~~~  309 (372)
                      ++.++++..  +++.+.+++++  .+.++|+|||++|++ ..+..+.+.|    +++|+++.+|.......++...+..+
T Consensus       259 a~~vi~~~~--~~~~~~i~~~t--~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~  334 (404)
T 3ip1_A          259 ADHVIDPTK--ENFVEAVLDYT--NGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVR  334 (404)
T ss_dssp             CSEEECTTT--SCHHHHHHHHT--TTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCEEECHHHHHHT
T ss_pred             CCEEEcCCC--CCHHHHHHHHh--CCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCCcccHHHHhcc
Confidence            999987643  67888887764  356899999999987 3667777788    99999999998776667778888899


Q ss_pred             CcEEEeeccC--CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          310 EVDVVGVFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       310 ~~~i~~~~~~--~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                      ++++.++...  .+.++++++++++| +.+.+.++++|++  +++++|++.+..    ||+|++
T Consensus       335 ~~~i~g~~~~~~~~~~~~~~~ll~~g-l~~~~~i~~~~~l--~~~~~A~~~~~~----GKvvl~  391 (404)
T 3ip1_A          335 RAQIVGSQGHSGHGTFPRVISLMASG-MDMTKIISKTVSM--EEIPEYIKRLQT----DKSLVK  391 (404)
T ss_dssp             TCEEEECCCCCSTTHHHHHHHHHHTT-CCGGGGCCEEECG--GGHHHHHHHTTT----CTTCSC
T ss_pred             ceEEEEecCCCchHHHHHHHHHHHcC-CChhheEEEEeeH--HHHHHHHHHHhC----CcEEEe
Confidence            9999998754  67899999999999 8777889999999  999999999873    466654

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.3e-52  Score=396.59  Aligned_cols=337  Identities=22%  Similarity=0.383  Sum_probs=284.5

Q ss_pred             cceeEEEecCCceeEEEecCCCCC-CCc------EEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEec
Q 017426           17 VNMAAWLLGVNTLKIQPFELPSLG-PYD------VLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG   89 (372)
Q Consensus        17 ~~~~~~~~~~~~l~~~~~~~p~~~-~~e------vlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   89 (372)
                      +||++++.+++.+++.++|.|+|+ ++|      |+|||.++|+|++|++++.|.+.    ..+|.++|||++|+|+++|
T Consensus         2 ~Mka~~~~~~~~l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----~~~p~v~GhE~~G~V~~vG   77 (398)
T 1kol_A            2 GNRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT----AQVGLVLGHEITGEVIEKG   77 (398)
T ss_dssp             CEEEEEEEETTEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC----CCTTCBCCCCEEEEEEEEC
T ss_pred             ccEEEEEecCCceEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC----CCCCcccCcccEEEEEEEC
Confidence            589999998889999999999996 898      99999999999999999987431    3568999999999999999


Q ss_pred             CCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcc------cccc---CCCCCcceeEEEecCC--ceE
Q 017426           90 SEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK------FFAT---PPVHGSLANQVVHPAD--LCF  158 (372)
Q Consensus        90 ~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~g~~~e~~~v~~~--~~~  158 (372)
                      ++|++|++        ||||++.+..+|+.|++|..++.++|++..      .++.   ....|+|+||+.+|++  .++
T Consensus        78 ~~v~~~~v--------GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~  149 (398)
T 1kol_A           78 RDVENLQI--------GDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLL  149 (398)
T ss_dssp             TTCCSCCT--------TCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCE
T ss_pred             CCCCcCCC--------CCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEE
Confidence            99999999        999999888999999999999999998764      2232   1356999999999987  899


Q ss_pred             ECCCCCCccc----ccccc-hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh
Q 017426          159 KLPDNVSLEE----GAMCE-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI  233 (372)
Q Consensus       159 ~~P~~~~~~~----aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l  233 (372)
                      ++|+++++.+    ++.++ ++.|||++++.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|.++++++
T Consensus       150 ~~P~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l  229 (398)
T 1kol_A          150 KLPDRDKAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ  229 (398)
T ss_dssp             ECSCHHHHHHTHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT
T ss_pred             ECCCCcchhhhcccccccccHHHHHHHHHHHcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc
Confidence            9999999887    55555 788999999889999999999999999999999999999997799999999999999999


Q ss_pred             CCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcH---------------HHHHHHHHHhccCCEEEEEcCC-CC
Q 017426          234 GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN---------------KTMSTALGATCAGGKVCLVGMG-HH  297 (372)
Q Consensus       234 g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---------------~~~~~~~~~l~~~G~~v~~g~~-~~  297 (372)
                      |++ ++++.. ..++.+.+++++  .+.++|+|||++|++               ..++.++++|+++|+++.+|.. ..
T Consensus       230 Ga~-~i~~~~-~~~~~~~v~~~t--~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~  305 (398)
T 1kol_A          230 GFE-IADLSL-DTPLHEQIAALL--GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTE  305 (398)
T ss_dssp             TCE-EEETTS-SSCHHHHHHHHH--SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSC
T ss_pred             CCc-EEccCC-cchHHHHHHHHh--CCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCC
Confidence            997 666543 234777777664  356899999999975               3788999999999999999864 11


Q ss_pred             ------------CccccchhhhccCcEEEeeccC-CCcHHHHHHHHHcCCCC-CCCceEEEecCChHHHHHHHHHHhcCC
Q 017426          298 ------------EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID-VKPLVTHRFGFSQKEVEEAFETSARGG  363 (372)
Q Consensus       298 ------------~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~~g~~~-~~~~~~~~~~~~~~~~~~A~~~~~~~~  363 (372)
                                  ...++...+..+++++.+.... .+.++++++++++|.+. ..+.++++|++  +++++|++.+.++.
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l--~~~~~A~~~~~~~~  383 (398)
T 1kol_A          306 DPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISL--DDAPRGYGEFDAGV  383 (398)
T ss_dssp             CTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTSCCHHHHHTEEEECG--GGHHHHHHHHHHTC
T ss_pred             cccccccccccccccccHHHHhhcccEEEecccChHHHHHHHHHHHHcCCCCCccceeEEEEcH--HHHHHHHHHHhCCC
Confidence                        1233444567788888876533 45678999999999994 23567899999  99999999998887


Q ss_pred             CceEEEEeC
Q 017426          364 TAIKVMFNL  372 (372)
Q Consensus       364 ~~gkvvv~~  372 (372)
                      . +|+|+++
T Consensus       384 ~-gKvvi~~  391 (398)
T 1kol_A          384 P-KKFVIDP  391 (398)
T ss_dssp             S-CEEEECT
T ss_pred             c-eEEEEEe
Confidence            6 9999874

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=2.2e-53  Score=397.83  Aligned_cols=327  Identities=19%  Similarity=0.299  Sum_probs=284.1

Q ss_pred             ceeEEEecCCc-eeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCC---CcccccceeEEEEEecCCCc
Q 017426           18 NMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE---PMVIGHECAGVIEKVGSEVK   93 (372)
Q Consensus        18 ~~~~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~---p~~~G~e~~G~V~~vG~~v~   93 (372)
                      ||++++.+++. +++.++|.|+|+++||+|||+++|+|++|++++.|.+..   ..+   |.++|||++| |+++|++ +
T Consensus         1 MkA~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~~~~p~v~G~E~~G-V~~vG~~-~   75 (357)
T 2b5w_A            1 MKAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGG---FPEGEDHLVLGHEAVG-VVVDPND-T   75 (357)
T ss_dssp             CEEEEEETTCSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTT---SCTTCSEEECCSEEEE-EEEECTT-S
T ss_pred             CeEEEEeCCCCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCC---CCCCCCCcccCceeEE-EEEECCC-C
Confidence            68999988777 999999999999999999999999999999999875321   345   8999999999 9999999 9


Q ss_pred             cccccccccCCCCCEEEEcCCcC--CCCCccccCCCCCCCCCcccc--ccCCCCCcceeEEEecCCceEECCCCCCcccc
Q 017426           94 TLVPGDRVTLVPGDRVALEPGIS--CWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPADLCFKLPDNVSLEEG  169 (372)
Q Consensus        94 ~~~~gd~v~~~~Gd~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~a  169 (372)
                      +|++        ||||++.+...  |++|++|..++.++|++...+  +....+|+|+||+.+|++.++++|++++ ++|
T Consensus        76 ~~~v--------GdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~~a  146 (357)
T 2b5w_A           76 ELEE--------GDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-ELG  146 (357)
T ss_dssp             SCCT--------TCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-TTG
T ss_pred             CCCC--------CCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-hhh
Confidence            9999        99999988878  999999999999999998776  4323579999999999999999999999 777


Q ss_pred             cccchhHHHHHHHHhcCCCCC------CEEEEECCCHHHHHH-HHHH-HHcCCCeEEEEecChh---HHHHHHHhCCCeE
Q 017426          170 AMCEPLSVGVHACRRANIGPE------TNVLIMGAGPIGLVT-MLAA-RAFGAPRIVIVDVDDY---RLSVAKEIGADNI  238 (372)
Q Consensus       170 a~~~~~~~a~~~l~~~~~~~g------~~vlI~Gag~~G~~a-i~l~-~~~g~~~vv~v~~~~~---~~~~~~~lg~~~v  238 (372)
                      ++..+++|||++++.+++++|      ++|||+|+|++|+++ +|+| +.+|++.|++++++++   +.++++++|++.+
T Consensus       147 al~~~~~ta~~al~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v  226 (357)
T 2b5w_A          147 FLIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV  226 (357)
T ss_dssp             GGHHHHHHHHHHHHHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE
T ss_pred             hhhchHHHHHHHHHhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc
Confidence            766688999999988889999      999999999999999 9999 9999976899999998   9999999999988


Q ss_pred             EecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCC-CCccccchhh----hccCcEE
Q 017426          239 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPA----AVREVDV  313 (372)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~----~~~~~~i  313 (372)
                       ++.+  +++.+ ++++   .+ ++|+|||++|++..++.++++++++|+++.+|... ....++...+    ..+++++
T Consensus       227 -~~~~--~~~~~-i~~~---~g-g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i  298 (357)
T 2b5w_A          227 -DSRQ--TPVED-VPDV---YE-QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKAL  298 (357)
T ss_dssp             -ETTT--SCGGG-HHHH---SC-CEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEE
T ss_pred             -CCCc--cCHHH-HHHh---CC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeEE
Confidence             7643  56666 6655   24 89999999999778899999999999999998655 4445555566    7899999


Q ss_pred             EeeccC-CCcHHHHHHHHHcC--CCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          314 VGVFRY-KNTWPLCLELLRSG--KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       314 ~~~~~~-~~~~~~~~~ll~~g--~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      .++... .++++++++++++|  .+ +.+.++++|++  +++++|++.+   ...+|+|+++
T Consensus       299 ~g~~~~~~~~~~~~~~l~~~g~~~~-~~~~i~~~~~l--~~~~~A~~~~---~~~gKvvi~~  354 (357)
T 2b5w_A          299 VGSVNSHVEHFEAATVTFTKLPKWF-LEDLVTGVHPL--SEFEAAFDDD---DTTIKTAIEF  354 (357)
T ss_dssp             EECCCCCHHHHHHHHHHHHHSCHHH-HHHHEEEEEEG--GGGGGGGCCS---TTCCEEEEEC
T ss_pred             EEeccCCHHHHHHHHHHHHhCchhh-hhhhcceeecH--HHHHHHHHHh---CCCceEEEEe
Confidence            998765 56799999999999  84 47788899999  9999999987   3578999875

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.3e-52  Score=390.93  Aligned_cols=333  Identities=21%  Similarity=0.295  Sum_probs=277.5

Q ss_pred             chhcceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCC
Q 017426           14 GEEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (372)
Q Consensus        14 ~~~~~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (372)
                      ..++|++....++ +.+++.++|.|+|+++||+|||.++|+|++|++++.|...   ...+|.++|||++|+|+++|++|
T Consensus        19 ~~~~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~P~v~GhE~~G~V~~vG~~V   95 (369)
T 1uuf_A           19 AGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWA---GTVYPCVPGHEIVGRVVAVGDQV   95 (369)
T ss_dssp             ----CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTS---CCCSSBCCCCCEEEEEEEECTTC
T ss_pred             cCceEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCC---CCCCCeecccCceEEEEEECCCC
Confidence            4456888777654 7899999999999999999999999999999999987432   13579999999999999999999


Q ss_pred             ccccccccccCCCCCEEEEcCCc-CCCCCccccCCCCCCCCCcc-ccc------cCCCCCcceeEEEecCCceEECCCC-
Q 017426           93 KTLVPGDRVTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMK-FFA------TPPVHGSLANQVVHPADLCFKLPDN-  163 (372)
Q Consensus        93 ~~~~~gd~v~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~g~~~e~~~v~~~~~~~~P~~-  163 (372)
                      ++|++        ||||++.+.. .|+.|.+|..+++++|++.. .+.      +....|+|+||+.+|++.++++|++ 
T Consensus        96 ~~~~v--------GDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~  167 (369)
T 1uuf_A           96 EKYAP--------GDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQ  167 (369)
T ss_dssp             CSCCT--------TCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCG
T ss_pred             CCCCC--------CCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCC
Confidence            99999        9999987664 59999999999999999763 110      1135699999999999999999999 


Q ss_pred             CCcccccccc-hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecC
Q 017426          164 VSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  242 (372)
Q Consensus       164 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~  242 (372)
                      +++++|+.++ .+.|||++++++++++|++|||+|+|++|++++|+|+.+|+ .|+++++++++.++++++|++.++++.
T Consensus       168 ls~~~aa~l~~~~~tA~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~lGa~~vi~~~  246 (369)
T 1uuf_A          168 EQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNSR  246 (369)
T ss_dssp             GGHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEETT
T ss_pred             CCHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEeccc
Confidence            9999998776 67899999988899999999999999999999999999999 488999999999999999999988764


Q ss_pred             CCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCc-cccchhhhccCcEEEeeccC-C
Q 017426          243 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY-K  320 (372)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-~  320 (372)
                      +  +++   +.++    ..++|++||++|.+..++.+++.|+++|+++.+|...... .++...+..+++++.++... .
T Consensus       247 ~--~~~---~~~~----~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  317 (369)
T 1uuf_A          247 N--ADE---MAAH----LKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGI  317 (369)
T ss_dssp             C--HHH---HHTT----TTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCH
T ss_pred             c--HHH---HHHh----hcCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEEeecCCH
Confidence            3  232   2222    2589999999998667889999999999999998755433 45556677899999998765 4


Q ss_pred             CcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          321 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       321 ~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ++++++++++++|.+  .+.+ ++|++  +++++|++.+.++...+|+|+++
T Consensus       318 ~~~~~~~~l~~~g~i--~~~i-~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  364 (369)
T 1uuf_A          318 PETQEMLDFCAEHGI--VADI-EMIRA--DQINEAYERMLRGDVKYRFVIDN  364 (369)
T ss_dssp             HHHHHHHHHHHHHTC--CCCE-EEECG--GGHHHHHHHHHTTCSSSEEEEEG
T ss_pred             HHHHHHHHHHHhCCC--Ccce-EEEcH--HHHHHHHHHHHcCCCceEEEEec
Confidence            678999999999998  4444 56888  99999999999988889999864

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=8.8e-52  Score=386.84  Aligned_cols=333  Identities=21%  Similarity=0.331  Sum_probs=280.0

Q ss_pred             cchhcceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCC
Q 017426           13 DGEEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (372)
Q Consensus        13 ~~~~~~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (372)
                      +.+++|++....++ +.+++.++|.|.|+++||+|||.++|+|++|++.+.|.+..   ..+|.++|||++|+|+++|++
T Consensus         5 ~~~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~P~v~GhE~~G~V~~vG~~   81 (357)
T 2cf5_A            5 EAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGM---SNYPMVPGHEVVGEVVEVGSD   81 (357)
T ss_dssp             -CCCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTC---CCSSBCCCCEEEEEEEEECSS
T ss_pred             cCcceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCC---CCCCeecCcceeEEEEEECCC
Confidence            34566788777754 78999999999999999999999999999999998874321   357999999999999999999


Q ss_pred             CccccccccccCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCceEECCCCC
Q 017426           92 VKTLVPGDRVTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNV  164 (372)
Q Consensus        92 v~~~~~gd~v~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~v~~~~~~~~P~~~  164 (372)
                      |++|++        ||||++.+. .+|++|++|..++.++|++..+..      +...+|+|+||+.+|++.++++|+++
T Consensus        82 v~~~~v--------GdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~l  153 (357)
T 2cf5_A           82 VSKFTV--------GDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGM  153 (357)
T ss_dssp             CCSCCT--------TCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSC
T ss_pred             CCCCCC--------CCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCC
Confidence            999999        999987654 579999999999999997554321      11357999999999999999999999


Q ss_pred             Ccccccccc-hhHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-HhCCCeEEec
Q 017426          165 SLEEGAMCE-PLSVGVHACRRANIG-PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKV  241 (372)
Q Consensus       165 ~~~~aa~~~-~~~~a~~~l~~~~~~-~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~lg~~~v~~~  241 (372)
                      ++++|+.++ .+.|||+++++.+++ +|++|||+|+|++|++++|+|+.+|+ .|+++++++++.++++ ++|++.++++
T Consensus       154 s~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~vi~~  232 (357)
T 2cf5_A          154 AVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGADDYVIG  232 (357)
T ss_dssp             CHHHHTGGGTHHHHHHHHHHHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCCSCEEET
T ss_pred             CHHHhhhhhhhHHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCCceeecc
Confidence            999999776 667899999888888 99999999999999999999999999 6888989999998887 9999998876


Q ss_pred             CCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCcc-ccchhhhccCcEEEeeccC-
Q 017426          242 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT-VPLTPAAVREVDVVGVFRY-  319 (372)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~-  319 (372)
                      ++  .   +.++++    .+++|++||++|.+..++.++++++++|+++.+|....... ++.. +..+++++.++..+ 
T Consensus       233 ~~--~---~~~~~~----~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~i~g~~~~~  302 (357)
T 2cf5_A          233 SD--Q---AKMSEL----ADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL-LMLGRKVITGSFIGS  302 (357)
T ss_dssp             TC--H---HHHHHS----TTTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH-HHHHTCEEEECCSCC
T ss_pred             cc--H---HHHHHh----cCCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH-HHhCccEEEEEccCC
Confidence            43  1   233333    24899999999976578899999999999999986543333 4444 77889999998765 


Q ss_pred             CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          320 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       320 ~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      .++++++++++++|++.  +.+ ++|++  +++++|++.+.++...+|+|+++
T Consensus       303 ~~~~~~~~~l~~~g~l~--~~~-~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  350 (357)
T 2cf5_A          303 MKETEEMLEFCKEKGLS--SII-EVVKM--DYVNTAFERLEKNDVRYRFVVDV  350 (357)
T ss_dssp             HHHHHHHHHHHHHTTCC--CCE-EEEEG--GGHHHHHHHHHTTCSSSEEEEET
T ss_pred             HHHHHHHHHHHHcCCCC--Cce-EEEeH--HHHHHHHHHHHCCCCceEEEEeC
Confidence            46789999999999984  444 78999  99999999999988889999874

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=4.1e-51  Score=383.43  Aligned_cols=344  Identities=22%  Similarity=0.314  Sum_probs=279.5

Q ss_pred             CCCCCccccccchhcceeEEEe-cCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccce
Q 017426            3 KGGMSQGEKEDGEEVNMAAWLL-GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHEC   81 (372)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~   81 (372)
                      -.+|+....+..++++++.... +++.+++.++|.|.|+++||+|||.++|+|++|++++.|.+..   ..+|.++|||+
T Consensus         2 ~~~~~~~~~~~~~mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~P~v~GhE~   78 (366)
T 1yqd_A            2 SHGMSKSPEEEHPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGF---SMYPLVPGHEI   78 (366)
T ss_dssp             ------CHHHHSSEEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSC---CCSSBCCCCCE
T ss_pred             CCccCCCcchhCCeeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCC---CCCCEecccce
Confidence            3456664333333344444444 3578999999999999999999999999999999999875421   35799999999


Q ss_pred             eEEEEEecCCCccccccccccCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecC
Q 017426           82 AGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPA  154 (372)
Q Consensus        82 ~G~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~v~~  154 (372)
                      +|+|+++|++|++|++        ||||++.+. .+|+.|++|..++.++|+......      +....|+|+||+.+|+
T Consensus        79 ~G~V~~vG~~V~~~~v--------GDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~  150 (366)
T 1yqd_A           79 VGEVTEVGSKVKKVNV--------GDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANE  150 (366)
T ss_dssp             EEEEEEECTTCCSCCT--------TCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEG
T ss_pred             EEEEEEECCCCCcCCC--------CCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEch
Confidence            9999999999999999        999987654 579999999999999996553211      1135799999999999


Q ss_pred             CceEECCCCCCcccccccc-hhHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-
Q 017426          155 DLCFKLPDNVSLEEGAMCE-PLSVGVHACRRANIG-PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-  231 (372)
Q Consensus       155 ~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~~~~~-~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-  231 (372)
                      +.++++|+++++++|+.++ .+.|||+++++.+++ +|++|||+|+|++|++++|+|+.+|+ .|+++++++++.+.++ 
T Consensus       151 ~~~~~~P~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~  229 (366)
T 1yqd_A          151 RYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALK  229 (366)
T ss_dssp             GGCEECCTTSCTTTTGGGGTHHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHH
T ss_pred             hhEEECCCCCCHHHhhhhhhhHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence            9999999999999999776 667899999888888 99999999999999999999999999 6888888999888876 


Q ss_pred             HhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCc
Q 017426          232 EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREV  311 (372)
Q Consensus       232 ~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  311 (372)
                      ++|++.++++.+  .   +.++++    .+++|+|||++|.+..++.+++.|+++|+++.++.......++...+..+++
T Consensus       230 ~lGa~~v~~~~~--~---~~~~~~----~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~  300 (366)
T 1yqd_A          230 NFGADSFLVSRD--Q---EQMQAA----AGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRK  300 (366)
T ss_dssp             TSCCSEEEETTC--H---HHHHHT----TTCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCEEECHHHHHTTTC
T ss_pred             hcCCceEEeccC--H---HHHHHh----hCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCCCcCHHHHHhCCc
Confidence            899999887643  1   234333    2489999999997656789999999999999998755444556666788999


Q ss_pred             EEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          312 DVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       312 ~i~~~~~~-~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ++.++... .++++++++++++|.+.  +.+ ++|++  +++++|++.+.++...+|+|+++
T Consensus       301 ~i~g~~~~~~~~~~~~~~l~~~g~l~--~~~-~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  357 (366)
T 1yqd_A          301 IVAGSGIGGMKETQEMIDFAAKHNIT--ADI-EVIST--DYLNTAMERLAKNDVRYRFVIDV  357 (366)
T ss_dssp             EEEECCSCCHHHHHHHHHHHHHTTCC--CCE-EEECG--GGHHHHHHHHHTTCCSSEEEECH
T ss_pred             EEEEecCCCHHHHHHHHHHHHcCCCC--Cce-EEEcH--HHHHHHHHHHHcCCcceEEEEEc
Confidence            99998765 45789999999999994  444 68888  99999999999998889999863

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=7e-51  Score=392.50  Aligned_cols=345  Identities=21%  Similarity=0.206  Sum_probs=292.2

Q ss_pred             cccchhcceeEEEecC----------------CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhccc--------
Q 017426           11 KEDGEEVNMAAWLLGV----------------NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRC--------   66 (372)
Q Consensus        11 ~~~~~~~~~~~~~~~~----------------~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~--------   66 (372)
                      +++.|.+||++++.++                ..+++.++|.|+|+|+||+|||.++|||++|++...+...        
T Consensus        24 ~~~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~  103 (456)
T 3krt_A           24 ALPLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLER  103 (456)
T ss_dssp             HSCCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHH
T ss_pred             cCCCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhh
Confidence            4457788999999975                5889999999999999999999999999999876532110        


Q ss_pred             ----CC--cccCCC-cccccceeEEEEEecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc
Q 017426           67 ----AD--FVVKEP-MVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT  139 (372)
Q Consensus        67 ----~~--~~~~~p-~~~G~e~~G~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (372)
                          +.  ....+| .++|||++|+|+++|++|++|++        ||||++.+. .|..|..|..+..++|++...++.
T Consensus       104 ~g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~v--------GdrV~~~~~-~c~~~~~~~~~~~~~c~~~~~~G~  174 (456)
T 3krt_A          104 YGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQA--------GDEVVAHCL-SVELESSDGHNDTMLDPEQRIWGF  174 (456)
T ss_dssp             HHTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCT--------TCEEEECCE-ECCCCSGGGTTSGGGCTTCEETTT
T ss_pred             ccccccccccCCCCcccccceeEEEEEEECCCCCCCCC--------CCEEEEeCC-cccccccccccccccCcccccccc
Confidence                00  012457 69999999999999999999999        999988654 688899999999999999999998


Q ss_pred             CCCCCcceeEEEecCCceEECCCCCCcccccccc-hhHHHHHHHHh---cCCCCCCEEEEECC-CHHHHHHHHHHHHcCC
Q 017426          140 PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACRR---ANIGPETNVLIMGA-GPIGLVTMLAARAFGA  214 (372)
Q Consensus       140 ~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~---~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~  214 (372)
                      ...+|+|+||+.+|+++++++|+++++++|++++ ++.|||+++..   +++++|++|||+|+ |++|++++|+|+.+|+
T Consensus       175 ~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga  254 (456)
T 3krt_A          175 ETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGA  254 (456)
T ss_dssp             TSSSCSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC
T ss_pred             CCCCCcccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCC
Confidence            7667999999999999999999999999999887 67899999843   78999999999998 9999999999999999


Q ss_pred             CeEEEEecChhHHHHHHHhCCCeEEecCCCcc---------------cHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHH
Q 017426          215 PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ---------------DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTA  279 (372)
Q Consensus       215 ~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~---------------~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~  279 (372)
                       .++++++++++.++++++|++.++++...+.               ++.+.+++++  .+.++|+|||++|+ ..+..+
T Consensus       255 -~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t--~g~g~Dvvid~~G~-~~~~~~  330 (456)
T 3krt_A          255 -NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELT--GGEDIDIVFEHPGR-ETFGAS  330 (456)
T ss_dssp             -EEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHH--TSCCEEEEEECSCH-HHHHHH
T ss_pred             -eEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHh--CCCCCcEEEEcCCc-hhHHHH
Confidence             5777778999999999999999988754321               2335555543  35799999999998 689999


Q ss_pred             HHHhccCCEEEEEcCCCC-CccccchhhhccCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHH
Q 017426          280 LGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE  357 (372)
Q Consensus       280 ~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~  357 (372)
                      +++++++|+++.+|.... ...++...+..+.+++.++... .+.+.++++++++|.+  ++.++++|++  +++++|++
T Consensus       331 ~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~eA~~  406 (456)
T 3krt_A          331 VFVTRKGGTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRI--HPTLSKVYSL--EDTGQAAY  406 (456)
T ss_dssp             HHHEEEEEEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSS--CCCEEEEEEG--GGHHHHHH
T ss_pred             HHHhhCCcEEEEEecCCCcccccCHHHHHhcCeEEEEeccCCHHHHHHHHHHHHcCCc--ccceeEEEcH--HHHHHHHH
Confidence            999999999999986543 3355666778888999998765 4567789999999999  6788999999  99999999


Q ss_pred             HHhcCCCceEEEEeC
Q 017426          358 TSARGGTAIKVMFNL  372 (372)
Q Consensus       358 ~~~~~~~~gkvvv~~  372 (372)
                      .+.++...||+|+.+
T Consensus       407 ~l~~~~~~GKvvv~~  421 (456)
T 3krt_A          407 DVHRNLHQGKVGVLC  421 (456)
T ss_dssp             HHHTTCSSSEEEEES
T ss_pred             HHHhCCCCCcEEEEe
Confidence            999999999998863

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=2.2e-50  Score=388.50  Aligned_cols=343  Identities=21%  Similarity=0.254  Sum_probs=288.9

Q ss_pred             cccchhcceeEEEecCC--------------ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhh-------------h
Q 017426           11 KEDGEEVNMAAWLLGVN--------------TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK-------------T   63 (372)
Q Consensus        11 ~~~~~~~~~~~~~~~~~--------------~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~-------------g   63 (372)
                      ..++|.+||++++.+++              .+++.++|.|.|+++||+|||.++|||++|++...             +
T Consensus        18 ~~~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~   97 (447)
T 4a0s_A           18 AAPVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNA   97 (447)
T ss_dssp             HSCCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHH
T ss_pred             ccCCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhc
Confidence            45678899999999876              89999999999999999999999999999986432             1


Q ss_pred             cccCCc--ccCCC-cccccceeEEEEEecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC
Q 017426           64 LRCADF--VVKEP-MVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP  140 (372)
Q Consensus        64 ~~~~~~--~~~~p-~~~G~e~~G~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (372)
                      .. +..  ...+| .++|||++|+|+++|++|++|++        ||||++.+...|+.|++|. +..++|++...+|..
T Consensus        98 ~~-g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~v--------GDrV~~~~~~~~~~~~~~~-~~~~~c~~~~~~G~~  167 (447)
T 4a0s_A           98 RQ-GGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKP--------GDHVIVHPAHVDEQEPATH-GDGMLGTEQRAWGFE  167 (447)
T ss_dssp             TT-CGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCT--------TCEEEECSEECCTTSGGGG-TCTTCSTTCEETTTT
T ss_pred             cc-CccccccCCCCcccccceeEEEEEECCCCCCCCC--------CCEEEEecCcCcCcccccc-ccccccccccccccc
Confidence            11 111  12456 69999999999999999999999        9999999888888887655 668999999998886


Q ss_pred             CCCCcceeEEEecCCceEECCCCCCcccccccc-hhHHHHHHHH---hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCC
Q 017426          141 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR---RANIGPETNVLIMGA-GPIGLVTMLAARAFGAP  215 (372)
Q Consensus       141 ~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~---~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~  215 (372)
                      ..+|+|+||+.+|++.++++|+++++++|++++ ++.|||+++.   .+++++|++|||+|+ |++|++++|+|+..|+ 
T Consensus       168 ~~~G~~aey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga-  246 (447)
T 4a0s_A          168 TNFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-  246 (447)
T ss_dssp             SSSCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-
T ss_pred             CCCCceeeeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-
Confidence            667999999999999999999999999999886 6779999983   388999999999998 9999999999999999 


Q ss_pred             eEEEEecChhHHHHHHHhCCCeEEecCCCc----------------ccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHH
Q 017426          216 RIVIVDVDDYRLSVAKEIGADNIVKVSTNL----------------QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTA  279 (372)
Q Consensus       216 ~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~----------------~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~  279 (372)
                      .++++++++++.++++++|++.++++...+                ..+.+.+++.+   +.++|++||++|. ..++.+
T Consensus       247 ~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---g~g~Dvvid~~G~-~~~~~~  322 (447)
T 4a0s_A          247 IPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKA---GREPDIVFEHTGR-VTFGLS  322 (447)
T ss_dssp             EEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHH---SSCCSEEEECSCH-HHHHHH
T ss_pred             EEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHh---CCCceEEEECCCc-hHHHHH
Confidence            577777999999999999999988753211                01234444442   6789999999998 488999


Q ss_pred             HHHhccCCEEEEEcCCCC-CccccchhhhccCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHH
Q 017426          280 LGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE  357 (372)
Q Consensus       280 ~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~  357 (372)
                      +.+++++|+++.+|.... ...++...+..+.+++.++..+ .+.+.++++++++|.+  .+.++++|++  +++++|++
T Consensus       323 ~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~  398 (447)
T 4a0s_A          323 VIVARRGGTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAV--VPAMSAVYPL--AEAAEACR  398 (447)
T ss_dssp             HHHSCTTCEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSS--CCCEEEEEEG--GGHHHHHH
T ss_pred             HHHHhcCCEEEEEecCCCcccccCHHHHHhCCCEEEecCCCCHHHHHHHHHHHHcCCc--ccceeEEEcH--HHHHHHHH
Confidence            999999999999986543 3355666678889999998765 3567899999999999  6788999999  99999999


Q ss_pred             HHhcCCCceEEEEeC
Q 017426          358 TSARGGTAIKVMFNL  372 (372)
Q Consensus       358 ~~~~~~~~gkvvv~~  372 (372)
                      .+.++...||+|+.+
T Consensus       399 ~~~~~~~~GKvvv~~  413 (447)
T 4a0s_A          399 VVQTSRQVGKVAVLC  413 (447)
T ss_dssp             HHHTTCCSSEEEEES
T ss_pred             HHhcCCCceEEEEEe
Confidence            999999999998864

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=4.8e-49  Score=367.73  Aligned_cols=314  Identities=22%  Similarity=0.303  Sum_probs=272.8

Q ss_pred             ccccchhcceeEEEec---CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEE
Q 017426           10 EKEDGEEVNMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE   86 (372)
Q Consensus        10 ~~~~~~~~~~~~~~~~---~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~   86 (372)
                      .+++++.+||++++..   ++.+++.++|.|+|+++||+|||.++|+|++|++.+.|.+..  ...+|.++|||++|+|+
T Consensus        21 ~~~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~i~G~E~~G~V~   98 (353)
T 4dup_A           21 QSMSLPQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPP--PKDASPILGLELSGEIV   98 (353)
T ss_dssp             --CCCCSSEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCC--CTTSCSSSCCEEEEEEE
T ss_pred             ecCCCChheeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCCccccccEEEEE
Confidence            4556888899999986   467999999999999999999999999999999999886532  23568999999999999


Q ss_pred             EecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCc
Q 017426           87 KVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSL  166 (372)
Q Consensus        87 ~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~  166 (372)
                      ++|++|++|++        ||||++.                            ...|+|+||+.+|++.++++|+++++
T Consensus        99 ~vG~~v~~~~v--------GdrV~~~----------------------------~~~G~~aey~~v~~~~~~~~P~~~~~  142 (353)
T 4dup_A           99 GVGPGVSGYAV--------GDKVCGL----------------------------ANGGAYAEYCLLPAGQILPFPKGYDA  142 (353)
T ss_dssp             EECTTCCSCCT--------TCEEEEE----------------------------CSSCCSBSEEEEEGGGEEECCTTCCH
T ss_pred             EECCCCCCCCC--------CCEEEEe----------------------------cCCCceeeEEEEcHHHcEeCCCCCCH
Confidence            99999999999        8888752                            23699999999999999999999999


Q ss_pred             ccccccc-hhHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCC
Q 017426          167 EEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  243 (372)
Q Consensus       167 ~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~  243 (372)
                      ++|+.++ +++|||+++ +.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.++++++|++.++++..
T Consensus       143 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~  221 (353)
T 4dup_A          143 VKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGAKRGINYRS  221 (353)
T ss_dssp             HHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTT
T ss_pred             HHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEeCCc
Confidence            9999775 788999999 5689999999999965 9999999999999999 6899999999999999999999887644


Q ss_pred             CcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-cc-ccchhhhccCcEEEeeccCC-
Q 017426          244 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MT-VPLTPAAVREVDVVGVFRYK-  320 (372)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-~~~~~~~~~~~~i~~~~~~~-  320 (372)
                        +++.+.+++..   +.++|++|||+|++ .+..++++|+++|+++.+|..... .. ++...+..+++++.++.... 
T Consensus       222 --~~~~~~~~~~~---~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  295 (353)
T 4dup_A          222 --EDFAAVIKAET---GQGVDIILDMIGAA-YFERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPR  295 (353)
T ss_dssp             --SCHHHHHHHHH---SSCEEEEEESCCGG-GHHHHHHTEEEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTS
T ss_pred             --hHHHHHHHHHh---CCCceEEEECCCHH-HHHHHHHHhccCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEecccc
Confidence              67777777764   67899999999985 889999999999999999865443 23 66777888999999987652 


Q ss_pred             Cc----------HHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          321 NT----------WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       321 ~~----------~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ..          ++++++++++|++  ++.++++|++  +++++|++.+.+++..||+|+++
T Consensus       296 ~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          296 TAEEKRAIRDDLLSEVWPLLEAGTV--APVIHKVFAF--EDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             CHHHHHHHHHHHHHHTHHHHHHTSS--CCCEEEEEEG--GGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             chhhhHHHHHHHHHHHHHHHHCCCc--cCCcceEEeH--HHHHHHHHHHHhCCCCceEEEeC
Confidence            21          7789999999998  7788999999  99999999999998999999985

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=8.5e-51  Score=381.53  Aligned_cols=327  Identities=20%  Similarity=0.322  Sum_probs=279.0

Q ss_pred             ceeEEEecCCc-eeEEEecCCCCCC-CcEEEEEeeeeeCcccHHhhhh--cccCCcccCC---CcccccceeEEEEEecC
Q 017426           18 NMAAWLLGVNT-LKIQPFELPSLGP-YDVLVRMKAVGICGSDVHYLKT--LRCADFVVKE---PMVIGHECAGVIEKVGS   90 (372)
Q Consensus        18 ~~~~~~~~~~~-l~~~~~~~p~~~~-~evlV~v~~~~~~~~d~~~~~g--~~~~~~~~~~---p~~~G~e~~G~V~~vG~   90 (372)
                      ||++++.+++. +++.++|.|.|++ +||+|||.++|+|++|++++.|  .+.   ...+   |.++|||++|+|++  +
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~---~~~~~~~p~v~G~E~~G~V~~--~   75 (366)
T 2cdc_A            1 MKAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLS---TLPKGKDFLVLGHEAIGVVEE--S   75 (366)
T ss_dssp             CEEEEECTTSCCCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC----------CCSCEECCSEEEEEECS--C
T ss_pred             CeEEEEeCCCCceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCC---CCCcCCCCCcCCcceEEEEEe--C
Confidence            68888887766 9999999999999 9999999999999999999987  432   1345   89999999999999  6


Q ss_pred             CCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--ccCCCCCcceeEEEecCCceEECCCCCCccc
Q 017426           91 EVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPADLCFKLPDNVSLEE  168 (372)
Q Consensus        91 ~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~  168 (372)
                      + ++|++        ||||++.+..+|+.|++|..++.++|++...+  +....+|+|+||+.++++.++++|++++ ++
T Consensus        76 ~-~~~~~--------GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~  145 (366)
T 2cdc_A           76 Y-HGFSQ--------GDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DI  145 (366)
T ss_dssp             C-SSCCT--------TCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TT
T ss_pred             C-CCCCC--------CCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hh
Confidence            7 88999        99999999999999999999999999987765  4322579999999999999999999999 88


Q ss_pred             ccccchhHHHHHHHH-----hcCCC--C-------CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh---hHHHHHH
Q 017426          169 GAMCEPLSVGVHACR-----RANIG--P-------ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD---YRLSVAK  231 (372)
Q Consensus       169 aa~~~~~~~a~~~l~-----~~~~~--~-------g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~---~~~~~~~  231 (372)
                      |++..+++|||++++     .++++  +       |++|||+|+|++|++++|+++.+|+ .|+++++++   ++.++++
T Consensus       146 Aal~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~  224 (366)
T 2cdc_A          146 GILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIE  224 (366)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHH
T ss_pred             hhhcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHH
Confidence            876668899999997     78888  8       9999999999999999999999999 789998988   8999999


Q ss_pred             HhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHH-HHHHHHhccCCEEEEEcCCCCC-ccccchh---h
Q 017426          232 EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTM-STALGATCAGGKVCLVGMGHHE-MTVPLTP---A  306 (372)
Q Consensus       232 ~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~---~  306 (372)
                      ++|++.+ + .+   ++.+.+++ .  . +++|++||++|++..+ +.+++.|+++|+++.++..... ..++...   +
T Consensus       225 ~~ga~~v-~-~~---~~~~~~~~-~--~-~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~  295 (366)
T 2cdc_A          225 ETKTNYY-N-SS---NGYDKLKD-S--V-GKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEI  295 (366)
T ss_dssp             HHTCEEE-E-CT---TCSHHHHH-H--H-CCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHHHH
T ss_pred             HhCCcee-c-hH---HHHHHHHH-h--C-CCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhHHH
Confidence            9999877 5 32   55556655 3  2 6899999999987677 8999999999999999875543 4455555   7


Q ss_pred             hccCcEEEeeccC-CCcHHHHHHHHHcCCCC----CCCceEEEecCChHHHHHHHHH--HhcCCCceEEEEeC
Q 017426          307 AVREVDVVGVFRY-KNTWPLCLELLRSGKID----VKPLVTHRFGFSQKEVEEAFET--SARGGTAIKVMFNL  372 (372)
Q Consensus       307 ~~~~~~i~~~~~~-~~~~~~~~~ll~~g~~~----~~~~~~~~~~~~~~~~~~A~~~--~~~~~~~gkvvv~~  372 (372)
                      ..+++++.++..+ .++++++++++++|.+.    +.+.++++|++  +++++|++.  +. +...+|+|+++
T Consensus       296 ~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l--~~~~~A~~~l~~~-~~~~gKvvi~~  365 (366)
T 2cdc_A          296 VHTNKTIIGLVNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSI--NDEKELLKVLREK-EHGEIKIRILW  365 (366)
T ss_dssp             HHTTCEEEECCCCCHHHHHHHHHHHHHHHHHSHHHHTTSEEEEEET--TCHHHHHHHHHCC-CTTCCEEEEEC
T ss_pred             HhcCcEEEEecCCCHHHHHHHHHHHHcCCCCcccchhhcEEEEEcH--HHHHHHHHHHhhh-cCCceEEEEec
Confidence            8899999998765 56789999999999964    47889999999  999999998  55 55789999975

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=1.1e-48  Score=363.78  Aligned_cols=314  Identities=24%  Similarity=0.328  Sum_probs=261.8

Q ss_pred             CccccccchhcceeEEEec---CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeE
Q 017426            7 SQGEKEDGEEVNMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAG   83 (372)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G   83 (372)
                      ++.+..+++.+||++++..   ++.+++.++|.|+|+++||+|||+++|+|++|++++.|.+.  ....+|.++|||++|
T Consensus        11 ~~~~~~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~v~G~E~~G   88 (342)
T 4eye_A           11 TLEAQTQGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQ--LKMEPPFVPGIETAG   88 (342)
T ss_dssp             -------CCCEEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSS--SCCCSSBCCCSEEEE
T ss_pred             CCcccccCCcceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC--CCCCCCCccceeEEE
Confidence            3345566788899999985   56699999999999999999999999999999999988643  124679999999999


Q ss_pred             EEEEecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCC
Q 017426           84 VIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN  163 (372)
Q Consensus        84 ~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~  163 (372)
                      +|+++|++++ |++        ||||++.                            ..+|+|+||+.++++.++++|++
T Consensus        89 ~V~~vG~~v~-~~v--------GDrV~~~----------------------------~~~G~~aey~~v~~~~~~~iP~~  131 (342)
T 4eye_A           89 VVRSAPEGSG-IKP--------GDRVMAF----------------------------NFIGGYAERVAVAPSNILPTPPQ  131 (342)
T ss_dssp             EEEECCTTSS-CCT--------TCEEEEE----------------------------CSSCCSBSEEEECGGGEEECCTT
T ss_pred             EEEEECCCCC-CCC--------CCEEEEe----------------------------cCCCcceEEEEEcHHHeEECCCC
Confidence            9999999999 999        8888763                            23699999999999999999999


Q ss_pred             CCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEe
Q 017426          164 VSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  240 (372)
Q Consensus       164 ~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~  240 (372)
                      +++++|+.++ +++|||+++ +.+++++|++|||+|+ |++|++++|+++.+|+ .|+++++++++.++++++|++.+++
T Consensus       132 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~v~~  210 (342)
T 4eye_A          132 LDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIVLP  210 (342)
T ss_dssp             SCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEec
Confidence            9999997655 888999999 5689999999999998 9999999999999999 6899999999999999999999887


Q ss_pred             cCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-ccccchhhhccCcEEEeeccC
Q 017426          241 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY  319 (372)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~  319 (372)
                      ++   +++.+.+++.+  .+.++|++|||+|++ .+..++++|+++|+++.+|..... ..++...+..+++++.++...
T Consensus       211 ~~---~~~~~~v~~~~--~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~  284 (342)
T 4eye_A          211 LE---EGWAKAVREAT--GGAGVDMVVDPIGGP-AFDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWG  284 (342)
T ss_dssp             SS---TTHHHHHHHHT--TTSCEEEEEESCC---CHHHHHHTEEEEEEEEEC----------CCCCGGGTTCEEEECCHH
T ss_pred             Cc---hhHHHHHHHHh--CCCCceEEEECCchh-HHHHHHHhhcCCCEEEEEEccCCCCCccCHHHHhhcCCEEEEEehh
Confidence            54   57777777664  345899999999985 889999999999999999865432 345566678899999998642


Q ss_pred             ----------CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          320 ----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       320 ----------~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                                .+.++++++++++| +  .+.++++|++  +++++|++.+.++...||+|++
T Consensus       285 ~~~~~~~~~~~~~~~~~~~l~~~g-l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~  341 (342)
T 4eye_A          285 EFLRTHADYLYETQAGLEKLVAEG-M--RPPVSARIPL--SEGRQALQDFADGKVYGKMVLV  341 (342)
T ss_dssp             HHHHHCTTHHHHHHHHHHHHHHTT-C--CCCEEEEEEG--GGHHHHHHHHHTTCCCSEEEEE
T ss_pred             hhhhcCHHHHHHHHHHHHHHHHcC-C--CCCcceEEeH--HHHHHHHHHHHhCCCCceEEEe
Confidence                      24588999999999 6  7889999999  9999999999999999999986

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=5e-48  Score=358.46  Aligned_cols=309  Identities=23%  Similarity=0.309  Sum_probs=265.6

Q ss_pred             cchhcceeEEEecCC---ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEec
Q 017426           13 DGEEVNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG   89 (372)
Q Consensus        13 ~~~~~~~~~~~~~~~---~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   89 (372)
                      +++.+||++++.+++   .+++.++|.|+|+++||+|||.++|+|++|+++..|.+.    ..+|.++|||++|+|+++|
T Consensus         4 ~~p~~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~----~~~P~i~G~e~~G~V~~vG   79 (334)
T 3qwb_A            4 TIPEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP----CEKPYVLGREASGTVVAKG   79 (334)
T ss_dssp             -CCSEEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC----CCSSEECCSEEEEEEEEEC
T ss_pred             CCchheEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC----CCCCCccccceEEEEEEEC
Confidence            366779999998654   499999999999999999999999999999999887543    3579999999999999999


Q ss_pred             CCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEec-CCceEECCCCCCccc
Q 017426           90 SEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP-ADLCFKLPDNVSLEE  168 (372)
Q Consensus        90 ~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~-~~~~~~~P~~~~~~~  168 (372)
                      ++|++|++        ||||++.                             .+|+|+||+.++ ++.++++|+++++++
T Consensus        80 ~~v~~~~~--------GdrV~~~-----------------------------~~G~~aey~~v~~~~~~~~~P~~~~~~~  122 (334)
T 3qwb_A           80 KGVTNFEV--------GDQVAYI-----------------------------SNSTFAQYSKISSQGPVMKLPKGTSDEE  122 (334)
T ss_dssp             TTCCSCCT--------TCEEEEE-----------------------------CSSCSBSEEEEETTSSEEECCTTCCHHH
T ss_pred             CCCCCCCC--------CCEEEEe-----------------------------eCCcceEEEEecCcceEEECCCCCCHHH
Confidence            99999999        8888752                             259999999999 999999999999999


Q ss_pred             ---ccccc-hhHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecC
Q 017426          169 ---GAMCE-PLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  242 (372)
Q Consensus       169 ---aa~~~-~~~~a~~~l~~-~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~  242 (372)
                         |+.++ ...+||+++.. +++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.++++++|++.++++.
T Consensus       123 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~  201 (334)
T 3qwb_A          123 LKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYGAEYLINAS  201 (334)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETT
T ss_pred             hhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEEeCC
Confidence               66554 67789999865 78999999999995 9999999999999999 689999999999999999999988764


Q ss_pred             CCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-ccccchhhhccCcEEEeeccC--
Q 017426          243 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY--  319 (372)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~--  319 (372)
                      .  +++.+.+++++  .+.++|++||++|+ ..++.++++|+++|+++.+|..... ..++...+..+++++.++...  
T Consensus       202 ~--~~~~~~~~~~~--~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (334)
T 3qwb_A          202 K--EDILRQVLKFT--NGKGVDASFDSVGK-DTFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGY  276 (334)
T ss_dssp             T--SCHHHHHHHHT--TTSCEEEEEECCGG-GGHHHHHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGG
T ss_pred             C--chHHHHHHHHh--CCCCceEEEECCCh-HHHHHHHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccc
Confidence            4  67777777664  35689999999998 5889999999999999999865443 356667778889999875432  


Q ss_pred             -------CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          320 -------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       320 -------~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                             .+.++++++++++|++  ++.++++|++  +++++|++.+.+++..||+|+++
T Consensus       277 ~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  332 (334)
T 3qwb_A          277 IADPEEWKYYSDEFFGLVNSKKL--NIKIYKTYPL--RDYRTAAADIESRKTVGKLVLEI  332 (334)
T ss_dssp             SCSHHHHHHHHHHHHHHHHTTSS--CCCEEEEEEG--GGHHHHHHHHHTTCCCBEEEEEC
T ss_pred             cCCHHHHHHHHHHHHHHHHCCCc--cCceeeEEcH--HHHHHHHHHHHhCCCceEEEEec
Confidence                   2235789999999999  5568899999  99999999999999999999975

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=4e-49  Score=367.95  Aligned_cols=318  Identities=19%  Similarity=0.190  Sum_probs=262.1

Q ss_pred             CCCccccccchhcceeEEEe------cCCceeEEEe---------cCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCc
Q 017426            5 GMSQGEKEDGEEVNMAAWLL------GVNTLKIQPF---------ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF   69 (372)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~------~~~~l~~~~~---------~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~   69 (372)
                      |||+   |+++.+||++++.      +++.+++.++         |.|+|+++||+|||+++|+|++|++++.|.+..  
T Consensus         1 gMs~---m~~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--   75 (349)
T 3pi7_A            1 GMSP---MTIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQ--   75 (349)
T ss_dssp             -------CCCCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSS--
T ss_pred             CCCC---CCCchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCC--
Confidence            6776   6678889999999      5678888888         999999999999999999999999999885432  


Q ss_pred             ccCCCcccccceeEEEEEecCCC-ccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCccee
Q 017426           70 VVKEPMVIGHECAGVIEKVGSEV-KTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN  148 (372)
Q Consensus        70 ~~~~p~~~G~e~~G~V~~vG~~v-~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e  148 (372)
                      ...+|.++|||++|+|+++|++| ++|++        ||||++...                         ...+|+|+|
T Consensus        76 ~~~~p~v~G~E~~G~V~~vG~~v~~~~~v--------GdrV~~~~g-------------------------~~~~G~~ae  122 (349)
T 3pi7_A           76 PRVKGRPAGFEGVGTIVAGGDEPYAKSLV--------GKRVAFATG-------------------------LSNWGSWAE  122 (349)
T ss_dssp             CBCTTSBCCSEEEEEEEEECSSHHHHHHT--------TCEEEEECT-------------------------TSSCCSSBS
T ss_pred             CCCCCCCccceEEEEEEEECCCccCCCCC--------CCEEEEecc-------------------------CCCCcccee
Confidence            24679999999999999999999 99999        888876421                         135799999


Q ss_pred             EEEecCCceEECCCCCCcccccccc-hhHHHHHHHHhcCCCCC-CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChh
Q 017426          149 QVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACRRANIGPE-TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY  225 (372)
Q Consensus       149 ~~~v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g-~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~  225 (372)
                      |+.+|++.++++|+++++++||+++ ...|||++++.++ ++| +++||+|+ |++|++++|+|+.+|+ +|++++++++
T Consensus       123 y~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~  200 (349)
T 3pi7_A          123 YAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDE  200 (349)
T ss_dssp             EEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHHHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESCGG
T ss_pred             eEeechHHeEECCCCCCHHHHhhccccHHHHHHHHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            9999999999999999999999765 5667897777766 677 68888865 9999999999999999 7899999999


Q ss_pred             HHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCC-CCccccc-
Q 017426          226 RLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPL-  303 (372)
Q Consensus       226 ~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~-  303 (372)
                      +.++++++|++.+++++.  +++.+.+++++.  +.++|++|||+|++ .+..++++|+++|+++.+|... ....++. 
T Consensus       201 ~~~~~~~~Ga~~~~~~~~--~~~~~~v~~~~~--~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~  275 (349)
T 3pi7_A          201 QIALLKDIGAAHVLNEKA--PDFEATLREVMK--AEQPRIFLDAVTGP-LASAIFNAMPKRARWIIYGRLDPDATVIREP  275 (349)
T ss_dssp             GHHHHHHHTCSEEEETTS--TTHHHHHHHHHH--HHCCCEEEESSCHH-HHHHHHHHSCTTCEEEECCCSCCSCCCCSCT
T ss_pred             HHHHHHHcCCCEEEECCc--HHHHHHHHHHhc--CCCCcEEEECCCCh-hHHHHHhhhcCCCEEEEEeccCCCCCCCCch
Confidence            999999999999988643  678888877753  45899999999986 6688999999999999998543 3345555 


Q ss_pred             hhhhccCcEEEeeccC----------CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          304 TPAAVREVDVVGVFRY----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       304 ~~~~~~~~~i~~~~~~----------~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ..+..+++++.++...          .+.++++++++++|++  ++.++++|++  +++++|++.+.. ...||+|+++
T Consensus       276 ~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~-~~~gKvvl~p  349 (349)
T 3pi7_A          276 GQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRW--STDVTAVVPL--AEAIAWVPAELT-KPNGKVFIRP  349 (349)
T ss_dssp             HHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSC--CC-CCEEEEH--HHHHHHHHHHHT-SSSSCEEEEC
T ss_pred             hhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCc--ccccceEEcH--HHHHHHHHHHhC-CCCceEEEeC
Confidence            6788899999998643          3567888889999999  6778899999  999999995554 4779999874

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=1.8e-48  Score=359.43  Aligned_cols=307  Identities=18%  Similarity=0.211  Sum_probs=255.3

Q ss_pred             hhcceeEEEecCC---ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhc--ccCCcccCCCcccccceeEEEEEec
Q 017426           15 EEVNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTL--RCADFVVKEPMVIGHECAGVIEKVG   89 (372)
Q Consensus        15 ~~~~~~~~~~~~~---~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~--~~~~~~~~~p~~~G~e~~G~V~~vG   89 (372)
                      +++||++++..++   .+++.++|.|+|+++||+|||+++|+|++|++++.|.  ........+|.++|||++|+|+++|
T Consensus         4 m~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG   83 (321)
T 3tqh_A            4 MKEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELG   83 (321)
T ss_dssp             -CEEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEEC
T ss_pred             cccceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeC
Confidence            3568999998643   4999999999999999999999999999999998872  1111224679999999999999999


Q ss_pred             CCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccc
Q 017426           90 SEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEG  169 (372)
Q Consensus        90 ~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~a  169 (372)
                      ++|++|++        ||||++.+..                        ...+|+|+||+.++++.++++|+++++++|
T Consensus        84 ~~v~~~~~--------GdrV~~~~~~------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~a  131 (321)
T 3tqh_A           84 SDVNNVNI--------GDKVMGIAGF------------------------PDHPCCYAEYVCASPDTIIQKLEKLSFLQA  131 (321)
T ss_dssp             TTCCSCCT--------TCEEEEECST------------------------TTCCCCSBSEEEECGGGEEECCTTSCHHHH
T ss_pred             CCCCCCCC--------CCEEEEccCC------------------------CCCCCcceEEEEecHHHhccCCCCCCHHHH
Confidence            99999999        8888874321                        124699999999999999999999999999


Q ss_pred             cccc-hhHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCccc
Q 017426          170 AMCE-PLSVGVHACRRANIGPETNVLIMG-AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD  247 (372)
Q Consensus       170 a~~~-~~~~a~~~l~~~~~~~g~~vlI~G-ag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~  247 (372)
                      ++++ .+.|||++++.+++++|++|||+| +|++|++++|+|+.+|+ .|+++. ++++.++++++|++.++++..  .+
T Consensus       132 a~l~~~~~ta~~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~~lGa~~~i~~~~--~~  207 (321)
T 3tqh_A          132 ASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLKALGAEQCINYHE--ED  207 (321)
T ss_dssp             HHSHHHHHHHHHHHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHHHHTCSEEEETTT--SC
T ss_pred             hhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHHHcCCCEEEeCCC--cc
Confidence            9887 456999999889999999999997 59999999999999999 577775 566789999999999888654  33


Q ss_pred             -HHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC--CCcHH
Q 017426          248 -IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--KNTWP  324 (372)
Q Consensus       248 -~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~  324 (372)
                       +.+.        -.++|++|||+|++ ....++++|+++|+++.++.....  .....+..+++++.+....  .++++
T Consensus       208 ~~~~~--------~~g~D~v~d~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (321)
T 3tqh_A          208 FLLAI--------STPVDAVIDLVGGD-VGIQSIDCLKETGCIVSVPTITAG--RVIEVAKQKHRRAFGLLKQFNIEELH  276 (321)
T ss_dssp             HHHHC--------CSCEEEEEESSCHH-HHHHHGGGEEEEEEEEECCSTTHH--HHHHHHHHTTCEEECCCCCCCHHHHH
T ss_pred             hhhhh--------ccCCCEEEECCCcH-HHHHHHHhccCCCEEEEeCCCCch--hhhhhhhhcceEEEEEecCCCHHHHH
Confidence             3322        25899999999986 459999999999999998754322  1223456778888885432  46799


Q ss_pred             HHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          325 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       325 ~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ++++++++|.+  ++.++++|++  +++++|++.+.+++..||+|+++
T Consensus       277 ~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  320 (321)
T 3tqh_A          277 YLGKLVSEDKL--RIEISRIFQL--SEAVTAHELLETGHVRGKLVFKV  320 (321)
T ss_dssp             HHHHHHHTTSS--CCCEEEEECG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHCCCc--ccccccEEcH--HHHHHHHHHHHcCCCCceEEEEe
Confidence            99999999999  5678999999  99999999999999999999975

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=6.1e-48  Score=362.50  Aligned_cols=318  Identities=19%  Similarity=0.237  Sum_probs=259.3

Q ss_pred             cccchhcceeEEEecCCceeEE-EecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEec
Q 017426           11 KEDGEEVNMAAWLLGVNTLKIQ-PFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG   89 (372)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~l~~~-~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   89 (372)
                      +|+++.+||++++.+++.+++. ++|.|.|+++||+|||.++|+|++|++++.+.      ..+|.++|||++|+|+++|
T Consensus         5 tm~~p~~mkA~v~~~~~~l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~------~~~p~v~G~e~~G~V~~vG   78 (371)
T 3gqv_A            5 PFIPPPQQTALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF------ATPWAFLGTDYAGTVVAVG   78 (371)
T ss_dssp             CCCCCSCEEEEEECTTSCEEEEEEECCCCCCTTSEEEEEEEEECCGGGGC-----------CCTTSCCCSEEEEEEEEEC
T ss_pred             CCCCchhceeEEEcCCCceEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC------CCCCccCccccEEEEEEeC
Confidence            4778889999999999999999 99999999999999999999999999988652      3468999999999999999


Q ss_pred             CCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccc
Q 017426           90 SEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEG  169 (372)
Q Consensus        90 ~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~a  169 (372)
                      ++|++|++        ||||++.       |..|..+.             ..+|+|+||+.+|++.++++|+++++++|
T Consensus        79 ~~v~~~~~--------GdrV~~~-------~~~~~~~~-------------~~~G~~aey~~v~~~~~~~~P~~~~~~~a  130 (371)
T 3gqv_A           79 SDVTHIQV--------GDRVYGA-------QNEMCPRT-------------PDQGAFSQYTVTRGRVWAKIPKGLSFEQA  130 (371)
T ss_dssp             TTCCSCCT--------TCEEEEE-------CCTTCTTC-------------TTCCSSBSEEECCTTCEEECCTTCCHHHH
T ss_pred             CCCCCCCC--------CCEEEEe-------ccCCCCCC-------------CCCCcCcCeEEEchhheEECCCCCCHHHH
Confidence            99999999        8888653       44444332             34799999999999999999999999999


Q ss_pred             cccc-hhHHHHHHH-Hh-cCC-----------CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC
Q 017426          170 AMCE-PLSVGVHAC-RR-ANI-----------GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG  234 (372)
Q Consensus       170 a~~~-~~~~a~~~l-~~-~~~-----------~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg  234 (372)
                      ++++ .+.|||+++ +. .++           ++|++|||+|+ |++|++++|+|+.+|+ .|+++. +++|.++++++|
T Consensus       131 a~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~lG  208 (371)
T 3gqv_A          131 AALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAKSRG  208 (371)
T ss_dssp             HTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTT
T ss_pred             hhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHHcC
Confidence            9886 457899998 45 443           89999999998 9999999999999999 577774 789999999999


Q ss_pred             CCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHh-ccCCEEEEEcCCCC------Ccccc---ch
Q 017426          235 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGAT-CAGGKVCLVGMGHH------EMTVP---LT  304 (372)
Q Consensus       235 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~------~~~~~---~~  304 (372)
                      ++.++++..  +++.+.+++++   ++++|++||++|++..+..++++| +++|+++.+|....      .....   ..
T Consensus       209 a~~vi~~~~--~~~~~~v~~~t---~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~  283 (371)
T 3gqv_A          209 AEEVFDYRA--PNLAQTIRTYT---KNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGP  283 (371)
T ss_dssp             CSEEEETTS--TTHHHHHHHHT---TTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGG
T ss_pred             CcEEEECCC--chHHHHHHHHc---cCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeee
Confidence            999988654  67888887764   456999999999988899999999 58999999985332      11111   12


Q ss_pred             hhhccCcEEEeeccC----------CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCce-EEEEe
Q 017426          305 PAAVREVDVVGVFRY----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAI-KVMFN  371 (372)
Q Consensus       305 ~~~~~~~~i~~~~~~----------~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~g-kvvv~  371 (372)
                      .+..+++++.++...          .+.++++++++++|++.+.+.+++.|++  +++++|++.+.+++..| |+|++
T Consensus       284 ~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l--~~~~~A~~~l~~g~~~Gkkvvv~  359 (371)
T 3gqv_A          284 TIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGF--DHIKQGMELVRKGELSGEKLVVR  359 (371)
T ss_dssp             GGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECH--HHHHHHHHHHHTTCCSSCEEEEE
T ss_pred             eeccccccccccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcH--HHHHHHHHHHHcCCCceEEEEEE
Confidence            355677777766432          1234588899999999888777777888  99999999999998777 45543

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=8.5e-48  Score=360.35  Aligned_cols=319  Identities=18%  Similarity=0.220  Sum_probs=263.1

Q ss_pred             CCccccccchhcceeEEEe------cCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCccccc
Q 017426            6 MSQGEKEDGEEVNMAAWLL------GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH   79 (372)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~------~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~   79 (372)
                      -.+.++...+++||++++.      ++..+++.++|.|.|+++||+|||.++|+|++|++++.|....   ..+|.++||
T Consensus        11 ~~~~~~~~~m~~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~   87 (363)
T 4dvj_A           11 VDLGTENLYFQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPD---GTDWKVIGY   87 (363)
T ss_dssp             --------CCCEEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC-----CCSBCCCC
T ss_pred             ccccchhhhhheeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCC---CCCCCcccc
Confidence            3444445556789999985      3578999999999999999999999999999999999986432   467999999


Q ss_pred             ceeEEEEEecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEE
Q 017426           80 ECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFK  159 (372)
Q Consensus        80 e~~G~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~  159 (372)
                      |++|+|+++|++|++|++        ||||++...                         ....|+|+||+.+|++.+++
T Consensus        88 E~~G~V~~vG~~v~~~~v--------GdrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~  134 (363)
T 4dvj_A           88 DAAGIVSAVGPDVTLFRP--------GDEVFYAGS-------------------------IIRPGTNAEFHLVDERIVGR  134 (363)
T ss_dssp             CEEEEEEEECTTCCSCCT--------TCEEEECCC-------------------------TTSCCSCBSEEEEEGGGCEE
T ss_pred             eeEEEEEEeCCCCCCCCC--------CCEEEEccC-------------------------CCCCccceEEEEeCHHHeeE
Confidence            999999999999999999        888875211                         12469999999999999999


Q ss_pred             CCCCCCcccccccc-hhHHHHHHH-HhcCCC-----CCCEEEEECC-CHHHHHHHHHHHHc-CCCeEEEEecChhHHHHH
Q 017426          160 LPDNVSLEEGAMCE-PLSVGVHAC-RRANIG-----PETNVLIMGA-GPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVA  230 (372)
Q Consensus       160 ~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~-----~g~~vlI~Ga-g~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~~~  230 (372)
                      +|+++++++||+++ .+.|||+++ +.++++     +|++|||+|+ |++|++++|+|+.+ |+ .|+++++++++.+++
T Consensus       135 iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~-~Vi~~~~~~~~~~~~  213 (363)
T 4dvj_A          135 KPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDL-TVIATASRPETQEWV  213 (363)
T ss_dssp             CCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCS-EEEEECSSHHHHHHH
T ss_pred             CCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHH
Confidence            99999999999887 456899998 458888     8999999985 99999999999985 66 799999999999999


Q ss_pred             HHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccC
Q 017426          231 KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVRE  310 (372)
Q Consensus       231 ~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  310 (372)
                      +++|++.++++.   +++.+.++++   .++++|++|||+|++..++.++++|+++|+++.++..   ..++...+..++
T Consensus       214 ~~lGad~vi~~~---~~~~~~v~~~---~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~~~~~~k~  284 (363)
T 4dvj_A          214 KSLGAHHVIDHS---KPLAAEVAAL---GLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDP---SAFDIMLFKRKA  284 (363)
T ss_dssp             HHTTCSEEECTT---SCHHHHHHTT---CSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEECSCC---SSCCGGGGTTTT
T ss_pred             HHcCCCEEEeCC---CCHHHHHHHh---cCCCceEEEECCCchhhHHHHHHHhcCCCEEEEECCC---CccchHHHhhcc
Confidence            999999998764   3566666654   3678999999999877899999999999999998532   345566777888


Q ss_pred             cEEEeeccC-------------CCcHHHHHHHHHcCCCCCCCceEEEe-cCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          311 VDVVGVFRY-------------KNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       311 ~~i~~~~~~-------------~~~~~~~~~ll~~g~~~~~~~~~~~~-~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +++.++..+             .+.++++++++++|++  ++.++++| .++++++++|++.+.+++..||+|+++
T Consensus       285 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~  358 (363)
T 4dvj_A          285 VSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRL--RTTLTNRLSPINAANLKQAHALVESGTARGKVVIEG  358 (363)
T ss_dssp             CEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSS--CCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEEC
T ss_pred             ceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCe--eccccceecCCCHHHHHHHHHHHHhCCCceEEEEeC
Confidence            998886543             1357899999999999  67777777 334499999999999999999999975

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=3.3e-47  Score=354.49  Aligned_cols=306  Identities=19%  Similarity=0.225  Sum_probs=261.9

Q ss_pred             hcceeEEEec------CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEec
Q 017426           16 EVNMAAWLLG------VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG   89 (372)
Q Consensus        16 ~~~~~~~~~~------~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   89 (372)
                      ++||++++..      ++.+++.++|.|+|+++||+|||.++|+|++|++.+.|.     ...+|.++|||++|+|+++|
T Consensus         1 m~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~-----~~~~p~i~G~e~~G~V~~vG   75 (346)
T 3fbg_A            1 MSLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD-----VSKAPRVLGFDAIGVVESVG   75 (346)
T ss_dssp             -CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC-----CSSSCBCCCCCEEEEEEEEC
T ss_pred             CCcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC-----CCCCCcCcCCccEEEEEEeC
Confidence            4689999884      468999999999999999999999999999999988874     24679999999999999999


Q ss_pred             CCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccc
Q 017426           90 SEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEG  169 (372)
Q Consensus        90 ~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~a  169 (372)
                      ++|++|++        ||||++...                         ...+|+|+||+.+|++.++++|+++++++|
T Consensus        76 ~~v~~~~~--------GdrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~a  122 (346)
T 3fbg_A           76 NEVTMFNQ--------GDIVYYSGS-------------------------PDQNGSNAEYQLINERLVAKAPKNISAEQA  122 (346)
T ss_dssp             TTCCSCCT--------TCEEEECCC-------------------------TTSCCSSBSEEEEEGGGEEECCSSSCHHHH
T ss_pred             CCCCcCCC--------CCEEEEcCC-------------------------CCCCcceeEEEEEChHHeEECCCCCCHHHh
Confidence            99999999        888875211                         124699999999999999999999999999


Q ss_pred             cccc-hhHHHHHHHH-hcCCC------CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEe
Q 017426          170 AMCE-PLSVGVHACR-RANIG------PETNVLIMG-AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  240 (372)
Q Consensus       170 a~~~-~~~~a~~~l~-~~~~~------~g~~vlI~G-ag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~  240 (372)
                      ++++ .+.|||+++. .++++      +|++|||+| +|++|++++|+|+.+|+ +|+++++++++.++++++|++.+++
T Consensus       123 a~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~  201 (346)
T 3fbg_A          123 VSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGADIVLN  201 (346)
T ss_dssp             TTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHHTCSEEEC
T ss_pred             hhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEE
Confidence            9887 4568999985 58888      999999996 59999999999999999 7999999999999999999999887


Q ss_pred             cCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-
Q 017426          241 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-  319 (372)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-  319 (372)
                      ++   +++.+.+++.   .+.++|++|||+|++..++.++++|+++|+++.++..  ...++...+..+++++.+...+ 
T Consensus       202 ~~---~~~~~~~~~~---~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  273 (346)
T 3fbg_A          202 HK---ESLLNQFKTQ---GIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAF--ENDQDLNALKPKSLSFSHEFMFA  273 (346)
T ss_dssp             TT---SCHHHHHHHH---TCCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSCC--SSCBCGGGGTTTTCEEEECCTTH
T ss_pred             CC---ccHHHHHHHh---CCCCccEEEECCCchHHHHHHHHHhccCCEEEEECCC--CCCCccccccccceEEEEEEEec
Confidence            64   3677777665   3678999999999887789999999999999988643  2345566677788998886543 


Q ss_pred             ------------CCcHHHHHHHHHcCCCCCCCceEEEe---cCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          320 ------------KNTWPLCLELLRSGKIDVKPLVTHRF---GFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       320 ------------~~~~~~~~~ll~~g~~~~~~~~~~~~---~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                                  .+.++++++++++|.+  ++.++++|   ++  +++++|++.+.+++..||+|+++
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~~~~l--~~~~~A~~~~~~g~~~GKvvl~~  337 (346)
T 3fbg_A          274 RPLNQTDDMIKHHEYLEDITNKVEQNIY--QPTTTKVIEGLTT--ENIYQAHQILESNTMIGKLVINL  337 (346)
T ss_dssp             HHHTTCTTTHHHHHHHHHHHHHHHTTSS--CCCEEEEEESCCH--HHHHHHHHHHHTTCCCSEEEEEC
T ss_pred             ccccchhhHHHHHHHHHHHHHHHHCCCE--ECCccceecCCCH--HHHHHHHHHHhcCCcceEEEEec
Confidence                        1357889999999998  67788887   66  99999999999999999999974

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=3.3e-47  Score=353.90  Aligned_cols=309  Identities=22%  Similarity=0.299  Sum_probs=261.4

Q ss_pred             hhcceeEEEecCCc-eeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCc
Q 017426           15 EEVNMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (372)
Q Consensus        15 ~~~~~~~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (372)
                      +.+||++++.+++. +++.++|.|.|+++||+|||.++|+|++|++++.|.... ....+|.++|||++|+|+++|++|+
T Consensus         5 ~~~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~P~v~G~E~~G~V~~vG~~v~   83 (343)
T 3gaz_A            5 TPTMIAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPH-AQQPLPAILGMDLAGTVVAVGPEVD   83 (343)
T ss_dssp             -CEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGG-GCCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             chhheEEEEecCCCceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCC-CCCCCCcccCcceEEEEEEECCCCC
Confidence            46799999997764 999999999999999999999999999999999875321 1246799999999999999999999


Q ss_pred             cccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc
Q 017426           94 TLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE  173 (372)
Q Consensus        94 ~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~  173 (372)
                      +|++        ||||++...           +.            ...+|+|+||+.+|++.++++|+++++++|++++
T Consensus        84 ~~~v--------GdrV~~~~~-----------g~------------~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~  132 (343)
T 3gaz_A           84 SFRV--------GDAVFGLTG-----------GV------------GGLQGTHAQFAAVDARLLASKPAALTMRQASVLP  132 (343)
T ss_dssp             SCCT--------TCEEEEECC-----------SS------------TTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSH
T ss_pred             CCCC--------CCEEEEEeC-----------CC------------CCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhh
Confidence            9999        888876211           11            1246999999999999999999999999999887


Q ss_pred             -hhHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHH
Q 017426          174 -PLSVGVHAC-RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE  250 (372)
Q Consensus       174 -~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~  250 (372)
                       .+.|||+++ +.+++++|++|||+|+ |++|++++|+|+..|+ +|+++ .++++.++++++|++. ++   ..+++.+
T Consensus       133 ~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa~~-i~---~~~~~~~  206 (343)
T 3gaz_A          133 LVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGATP-ID---ASREPED  206 (343)
T ss_dssp             HHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTSEE-EE---TTSCHHH
T ss_pred             hhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCCCE-ec---cCCCHHH
Confidence             567899999 6799999999999995 9999999999999999 68888 8899999999999987 55   3467777


Q ss_pred             HHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-----------
Q 017426          251 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-----------  319 (372)
Q Consensus       251 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-----------  319 (372)
                      .+++.+  .+.++|++||++|+ ..+..++++|+++|+++.++...   ..+...+..+++++.++...           
T Consensus       207 ~~~~~~--~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  280 (343)
T 3gaz_A          207 YAAEHT--AGQGFDLVYDTLGG-PVLDASFSAVKRFGHVVSCLGWG---THKLAPLSFKQATYSGVFTLHTLLANEGLAH  280 (343)
T ss_dssp             HHHHHH--TTSCEEEEEESSCT-HHHHHHHHHEEEEEEEEESCCCS---CCCCHHHHHTTCEEEECCTTHHHHHTCSHHH
T ss_pred             HHHHHh--cCCCceEEEECCCc-HHHHHHHHHHhcCCeEEEEcccC---ccccchhhhcCcEEEEEEeccchhcccchHH
Confidence            777664  35689999999997 58899999999999999987544   34556677899999987642           


Q ss_pred             -CCcHHHHHHHHHcCCCCCCCceE-EEecCChHHHHHHHHHHhcCCC----ceEEEEe
Q 017426          320 -KNTWPLCLELLRSGKIDVKPLVT-HRFGFSQKEVEEAFETSARGGT----AIKVMFN  371 (372)
Q Consensus       320 -~~~~~~~~~ll~~g~~~~~~~~~-~~~~~~~~~~~~A~~~~~~~~~----~gkvvv~  371 (372)
                       .+.++++++++++|.+  ++.++ ++|++  +++++|++.+.+++.    .||++++
T Consensus       281 ~~~~~~~~~~l~~~g~l--~~~i~~~~~~l--~~~~~A~~~~~~~~~~Gr~~GK~v~~  334 (343)
T 3gaz_A          281 FGEMLREADALVQTGKL--APRLDPRTFSI--AEIGSAYDAVLGRNDVPRQRGKIAIT  334 (343)
T ss_dssp             HHHHHHHHHHHHHTTCC--CCCBCSCCEET--TCHHHHHHHHHTCTTCCCCSSBCEEE
T ss_pred             HHHHHHHHHHHHHCCCc--ccCccCcEecH--HHHHHHHHHHHcCCCcccccceEEEE
Confidence             2568899999999999  56777 78999  999999999988855    6788876

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=9.6e-47  Score=350.58  Aligned_cols=310  Identities=18%  Similarity=0.212  Sum_probs=256.8

Q ss_pred             hhcceeEEEecCCc----eeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecC
Q 017426           15 EEVNMAAWLLGVNT----LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (372)
Q Consensus        15 ~~~~~~~~~~~~~~----l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (372)
                      +++||++++...+.    +++.++|.|+|+++||+|||+++|+|++|++++.|.+..  ...+|.++|||++|+|+++|+
T Consensus         2 ~~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~i~G~E~~G~V~~vG~   79 (340)
T 3gms_A            2 SLHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAH--RIPLPNIPGYEGVGIVENVGA   79 (340)
T ss_dssp             CCEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTT--TSCSSBCCCSCCEEEEEEECT
T ss_pred             CcccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCC--CCCCCCcCCcceEEEEEEeCC
Confidence            35789999986643    899999999999999999999999999999999886432  246799999999999999999


Q ss_pred             CCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccccc
Q 017426           91 EVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA  170 (372)
Q Consensus        91 ~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa  170 (372)
                      +|++|++        ||||++.                            ..+|+|+||+.+|++.++++|+++++++|+
T Consensus        80 ~v~~~~v--------GdrV~~~----------------------------~~~G~~aey~~v~~~~~~~vP~~l~~~~aa  123 (340)
T 3gms_A           80 FVSRELI--------GKRVLPL----------------------------RGEGTWQEYVKTSADFVVPIPDSIDDFTAA  123 (340)
T ss_dssp             TSCGGGT--------TCEEEEC----------------------------SSSCSSBSEEEEEGGGEEECCTTSCHHHHT
T ss_pred             CCCCCCC--------CCEEEec----------------------------CCCccceeEEEcCHHHeEECCCCCCHHHHh
Confidence            9999999        8888752                            246999999999999999999999999999


Q ss_pred             ccc-hhHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCccc
Q 017426          171 MCE-PLSVGVHAC-RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD  247 (372)
Q Consensus       171 ~~~-~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~  247 (372)
                      +++ ...+||+++ +.+++++|++|||+|+ |++|++++|+|+..|+ .|+++++++++.++++++|++.++++..  .+
T Consensus       124 ~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~~~~~~~~--~~  200 (340)
T 3gms_A          124 QMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAYVIDTST--AP  200 (340)
T ss_dssp             TSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEETTT--SC
T ss_pred             hhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCCcEEEeCCc--cc
Confidence            775 677889888 5689999999999998 6999999999999999 6889999999999999999999887643  67


Q ss_pred             HHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhh-ccCcEEEeecc--------
Q 017426          248 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA-VREVDVVGVFR--------  318 (372)
Q Consensus       248 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~i~~~~~--------  318 (372)
                      +.+.+++++  .+.++|++|||+|++ .....+++|+++|+++.+|..... .++...+. ...+.+.....        
T Consensus       201 ~~~~~~~~~--~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (340)
T 3gms_A          201 LYETVMELT--NGIGADAAIDSIGGP-DGNELAFSLRPNGHFLTIGLLSGI-QVNWAEIVTKAKVHANIFHLRHWNDEVS  276 (340)
T ss_dssp             HHHHHHHHT--TTSCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTSC-CCCHHHHHHTSCCEEEECCHHHHHHHSC
T ss_pred             HHHHHHHHh--CCCCCcEEEECCCCh-hHHHHHHHhcCCCEEEEEeecCCC-CCCHHHhhhcccceEEEEEehhhhhhcC
Confidence            777777764  356899999999986 556677999999999999865432 22222222 23444444321        


Q ss_pred             ---CCCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCC-ceEEEEeC
Q 017426          319 ---YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMFNL  372 (372)
Q Consensus       319 ---~~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~-~gkvvv~~  372 (372)
                         ..+.++++++++++|++.+.+ ++++|++  +++++|++.+.+++. .||+++++
T Consensus       277 ~~~~~~~~~~~~~l~~~g~l~~~~-i~~~~~l--~~~~~A~~~~~~~~~~~GKvvl~~  331 (340)
T 3gms_A          277 PYKWQETFRHLIRLVENEQLRFMK-VHSTYEL--ADVKAAVDVVQSAEKTKGKVFLTS  331 (340)
T ss_dssp             HHHHHHHHHHHHHHHHTTSSCCCC-EEEEEEG--GGHHHHHHHHHCTTCCSSEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHcCCCcccc-ccEEEeH--HHHHHHHHHHHhcCCCCCeEEEEE
Confidence               145788999999999996544 7899999  999999999999874 49999874

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=4.1e-48  Score=356.17  Aligned_cols=298  Identities=23%  Similarity=0.313  Sum_probs=239.9

Q ss_pred             hcceeEEEe-cCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           16 EVNMAAWLL-GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        16 ~~~~~~~~~-~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      .+||++++. +++.+++.++|.|+|+++||+|||.++|+|++|++++.|.+..   ..+|.++|||++|+|+++|++|++
T Consensus         3 ~tMka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~   79 (315)
T 3goh_A            3 EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPIN---WSNGHVPGVDGAGVIVKVGAKVDS   79 (315)
T ss_dssp             CEEEEEEEETTTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTC---CCTTCCCCSEEEEEEEEECTTSCG
T ss_pred             cceEEEEEeCCCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCc---CCCCCEeeeeeEEEEEEeCCCCCC
Confidence            358999999 7899999999999999999999999999999999999986532   467999999999999999999999


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-  173 (372)
                      |++        ||||++.+.                         ...+|+|+||+.+|++.++++|+++++++||+++ 
T Consensus        80 ~~v--------GdrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  126 (315)
T 3goh_A           80 KML--------GRRVAYHTS-------------------------LKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPC  126 (315)
T ss_dssp             GGT--------TCEEEEECC-------------------------TTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHH
T ss_pred             CCC--------CCEEEEeCC-------------------------CCCCcccccEEEEcHHHhccCcCCCCHHHHhhCcc
Confidence            999        888886432                         1246999999999999999999999999998665 


Q ss_pred             hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHH
Q 017426          174 PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE  253 (372)
Q Consensus       174 ~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~  253 (372)
                      +++|||++++.+++++|++|||+|+|++|++++|+|+.+|+ +|++++ ++++.++++++|++.+++      + .+.+ 
T Consensus       127 ~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~------d-~~~v-  196 (315)
T 3goh_A          127 PLLTAWQAFEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLYR------E-PSQV-  196 (315)
T ss_dssp             HHHHHHHHHTTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEES------S-GGGC-
T ss_pred             HHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEEc------C-HHHh-
Confidence            88999999977999999999999999999999999999999 788888 899999999999988772      1 1111 


Q ss_pred             HHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccc--cchhhhccCcEEEeeccC---------CCc
Q 017426          254 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTV--PLTPAAVREVDVVGVFRY---------KNT  322 (372)
Q Consensus       254 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~--~~~~~~~~~~~i~~~~~~---------~~~  322 (372)
                            +.++|++|||+|++ .+..++++|+++|+++.++........  ....+..+.+++.++..+         .+.
T Consensus       197 ------~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (315)
T 3goh_A          197 ------TQKYFAIFDAVNSQ-NAAALVPSLKANGHIICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQ  269 (315)
T ss_dssp             ------CSCEEEEECC--------TTGGGEEEEEEEEEECCC----------CCSEEEEECGGGHHHHCCHHHHHHHHHH
T ss_pred             ------CCCccEEEECCCch-hHHHHHHHhcCCCEEEEEeCCCCccccchhhhcceeeEEEeecccccCChhHHHHHHHH
Confidence                  57999999999986 558899999999999999754322111  112223333333333221         124


Q ss_pred             HHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          323 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       323 ~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ++++++++++|++  ++.++++|++  +++++|++.+.  ...||+|+++
T Consensus       270 ~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~--~~~gKvvi~~  313 (315)
T 3goh_A          270 GEALLTLIAQGKM--EIAAPDIFRF--EQMIEALDHSE--QTKLKTVLTL  313 (315)
T ss_dssp             HHHHHHHHHTTSS--CCCCCEEEEG--GGHHHHHHHHH--HHCCCEEEES
T ss_pred             HHHHHHHHHCCCc--ccccceEecH--HHHHHHHHHHH--hcCCcEEEEe
Confidence            6889999999998  6788899999  99999999988  5778999875

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=6.6e-47  Score=352.84  Aligned_cols=306  Identities=22%  Similarity=0.297  Sum_probs=252.9

Q ss_pred             hcceeEEEecCC---ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCC
Q 017426           16 EVNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (372)
Q Consensus        16 ~~~~~~~~~~~~---~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (372)
                      ++||++++.+++   .+++.+.|.|+|+++||+|||.++|+|++|++.+.|.+..  ...+|.++|||++|+|+++|++|
T Consensus         2 m~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~e~~G~V~~vG~~v   79 (349)
T 4a27_A            2 MEMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDN--PPKTPLVPGFECSGIVEALGDSV   79 (349)
T ss_dssp             CCEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCSEEEEEEEEECTTC
T ss_pred             ceeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCC--CCCCCccccceeEEEEEEeCCCC
Confidence            569999999664   7999999999999999999999999999999999986432  24679999999999999999999


Q ss_pred             ccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccccccc
Q 017426           93 KTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC  172 (372)
Q Consensus        93 ~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~  172 (372)
                      ++|++        ||||++.+                            .+|+|+||+.++++.++++|+++++++|+.+
T Consensus        80 ~~~~~--------GdrV~~~~----------------------------~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l  123 (349)
T 4a27_A           80 KGYEI--------GDRVMAFV----------------------------NYNAWAEVVCTPVEFVYKIPDDMSFSEAAAF  123 (349)
T ss_dssp             CSCCT--------TCEEEEEC----------------------------SSCCSBSEEEEEGGGEEECCTTSCHHHHHTS
T ss_pred             CCCCC--------CCEEEEec----------------------------CCCcceEEEEecHHHeEECCCCCCHHHHHHH
Confidence            99999        88887632                            3599999999999999999999999999988


Q ss_pred             c-hhHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHH
Q 017426          173 E-PLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIA  249 (372)
Q Consensus       173 ~-~~~~a~~~l~-~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~  249 (372)
                      + ++.|||+++. .+++++|++|||+|+ |++|++++|+|+.+|...|+++. ++++.+.++ +|++.+++   ...++.
T Consensus       124 ~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~---~~~~~~  198 (349)
T 4a27_A          124 PMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFD---RNADYV  198 (349)
T ss_dssp             HHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEE---TTSCHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEc---CCccHH
Confidence            7 6789999984 589999999999998 99999999999999765777775 677888888 99999886   346787


Q ss_pred             HHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-----------------ccccchhhhccCcE
Q 017426          250 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-----------------MTVPLTPAAVREVD  312 (372)
Q Consensus       250 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------------~~~~~~~~~~~~~~  312 (372)
                      +.++++.   ++++|++|||+|++ .++.++++|+++|+++.+|.....                 ..++...+..++.+
T Consensus       199 ~~~~~~~---~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  274 (349)
T 4a27_A          199 QEVKRIS---AEGVDIVLDCLCGD-NTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKV  274 (349)
T ss_dssp             HHHHHHC---TTCEEEEEEECC--------CTTEEEEEEEEEEC-------------------------CHHHHHHHTCE
T ss_pred             HHHHHhc---CCCceEEEECCCch-hHHHHHHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCce
Confidence            7777653   57999999999986 568999999999999999864311                 11334456678888


Q ss_pred             EEeeccC------------CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          313 VVGVFRY------------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       313 i~~~~~~------------~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +.++...            .+.++++++++++|++  ++.++++|++  +++++|++.+.+++..||+|+++
T Consensus       275 i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~l~~~~~~GKvvi~~  342 (349)
T 4a27_A          275 IAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKI--KPVVDSLWAL--EEVKEAMQRIHDRGNIGKLILDV  342 (349)
T ss_dssp             EEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSC--CCCEEEEECG--GGHHHHHHHHHTTCCSSEEEEET
T ss_pred             EEEEeehheeccccchHHHHHHHHHHHHHHHCCCc--cccccceECH--HHHHHHHHHHHhCCCCceEEEec
Confidence            8887531            3568899999999999  7889999999  99999999999999999999975

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=2.1e-46  Score=350.03  Aligned_cols=318  Identities=18%  Similarity=0.241  Sum_probs=260.4

Q ss_pred             cccccchhcceeEEEecCC---ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEE
Q 017426            9 GEKEDGEEVNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI   85 (372)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~---~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V   85 (372)
                      +.+.+.+.+||++++..++   .+++.++|.|.|+++||+|||.++|+|++|++...|.+..  ...+|.++|||++|+|
T Consensus        14 ~~~~~~~~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~p~v~G~E~~G~V   91 (354)
T 2j8z_A           14 GTENLYFQSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDP--PPGASNILGLEASGHV   91 (354)
T ss_dssp             -------CEEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC--CTTSCSSSCSEEEEEE
T ss_pred             cccccchhheeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCC--CCCCCcccceeeEEEE
Confidence            4555677889999988654   6899999999999999999999999999999999885432  1356899999999999


Q ss_pred             EEecCCC-ccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCC
Q 017426           86 EKVGSEV-KTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNV  164 (372)
Q Consensus        86 ~~vG~~v-~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~  164 (372)
                      +++|++| ++|++        ||||++.                            ...|+|+||+.+|++.++++|+++
T Consensus        92 ~~vG~~v~~~~~v--------GdrV~~~----------------------------~~~G~~aey~~v~~~~~~~iP~~l  135 (354)
T 2j8z_A           92 AELGPGCQGHWKI--------GDTAMAL----------------------------LPGGGQAQYVTVPEGLLMPIPEGL  135 (354)
T ss_dssp             EEECSCC--CCCT--------TCEEEEE----------------------------CSSCCSBSEEEEEGGGEEECCTTC
T ss_pred             EEECCCcCCCCCC--------CCEEEEe----------------------------cCCCcceeEEEeCHHHcEECCCCC
Confidence            9999999 99999        8888762                            135999999999999999999999


Q ss_pred             Ccccccccc-hhHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEec
Q 017426          165 SLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  241 (372)
Q Consensus       165 ~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~  241 (372)
                      ++++|++++ +++|||+++ +.+++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++++|++.++++
T Consensus       136 s~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~  214 (354)
T 2j8z_A          136 TLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGAAAGFNY  214 (354)
T ss_dssp             CHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred             CHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec
Confidence            999998776 788999999 5689999999999986 9999999999999999 68889999999999999999988876


Q ss_pred             CCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-ccccc-hhhhccCcEEEeeccC
Q 017426          242 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPL-TPAAVREVDVVGVFRY  319 (372)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~-~~~~~~~~~i~~~~~~  319 (372)
                      ..  .++.+.+.+..  .+.++|++||++|++ .+..++++|+++|+++.+|..... ..++. ..+..+++++.++...
T Consensus       215 ~~--~~~~~~~~~~~--~~~~~d~vi~~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~  289 (354)
T 2j8z_A          215 KK--EDFSEATLKFT--KGAGVNLILDCIGGS-YWEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLR  289 (354)
T ss_dssp             TT--SCHHHHHHHHT--TTSCEEEEEESSCGG-GHHHHHHHEEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCST
T ss_pred             CC--hHHHHHHHHHh--cCCCceEEEECCCch-HHHHHHHhccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEEEEcc
Confidence            43  56767666653  245899999999986 788999999999999999865432 34555 6677899999997653


Q ss_pred             CC-----------cHHHHHHHHHcC-CCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          320 KN-----------TWPLCLELLRSG-KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       320 ~~-----------~~~~~~~ll~~g-~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ..           .++++++++++| ++.+.+.++++|++  +++++|++.+.++...+|+|+++
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  352 (354)
T 2j8z_A          290 SRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPV--TEIQEAHKYMEANKNIGKIVLEL  352 (354)
T ss_dssp             TCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEEEEEG--GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             cccccccHHHHHHHHHHHHHHHHcCCCccccCccceEEcH--HHHHHHHHHHHhCCCCceEEEec
Confidence            11           124578888999 33337889999999  99999999999888889999874

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=2.5e-46  Score=345.66  Aligned_cols=306  Identities=27%  Similarity=0.279  Sum_probs=259.1

Q ss_pred             ceeEEEecC---CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        18 ~~~~~~~~~---~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      ||++++..+   +.+++.+.|.|+|+++||+|||.++|+|++|++++.|.+..   ..+|.++|||++|+|+++|++|++
T Consensus         2 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~e~~G~V~~vG~~v~~   78 (325)
T 3jyn_A            2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA---PFLPSGLGAEGAGVVEAVGDEVTR   78 (325)
T ss_dssp             EEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC---SSSSBCCCCCEEEEEEEECTTCCS
T ss_pred             cEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC---CCCCCCCCceeEEEEEEECCCCCC
Confidence            788888743   46999999999999999999999999999999999886532   367999999999999999999999


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-  173 (372)
                      |++        ||||++..                           ..+|+|+||+.+|++.++++|+++++++|++++ 
T Consensus        79 ~~~--------GdrV~~~~---------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~  123 (325)
T 3jyn_A           79 FKV--------GDRVAYGT---------------------------GPLGAYSEVHVLPEANLVKLADSVSFEQAAALML  123 (325)
T ss_dssp             CCT--------TCEEEESS---------------------------SSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHH
T ss_pred             CCC--------CCEEEEec---------------------------CCCccccceEEecHHHeEECCCCCCHHHHhhhhh
Confidence            999        88887521                           246999999999999999999999999999766 


Q ss_pred             hhHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHH
Q 017426          174 PLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE  251 (372)
Q Consensus       174 ~~~~a~~~l~~-~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~  251 (372)
                      ...+||+++.. +++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.++++++|++.++++..  .++.+.
T Consensus       124 ~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~--~~~~~~  200 (325)
T 3jyn_A          124 KGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDYSH--EDVAKR  200 (325)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHH
T ss_pred             hHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC--ccHHHH
Confidence            66789988864 88999999999995 9999999999999999 6889999999999999999999887643  677777


Q ss_pred             HHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-ccccchhhhcc-CcEEEeecc-----CCC---
Q 017426          252 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVR-EVDVVGVFR-----YKN---  321 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~-~~~i~~~~~-----~~~---  321 (372)
                      +++++  .+.++|++||++|+ ..+..++++|+++|+++.+|..... ..++...+..+ .+.+.+...     ..+   
T Consensus       201 ~~~~~--~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (325)
T 3jyn_A          201 VLELT--DGKKCPVVYDGVGQ-DTWLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQ  277 (325)
T ss_dssp             HHHHT--TTCCEEEEEESSCG-GGHHHHHTTEEEEEEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHH
T ss_pred             HHHHh--CCCCceEEEECCCh-HHHHHHHHHhcCCCEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHH
Confidence            77664  35689999999998 5889999999999999999865543 24555666666 566654321     123   


Q ss_pred             -cHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEe
Q 017426          322 -TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  371 (372)
Q Consensus       322 -~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~  371 (372)
                       .++++++++++|++  ++.++++|++  +++++|++.+.+++..||+|+.
T Consensus       278 ~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~Gkvvl~  324 (325)
T 3jyn_A          278 TMADELFDMLASGKL--KVDGIEQYAL--KDAAKAQIELSARRTTGSTILI  324 (325)
T ss_dssp             HHHHHHHHHHHTTSS--CCCCCEEEEG--GGHHHHHHHHHTTCCCSCEEEE
T ss_pred             HHHHHHHHHHHCCCe--eCccccEEcH--HHHHHHHHHHHcCCCCceEEEe
Confidence             34589999999999  4457899999  9999999999999999999986

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.1e-45  Score=344.51  Aligned_cols=310  Identities=23%  Similarity=0.354  Sum_probs=258.8

Q ss_pred             hhcceeEEEecC---CceeE-EEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecC
Q 017426           15 EEVNMAAWLLGV---NTLKI-QPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (372)
Q Consensus        15 ~~~~~~~~~~~~---~~l~~-~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (372)
                      +.+||++++..+   ..+++ .++|.|.|+++||+|||.++|+|++|+++..|.+..  ...+|.++|||++|+|+++|+
T Consensus        27 ~~~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~P~v~G~E~~G~V~~vG~  104 (351)
T 1yb5_A           27 QKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR--KPLLPYTPGSDVAGVIEAVGD  104 (351)
T ss_dssp             -CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC--CCCSSBCCCSCEEEEEEEECT
T ss_pred             cceEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCCcCCceeEEEEEEECC
Confidence            445888888743   46888 799999999999999999999999999998875421  235799999999999999999


Q ss_pred             CCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccccc
Q 017426           91 EVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA  170 (372)
Q Consensus        91 ~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa  170 (372)
                      +|++|++        ||||++.+                           ...|+|+||+.+|++.++++|+++++++||
T Consensus       105 ~v~~~~v--------GdrV~~~~---------------------------~~~G~~aey~~v~~~~~~~~P~~l~~~~aA  149 (351)
T 1yb5_A          105 NASAFKK--------GDRVFTSS---------------------------TISGGYAEYALAADHTVYKLPEKLDFKQGA  149 (351)
T ss_dssp             TCTTCCT--------TCEEEESC---------------------------CSSCSSBSEEEEEGGGEEECCTTSCHHHHT
T ss_pred             CCCCCCC--------CCEEEEeC---------------------------CCCCcceeEEEECHHHeEECCCCCCHHHHH
Confidence            9999999        88887632                           135999999999999999999999999999


Q ss_pred             ccc-hhHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCccc
Q 017426          171 MCE-PLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD  247 (372)
Q Consensus       171 ~~~-~~~~a~~~l~-~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~  247 (372)
                      +++ +++|||+++. .+++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.++++++|++.++++++  ++
T Consensus       150 ~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~--~~  226 (351)
T 1yb5_A          150 AIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFNHRE--VN  226 (351)
T ss_dssp             TTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS--TT
T ss_pred             hhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcCCCEEEeCCC--ch
Confidence            876 8889999996 689999999999998 9999999999999999 6889999999999999999998887643  56


Q ss_pred             HHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC---CCc--
Q 017426          248 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY---KNT--  322 (372)
Q Consensus       248 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~--  322 (372)
                      +.+.+.+..  .+.++|++||++|.+ .+..++++++++|+++.+|... ...++...+..+++++.++...   .+.  
T Consensus       227 ~~~~~~~~~--~~~~~D~vi~~~G~~-~~~~~~~~l~~~G~iv~~g~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  302 (351)
T 1yb5_A          227 YIDKIKKYV--GEKGIDIIIEMLANV-NLSKDLSLLSHGGRVIVVGSRG-TIEINPRDTMAKESSIIGVTLFSSTKEEFQ  302 (351)
T ss_dssp             HHHHHHHHH--CTTCEEEEEESCHHH-HHHHHHHHEEEEEEEEECCCCS-CEEECTHHHHTTTCEEEECCGGGCCHHHHH
T ss_pred             HHHHHHHHc--CCCCcEEEEECCChH-HHHHHHHhccCCCEEEEEecCC-CCccCHHHHHhCCcEEEEEEeecCCHHHHH
Confidence            766676654  345899999999975 7889999999999999998542 2345556677889999997432   223  


Q ss_pred             --HHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHH-HhcCCCceEEEEeC
Q 017426          323 --WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET-SARGGTAIKVMFNL  372 (372)
Q Consensus       323 --~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~-~~~~~~~gkvvv~~  372 (372)
                        ++.+.+++++|.+  .+.++++|++  +++++|++. +.++...||+|+++
T Consensus       303 ~~~~~l~~~~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          303 QYAAALQAGMEIGWL--KPVIGSQYPL--EKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             HHHHHHHHHHHHTCC--CCCEEEEEEG--GGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             HHHHHHHHHHHCCCc--cCccceEEcH--HHHHHHHHHHHHhCCCCeEEEEeC
Confidence              3456667788887  6788999999  999999998 66666789999874

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=1.4e-46  Score=351.63  Aligned_cols=314  Identities=18%  Similarity=0.236  Sum_probs=253.5

Q ss_pred             cchhcceeEEEecCCc----eeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEe
Q 017426           13 DGEEVNMAAWLLGVNT----LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV   88 (372)
Q Consensus        13 ~~~~~~~~~~~~~~~~----l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   88 (372)
                      +++.+||++++.+++.    +++.++|.|.|+++||+|||.++|+|++|++.+.|.+..  ...+|.++|||++|+|+++
T Consensus        22 ~m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~P~v~G~E~~G~V~~v   99 (357)
T 1zsy_A           22 SMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGL--LPELPAVGGNEGVAQVVAV   99 (357)
T ss_dssp             CCCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC--CCCSSEECCSCCEEEEEEE
T ss_pred             hCchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCC--CCCCCccccceEEEEEEEe
Confidence            3556799999987765    889999999999999999999999999999999875421  1246899999999999999


Q ss_pred             cCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccc
Q 017426           89 GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE  168 (372)
Q Consensus        89 G~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~  168 (372)
                      |++|++|++        ||||++.+.                           .+|+|+||+.++++.++++|+++++++
T Consensus       100 G~~v~~~~v--------GdrV~~~~~---------------------------~~G~~aey~~v~~~~~~~iP~~l~~~~  144 (357)
T 1zsy_A          100 GSNVTGLKP--------GDWVIPANA---------------------------GLGTWRTEAVFSEEALIQVPSDIPLQS  144 (357)
T ss_dssp             CTTCCSCCT--------TCEEEESSS---------------------------CSCCSBSEEEEEGGGEEEECSSSCHHH
T ss_pred             CCCCCCCCC--------CCEEEEcCC---------------------------CCccceeEEecCHHHcEECCCCCCHHH
Confidence            999999999        888876321                           259999999999999999999999999


Q ss_pred             ccccc-hhHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh---hHHHHHHHhCCCeEEecC
Q 017426          169 GAMCE-PLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD---YRLSVAKEIGADNIVKVS  242 (372)
Q Consensus       169 aa~~~-~~~~a~~~l~~-~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~---~~~~~~~~lg~~~v~~~~  242 (372)
                      |++++ .+.|||+++.. +++++|++|||+|+ |++|++++|+|+.+|+++++++++++   ++.++++++|++.+++++
T Consensus       145 Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~  224 (357)
T 1zsy_A          145 AATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEE  224 (357)
T ss_dssp             HHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHH
T ss_pred             HhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecC
Confidence            99887 67899999865 89999999999998 99999999999999996555554443   357889999999988753


Q ss_pred             CCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCC-CCccccchhhhccCcEEEeeccC--
Q 017426          243 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY--  319 (372)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~--  319 (372)
                      +   ...+.+.++.. ..+++|+||||+|++ ....++++++++|+++.+|... ....++...+..+++++.++..+  
T Consensus       225 ~---~~~~~~~~~~~-~~~~~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  299 (357)
T 1zsy_A          225 E---LRRPEMKNFFK-DMPQPRLALNCVGGK-SSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQW  299 (357)
T ss_dssp             H---HHSGGGGGTTS-SSCCCSEEEESSCHH-HHHHHHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEECCHHHH
T ss_pred             c---chHHHHHHHHh-CCCCceEEEECCCcH-HHHHHHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEEEEcchh
Confidence            2   11112222221 112599999999986 4567899999999999997533 23445555677899999987542  


Q ss_pred             ---------CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          320 ---------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       320 ---------~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                               .+.++++++++++|++  ++.+.++|++  +++++|++.+.++...+|+|+++
T Consensus       300 ~~~~~~~~~~~~~~~~~~l~~~g~l--~~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          300 KKDHSPDQFKELILTLCDLIRRGQL--TAPACSQVPL--QDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             HHHSCHHHHHHHHHHHHHHHHTTSS--CCCCEEEEEG--GGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             cccCCHHHHHHHHHHHHHHHHcCCC--cCccceEEcH--HHHHHHHHHHHhCCCCCcEEEeC
Confidence                     2357889999999999  4556689999  99999999999888888999975

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=3.6e-46  Score=350.05  Aligned_cols=316  Identities=17%  Similarity=0.215  Sum_probs=256.7

Q ss_pred             hcceeEEEecCCc----eeEEEecCCCCC--CCcEEEEEeeeeeCcccHHhhhhcccCCcccCCC---------cccccc
Q 017426           16 EVNMAAWLLGVNT----LKIQPFELPSLG--PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP---------MVIGHE   80 (372)
Q Consensus        16 ~~~~~~~~~~~~~----l~~~~~~~p~~~--~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p---------~~~G~e   80 (372)
                      ++||++++.+++.    +++.++|.|.|.  ++||+|||.++|+|++|++++.|.+..  ...+|         .++|||
T Consensus         2 ~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~P~~~~~~~p~~i~G~E   79 (364)
T 1gu7_A            2 ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPS--KPAKTTGFGTTEPAAPCGNE   79 (364)
T ss_dssp             EEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSC--CCCCBSTTCCSSCBEECCSC
T ss_pred             ceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCC--CCCCCccccccCcccccCce
Confidence            4689999987764    899999988877  999999999999999999999885432  12345         899999


Q ss_pred             eeEEEEEecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEEC
Q 017426           81 CAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL  160 (372)
Q Consensus        81 ~~G~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~  160 (372)
                      ++|+|+++|++|++|++        ||||++.+                           ..+|+|+||+.+|++.++++
T Consensus        80 ~~G~V~~vG~~v~~~~v--------GdrV~~~~---------------------------~~~G~~aey~~v~~~~~~~~  124 (364)
T 1gu7_A           80 GLFEVIKVGSNVSSLEA--------GDWVIPSH---------------------------VNFGTWRTHALGNDDDFIKL  124 (364)
T ss_dssp             CEEEEEEECTTCCSCCT--------TCEEEESS---------------------------SCCCCSBSEEEEEGGGEEEE
T ss_pred             eEEEEEEeCCCCCcCCC--------CCEEEecC---------------------------CCCCcchheEecCHHHeEEc
Confidence            99999999999999999        88887632                           13599999999999999999


Q ss_pred             CC-----------CCCcccccccc-hhHHHHHHHHh-cCCCCC-CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChh
Q 017426          161 PD-----------NVSLEEGAMCE-PLSVGVHACRR-ANIGPE-TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY  225 (372)
Q Consensus       161 P~-----------~~~~~~aa~~~-~~~~a~~~l~~-~~~~~g-~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~  225 (372)
                      |+           ++++++|++++ ++.|||++++. +++++| ++|||+|+ |++|++++|+|+.+|++ ++++.++++
T Consensus       125 P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~-vi~~~~~~~  203 (364)
T 1gu7_A          125 PNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFN-SISVIRDRP  203 (364)
T ss_dssp             CCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCE-EEEEECCCT
T ss_pred             CCccccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCE-EEEEecCcc
Confidence            98           89999999887 67899999977 689999 99999998 99999999999999995 566654443


Q ss_pred             ----HHHHHHHhCCCeEEecCCC-cccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC-Cc
Q 017426          226 ----RLSVAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EM  299 (372)
Q Consensus       226 ----~~~~~~~lg~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~  299 (372)
                          +.++++++|++.++++++. ..++.+.+++++...+.++|++|||+|++.. ..++++|+++|+++.+|.... ..
T Consensus       204 ~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~~-~~~~~~l~~~G~~v~~g~~~~~~~  282 (364)
T 1gu7_A          204 NLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSS-TGIARKLNNNGLMLTYGGMSFQPV  282 (364)
T ss_dssp             THHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHH-HHHHHTSCTTCEEEECCCCSSCCE
T ss_pred             ccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchhH-HHHHHHhccCCEEEEecCCCCCCc
Confidence                3677899999998876421 1467777776641125689999999998644 488999999999999986442 33


Q ss_pred             cccchhhhccCcEEEeeccC----------CCcHHHHHHHHHcCCCCCCCceEEEecC-ChHHHHHHHHHHhcCCCceEE
Q 017426          300 TVPLTPAAVREVDVVGVFRY----------KNTWPLCLELLRSGKIDVKPLVTHRFGF-SQKEVEEAFETSARGGTAIKV  368 (372)
Q Consensus       300 ~~~~~~~~~~~~~i~~~~~~----------~~~~~~~~~ll~~g~~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~gkv  368 (372)
                      .++...+..+++++.++...          .+.++++++++++|.+.+.+.  .++++ +++++++|++.+.++...||+
T Consensus       283 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~--~~~~~~~l~~~~~A~~~~~~~~~~gKv  360 (364)
T 1gu7_A          283 TIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKS--IETLYDGTKPLHELYQDGVANSKDGKQ  360 (364)
T ss_dssp             EECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCC--EEEECCSSSCHHHHHHHHHHTGGGSCE
T ss_pred             ccCHHHHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccc--eEEecCchhhHHHHHHHHHhCCCCceE
Confidence            45555677899999987543          256889999999999965544  55666 337999999999888788999


Q ss_pred             EEeC
Q 017426          369 MFNL  372 (372)
Q Consensus       369 vv~~  372 (372)
                      |+++
T Consensus       361 vv~~  364 (364)
T 1gu7_A          361 LITY  364 (364)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            9975

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=1.9e-45  Score=340.98  Aligned_cols=310  Identities=23%  Similarity=0.295  Sum_probs=257.5

Q ss_pred             ceeEEEecC---CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        18 ~~~~~~~~~---~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      ||++++..+   +.+++.+.|.|+|+++||+|||.++|+|++|++++.|.+.......+|.++|||++|+|+++|++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD   81 (333)
T ss_dssp             CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCS
T ss_pred             cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCC
Confidence            788888754   46899999999999999999999999999999998874311100357899999999999999999999


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccc--cccc
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE--GAMC  172 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~--aa~~  172 (372)
                      |++        ||||...+.                           ..|+|+||+.+|++.++++|+++++++  |+++
T Consensus        82 ~~~--------GdrV~~~~~---------------------------~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l  126 (333)
T 1wly_A           82 FTV--------GERVCTCLP---------------------------PLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGL  126 (333)
T ss_dssp             CCT--------TCEEEECSS---------------------------SCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHH
T ss_pred             CCC--------CCEEEEecC---------------------------CCCcceeEEEecHHHcEeCCCCCChHHhCccch
Confidence            999        888865210                           259999999999999999999999999  7766


Q ss_pred             c-hhHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHH
Q 017426          173 E-PLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIA  249 (372)
Q Consensus       173 ~-~~~~a~~~l~-~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~  249 (372)
                      + ++.|||+++. .+++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++++|++.+++++.  .++.
T Consensus       127 ~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~~~~d~~~--~~~~  203 (333)
T 1wly_A          127 MLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCHHTINYST--QDFA  203 (333)
T ss_dssp             HHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHH
T ss_pred             hhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEECCC--HHHH
Confidence            5 8889999996 589999999999997 9999999999999999 6889999999999999999998877643  5677


Q ss_pred             HHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC-Cccccch-hhhccC--cEEEeeccC------
Q 017426          250 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLT-PAAVRE--VDVVGVFRY------  319 (372)
Q Consensus       250 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~-~~~~~~--~~i~~~~~~------  319 (372)
                      +.+.+..  .+.++|++||++|+ ..++.++++|+++|+++.+|.... ...++.. .+..++  +++.++...      
T Consensus       204 ~~i~~~~--~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~  280 (333)
T 1wly_A          204 EVVREIT--GGKGVDVVYDSIGK-DTLQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRS  280 (333)
T ss_dssp             HHHHHHH--TTCCEEEEEECSCT-TTHHHHHHTEEEEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGGGGSCSHH
T ss_pred             HHHHHHh--CCCCCeEEEECCcH-HHHHHHHHhhccCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeehhhccCHH
Confidence            7776654  24689999999998 588999999999999999986543 2345555 566788  888886431      


Q ss_pred             --CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          320 --KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       320 --~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                        .+.++++++++++|.+  ++.++++|++  +++++|++.+.++...+|+|+++
T Consensus       281 ~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  331 (333)
T 1wly_A          281 EIDEGSKCLFDAVKAGVL--HSSVAKTFPL--REAAAAHKYMGGRQTIGSIVLLP  331 (333)
T ss_dssp             HHHHHHHHHHHHHHTTSC--CCCEEEEEEG--GGHHHHHHHHHHCSCCSEEEEET
T ss_pred             HHHHHHHHHHHHHHCCCc--CCCcceEEeH--HHHHHHHHHHHcCCCceEEEEEe
Confidence              1358899999999998  6788999999  99999999999888889999874

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.5e-45  Score=339.43  Aligned_cols=307  Identities=23%  Similarity=0.249  Sum_probs=257.6

Q ss_pred             ceeEEEecC---CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        18 ~~~~~~~~~---~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      ||++++..+   +.+++.++|.|.|+++||+|||.++|+|++|++.+.|.+.   ...+|.++|||++|+|+++|++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~p~v~G~E~~G~V~~vG~~v~~   78 (327)
T 1qor_A            2 ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYP---PPSLPSGLGTEAAGIVSKVGSGVKH   78 (327)
T ss_dssp             CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSC---CSSSSBCCCSCEEEEEEEECTTCCS
T ss_pred             cEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC---CCCCCCCCCceeEEEEEEECCCCCC
Confidence            788887753   4689999999999999999999999999999999987542   1357999999999999999999999


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-  173 (372)
                      |++        ||||.. +.                          ..+|+|+||+.+|++.++++|+++++++|+.++ 
T Consensus        79 ~~~--------GdrV~~-~g--------------------------~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~  123 (327)
T 1qor_A           79 IKA--------GDRVVY-AQ--------------------------SALGAYSSVHNIIADKAAILPAAISFEQAAASFL  123 (327)
T ss_dssp             CCT--------TCEEEE-SC--------------------------CSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHH
T ss_pred             CCC--------CCEEEE-CC--------------------------CCCceeeeEEEecHHHcEECCCCCCHHHHHHhhh
Confidence            999        888842 10                          125999999999999999999999999987665 


Q ss_pred             hhHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHH
Q 017426          174 PLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE  251 (372)
Q Consensus       174 ~~~~a~~~l~-~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~  251 (372)
                      +++|||+++. .+++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++++|++.++++.+  +++.+.
T Consensus       124 ~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~  200 (327)
T 1qor_A          124 KGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVINYRE--EDLVER  200 (327)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHH
T ss_pred             HHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEECCC--ccHHHH
Confidence            8889999997 689999999999996 9999999999999999 6888999999999999999998877543  566666


Q ss_pred             HHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-ccccchhhhcc-CcEEEeecc---------CC
Q 017426          252 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVR-EVDVVGVFR---------YK  320 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~-~~~i~~~~~---------~~  320 (372)
                      +.+..  .+.++|++||++| ...++.++++|+++|+++.+|..... ..++...+..+ .+.+.+...         ..
T Consensus       201 ~~~~~--~~~~~D~vi~~~g-~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (327)
T 1qor_A          201 LKEIT--GGKKVRVVYDSVG-RDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELT  277 (327)
T ss_dssp             HHHHT--TTCCEEEEEECSC-GGGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHH
T ss_pred             HHHHh--CCCCceEEEECCc-hHHHHHHHHHhcCCCEEEEEecCCCCCCccCHHHHhhccceEEEccchhhhcCCHHHHH
Confidence            66553  2458999999999 46889999999999999999865432 34555666667 777775432         13


Q ss_pred             CcHHHHHHHHHcCCCCCCCceE--EEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          321 NTWPLCLELLRSGKIDVKPLVT--HRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       321 ~~~~~~~~ll~~g~~~~~~~~~--~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +.++++++++++|.+  ++.++  ++|++  +++++|++.+.++...+|+|+++
T Consensus       278 ~~~~~~~~l~~~g~l--~~~i~~~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          278 EASNELFSLIASGVI--KVDVAEQQKYPL--KDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             HHHHHHHHHHHTTSS--CCCCCGGGEEEG--GGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             HHHHHHHHHHHCCCc--ccccccCcEEcH--HHHHHHHHHHHhCCCCceEEEeC
Confidence            457899999999999  56677  89999  99999999999888889999874

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=1.5e-44  Score=335.40  Aligned_cols=301  Identities=18%  Similarity=0.186  Sum_probs=254.9

Q ss_pred             hcceeEEEe-------cCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccc----eeEE
Q 017426           16 EVNMAAWLL-------GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE----CAGV   84 (372)
Q Consensus        16 ~~~~~~~~~-------~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e----~~G~   84 (372)
                      ++||+.+++       +++.+++.++|.|+|+++||+|||+++|+|++|+..+.+...    ..+|.++|||    ++|+
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~----~~~p~~~G~e~g~~~~G~   81 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARS----YIPPVGIGEVMRALGVGK   81 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCC----SSCCCCTTSBCCCEEEEE
T ss_pred             ccccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccc----cCCCCCCCcccCCceEEE
Confidence            458888887       368999999999999999999999999999999988765321    3456777777    7999


Q ss_pred             EEEecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCC
Q 017426           85 IEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNV  164 (372)
Q Consensus        85 V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~  164 (372)
                      |++  ++|++|++        ||||++                               +|+|+||+.+|++.++++|+++
T Consensus        82 V~~--~~v~~~~v--------GdrV~~-------------------------------~G~~aey~~v~~~~~~~~P~~~  120 (336)
T 4b7c_A           82 VLV--SKHPGFQA--------GDYVNG-------------------------------ALGVQDYFIGEPKGFYKVDPSR  120 (336)
T ss_dssp             EEE--ECSTTCCT--------TCEEEE-------------------------------ECCSBSEEEECCTTCEEECTTT
T ss_pred             EEe--cCCCCCCC--------CCEEec-------------------------------cCCceEEEEechHHeEEcCCCC
Confidence            999  45889999        888885                               4899999999999999999999


Q ss_pred             Ccccc--ccc-chhHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCeE
Q 017426          165 SLEEG--AMC-EPLSVGVHAC-RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNI  238 (372)
Q Consensus       165 ~~~~a--a~~-~~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~v  238 (372)
                      ++.++  +.+ .++.|||+++ +.+++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.+.+ +++|++.+
T Consensus       121 ~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~~  199 (336)
T 4b7c_A          121 APLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEELGFDGA  199 (336)
T ss_dssp             SCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCSEE
T ss_pred             CchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCEE
Confidence            77775  444 4789999999 6789999999999998 9999999999999999 789999999999998 89999998


Q ss_pred             EecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC-------CccccchhhhccCc
Q 017426          239 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-------EMTVPLTPAAVREV  311 (372)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~  311 (372)
                      +++..  +++.+.+++..   ++++|++||++|+ ..+..++++|+++|+++.+|....       ...++...+..+++
T Consensus       200 ~~~~~--~~~~~~~~~~~---~~~~d~vi~~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~  273 (336)
T 4b7c_A          200 IDYKN--EDLAAGLKREC---PKGIDVFFDNVGG-EILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRA  273 (336)
T ss_dssp             EETTT--SCHHHHHHHHC---TTCEEEEEESSCH-HHHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTC
T ss_pred             EECCC--HHHHHHHHHhc---CCCceEEEECCCc-chHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCc
Confidence            87644  67777777653   5689999999997 588999999999999999986441       12455566788999


Q ss_pred             EEEeeccC------CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          312 DVVGVFRY------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       312 ~i~~~~~~------~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      ++.++..+      .+.++++++++++|.+  ++.+..++++  +++++|++.+.+++..||+|+++
T Consensus       274 ~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          274 RMEGMVVMDYAQRFPEGLKEMATWLAEGKL--QSREDIVEGL--ETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             EEEECCGGGGGGGHHHHHHHHHHHHHTTSS--CCCEEEEECG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             EEEEEEhhhhhhhhHHHHHHHHHHHHCCCc--ccceeeecCH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            99998764      2678899999999999  5556666788  99999999999999999999985

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=5.5e-46  Score=343.39  Aligned_cols=306  Identities=17%  Similarity=0.191  Sum_probs=255.0

Q ss_pred             ceeEEEecCC---ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        18 ~~~~~~~~~~---~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      ||++++.+++   .+++.++|.|+|+++||+|||+++|+|++|++++.|.+.  ....+|.++|||++|+|+++|  +++
T Consensus         1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~v~G~E~~G~V~~~G--v~~   76 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGK--IIRHFPMIPGIDFAGTVHASE--DPR   76 (324)
T ss_dssp             CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTT--CCCSSSBCCCSEEEEEEEEES--STT
T ss_pred             CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCC--CCCCCCccccceeEEEEEEeC--CCC
Confidence            7899988665   489999999999999999999999999999999998543  124679999999999999998  678


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  173 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-  173 (372)
                      |++        ||||++.+.   .                  + +...+|+|+||+.+|++.++++|+++++++|++++ 
T Consensus        77 ~~v--------GdrV~~~~~---~------------------~-g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  126 (324)
T 3nx4_A           77 FHA--------GQEVLLTGW---G------------------V-GENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGT  126 (324)
T ss_dssp             CCT--------TCEEEEECT---T------------------B-TTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHH
T ss_pred             CCC--------CCEEEEccc---c------------------c-CCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhh
Confidence            999        888886421   0                  0 11357999999999999999999999999999887 


Q ss_pred             hhHHHHHHH---HhcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccH
Q 017426          174 PLSVGVHAC---RRANIGPET-NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI  248 (372)
Q Consensus       174 ~~~~a~~~l---~~~~~~~g~-~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~  248 (372)
                      .+.|||.++   .+.++++++ +|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|++.++++.+..  .
T Consensus       127 ~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~--~  203 (324)
T 3nx4_A          127 AGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGANRILSRDEFA--E  203 (324)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCSEEEEGGGSS--C
T ss_pred             HHHHHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecCCHH--H
Confidence            567888877   346677743 4999998 9999999999999999 688988999999999999999998865422  1


Q ss_pred             HHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-ccccchhhhccCcEEEeeccC-------C
Q 017426          249 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-------K  320 (372)
Q Consensus       249 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-------~  320 (372)
                         ++++   .++++|++||++|++ .++.++++|+++|+++.+|..... ..++...+..+++++.++...       .
T Consensus       204 ---~~~~---~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  276 (324)
T 3nx4_A          204 ---SRPL---EKQLWAGAIDTVGDK-VLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRA  276 (324)
T ss_dssp             ---CCSS---CCCCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTCSEEEEESHHHHHHCCEEEECCSTTCCHHHHH
T ss_pred             ---HHhh---cCCCccEEEECCCcH-HHHHHHHHHhcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEeccccChHHHH
Confidence               2222   246899999999985 899999999999999999865543 455666778899999997643       2


Q ss_pred             CcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          321 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       321 ~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +.++++++++++|.+  ++. +++|++  +++++|++.+.+++..||+|+++
T Consensus       277 ~~~~~~~~l~~~g~l--~~~-~~~~~l--~~~~~A~~~~~~~~~~gkvvv~~  323 (324)
T 3nx4_A          277 EAWARLVKDLPESFY--AQA-ATEITL--ADAPKFADAIINNQVQGRTLVKI  323 (324)
T ss_dssp             HHHHHHHHHSCHHHH--HHH-EEEEEG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHHHHHcCCC--CCC-ceeEeH--HHHHHHHHHHHhCCCCceEEEec
Confidence            457888999999988  455 899999  99999999999999999999975

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=6e-45  Score=341.05  Aligned_cols=310  Identities=20%  Similarity=0.257  Sum_probs=255.7

Q ss_pred             cchhcceeEEEecCC-----ceeE-EEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEE
Q 017426           13 DGEEVNMAAWLLGVN-----TLKI-QPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE   86 (372)
Q Consensus        13 ~~~~~~~~~~~~~~~-----~l~~-~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~   86 (372)
                      ..+.+||++++.+++     .+++ .++|.|.|+++||+|||.++|+|++|++.+.|.+..  ...+|.++|||++|+|+
T Consensus        19 ~~~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~P~i~G~E~~G~V~   96 (362)
T 2c0c_A           19 YFQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDP--SVKPPFDIGFEGIGEVV   96 (362)
T ss_dssp             HHCCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCT--TCCSCEECCSEEEEEEE
T ss_pred             cchhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCC--CCCCCCCCCceeEEEEE
Confidence            355679999998753     5889 999999999999999999999999999999885421  23679999999999999


Q ss_pred             EecCCCc-cccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCC
Q 017426           87 KVGSEVK-TLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVS  165 (372)
Q Consensus        87 ~vG~~v~-~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~  165 (372)
                      ++|++|+ +|++        ||||++.                             ..|+|+||+.+|++.++++|+. +
T Consensus        97 ~vG~~V~~~~~v--------GdrV~~~-----------------------------~~G~~aey~~v~~~~~~~~P~~-~  138 (362)
T 2c0c_A           97 ALGLSASARYTV--------GQAVAYM-----------------------------APGSFAEYTVVPASIATPVPSV-K  138 (362)
T ss_dssp             EECTTGGGTCCT--------TCEEEEE-----------------------------CSCCSBSEEEEEGGGCEECSSS-C
T ss_pred             EECCCccCCCCC--------CCEEEEc-----------------------------cCCcceeEEEEcHHHeEECCCC-c
Confidence            9999999 9999        8888762                             2599999999999999999996 4


Q ss_pred             cccccccchhHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCC
Q 017426          166 LEEGAMCEPLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  243 (372)
Q Consensus       166 ~~~aa~~~~~~~a~~~l~-~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~  243 (372)
                      ++.|++..++.|||+++. .+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|++.+++++.
T Consensus       139 ~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~  217 (362)
T 2c0c_A          139 PEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSLGCDRPINYKT  217 (362)
T ss_dssp             HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTT
T ss_pred             hHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHcCCcEEEecCC
Confidence            444444558889999995 588999999999996 9999999999999999 6899999999999999999999887653


Q ss_pred             CcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCc-----------cccchhhhccCcE
Q 017426          244 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-----------TVPLTPAAVREVD  312 (372)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-----------~~~~~~~~~~~~~  312 (372)
                        +++.+.+++.   .+.++|++|||+|+ ..++.++++|+++|+++.+|......           .+ ...+..++++
T Consensus       218 --~~~~~~~~~~---~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  290 (362)
T 2c0c_A          218 --EPVGTVLKQE---YPEGVDVVYESVGG-AMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTL-PAKLLKKSAS  290 (362)
T ss_dssp             --SCHHHHHHHH---CTTCEEEEEECSCT-HHHHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTH-HHHHHHHTCE
T ss_pred             --hhHHHHHHHh---cCCCCCEEEECCCH-HHHHHHHHHHhcCCEEEEEeCCCCcCccccccccccccc-HHHHHhhcce
Confidence              5666666554   24689999999998 58899999999999999998543211           11 1456778899


Q ss_pred             EEeeccC------CCcHHHHHHHHHcCCCCCCCc------eEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          313 VVGVFRY------KNTWPLCLELLRSGKIDVKPL------VTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       313 i~~~~~~------~~~~~~~~~ll~~g~~~~~~~------~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +.++...      .+.++++++++++|++.+...      +++.|++  +++++|++.+.++...||+|+++
T Consensus       291 i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  360 (362)
T 2c0c_A          291 VQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGL--ESIFRAVNYMYMGKNTGKIVVEL  360 (362)
T ss_dssp             EEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBST--THHHHHHHHHHTTCCSBEEEEEC
T ss_pred             EEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCH--HHHHHHHHHHHcCCCCceEEEEc
Confidence            9987643      346889999999999943322      2355788  99999999999888889999874

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=2.6e-44  Score=338.51  Aligned_cols=313  Identities=21%  Similarity=0.276  Sum_probs=249.8

Q ss_pred             chhcceeEEEecC---CceeE-EEecCCCC-CCCcEEEEEeeeeeCcccHHhhhhcccC------------CcccCCCcc
Q 017426           14 GEEVNMAAWLLGV---NTLKI-QPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCA------------DFVVKEPMV   76 (372)
Q Consensus        14 ~~~~~~~~~~~~~---~~l~~-~~~~~p~~-~~~evlV~v~~~~~~~~d~~~~~g~~~~------------~~~~~~p~~   76 (372)
                      ++.+||++++..+   ..+++ .++|.|.| +++||+|||.++|+|++|++++.|....            ....++|.+
T Consensus        18 ~~~~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~v   97 (375)
T 2vn8_A           18 LYFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLT   97 (375)
T ss_dssp             CCCCEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSBC
T ss_pred             cCccceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCcc
Confidence            3456888888754   46888 89999985 9999999999999999999998874210            111237999


Q ss_pred             cccceeEEEEEecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCc
Q 017426           77 IGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL  156 (372)
Q Consensus        77 ~G~e~~G~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~  156 (372)
                      +|||++|+|+++|++|++|++        ||||++.+..                         ...|+|+||+.++++.
T Consensus        98 ~G~E~~G~V~~vG~~V~~~~v--------GDrV~~~~~~-------------------------~~~G~~aey~~v~~~~  144 (375)
T 2vn8_A           98 LGRDVSGVVMECGLDVKYFKP--------GDEVWAAVPP-------------------------WKQGTLSEFVVVSGNE  144 (375)
T ss_dssp             CCCEEEEEEEEECTTCCSCCT--------TCEEEEECCT-------------------------TSCCSSBSEEEEEGGG
T ss_pred             cceeeeEEEEEeCCCCCCCCC--------CCEEEEecCC-------------------------CCCccceeEEEEcHHH
Confidence            999999999999999999999        8888764310                         1369999999999999


Q ss_pred             eEECCCCCCcccccccc-hhHHHHHHHH-hcC----CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH
Q 017426          157 CFKLPDNVSLEEGAMCE-PLSVGVHACR-RAN----IGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV  229 (372)
Q Consensus       157 ~~~~P~~~~~~~aa~~~-~~~~a~~~l~-~~~----~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~  229 (372)
                      ++++|+++++++|++++ .+.|||+++. .++    +++|++|||+|+ |++|++++|+|+..|+ .|++++ ++++.++
T Consensus       145 ~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~-~~~~~~~  222 (375)
T 2vn8_A          145 VSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVC-SQDASEL  222 (375)
T ss_dssp             EEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHH
T ss_pred             eeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEe-ChHHHHH
Confidence            99999999999999887 5679999995 588    999999999995 9999999999999999 577776 6788999


Q ss_pred             HHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcH-HHHHHHHHHhccCCEEEEEcCCCCC-cc---ccc-
Q 017426          230 AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVGMGHHE-MT---VPL-  303 (372)
Q Consensus       230 ~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~---~~~-  303 (372)
                      ++++|++.++++.+  .++.+.+++     ..++|++||++|++ ..+..++++++++|+++.+|..... ..   +.. 
T Consensus       223 ~~~lGa~~v~~~~~--~~~~~~~~~-----~~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~  295 (375)
T 2vn8_A          223 VRKLGADDVIDYKS--GSVEEQLKS-----LKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADG  295 (375)
T ss_dssp             HHHTTCSEEEETTS--SCHHHHHHT-----SCCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHH
T ss_pred             HHHcCCCEEEECCc--hHHHHHHhh-----cCCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccch
Confidence            99999999887654  456555533     35899999999987 4568888999999999999854321 00   000 


Q ss_pred             -----hhhhc-------cCcEEEeeccC--CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEE
Q 017426          304 -----TPAAV-------REVDVVGVFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM  369 (372)
Q Consensus       304 -----~~~~~-------~~~~i~~~~~~--~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvv  369 (372)
                           ..+..       +...+......  .+.++++++++++|++  ++.++++|++  +++++|++.+.+++..+|+|
T Consensus       296 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvv  371 (375)
T 2vn8_A          296 MLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKI--RPVIEQTFPF--SKVPEAFLKVERGHARGKTV  371 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTTSC--CCCEEEEEEG--GGHHHHHHHHHHCCCSSEEE
T ss_pred             hheeehhhccccccccccCcceEEEEeCCCHHHHHHHHHHHHCCCc--ccCcCeEECH--HHHHHHHHHHHcCCCCCeEE
Confidence                 01111       44455443322  3467999999999998  6788899999  99999999999988889999


Q ss_pred             EeC
Q 017426          370 FNL  372 (372)
Q Consensus       370 v~~  372 (372)
                      +++
T Consensus       372 i~~  374 (375)
T 2vn8_A          372 INV  374 (375)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            975

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=6.2e-45  Score=337.16  Aligned_cols=313  Identities=19%  Similarity=0.255  Sum_probs=250.7

Q ss_pred             chhcceeEEEecCC---ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecC
Q 017426           14 GEEVNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (372)
Q Consensus        14 ~~~~~~~~~~~~~~---~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (372)
                      |+.+||++++.+++   .+++.++|.|+|+++||+|||.++|+|++|++++.|...  ....+|.++|||++|+|+++  
T Consensus         1 m~~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~i~G~E~~G~V~~~--   76 (330)
T 1tt7_A            1 MSTLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGN--IVREYPLILGIDAAGTVVSS--   76 (330)
T ss_dssp             -CCEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCT--TCSSCSEECCSEEEEEEEEC--
T ss_pred             CCCcceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCC--CcCCCCccccceEEEEEEEc--
Confidence            34568999998654   789999999999999999999999999999999887532  12357899999999999996  


Q ss_pred             CCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccccc
Q 017426           91 EVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA  170 (372)
Q Consensus        91 ~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa  170 (372)
                      ++++|++        ||||++.+..                     ++ ...+|+|+||+.+|++.++++|+++++++|+
T Consensus        77 ~v~~~~v--------GdrV~~~~~~---------------------~g-~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa  126 (330)
T 1tt7_A           77 NDPRFAE--------GDEVIATSYE---------------------LG-VSRDGGLSEYASVPGDWLVPLPQNLSLKEAM  126 (330)
T ss_dssp             SSTTCCT--------TCEEEEESTT---------------------BT-TTBCCSSBSSEEECGGGEEECCTTCCHHHHH
T ss_pred             CCCCCCC--------CCEEEEcccc---------------------cC-CCCCccceeEEEecHHHeEECCCCCCHHHHh
Confidence            4688999        8888864210                     01 1246999999999999999999999999999


Q ss_pred             ccc-hhHHHHHHH---HhcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCC
Q 017426          171 MCE-PLSVGVHAC---RRANIGPET-NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN  244 (372)
Q Consensus       171 ~~~-~~~~a~~~l---~~~~~~~g~-~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~  244 (372)
                      +++ .+.|||.++   +++++++|+ +|||+|+ |++|++++|+|+.+|++ |+++++++++.++++++|++.++++++.
T Consensus       127 ~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~-vi~~~~~~~~~~~~~~lGa~~v~~~~~~  205 (330)
T 1tt7_A          127 VYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYD-VVASTGNREAADYLKQLGASEVISREDV  205 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCC-EEEEESSSSTHHHHHHHTCSEEEEHHHH
T ss_pred             hccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHcCCcEEEECCCc
Confidence            887 456777765   457899997 9999998 99999999999999995 8888888999999999999998875321


Q ss_pred             cccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC-CccccchhhhccCcEEEeeccC----
Q 017426          245 LQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY----  319 (372)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~----  319 (372)
                        + .+.++++   .+.++|++||++|+ ..+..++++++++|+++.+|.... ...++...+..+++++.++...    
T Consensus       206 --~-~~~~~~~---~~~~~d~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  278 (330)
T 1tt7_A          206 --Y-DGTLKAL---SKQQWQGAVDPVGG-KQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPM  278 (330)
T ss_dssp             --C-SSCCCSS---CCCCEEEEEESCCT-HHHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCH
T ss_pred             --h-HHHHHHh---hcCCccEEEECCcH-HHHHHHHHhhcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEEeccccCH
Confidence              0 0111111   24579999999998 488999999999999999986543 3345556677899999997422    


Q ss_pred             ---CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          320 ---KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       320 ---~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                         .+.++++++++++|.+  .+.++++|++  +++++|++.+.++...||+|+++
T Consensus       279 ~~~~~~~~~~~~~~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          279 DVRAAVWERMSSDLKPDQL--LTIVDREVSL--EETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             HHHHHHHHHTTTTSCCSCS--TTSEEEEECS--TTHHHHHHHTTTTCCSSEEEECC
T ss_pred             HHHHHHHHHHHHHHhcCCc--ccccceEEcH--HHHHHHHHHHHcCCCCCeEEEeC
Confidence               1235556666667777  6788899999  99999999999888889999874

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=1.3e-44  Score=340.74  Aligned_cols=309  Identities=18%  Similarity=0.201  Sum_probs=249.6

Q ss_pred             hhcceeEEEe-cCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhccc-------CC------------------
Q 017426           15 EEVNMAAWLL-GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRC-------AD------------------   68 (372)
Q Consensus        15 ~~~~~~~~~~-~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~-------~~------------------   68 (372)
                      +.+||+++.. ++..+++.++|.|+|+++||+|||.++++|++|++++.|...       +.                  
T Consensus         5 ~~~mka~v~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~   84 (379)
T 3iup_A            5 ALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSM   84 (379)
T ss_dssp             EEEEEEEECTTSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHH
T ss_pred             hhhHHHHHhcCCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCcccccccc
Confidence            3457887764 456799999999999999999999999999999999987421       00                  


Q ss_pred             -cccCCCcccccceeEEEEEecCCC-ccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcc
Q 017426           69 -FVVKEPMVIGHECAGVIEKVGSEV-KTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL  146 (372)
Q Consensus        69 -~~~~~p~~~G~e~~G~V~~vG~~v-~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  146 (372)
                       ....+|.++|||++|+|+++|++| ++|++        ||||++.                             .+|+|
T Consensus        85 ~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~v--------GdrV~~~-----------------------------~~G~~  127 (379)
T 3iup_A           85 AGRLDASMPVGNEGAGVVVEAGSSPAAQALM--------GKTVAAI-----------------------------GGAMY  127 (379)
T ss_dssp             GGGTTEEEECCSCEEEEEEEECSSHHHHTTT--------TCEEEEC-----------------------------CSCCS
T ss_pred             ccccCCCccceeeeEEEEEEeCCCcccCCCC--------CCEEEec-----------------------------CCCcc
Confidence             023578999999999999999999 89999        8888862                             25999


Q ss_pred             eeEEEecCCceEECCCCCCcccccccc-hhHHHHHHHHhcCCCCCCEEEEE--CCCHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          147 ANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACRRANIGPETNVLIM--GAGPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       147 ~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~--Gag~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      +||+.+|++.++++|+++++++|++++ ...|||++++... ++|++|||+  |+|++|++++|+|+.+|+ +|++++++
T Consensus       128 aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga-~Vi~~~~~  205 (379)
T 3iup_A          128 SQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMVETMR-LEGHSALVHTAAASNLGQMLNQICLKDGI-KLVNIVRK  205 (379)
T ss_dssp             BSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHHHHHH-HTTCSCEEESSTTSHHHHHHHHHHHHHTC-CEEEEESS
T ss_pred             eeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhc-cCCCEEEEECCCCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence            999999999999999999999999776 5667898887766 899999999  459999999999999999 58888899


Q ss_pred             hhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhc-----cC-----------C
Q 017426          224 DYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATC-----AG-----------G  287 (372)
Q Consensus       224 ~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~-----~~-----------G  287 (372)
                      +++.++++++|++.++++..  +++.+.+++++.  +.++|++|||+|++.....++++|+     ++           |
T Consensus       206 ~~~~~~~~~lGa~~~~~~~~--~~~~~~v~~~t~--~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g  281 (379)
T 3iup_A          206 QEQADLLKAQGAVHVCNAAS--PTFMQDLTEALV--STGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHK  281 (379)
T ss_dssp             HHHHHHHHHTTCSCEEETTS--TTHHHHHHHHHH--HHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCE
T ss_pred             HHHHHHHHhCCCcEEEeCCC--hHHHHHHHHHhc--CCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCc
Confidence            99999999999999988643  678888887753  4589999999998767788888875     44           5


Q ss_pred             EEEEEcCCCCCccccchhhhccCcEEEeeccC-----------CCcHHHHHHHHHcCCCCCCCceEEEecCChHHH--HH
Q 017426          288 KVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEV--EE  354 (372)
Q Consensus       288 ~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-----------~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~--~~  354 (372)
                      +++.+|.... ...++..+..+++++.++...           .+.++++++++.+ .+  .+.++++|++  +++  ++
T Consensus       282 ~iv~~G~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l--~~~i~~~~~l--~~~~~~~  355 (379)
T 3iup_A          282 QVYLYGGLDT-SPTEFNRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-TF--ASHYSKEISL--AEVLDLD  355 (379)
T ss_dssp             EEEECCCSEE-EEEEECCCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TT--CCCCSEEEEH--HHHTCHH
T ss_pred             eEEEecCCCC-CccccccccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cC--CCcceEEecH--HHhhhHH
Confidence            6655554321 123344556678888886532           1234566666666 34  7788899999  999  99


Q ss_pred             HHHHHhcCCCceEEEEeC
Q 017426          355 AFETSARGGTAIKVMFNL  372 (372)
Q Consensus       355 A~~~~~~~~~~gkvvv~~  372 (372)
                      |++.+.+++..||+|+++
T Consensus       356 A~~~l~~~~~~gKvVv~~  373 (379)
T 3iup_A          356 MIAVYNKRATGEKYLINP  373 (379)
T ss_dssp             HHHHHTTCCTTCCEEEET
T ss_pred             HHHHHhcCCCCceEEEeC
Confidence            999999998999999874

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=6.7e-43  Score=326.90  Aligned_cols=309  Identities=18%  Similarity=0.183  Sum_probs=252.8

Q ss_pred             chhcceeEEE-ecC--------CceeEEEecCCCC-CCCcEEEEEeeeeeCcccHHhhhhcc--cCCcccCCCcccccce
Q 017426           14 GEEVNMAAWL-LGV--------NTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLR--CADFVVKEPMVIGHEC   81 (372)
Q Consensus        14 ~~~~~~~~~~-~~~--------~~l~~~~~~~p~~-~~~evlV~v~~~~~~~~d~~~~~g~~--~~~~~~~~p~~~G~e~   81 (372)
                      ++++||++++ ..+        +.+++.++|.|.| +++||+|||.++|+|++|++.+.+..  .-.....+|.++|||+
T Consensus         5 ~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~E~   84 (357)
T 2zb4_A            5 AAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGG   84 (357)
T ss_dssp             -CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEEEE
T ss_pred             ccccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccccccE
Confidence            4567999999 443        5799999999999 99999999999999999998776521  0001235688999999


Q ss_pred             eEEEEEecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECC
Q 017426           82 AGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP  161 (372)
Q Consensus        82 ~G~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P  161 (372)
                      +|+|++  ++|++|++        ||||++.                              .|+|+||+.+|++.++++|
T Consensus        85 ~G~V~~--~~v~~~~v--------GdrV~~~------------------------------~G~~aey~~v~~~~~~~iP  124 (357)
T 2zb4_A           85 IGIIEE--SKHTNLTK--------GDFVTSF------------------------------YWPWQTKVILDGNSLEKVD  124 (357)
T ss_dssp             EEEEEE--ECSTTCCT--------TCEEEEE------------------------------EEESBSEEEEEGGGCEECC
T ss_pred             EEEEEe--cCCCCCCC--------CCEEEec------------------------------CCCcEEEEEEchHHceecC
Confidence            999999  88999999        8888862                              3899999999999999999


Q ss_pred             CCC-----CcccccccchhHHHHHHH-HhcCCCCC--CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH
Q 017426          162 DNV-----SLEEGAMCEPLSVGVHAC-RRANIGPE--TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE  232 (372)
Q Consensus       162 ~~~-----~~~~aa~~~~~~~a~~~l-~~~~~~~g--~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~  232 (372)
                      +++     +++.|++..+++|||+++ +.+++++|  ++|||+|+ |++|++++|+++..|+..|+++++++++.+.+++
T Consensus       125 ~~~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~  204 (357)
T 2zb4_A          125 PQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTS  204 (357)
T ss_dssp             GGGGTTCGGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred             cccccCchhHHHHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHH
Confidence            998     666555555889999999 67999999  99999998 9999999999999999668888899999888887


Q ss_pred             -hCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-ccccc-------
Q 017426          233 -IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPL-------  303 (372)
Q Consensus       233 -lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~-------  303 (372)
                       +|++.++++.+  +++.+.+++..   .+++|++||++|+ ..+..++++|+++|+++.+|..... ..++.       
T Consensus       205 ~~g~~~~~d~~~--~~~~~~~~~~~---~~~~d~vi~~~G~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~  278 (357)
T 2zb4_A          205 ELGFDAAINYKK--DNVAEQLRESC---PAGVDVYFDNVGG-NISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPA  278 (357)
T ss_dssp             TSCCSEEEETTT--SCHHHHHHHHC---TTCEEEEEESCCH-HHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHH
T ss_pred             HcCCceEEecCc--hHHHHHHHHhc---CCCCCEEEECCCH-HHHHHHHHHhccCcEEEEECCccccccCccccccchhh
Confidence             99998887653  56776676653   3389999999997 6889999999999999999864321 12221       


Q ss_pred             --hhhhccCcEEEeeccC------CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          304 --TPAAVREVDVVGVFRY------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       304 --~~~~~~~~~i~~~~~~------~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                        ..+..+++++.++...      .+.++++++++++|++  ++.+..+|++  +++++|++.+.++...+|+|+++
T Consensus       279 ~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  351 (357)
T 2zb4_A          279 IEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKL--KIKETVINGL--ENMGAAFQSMMTGGNIGKQIVCI  351 (357)
T ss_dssp             HHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCC--CCCEEEEECG--GGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             hhhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCC--cCccceecCH--HHHHHHHHHHHcCCCCceEEEEE
Confidence              4567788999987542      3568999999999999  4455566888  99999999999988889999874

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.4e-44  Score=330.06  Aligned_cols=308  Identities=19%  Similarity=0.223  Sum_probs=244.6

Q ss_pred             cceeEEEecCC---ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCc
Q 017426           17 VNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (372)
Q Consensus        17 ~~~~~~~~~~~---~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (372)
                      +||++++.+++   .+++.++|.|+|+++||+|||.++|+|++|++.+.|....  ...+|.++|||++|+|+++  +++
T Consensus         3 ~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~E~~G~V~~~--~v~   78 (328)
T 1xa0_A            3 AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKI--VKTYPFVPGIDLAGVVVSS--QHP   78 (328)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSS--CCSSSBCCCSEEEEEEEEC--CSS
T ss_pred             cceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCC--CCCCCcccCcceEEEEEec--CCC
Confidence            58999988765   7889999999999999999999999999999998875421  1357899999999999995  578


Q ss_pred             cccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc
Q 017426           94 TLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE  173 (372)
Q Consensus        94 ~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~  173 (372)
                      +|++        ||||++.+..                     + +...+|+|+||+.+|++.++++|+++++++|++++
T Consensus        79 ~~~v--------GdrV~~~~~~---------------------~-g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~  128 (328)
T 1xa0_A           79 RFRE--------GDEVIATGYE---------------------I-GVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIG  128 (328)
T ss_dssp             SCCT--------TCEEEEESTT---------------------B-TTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHH
T ss_pred             CCCC--------CCEEEEcccc---------------------C-CCCCCccceeEEEechHHeEECCCCCCHHHhhhhh
Confidence            8999        8888864210                     0 11246999999999999999999999999999887


Q ss_pred             h-hHHHHHHH---HhcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCccc
Q 017426          174 P-LSVGVHAC---RRANIGPET-NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD  247 (372)
Q Consensus       174 ~-~~~a~~~l---~~~~~~~g~-~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~  247 (372)
                      + +.|||.++   +++++++|+ +|||+|+ |++|++++|+|+.+|++ |+++++++++.++++++|++.++++.+  .+
T Consensus       129 ~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~-vi~~~~~~~~~~~~~~lGa~~~i~~~~--~~  205 (328)
T 1xa0_A          129 TAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYT-VEASTGKAAEHDYLRVLGAKEVLARED--VM  205 (328)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCC-EEEEESCTTCHHHHHHTTCSEEEECC-----
T ss_pred             hhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHcCCcEEEecCC--cH
Confidence            4 55777765   457899997 9999998 99999999999999995 888889999999999999999887643  21


Q ss_pred             HHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC-CccccchhhhccCcEEEeeccC--C----
Q 017426          248 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY--K----  320 (372)
Q Consensus       248 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~--~----  320 (372)
                       .+.++++   .+.++|++||++|++ .+..++++++++|+++.+|.... ...++...+..+++++.++...  .    
T Consensus       206 -~~~~~~~---~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  280 (328)
T 1xa0_A          206 -AERIRPL---DKQRWAAAVDPVGGR-TLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLR  280 (328)
T ss_dssp             -------C---CSCCEEEEEECSTTT-THHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCCHHHH
T ss_pred             -HHHHHHh---cCCcccEEEECCcHH-HHHHHHHhhccCCEEEEEeecCCCCCCCchhhhhhcCceEEEEecccCCHHHH
Confidence             2223322   245899999999984 88999999999999999986543 3345556677899999987422  1    


Q ss_pred             -CcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          321 -NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       321 -~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                       +.++.+.++++++ +  .+ ++++|++  +++++|++.+.+++..||+|+++
T Consensus       281 ~~~~~~~~~~~~~g-l--~~-~~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  327 (328)
T 1xa0_A          281 LRIWERLAGDLKPD-L--ER-IAQEISL--AELPQALKRILRGELRGRTVVRL  327 (328)
T ss_dssp             HHHHHHHHTTTCCC-H--HH-HEEEEEG--GGHHHHHHHHHHTCCCSEEEEEC
T ss_pred             HHHHHHHHHHHHcC-C--ce-eeeEeCH--HHHHHHHHHHHcCCCCCeEEEEe
Confidence             2345555666666 5  34 4689999  99999999999888889999875

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=7.7e-42  Score=312.43  Aligned_cols=289  Identities=25%  Similarity=0.348  Sum_probs=237.4

Q ss_pred             ceeEEEecCCce-eEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGVNTL-KIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~~~l-~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      ||++++..++.. .+.+.|.|.|+++||+|||+++|+|++|++++.|.+..  ...+|.++|||++|+|+          
T Consensus         1 Mka~~~~~~g~~~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~i~G~e~~G~V~----------   68 (302)
T 1iz0_A            1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLT--RLHPPFIPGMEVVGVVE----------   68 (302)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCCEEEEEET----------
T ss_pred             CeEEEEcCCCCchheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCCcccceEEEEEE----------
Confidence            688888876533 46689999999999999999999999999999885432  13579999999999996          


Q ss_pred             ccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-hh
Q 017426           97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PL  175 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~  175 (372)
                               ||||++.                            ..+|+|+||+.+|++.++++|+++++++|+.++ ++
T Consensus        69 ---------GdrV~~~----------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~  111 (302)
T 1iz0_A           69 ---------GRRYAAL----------------------------VPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSF  111 (302)
T ss_dssp             ---------TEEEEEE----------------------------CSSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHH
T ss_pred             ---------CcEEEEe----------------------------cCCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHH
Confidence                     5555542                            135999999999999999999999999988776 88


Q ss_pred             HHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHH
Q 017426          176 SVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE  253 (372)
Q Consensus       176 ~~a~~~l~-~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~  253 (372)
                      .|||+++. .+ +++|++|||+|+ |++|++++|+++..|+ .|+++++++++.++++++|++.++++.+ ..++.+.+ 
T Consensus       112 ~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~-~~~~~~~~-  187 (302)
T 1iz0_A          112 LTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATYAE-VPERAKAW-  187 (302)
T ss_dssp             HHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEGGG-HHHHHHHT-
T ss_pred             HHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEECCc-chhHHHHh-
Confidence            89999996 57 999999999998 9999999999999999 7899999999999999999998876532 02332222 


Q ss_pred             HHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCC-ccccchhhhccCcEEEeecc-----CCCcHHHHH
Q 017426          254 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFR-----YKNTWPLCL  327 (372)
Q Consensus       254 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~-----~~~~~~~~~  327 (372)
                             .++|++|| +|+ ..++.++++++++|+++.+|..... ..++...+..+++++.++..     ..+.+++++
T Consensus       188 -------~~~d~vid-~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  258 (302)
T 1iz0_A          188 -------GGLDLVLE-VRG-KEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEAL  258 (302)
T ss_dssp             -------TSEEEEEE-CSC-TTHHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHHHTTCHHHHHHHH
T ss_pred             -------cCceEEEE-CCH-HHHHHHHHhhccCCEEEEEeCCCCCCCCcCHHHHHhCCCeEEEEeccchhhhHHHHHHHH
Confidence                   58999999 998 5889999999999999999865432 24555667789999999764     245688999


Q ss_pred             H---HHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          328 E---LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       328 ~---ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +   ++++|++  ++.++++|++  +++++|++.+.++...+|+++++
T Consensus       259 ~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          259 GFLLPRLGREL--RPVVGPVFPF--AEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             HHHGGGBTTTB--CCCEEEEEEG--GGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             hhhHHHHcCCc--ccccceEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            9   9999998  6788999999  99999999999888889999874

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=2e-40  Score=308.83  Aligned_cols=308  Identities=17%  Similarity=0.152  Sum_probs=245.9

Q ss_pred             hhcceeEEEe-----cCC--ceeEE--EecCCC-CCCCcEEEEEeeeeeCcccHHhhhhcccCC-cccCCCcccccceeE
Q 017426           15 EEVNMAAWLL-----GVN--TLKIQ--PFELPS-LGPYDVLVRMKAVGICGSDVHYLKTLRCAD-FVVKEPMVIGHECAG   83 (372)
Q Consensus        15 ~~~~~~~~~~-----~~~--~l~~~--~~~~p~-~~~~evlV~v~~~~~~~~d~~~~~g~~~~~-~~~~~p~~~G~e~~G   83 (372)
                      +.+||+++..     +++  .+++.  ++|.|. |+++||||||.++|+|+.|. ...|..... ....+|.++|||++|
T Consensus         2 ~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G   80 (345)
T 2j3h_A            2 TATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQG   80 (345)
T ss_dssp             EEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEE
T ss_pred             CccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeec
Confidence            3456666554     455  68888  888887 89999999999999999875 344432110 002468899999999


Q ss_pred             EEEE--ecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCc--eEE
Q 017426           84 VIEK--VGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL--CFK  159 (372)
Q Consensus        84 ~V~~--vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~--~~~  159 (372)
                      ++++  +|+++++|++        ||||++                               .|+|+||+.++++.  +++
T Consensus        81 ~~~~GvV~~~v~~~~v--------GdrV~~-------------------------------~g~~aey~~v~~~~~~~~~  121 (345)
T 2j3h_A           81 YGVSRIIESGHPDYKK--------GDLLWG-------------------------------IVAWEEYSVITPMTHAHFK  121 (345)
T ss_dssp             EEEEEEEEECSTTCCT--------TCEEEE-------------------------------EEESBSEEEECCCTTTCEE
T ss_pred             ceEEEEEecCCCCCCC--------CCEEEe-------------------------------ecCceeEEEecccccceee
Confidence            9999  9999999999        888875                               38899999999876  999


Q ss_pred             CCC---CCCcccccccchhHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-Hh
Q 017426          160 LPD---NVSLEEGAMCEPLSVGVHAC-RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EI  233 (372)
Q Consensus       160 ~P~---~~~~~~aa~~~~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~l  233 (372)
                      +|+   +++++.|++..+++|||+++ +.+++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++ ++
T Consensus       122 ip~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~~  200 (345)
T 2j3h_A          122 IQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTKF  200 (345)
T ss_dssp             ECCCSSCTTGGGTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTS
T ss_pred             cCCCCCCHHHHHHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc
Confidence            996   45666444445888999999 4589999999999997 9999999999999999 6889999999999998 79


Q ss_pred             CCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC------Cccccchhhh
Q 017426          234 GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH------EMTVPLTPAA  307 (372)
Q Consensus       234 g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~  307 (372)
                      |++.++++.+ ..++.+.+++..   ++++|++||++|+ ..++.++++|+++|+++.+|....      ...++...+.
T Consensus       201 g~~~~~d~~~-~~~~~~~~~~~~---~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~  275 (345)
T 2j3h_A          201 GFDDAFNYKE-ESDLTAALKRCF---PNGIDIYFENVGG-KMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNII  275 (345)
T ss_dssp             CCSEEEETTS-CSCSHHHHHHHC---TTCEEEEEESSCH-HHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHH
T ss_pred             CCceEEecCC-HHHHHHHHHHHh---CCCCcEEEECCCH-HHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHh
Confidence            9998887643 235666666543   4689999999998 588999999999999999986432      2344556678


Q ss_pred             ccCcEEEeeccCC------CcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          308 VREVDVVGVFRYK------NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       308 ~~~~~i~~~~~~~------~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      .+.+++.++..+.      +.++++++++++|.+  ++.+.++|++  +++++|++.+.++...||+|+++
T Consensus       276 ~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i--~~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  342 (345)
T 2j3h_A          276 YKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKI--TYVEDVADGL--EKAPEALVGLFHGKNVGKQVVVV  342 (345)
T ss_dssp             HHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSS--CCCEEEEESG--GGSHHHHHHHHTTCCSSEEEEES
T ss_pred             hhceeeceeeehhhhhhHHHHHHHHHHHHHCCCC--cCcccccCCH--HHHHHHHHHHHcCCCceEEEEEe
Confidence            8999999876431      238899999999999  5677778899  99999999999998899999874

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=1e-39  Score=302.46  Aligned_cols=300  Identities=18%  Similarity=0.182  Sum_probs=244.0

Q ss_pred             hhcceeEEEec-------CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEE
Q 017426           15 EEVNMAAWLLG-------VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK   87 (372)
Q Consensus        15 ~~~~~~~~~~~-------~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~   87 (372)
                      +++||++++..       ++.+++.++|.|.|+++||+|||.++|+|+.|+.. .    .  ...+|.++|||++|+|++
T Consensus         5 ~~~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~----~--~~~~p~~~g~e~~G~Vv~   77 (333)
T 1v3u_A            5 MVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-S----K--RLKEGAVMMGQQVARVVE   77 (333)
T ss_dssp             CCEEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-T----T--TCCTTSBCCCCEEEEEEE
T ss_pred             cccccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-c----C--cCCCCcccccceEEEEEe
Confidence            34688988875       25699999999999999999999999999988732 1    1  135688999999999999


Q ss_pred             ecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCC----
Q 017426           88 VGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN----  163 (372)
Q Consensus        88 vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~----  163 (372)
                      .  +|++|++        ||||++                               .|+|+||+.+|++.++++|++    
T Consensus        78 ~--~v~~~~v--------GdrV~~-------------------------------~g~~aey~~v~~~~~~~iP~~~~~~  116 (333)
T 1v3u_A           78 S--KNSAFPA--------GSIVLA-------------------------------QSGWTTHFISDGKGLEKLLTEWPDK  116 (333)
T ss_dssp             E--SCTTSCT--------TCEEEE-------------------------------CCCSBSEEEESSTTEEECC--CCTT
T ss_pred             c--CCCCCCC--------CCEEEe-------------------------------cCceEEEEEechHHeEEcCcccccC
Confidence            5  6788999        888875                               388999999999999999997    


Q ss_pred             CCcccc-ccc-chhHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEE
Q 017426          164 VSLEEG-AMC-EPLSVGVHAC-RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV  239 (372)
Q Consensus       164 ~~~~~a-a~~-~~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~  239 (372)
                      ++++++ +.+ .+++|||+++ +.+++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++++|++.++
T Consensus       117 ~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~  195 (333)
T 1v3u_A          117 LPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAF  195 (333)
T ss_dssp             SCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEE
T ss_pred             CCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCcEEE
Confidence            888763 444 4888999999 5689999999999998 9999999999999999 688888999999999999998887


Q ss_pred             ecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC------C-ccccchhhhccCcE
Q 017426          240 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH------E-MTVPLTPAAVREVD  312 (372)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~-~~~~~~~~~~~~~~  312 (372)
                      ++.+ .+++.+.+.+..   ++++|++||++|.+ .+..++++|+++|+++.+|....      . ..++...+..++++
T Consensus       196 d~~~-~~~~~~~~~~~~---~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (333)
T 1v3u_A          196 NYKT-VNSLEEALKKAS---PDGYDCYFDNVGGE-FLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLR  270 (333)
T ss_dssp             ETTS-CSCHHHHHHHHC---TTCEEEEEESSCHH-HHHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCE
T ss_pred             ecCC-HHHHHHHHHHHh---CCCCeEEEECCChH-HHHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCce
Confidence            7542 156666666553   35899999999974 78899999999999999986432      1 11245567889999


Q ss_pred             EEeeccC-------CCcHHHHHHHHHcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          313 VVGVFRY-------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       313 i~~~~~~-------~~~~~~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +.++..+       .+.++++++++++|++.  +.+..++++  +++++|++.+.+++..||+|+++
T Consensus       271 i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          271 IEGFIVYRWQGDVREKALRDLMKWVLEGKIQ--YHEHVTKGF--ENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             EEECCGGGCCTHHHHHHHHHHHHHHHTTSSC--CCEEEEECG--GGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             EEEEehhhcchHHHHHHHHHHHHHHHCCCcc--CccccccCH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            9997643       24577899999999994  445555778  99999999999988899999975

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=2.7e-41  Score=343.65  Aligned_cols=291  Identities=19%  Similarity=0.274  Sum_probs=242.4

Q ss_pred             CCceeEEEecC--CCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccccccccC
Q 017426           26 VNTLKIQPFEL--PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTL  103 (372)
Q Consensus        26 ~~~l~~~~~~~--p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~gd~v~~  103 (372)
                      ++.+++.+.|.  |+|+++||+|||+++|+|++|+.+..|.+      ..|.++|||++|+|+++|++|++|++      
T Consensus       221 ~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~------~~~~~lG~E~aG~V~~vG~~V~~~~v------  288 (795)
T 3slk_A          221 LDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMY------PGVASLGSEGAGVVVETGPGVTGLAP------  288 (795)
T ss_dssp             STTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCC------SSCCCSCCCEEEEEEEECSSCCSSCT------
T ss_pred             ccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCC------CCCccccceeEEEEEEeCCCCCcCCC------
Confidence            46788887764  57899999999999999999999988754      34567999999999999999999999      


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-hhHHHHHHH
Q 017426          104 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC  182 (372)
Q Consensus       104 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l  182 (372)
                        ||||++.                             ..|+|+||+.++++.++++|+++++++|++++ .+.|||+++
T Consensus       289 --GDrV~~~-----------------------------~~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al  337 (795)
T 3slk_A          289 --GDRVMGM-----------------------------IPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYAL  337 (795)
T ss_dssp             --TCEEEEC-----------------------------CSSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCC
T ss_pred             --CCEEEEE-----------------------------ecCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHH
Confidence              8888762                             35999999999999999999999999999988 577899998


Q ss_pred             -HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017426          183 -RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG  260 (372)
Q Consensus       183 -~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~  260 (372)
                       +.+++++|++|||+|+ |++|++++|+|+.+|++ |+++.+++ +.++++ +|+++++++.  ..++.+.+++.+  .+
T Consensus       338 ~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~-V~~t~~~~-k~~~l~-lga~~v~~~~--~~~~~~~i~~~t--~g  410 (795)
T 3slk_A          338 VDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAE-VYATASED-KWQAVE-LSREHLASSR--TCDFEQQFLGAT--GG  410 (795)
T ss_dssp             CCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCC-EEEECCGG-GGGGSC-SCGGGEECSS--SSTHHHHHHHHS--CS
T ss_pred             HHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCE-EEEEeChH-Hhhhhh-cChhheeecC--ChhHHHHHHHHc--CC
Confidence             5689999999999997 99999999999999995 77776655 556655 9999887653  467888887764  46


Q ss_pred             CcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-------CCcHHHHHHHHHcC
Q 017426          261 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-------KNTWPLCLELLRSG  333 (372)
Q Consensus       261 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~ll~~g  333 (372)
                      .++|+|||++|+ +.++.++++|+++|+++.+|........... ...+++++.+....       .+.++++++++++|
T Consensus       411 ~GvDvVld~~gg-~~~~~~l~~l~~~Gr~v~iG~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g  488 (795)
T 3slk_A          411 RGVDVVLNSLAG-EFADASLRMLPRGGRFLELGKTDVRDPVEVA-DAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGR  488 (795)
T ss_dssp             SCCSEEEECCCT-TTTHHHHTSCTTCEEEEECCSTTCCCHHHHH-HHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTT
T ss_pred             CCeEEEEECCCc-HHHHHHHHHhcCCCEEEEeccccccCccccc-ccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcC
Confidence            789999999998 4889999999999999999865433222221 22356666655321       45688999999999


Q ss_pred             CCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          334 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      .+  ++.++++|++  +++++|++.+.+++..||+|+++
T Consensus       489 ~l--~p~~~~~~~l--~~~~eA~~~l~~g~~~GKvVl~~  523 (795)
T 3slk_A          489 VL--EPLPVTAWDV--RQAPEALRHLSQARHVGKLVLTM  523 (795)
T ss_dssp             SC--CCCCEEEEEG--GGHHHHHHHHHHTCCCBEEEEEC
T ss_pred             Cc--CCCcceeEcH--HHHHHHHHHHhcCCccceEEEec
Confidence            98  6678899999  99999999999999999999974

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.97  E-value=3.8e-30  Score=286.95  Aligned_cols=290  Identities=19%  Similarity=0.229  Sum_probs=228.2

Q ss_pred             CceeEEEecCCC-CC--CCcEEEEEeeeeeCcccHHhhhhcccCCc----ccCCCcccccceeEEEEEecCCCccccccc
Q 017426           27 NTLKIQPFELPS-LG--PYDVLVRMKAVGICGSDVHYLKTLRCADF----VVKEPMVIGHECAGVIEKVGSEVKTLVPGD   99 (372)
Q Consensus        27 ~~l~~~~~~~p~-~~--~~evlV~v~~~~~~~~d~~~~~g~~~~~~----~~~~p~~~G~e~~G~V~~vG~~v~~~~~gd   99 (372)
                      +.+.+.+.+... +.  ++||+|+|.++|+|+.|+.+..|..+...    ....|.++|+|++|+|.          +  
T Consensus      1542 ~sl~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~----------v-- 1609 (2512)
T 2vz8_A         1542 SSIRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA----------S-- 1609 (2512)
T ss_dssp             TSEEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEET----------T--
T ss_pred             CceEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEc----------c--
Confidence            456666655433 33  79999999999999999999988653211    12346789999999872          5  


Q ss_pred             cccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-hhHHH
Q 017426          100 RVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVG  178 (372)
Q Consensus       100 ~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~~a  178 (372)
                            ||+|++.                            ...|+|+||+.+|++.++++|+++++++||+++ .++||
T Consensus      1610 ------GdrV~g~----------------------------~~~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA 1655 (2512)
T 2vz8_A         1610 ------GRRVMGM----------------------------VPAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTA 1655 (2512)
T ss_dssp             ------SCCEEEE----------------------------CSSCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHH
T ss_pred             ------CCEEEEe----------------------------ecCCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHH
Confidence                  8888752                            135999999999999999999999999999988 67899


Q ss_pred             HHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHH
Q 017426          179 VHAC-RRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEV  252 (372)
Q Consensus       179 ~~~l-~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~  252 (372)
                      |+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ .|+++.+++++.+++++    +|+++++++.  +.++.+.+
T Consensus      1656 ~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~~s~~k~~~l~~~~~~lga~~v~~~~--~~~~~~~i 1732 (2512)
T 2vz8_A         1656 YYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTVGSAEKRAYLQARFPQLDETCFANSR--DTSFEQHV 1732 (2512)
T ss_dssp             HHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTCCSTTEEESS--SSHHHHHH
T ss_pred             HHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEeCChhhhHHHHhhcCCCCceEEecCC--CHHHHHHH
Confidence            9998 4588999999999986 9999999999999999 58888888999998886    6888887754  35777777


Q ss_pred             HHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCc-cccchhhhccCcEEEeeccC------CCcHHH
Q 017426          253 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY------KNTWPL  325 (372)
Q Consensus       253 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~------~~~~~~  325 (372)
                      ++.+  .+.++|+|||++++ +.+..++++|+++|+++.+|...... ......+..+++++.+....      .+.+++
T Consensus      1733 ~~~t--~g~GvDvVld~~g~-~~l~~~l~~L~~~Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~ 1809 (2512)
T 2vz8_A         1733 LRHT--AGKGVDLVLNSLAE-EKLQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQE 1809 (2512)
T ss_dssp             HHTT--TSCCEEEEEECCCH-HHHHHHHTTEEEEEEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHH
T ss_pred             HHhc--CCCCceEEEECCCc-hHHHHHHHhcCCCcEEEEeecccccccCcccccccccCCcEEEeeHHHHhhhCHHHHHH
Confidence            6553  36689999999985 68999999999999999998532111 11223355678888886532      234555


Q ss_pred             HHHHH----HcCCCCCCCceEEEecCChHHHHHHHHHHhcCCCceEEEEeC
Q 017426          326 CLELL----RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  372 (372)
Q Consensus       326 ~~~ll----~~g~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~gkvvv~~  372 (372)
                      +++++    .+|.+  .+.++++|++  +++++|++.+.+++..||+|+++
T Consensus      1810 ~l~~l~~~~~~g~l--~p~i~~~f~l--~ei~eA~~~l~~g~~~GKvVi~~ 1856 (2512)
T 2vz8_A         1810 VSELLKAGIQEGVV--QPLKCTVFPR--TKVEAAFRYMAQGKHIGKVVIQV 1856 (2512)
T ss_dssp             HHHHHHHHHTTTCS--CCCCEEEEES--STHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHHHHHHcCCc--CCCcceEecH--HHHHHHHHhhhccCccceEEEEC
Confidence            55554    45666  6778899999  99999999999998899999864

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.83  E-value=5e-20  Score=157.28  Aligned_cols=176  Identities=22%  Similarity=0.346  Sum_probs=128.7

Q ss_pred             CceEECCCCCCcccccccc-hhHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH
Q 017426          155 DLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK  231 (372)
Q Consensus       155 ~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~  231 (372)
                      +.++++|+++++++|++++ ++.|||+++. .+++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLS   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            5688999999999999886 8889999996 478999999999996 9999999999999998 6888889999998899


Q ss_pred             HhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC--Cccccchhhhcc
Q 017426          232 EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVPLTPAAVR  309 (372)
Q Consensus       232 ~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~  309 (372)
                      ++|++.++++.+  .++.+.+.+..  .+.++|++||+.|. ..++.+++.|+++|+++.+|....  ...++.. ...+
T Consensus        81 ~~g~~~~~d~~~--~~~~~~~~~~~--~~~~~D~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~  154 (198)
T 1pqw_A           81 RLGVEYVGDSRS--VDFADEILELT--DGYGVDVVLNSLAG-EAIQRGVQILAPGGRFIELGKKDVYADASLGLA-ALAK  154 (198)
T ss_dssp             TTCCSEEEETTC--STHHHHHHHHT--TTCCEEEEEECCCT-HHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGG-GGTT
T ss_pred             HcCCCEEeeCCc--HHHHHHHHHHh--CCCCCeEEEECCch-HHHHHHHHHhccCCEEEEEcCCCCcCcCcCChh-HhcC
Confidence            999988776543  45656565543  24579999999986 588999999999999999986432  2223322 2357


Q ss_pred             CcEEEeecc------C----CCcHHHHHHHHHcCCCCC
Q 017426          310 EVDVVGVFR------Y----KNTWPLCLELLRSGKIDV  337 (372)
Q Consensus       310 ~~~i~~~~~------~----~~~~~~~~~ll~~g~~~~  337 (372)
                      ++++.+...      .    .+.++++++++++|++.+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~  192 (198)
T 1pqw_A          155 SASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEV  192 (198)
T ss_dssp             TCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCC
T ss_pred             CcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccC
Confidence            777775321      1    356889999999999954

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=99.01  E-value=6.3e-10  Score=97.62  Aligned_cols=166  Identities=11%  Similarity=0.070  Sum_probs=108.1

Q ss_pred             CCEEEEcC-------CcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcc------ccccc
Q 017426          106 GDRVALEP-------GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLE------EGAMC  172 (372)
Q Consensus       106 Gd~V~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~------~aa~~  172 (372)
                      ||+|++.+       ...|++|.+|..+..++|+...     ...|...      +..+++.|+...+.      .++.+
T Consensus         7 Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g-----~~~G~~~------~~~~~~~p~~~~~~~~~~~~~~~~~   75 (248)
T 2yvl_A            7 GEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIG-----KPEGVKI------NGFEVYRPTLEEIILLGFERKTQII   75 (248)
T ss_dssp             TCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTT-----CCTTEEE------TTEEEECCCHHHHHHHTSCCSSCCC
T ss_pred             CCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcC-----CCCCCEE------EEEEEeCCCHHHHHHhcCcCCCCcc
Confidence            88888887       6788888888888877775331     1223322      34444445432222      12222


Q ss_pred             chhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh----CC-CeEEecCCCccc
Q 017426          173 EPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GA-DNIVKVSTNLQD  247 (372)
Q Consensus       173 ~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l----g~-~~v~~~~~~~~~  247 (372)
                      .+. .+...+....++++++||..|+| .|..+..+++. +. .+++++.+++..+.+++.    +. ..+.....   +
T Consensus        76 ~~~-~~~~~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~---d  148 (248)
T 2yvl_A           76 YPK-DSFYIALKLNLNKEKRVLEFGTG-SGALLAVLSEV-AG-EVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNV---D  148 (248)
T ss_dssp             CHH-HHHHHHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEECSCHHHHHHHHHHHHHTTCCTTEEEECS---C
T ss_pred             cch-hHHHHHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEc---C
Confidence            232 33355677888999999999998 59999999988 65 799999999988877653    43 22211111   1


Q ss_pred             HHHHHHHHHHHcCCcceEEEeCCCcH-HHHHHHHHHhccCCEEEEEcC
Q 017426          248 IAEEVEKIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       248 ~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      +.+..     ....++|+|+...+.+ ..+..+.+.|+++|+++....
T Consensus       149 ~~~~~-----~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  191 (248)
T 2yvl_A          149 FKDAE-----VPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP  191 (248)
T ss_dssp             TTTSC-----CCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred             hhhcc-----cCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            11100     0135799999877765 678889999999999988743

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.88  E-value=8.9e-12  Score=117.46  Aligned_cols=181  Identities=15%  Similarity=0.226  Sum_probs=127.5

Q ss_pred             ccccceeEEEEEecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC
Q 017426           76 VIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD  155 (372)
Q Consensus        76 ~~G~e~~G~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~  155 (372)
                      ..|++.++.|.++|++++++.+        |+.+....-..                   .+......|++++|+..+..
T Consensus        76 ~~g~~a~~~i~~v~~Glds~~v--------Ge~~Il~qvk~-------------------~~~~~~~~G~~~~~~~~~~~  128 (404)
T 1gpj_A           76 KRGSEAVRHLFRVASGLESMMV--------GEQEILRQVKK-------------------AYDRAARLGTLDEALKIVFR  128 (404)
T ss_dssp             EEHHHHHHHHHHHHTTTTSSST--------TCHHHHHHHHH-------------------HHHHHHHHTCCCHHHHHHHH
T ss_pred             ecCchHhhhheeeccCCCCCcC--------CcchhHHHHHH-------------------HHHHHHHcCCchHHHHHHHH
Confidence            4789999999999999999999        55431100000                   00000124677888888888


Q ss_pred             ceEECCCCCCcccccccchhHHHHHHHHhcC----CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHH-HHH
Q 017426          156 LCFKLPDNVSLEEGAMCEPLSVGVHACRRAN----IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRL-SVA  230 (372)
Q Consensus       156 ~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~----~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~-~~~  230 (372)
                      .++.+|++++...++...++.++|.+++.+.    -.+|++|+|+|+|.+|.++++.++..|++.|+++++++++. +++
T Consensus       129 ~a~~~~k~v~~~~~~~~~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la  208 (404)
T 1gpj_A          129 RAINLGKRAREETRISEGAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELA  208 (404)
T ss_dssp             HHHHHHHHHHHHSSTTCSCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH
T ss_pred             HHhhhhccCcchhhhcCCCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence            8899999888887776667778888775432    25799999999999999999999999997799999998886 678


Q ss_pred             HHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHH--HHHHH--h--ccCCEEEEEcCCC
Q 017426          231 KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMS--TALGA--T--CAGGKVCLVGMGH  296 (372)
Q Consensus       231 ~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~--~~~~~--l--~~~G~~v~~g~~~  296 (372)
                      +++|+. ++.+    .++.+    ..    .++|+||+|++.+..+.  ..+..  +  ++++..+.++...
T Consensus       209 ~~~g~~-~~~~----~~l~~----~l----~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~  267 (404)
T 1gpj_A          209 RDLGGE-AVRF----DELVD----HL----ARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN  267 (404)
T ss_dssp             HHHTCE-ECCG----GGHHH----HH----HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred             HHcCCc-eecH----HhHHH----Hh----cCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC
Confidence            889975 2222    23322    22    36999999998753321  34454  4  5567777776543

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.79  E-value=8.6e-09  Score=95.57  Aligned_cols=135  Identities=20%  Similarity=0.245  Sum_probs=94.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      +++|+|+|+|.+|+++++.++.+|+ .|+++++++++.+.+++++...+........++    .+..    .++|+||+|
T Consensus       167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~DvVI~~  237 (361)
T 1pjc_A          167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNSAEI----ETAV----AEADLLIGA  237 (361)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCHHHH----HHHH----HTCSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHH----HHHH----cCCCEEEEC
Confidence            4899999999999999999999999 799999999999988887654321111111222    2222    369999999


Q ss_pred             CCcHHH------HHHHHHHhccCCEEEEEcCCCC-------CccccchhhhccCcEEEeeccC-------------CCcH
Q 017426          270 AGLNKT------MSTALGATCAGGKVCLVGMGHH-------EMTVPLTPAAVREVDVVGVFRY-------------KNTW  323 (372)
Q Consensus       270 ~g~~~~------~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~i~~~~~~-------------~~~~  323 (372)
                      ++.+..      ....++.|+++|.++.++....       ...++...+..+++++.+....             ...+
T Consensus       238 ~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~~  317 (361)
T 1pjc_A          238 VLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTL  317 (361)
T ss_dssp             CCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHHH
T ss_pred             CCcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHHH
Confidence            987532      4567888999999999885432       2234444455677887775432             2345


Q ss_pred             HHHHHHHHcC
Q 017426          324 PLCLELLRSG  333 (372)
Q Consensus       324 ~~~~~ll~~g  333 (372)
                      +.+++++.+|
T Consensus       318 ~~l~~l~~~G  327 (361)
T 1pjc_A          318 PYVVKLANQG  327 (361)
T ss_dssp             HHHHHHHHHG
T ss_pred             HHHHHHHhCC
Confidence            6777888776

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.54  E-value=2.7e-07  Score=86.15  Aligned_cols=142  Identities=20%  Similarity=0.240  Sum_probs=97.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeE-EecCCC-------------ccc----HHH
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI-VKVSTN-------------LQD----IAE  250 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v-~~~~~~-------------~~~----~~~  250 (372)
                      ++++|+|+|+|.+|++++++++.+|+ .|+++++++++.+.++++|++.+ ++.+..             .++    ..+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            68999999999999999999999999 59999999999888888998643 111100             000    112


Q ss_pred             HHHHHHHHcCCcceEEEeCC---CcHH--H-HHHHHHHhccCCEEEEEcCCC-CC--ccccchhhhccCcEEEeeccCCC
Q 017426          251 EVEKIQKAMGTGIDVSFDCA---GLNK--T-MSTALGATCAGGKVCLVGMGH-HE--MTVPLTPAAVREVDVVGVFRYKN  321 (372)
Q Consensus       251 ~~~~~~~~~~~~~d~vid~~---g~~~--~-~~~~~~~l~~~G~~v~~g~~~-~~--~~~~~~~~~~~~~~i~~~~~~~~  321 (372)
                      .+.+..    .++|+||+|+   |.+.  . ....++.|++++.++.++... ..  ...+...+..+.+++.+....+.
T Consensus       250 ~l~~~~----~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~p~  325 (384)
T 1l7d_A          250 AVLKEL----VKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPS  325 (384)
T ss_dssp             HHHHHH----TTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSGGG
T ss_pred             HHHHHh----CCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCCcc
Confidence            233332    4799999999   5321  2 257788999999999988432 22  12233345667888888776533


Q ss_pred             c-HHHHHHHHHcCCC
Q 017426          322 T-WPLCLELLRSGKI  335 (372)
Q Consensus       322 ~-~~~~~~ll~~g~~  335 (372)
                      . ...+.+++.++.+
T Consensus       326 ~~~~~a~~l~~~~~~  340 (384)
T 1l7d_A          326 RVAADASPLFAKNLL  340 (384)
T ss_dssp             GGHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHhHH
Confidence            3 4558888877654

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.51  E-value=8.3e-07  Score=82.44  Aligned_cols=136  Identities=23%  Similarity=0.291  Sum_probs=87.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH-hCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      ++++|+|+|+|.+|+.+++.++.+|+ .|+++++++++.+.+++ +|.....+... ..    .+.+..    .++|++|
T Consensus       165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~~-~~----~l~~~~----~~~DvVi  234 (369)
T 2eez_A          165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTAT-EA----NIKKSV----QHADLLI  234 (369)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEECC-HH----HHHHHH----HHCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecCC-HH----HHHHHH----hCCCEEE
Confidence            46899999999999999999999999 68999999998887765 77653222211 12    233332    3699999


Q ss_pred             eCCCcHHH------HHHHHHHhccCCEEEEEcCCCC-------CccccchhhhccCcEEEeeccC-------------CC
Q 017426          268 DCAGLNKT------MSTALGATCAGGKVCLVGMGHH-------EMTVPLTPAAVREVDVVGVFRY-------------KN  321 (372)
Q Consensus       268 d~~g~~~~------~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~i~~~~~~-------------~~  321 (372)
                      ++++.+..      ....++.|+++|.++.++....       ..+++...+..+++.+.+....             ..
T Consensus       235 ~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~  314 (369)
T 2eez_A          235 GAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQ  314 (369)
T ss_dssp             ECCC-------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHH
T ss_pred             ECCCCCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHH
Confidence            99996532      4677888999999998875432       1122222344566776665422             23


Q ss_pred             cHHHHHHHHHcCC
Q 017426          322 TWPLCLELLRSGK  334 (372)
Q Consensus       322 ~~~~~~~ll~~g~  334 (372)
                      .++.+++++.+|.
T Consensus       315 ~~~~l~~l~~~g~  327 (369)
T 2eez_A          315 TLPYVLKLAEKGL  327 (369)
T ss_dssp             HHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhcCh
Confidence            4566777776663

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.49  E-value=4.6e-07  Score=84.34  Aligned_cols=135  Identities=18%  Similarity=0.237  Sum_probs=91.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH-hCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      +|++|+|+|+|.+|+++++.++.+|+ .|+++++++++.+.+++ +|+....++.. ..+    +.+..    .++|+||
T Consensus       167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~~-~~~----l~~~l----~~aDvVi  236 (377)
T 2vhw_A          167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYSS-AYE----LEGAV----KRADLVI  236 (377)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEECC-HHH----HHHHH----HHCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccCC-HHH----HHHHH----cCCCEEE
Confidence            58899999999999999999999999 79999999999888776 67653222211 122    33332    3689999


Q ss_pred             eCCCcHHH------HHHHHHHhccCCEEEEEcCCC-------CCccccchhhhccCcEEEeeccC-------------CC
Q 017426          268 DCAGLNKT------MSTALGATCAGGKVCLVGMGH-------HEMTVPLTPAAVREVDVVGVFRY-------------KN  321 (372)
Q Consensus       268 d~~g~~~~------~~~~~~~l~~~G~~v~~g~~~-------~~~~~~~~~~~~~~~~i~~~~~~-------------~~  321 (372)
                      +|++.+..      ....++.|+++|.++.++...       .+.+++...+..+++.+.+....             ..
T Consensus       237 ~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~phl~~~~~~~as~~~~~~  316 (377)
T 2vhw_A          237 GAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVANMPASVPKTSTYALTNA  316 (377)
T ss_dssp             ECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECBTTGGGGSHHHHHHHHHHH
T ss_pred             ECCCcCCCCCcceecHHHHhcCCCCcEEEEEecCCCCccccccCCCCCCCEEEECCEEEEecCCcchhhHHHHHHHHHHH
Confidence            99976533      567888999999999988432       12223333344566666554322             12


Q ss_pred             cHHHHHHHHHcC
Q 017426          322 TWPLCLELLRSG  333 (372)
Q Consensus       322 ~~~~~~~ll~~g  333 (372)
                      .++.+++++.+|
T Consensus       317 ~~~~~~~l~~~g  328 (377)
T 2vhw_A          317 TMPYVLELADHG  328 (377)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCC
Confidence            345666666655

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.42  E-value=7e-07  Score=83.69  Aligned_cols=139  Identities=17%  Similarity=0.207  Sum_probs=92.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCC-------------cccH----HHH
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-------------LQDI----AEE  251 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~-------------~~~~----~~~  251 (372)
                      ++++|+|+|+|.+|+.++++++.+|+ .|+++++++++.+.++++|+..+. ++..             ..++    .+.
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~lGa~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~  248 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLE-LDFKEEAGSGDGYAKVMSDAFIKAEMEL  248 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHTTCEECC-C--------CCHHHHHHSHHHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCEEEE-ecccccccccccchhhccHHHHHHHHHH
Confidence            58899999999999999999999999 699999999999988999976431 1110             0111    112


Q ss_pred             HHHHHHHcCCcceEEEeCCCcH-----HHH-HHHHHHhccCCEEEEEcCC-CCCcccc--ch-hhhccCcEEEeeccCCC
Q 017426          252 VEKIQKAMGTGIDVSFDCAGLN-----KTM-STALGATCAGGKVCLVGMG-HHEMTVP--LT-PAAVREVDVVGVFRYKN  321 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~~-----~~~-~~~~~~l~~~G~~v~~g~~-~~~~~~~--~~-~~~~~~~~i~~~~~~~~  321 (372)
                      +.+..    .++|+||++++.+     ..+ ...++.|++++.++.++.. .......  .. .+..+.+++.+....+.
T Consensus       249 l~e~~----~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~~~p~  324 (401)
T 1x13_A          249 FAAQA----KEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDLPG  324 (401)
T ss_dssp             HHHHH----HHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCSCTGG
T ss_pred             HHHHh----CCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeCCCcc
Confidence            33332    3699999995322     122 5788899999999998843 2222221  12 24567888888766533


Q ss_pred             cH-HHHHHHHHcC
Q 017426          322 TW-PLCLELLRSG  333 (372)
Q Consensus       322 ~~-~~~~~ll~~g  333 (372)
                      .+ ..+.+++.++
T Consensus       325 ~~~~~a~~ll~~~  337 (401)
T 1x13_A          325 RLPTQSSQLYGTN  337 (401)
T ss_dssp             GSHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHh
Confidence            33 2355555443

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.38  E-value=8.7e-07  Score=84.63  Aligned_cols=105  Identities=19%  Similarity=0.211  Sum_probs=83.6

Q ss_pred             hHHHHHHHHhc--CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHH
Q 017426          175 LSVGVHACRRA--NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV  252 (372)
Q Consensus       175 ~~~a~~~l~~~--~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~  252 (372)
                      ..++|+++++.  ...+|++|+|+|+|.+|+.+++.++.+|+ .|+++++++++.+.++.+|++ +.       ++.   
T Consensus       257 ~~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~-~~-------~l~---  324 (494)
T 3ce6_A          257 RHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMMEGFD-VV-------TVE---  324 (494)
T ss_dssp             HHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC-------CHH---
T ss_pred             hhhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCE-Ee-------cHH---
Confidence            34567777553  37899999999999999999999999999 799999999998888899985 21       121   


Q ss_pred             HHHHHHcCCcceEEEeCCCcHHHHH-HHHHHhccCCEEEEEcCCC
Q 017426          253 EKIQKAMGTGIDVSFDCAGLNKTMS-TALGATCAGGKVCLVGMGH  296 (372)
Q Consensus       253 ~~~~~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~  296 (372)
                       +..    .++|+||++++....+. ..++.|+++|+++.+|...
T Consensus       325 -e~l----~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~  364 (494)
T 3ce6_A          325 -EAI----GDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFD  364 (494)
T ss_dssp             -HHG----GGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSG
T ss_pred             -HHH----hCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence             121    47999999998765555 7889999999999988644

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.11  E-value=9.7e-07  Score=70.40  Aligned_cols=106  Identities=11%  Similarity=0.081  Sum_probs=74.6

Q ss_pred             hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCCCeEEecCCCcccHHHHH
Q 017426          174 PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEV  252 (372)
Q Consensus       174 ~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~  252 (372)
                      +.++++.+++......+.+|+|+|+|.+|.++++.++..|++ +.+.++++++.+ ++++++... ..+    .++.+.+
T Consensus         5 ~~sv~~~a~~~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r~~~~~~~~a~~~~~~~-~~~----~~~~~~~   78 (144)
T 3oj0_A            5 KVSIPSIVYDIVRKNGGNKILLVGNGMLASEIAPYFSYPQYK-VTVAGRNIDHVRAFAEKYEYEY-VLI----NDIDSLI   78 (144)
T ss_dssp             CCSHHHHHHHHHHHHCCCEEEEECCSHHHHHHGGGCCTTTCE-EEEEESCHHHHHHHHHHHTCEE-EEC----SCHHHHH
T ss_pred             cccHHHHHHHHHHhccCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCHHHHHHHHHHhCCce-Eee----cCHHHHh
Confidence            456777777665445589999999999999999999889986 888889888765 467788532 222    2232222


Q ss_pred             HHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcC
Q 017426          253 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       253 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                              .++|+||.+++.+.... ....+++++.++.++.
T Consensus        79 --------~~~Divi~at~~~~~~~-~~~~l~~g~~vid~~~  111 (144)
T 3oj0_A           79 --------KNNDVIITATSSKTPIV-EERSLMPGKLFIDLGN  111 (144)
T ss_dssp             --------HTCSEEEECSCCSSCSB-CGGGCCTTCEEEECCS
T ss_pred             --------cCCCEEEEeCCCCCcEe-eHHHcCCCCEEEEccC
Confidence                    36899999998752221 2256777777777764

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.02  E-value=2.2e-05  Score=72.76  Aligned_cols=126  Identities=21%  Similarity=0.254  Sum_probs=84.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEe-------------cCC-CcccH----HH
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK-------------VST-NLQDI----AE  250 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~-------------~~~-~~~~~----~~  250 (372)
                      ++.+|+|+|+|.+|+.++++++.+|+ .|++.++++.+.+.++++|++.+..             |.. -.+++    .+
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            67899999999999999999999999 6899999999999999999753211             000 00111    12


Q ss_pred             HHHHHHHHcCCcceEEEeCCCcHH------HHHHHHHHhccCCEEEEEcCC-CCCc--cccchhhhccCcEEEeeccC
Q 017426          251 EVEKIQKAMGTGIDVSFDCAGLNK------TMSTALGATCAGGKVCLVGMG-HHEM--TVPLTPAAVREVDVVGVFRY  319 (372)
Q Consensus       251 ~~~~~~~~~~~~~d~vid~~g~~~------~~~~~~~~l~~~G~~v~~g~~-~~~~--~~~~~~~~~~~~~i~~~~~~  319 (372)
                      .+.+..    .+.|+||.|+..+.      .-...++.|++++.++.++.. .+..  ..+...+..+.+++.+..+.
T Consensus       268 ~l~e~l----~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~~~~~~~~GV~~~gv~nl  341 (405)
T 4dio_A          268 LVAEHI----AKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEAGKVTEVGGVRIVGHLNV  341 (405)
T ss_dssp             HHHHHH----HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCTTEEEEETTEEEEECSSG
T ss_pred             HHHHHh----cCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCCCCeEEECCEEEEEeCCC
Confidence            233332    47999999864321      235788899999999998732 1211  11112233466777777654

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=97.97  E-value=1.3e-05  Score=70.82  Aligned_cols=160  Identities=18%  Similarity=0.191  Sum_probs=95.6

Q ss_pred             CCccccCCCCC-----CCCCccccccCCCCCcceeEEEecCCceEECCCCCC-ccc-------ccccchhHHHHHH-HHh
Q 017426          119 RCDHCKGGRYN-----LCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVS-LEE-------GAMCEPLSVGVHA-CRR  184 (372)
Q Consensus       119 ~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~-~~~-------aa~~~~~~~a~~~-l~~  184 (372)
                      .|+.|..+...     .|++...++.  ..++|.++...+..... .|.... ...       +....+....... +..
T Consensus         4 ~Cp~C~~~~~~~~~~~~C~~~~~~~~--~~~Gy~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (269)
T 1p91_A            4 SCPLCHQPLSREKNSYICPQRHQFDM--AKEGYVNLLPVQHKRSR-DPGDSAEMMQARRAFLDAGHYQPLRDAIVAQLRE   80 (269)
T ss_dssp             BCTTTCCBCEEETTEEECTTCCEEEB--CTTSCEECSCSSSSCSC-CCSSSHHHHHHHHHHHTTTTTHHHHHHHHHHHHH
T ss_pred             cCCCCCccceeCCCEEECCCCCcCCc--CCCEEEEeecccccCCC-CCCCCHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence            48899888765     8887665543  23445555444332111 122111 111       1111122222211 121


Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEecChhHHHHHHHhCCC-eEEecCCCcccHHHHHHHHHHHcCCc
Q 017426          185 ANIGPETNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       185 ~~~~~g~~vlI~Gag~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~~~~~~~~~~~~  262 (372)
                      .-..++.+||..|+|. |..+..+++.. |. .+++++.+++..+.+++.+.. .+...+....++          ..+.
T Consensus        81 ~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~----------~~~~  148 (269)
T 1p91_A           81 RLDDKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPF----------SDTS  148 (269)
T ss_dssp             HSCTTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSB----------CTTC
T ss_pred             hcCCCCCEEEEECCCC-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCC----------CCCc
Confidence            1126788999999987 88999999886 55 799999999999988876643 222222111110          1357


Q ss_pred             ceEEEeCCCcHHHHHHHHHHhccCCEEEEEcC
Q 017426          263 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       263 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      +|+|+.... ...+..+.+.|+|+|+++....
T Consensus       149 fD~v~~~~~-~~~l~~~~~~L~pgG~l~~~~~  179 (269)
T 1p91_A          149 MDAIIRIYA-PCKAEELARVVKPGGWVITATP  179 (269)
T ss_dssp             EEEEEEESC-CCCHHHHHHHEEEEEEEEEEEE
T ss_pred             eeEEEEeCC-hhhHHHHHHhcCCCcEEEEEEc
Confidence            999996443 4578899999999999988753

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=97.95  E-value=3.4e-05  Score=68.46  Aligned_cols=104  Identities=17%  Similarity=0.234  Sum_probs=73.1

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHHh----CC-CeEEecCCCcccHHHHHH
Q 017426          180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKEI----GA-DNIVKVSTNLQDIAEEVE  253 (372)
Q Consensus       180 ~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~l----g~-~~v~~~~~~~~~~~~~~~  253 (372)
                      ..+....++++++||-.|+|. |..++.+++..+ ...+++++.+++..+.+++.    +. +.+....   .++.+.  
T Consensus       103 ~i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~--  176 (277)
T 1o54_A          103 FIAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKV---RDISEG--  176 (277)
T ss_dssp             HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEEC---CCGGGC--
T ss_pred             HHHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE---CCHHHc--
Confidence            445667889999999999876 888889998864 34799999999888776653    54 2222111   122111  


Q ss_pred             HHHHHcCCcceEEEeCCCcH-HHHHHHHHHhccCCEEEEEc
Q 017426          254 KIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       254 ~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g  293 (372)
                       +   ..+.+|+|+.....+ ..+..+.+.|+++|.++...
T Consensus       177 -~---~~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~  213 (277)
T 1o54_A          177 -F---DEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  213 (277)
T ss_dssp             -C---SCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             -c---cCCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence             1   135799999766554 57788999999999998874

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.95  E-value=2.3e-05  Score=72.08  Aligned_cols=125  Identities=18%  Similarity=0.197  Sum_probs=83.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCC---Cc--------cc-H---HHHHH
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST---NL--------QD-I---AEEVE  253 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~---~~--------~~-~---~~~~~  253 (372)
                      ++.+|+|+|+|.+|+.+++.++.+|+ .|++.++++++.+.++++|+..+. .+.   ..        ++ .   .+.+.
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~~-l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWLD-LGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEECC-CC-------------CHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEe-ccccccccccchhhhhHHHHhhhHHHHH
Confidence            67899999999999999999999999 699999999999999999976431 100   00        00 0   11222


Q ss_pred             HHHHHcCCcceEEEeCCCcHH------HHHHHHHHhccCCEEEEEcCCC-CCc--cccchhhhccCcEEEeeccC
Q 017426          254 KIQKAMGTGIDVSFDCAGLNK------TMSTALGATCAGGKVCLVGMGH-HEM--TVPLTPAAVREVDVVGVFRY  319 (372)
Q Consensus       254 ~~~~~~~~~~d~vid~~g~~~------~~~~~~~~l~~~G~~v~~g~~~-~~~--~~~~~~~~~~~~~i~~~~~~  319 (372)
                      +.    -..+|+||.++..+.      .....++.|++++.++.++... +..  ..+...+..+.+++.+..+.
T Consensus       261 e~----l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e~t~~~~~~~~~gV~~~~v~nl  331 (381)
T 3p2y_A          261 DA----ITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCELTEPGRTIVHHGVTITSPLNL  331 (381)
T ss_dssp             HH----HTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTCEEEETTEEEECCSCT
T ss_pred             HH----HhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCccccccCCCeEEECCEEEEeeCCC
Confidence            22    268999999863321      2357889999999999887322 111  11111233456666666543

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.95  E-value=5.2e-05  Score=67.39  Aligned_cols=99  Identities=15%  Similarity=0.290  Sum_probs=73.0

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh----CCCeEEecCCCcccHHHHHHHHHHHc
Q 017426          184 RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       184 ~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      .+++++|++||.+|+|..+..++.+++..|+ .|++++.+++..+.+++.    |.+.+-.......+       +   .
T Consensus       117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~-------l---~  185 (298)
T 3fpf_A          117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETV-------I---D  185 (298)
T ss_dssp             HTTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGG-------G---G
T ss_pred             HcCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhh-------C---C
Confidence            3789999999999998877888888888888 699999999988877653    55333221121111       1   1


Q ss_pred             CCcceEEEeCCCcH---HHHHHHHHHhccCCEEEEEc
Q 017426          260 GTGIDVSFDCAGLN---KTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       260 ~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ...||+|+.+...+   ..++.+.+.|+|+|+++...
T Consensus       186 d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~  222 (298)
T 3fpf_A          186 GLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRT  222 (298)
T ss_dssp             GCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred             CCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEc
Confidence            36899999654433   57888999999999999765

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.94  E-value=7.3e-05  Score=56.70  Aligned_cols=95  Identities=22%  Similarity=0.232  Sum_probs=63.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .+.+|+|+|+|.+|..+++.+...|...|+++++++++.+.+...+...+ ..+..+   .+.+.+..    .++|+||+
T Consensus         4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~-~~d~~~---~~~~~~~~----~~~d~vi~   75 (118)
T 3ic5_A            4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATK-QVDAKD---EAGLAKAL----GGFDAVIS   75 (118)
T ss_dssp             TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEE-ECCTTC---HHHHHHHT----TTCSEEEE
T ss_pred             CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEE-EecCCC---HHHHHHHH----cCCCEEEE
Confidence            35689999999999999999999993368888999998887776665443 222221   12343332    47999999


Q ss_pred             CCCcHHHHHHHHHHhccCCEEEE
Q 017426          269 CAGLNKTMSTALGATCAGGKVCL  291 (372)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~G~~v~  291 (372)
                      +++..........+...+-.++.
T Consensus        76 ~~~~~~~~~~~~~~~~~g~~~~~   98 (118)
T 3ic5_A           76 AAPFFLTPIIAKAAKAAGAHYFD   98 (118)
T ss_dssp             CSCGGGHHHHHHHHHHTTCEEEC
T ss_pred             CCCchhhHHHHHHHHHhCCCEEE
Confidence            99865333333334444444443

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.75  E-value=0.0002  Score=66.65  Aligned_cols=104  Identities=18%  Similarity=0.267  Sum_probs=77.8

Q ss_pred             HHHHHHHh--cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHH
Q 017426          177 VGVHACRR--ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       177 ~a~~~l~~--~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~  254 (372)
                      ..+.++.+  ...-.|++++|.|.|.+|..+++.++.+|+ .|+++++++.+...+...|... .       +    +.+
T Consensus       205 s~~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~v-~-------~----Lee  271 (435)
T 3gvp_A          205 SILDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQACMDGFRL-V-------K----LNE  271 (435)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-C-------C----HHH
T ss_pred             HHHHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHHHcCCEe-c-------c----HHH
Confidence            45556644  234589999999999999999999999999 6899999888777666677532 1       2    222


Q ss_pred             HHHHcCCcceEEEeCCCcHHHHH-HHHHHhccCCEEEEEcCCCC
Q 017426          255 IQKAMGTGIDVSFDCAGLNKTMS-TALGATCAGGKVCLVGMGHH  297 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~  297 (372)
                      .    -...|+++.|.|....+. ..+..|++++.++.++....
T Consensus       272 a----l~~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~~  311 (435)
T 3gvp_A          272 V----IRQVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNT  311 (435)
T ss_dssp             H----TTTCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTTT
T ss_pred             H----HhcCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCCc
Confidence            2    257899999987654444 78889999998888876543

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.74  E-value=5.4e-05  Score=60.92  Aligned_cols=91  Identities=18%  Similarity=0.184  Sum_probs=63.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-HhCCCeEEecCCCcccHHHHHHHHHHHcCCcceE
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~  265 (372)
                      ..++.+|+|+|+|.+|+.+++.++..|. .|+++++++++.+.++ ..|... +..+.  .+ .+.+.+.   ...++|+
T Consensus        16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~-~~~d~--~~-~~~l~~~---~~~~ad~   87 (155)
T 2g1u_A           16 KQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFT-VVGDA--AE-FETLKEC---GMEKADM   87 (155)
T ss_dssp             -CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEE-EESCT--TS-HHHHHTT---TGGGCSE
T ss_pred             ccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcE-EEecC--CC-HHHHHHc---CcccCCE
Confidence            4578899999999999999999999998 6888889988887766 566543 22221  12 1222221   1357999


Q ss_pred             EEeCCCcHHHHHHHHHHhcc
Q 017426          266 SFDCAGLNKTMSTALGATCA  285 (372)
Q Consensus       266 vid~~g~~~~~~~~~~~l~~  285 (372)
                      ||.+++.......+...++.
T Consensus        88 Vi~~~~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           88 VFAFTNDDSTNFFISMNARY  107 (155)
T ss_dssp             EEECSSCHHHHHHHHHHHHH
T ss_pred             EEEEeCCcHHHHHHHHHHHH
Confidence            99999987555555555554

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.73  E-value=0.00027  Score=63.26  Aligned_cols=111  Identities=15%  Similarity=0.168  Sum_probs=77.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      -.|.+|+|+|+|.+|+.+++.++.+|+ .|++.+++.++.+.++++|+..+ .+    .+    +.++    -...|+|+
T Consensus       153 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-~~----~~----l~~~----l~~aDvVi  218 (293)
T 3d4o_A          153 IHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGMEPF-HI----SK----AAQE----LRDVDVCI  218 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTSEEE-EG----GG----HHHH----TTTCSEEE
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCeec-Ch----hh----HHHH----hcCCCEEE
Confidence            368999999999999999999999999 68899999888777777886532 21    12    2222    25799999


Q ss_pred             eCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEE
Q 017426          268 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV  314 (372)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~  314 (372)
                      .+++....-...+..|++++.++.++..+....+  .....+.+.+.
T Consensus       219 ~~~p~~~i~~~~l~~mk~~~~lin~ar~~~~~~~--~~a~~~Gv~~~  263 (293)
T 3d4o_A          219 NTIPALVVTANVLAEMPSHTFVIDLASKPGGTDF--RYAEKRGIKAL  263 (293)
T ss_dssp             ECCSSCCBCHHHHHHSCTTCEEEECSSTTCSBCH--HHHHHHTCEEE
T ss_pred             ECCChHHhCHHHHHhcCCCCEEEEecCCCCCCCH--HHHHHCCCEEE
Confidence            9987531123567789999999988765444333  33333444443

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.59  E-value=0.00029  Score=62.36  Aligned_cols=105  Identities=23%  Similarity=0.263  Sum_probs=72.3

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHHh-----C--CCeEEecCCCcccHHHH
Q 017426          180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKEI-----G--ADNIVKVSTNLQDIAEE  251 (372)
Q Consensus       180 ~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~l-----g--~~~v~~~~~~~~~~~~~  251 (372)
                      ..+....++++++||-.|+| .|..+..+++..+ ...+++++.+++..+.+++.     |  ...+.....   |..+.
T Consensus        90 ~i~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~---d~~~~  165 (280)
T 1i9g_A           90 QIVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS---DLADS  165 (280)
T ss_dssp             HHHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS---CGGGC
T ss_pred             HHHHHcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEEC---chHhc
Confidence            34466778999999999987 6888889998753 34799999999888776653     4  332222111   11110


Q ss_pred             HHHHHHHcCCcceEEEeCCCcH-HHHHHHHHHhccCCEEEEEc
Q 017426          252 VEKIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g  293 (372)
                      .  +   ....+|+|+.....+ ..+..+.+.|+++|.++.+.
T Consensus       166 ~--~---~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~  203 (280)
T 1i9g_A          166 E--L---PDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  203 (280)
T ss_dssp             C--C---CTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             C--C---CCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence            0  0   135799998765544 57788999999999998864

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.54  E-value=0.00095  Score=58.83  Aligned_cols=104  Identities=29%  Similarity=0.354  Sum_probs=70.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCCCeE-EecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNI-VKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~~~v-~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      .|+.+||+|+ +++|.++++.+...|+ .|+++++++++.+ .++++|.... +..|-.+ .+..+.+.+..+. -+++|
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~-~G~iD  105 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAE-AGRID  105 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH-HSCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHH-cCCCC
Confidence            5788999987 9999999999999999 5888888888766 4467774332 2233222 3333334443332 36899


Q ss_pred             EEEeCCCcH----------H---------------HHHHHHHHhccCCEEEEEcC
Q 017426          265 VSFDCAGLN----------K---------------TMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       265 ~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~  294 (372)
                      +++++.|..          +               ..+.+++.|+.+|+++.++.
T Consensus       106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS  160 (273)
T 4fgs_A          106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGS  160 (273)
T ss_dssp             EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECC
T ss_pred             EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEee
Confidence            999988753          1               23345556777899888763

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.51  E-value=0.00051  Score=61.63  Aligned_cols=111  Identities=14%  Similarity=0.141  Sum_probs=77.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      -.|.+++|+|+|.+|+.+++.++.+|+ .|++.+++.++.+.+.++|... +.+    .+    +.++    -...|+|+
T Consensus       155 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~-~~~----~~----l~~~----l~~aDvVi  220 (300)
T 2rir_A          155 IHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLVP-FHT----DE----LKEH----VKDIDICI  220 (300)
T ss_dssp             STTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCEE-EEG----GG----HHHH----STTCSEEE
T ss_pred             CCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCeE-Ech----hh----HHHH----hhCCCEEE
Confidence            368899999999999999999999999 6889999888877777777642 221    12    2222    25799999


Q ss_pred             eCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEE
Q 017426          268 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV  314 (372)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~  314 (372)
                      .+++....-...+..|++++.++.++..+....+  .....+...+.
T Consensus       221 ~~~p~~~i~~~~~~~mk~g~~lin~a~g~~~~~~--~~a~~~G~~~i  265 (300)
T 2rir_A          221 NTIPSMILNQTVLSSMTPKTLILDLASRPGGTDF--KYAEKQGIKAL  265 (300)
T ss_dssp             ECCSSCCBCHHHHTTSCTTCEEEECSSTTCSBCH--HHHHHHTCEEE
T ss_pred             ECCChhhhCHHHHHhCCCCCEEEEEeCCCCCcCH--HHHHHCCCEEE
Confidence            9988531113466788999999888765444333  33333444443

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.48  E-value=0.0007  Score=55.84  Aligned_cols=95  Identities=19%  Similarity=0.174  Sum_probs=64.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      +++|+|+|+|.+|..+++.++.. |. .|+++++++++.+.+++.|...+. -+..+.   +.+.+.  +.-.++|++|.
T Consensus        39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~-gd~~~~---~~l~~~--~~~~~ad~vi~  111 (183)
T 3c85_A           39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVIS-GDATDP---DFWERI--LDTGHVKLVLL  111 (183)
T ss_dssp             TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEE-CCTTCH---HHHHTB--CSCCCCCEEEE
T ss_pred             CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEE-cCCCCH---HHHHhc--cCCCCCCEEEE
Confidence            67899999999999999999998 98 488889999999888888876443 122111   122211  02357999999


Q ss_pred             CCCcHHHHHHHHHHh---ccCCEEEE
Q 017426          269 CAGLNKTMSTALGAT---CAGGKVCL  291 (372)
Q Consensus       269 ~~g~~~~~~~~~~~l---~~~G~~v~  291 (372)
                      +++...........+   .+..+++.
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~ii~  137 (183)
T 3c85_A          112 AMPHHQGNQTALEQLQRRNYKGQIAA  137 (183)
T ss_dssp             CCSSHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             eCCChHHHHHHHHHHHHHCCCCEEEE
Confidence            999764444443343   34445554

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.35  E-value=0.0029  Score=49.63  Aligned_cols=94  Identities=11%  Similarity=0.062  Sum_probs=65.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      .++|+|.|+|.+|+.+++.++..|. .|++++.++++.+.+++.|...+. -+..+++   .+++.   +-..+|+++-+
T Consensus         7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~-gd~~~~~---~l~~a---~i~~ad~vi~~   78 (140)
T 3fwz_A            7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVL-GNAANEE---IMQLA---HLECAKWLILT   78 (140)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEE-SCTTSHH---HHHHT---TGGGCSEEEEC
T ss_pred             CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEE-CCCCCHH---HHHhc---CcccCCEEEEE
Confidence            4689999999999999999999999 588999999999998888875432 2222222   23221   23579999999


Q ss_pred             CCcHHHHH---HHHHHhccCCEEEE
Q 017426          270 AGLNKTMS---TALGATCAGGKVCL  291 (372)
Q Consensus       270 ~g~~~~~~---~~~~~l~~~G~~v~  291 (372)
                      ++....-.   ...+.+.+..+++.
T Consensus        79 ~~~~~~n~~~~~~a~~~~~~~~iia  103 (140)
T 3fwz_A           79 IPNGYEAGEIVASARAKNPDIEIIA  103 (140)
T ss_dssp             CSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred             CCChHHHHHHHHHHHHHCCCCeEEE
Confidence            98754222   23444556666554

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.33  E-value=0.0017  Score=60.59  Aligned_cols=102  Identities=18%  Similarity=0.169  Sum_probs=75.3

Q ss_pred             HHHHHHh--cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHH
Q 017426          178 GVHACRR--ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI  255 (372)
Q Consensus       178 a~~~l~~--~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~  255 (372)
                      .+.++.+  ...-.|++++|.|.|.+|+.+++.++.+|+ +|++++.++.+...+...|... .       ++    .++
T Consensus       233 lvdgI~Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~v-v-------~L----eEl  299 (464)
T 3n58_A          233 LVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFEV-V-------TL----DDA  299 (464)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEE-C-------CH----HHH
T ss_pred             HHHHHHHhcCCcccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCcee-c-------cH----HHH
Confidence            4555544  335689999999999999999999999999 6899988887766666666532 1       12    222


Q ss_pred             HHHcCCcceEEEeCCCcHHHH-HHHHHHhccCCEEEEEcCCC
Q 017426          256 QKAMGTGIDVSFDCAGLNKTM-STALGATCAGGKVCLVGMGH  296 (372)
Q Consensus       256 ~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~  296 (372)
                      .    ...|+|+.+.+....+ ...+..|+++..++.++...
T Consensus       300 L----~~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRgd  337 (464)
T 3n58_A          300 A----STADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFD  337 (464)
T ss_dssp             G----GGCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSST
T ss_pred             H----hhCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCCC
Confidence            2    4689999998865333 47788999999888877544

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.33  E-value=0.0019  Score=54.04  Aligned_cols=105  Identities=16%  Similarity=0.164  Sum_probs=72.6

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHH
Q 017426          180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKI  255 (372)
Q Consensus       180 ~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~  255 (372)
                      ..+....++++++||-.|+|. |..++.+++......+++++.+++..+.+++    .+.+.+.....   +..+.+.  
T Consensus        31 ~~l~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~~~--  104 (204)
T 3e05_A           31 VTLSKLRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEA---FAPEGLD--  104 (204)
T ss_dssp             HHHHHTTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEEC---CTTTTCT--
T ss_pred             HHHHHcCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeC---Chhhhhh--
Confidence            345667889999999999874 8888899988654589999999998877654    35433221111   1111110  


Q ss_pred             HHHcCCcceEEEeCCC---cHHHHHHHHHHhccCCEEEEEc
Q 017426          256 QKAMGTGIDVSFDCAG---LNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       256 ~~~~~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                         ....+|+|+....   ....+..+.+.|+++|+++...
T Consensus       105 ---~~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  142 (204)
T 3e05_A          105 ---DLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNA  142 (204)
T ss_dssp             ---TSCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred             ---cCCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence               1256999997654   2457788999999999998864

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.32  E-value=0.0018  Score=54.42  Aligned_cols=105  Identities=12%  Similarity=0.095  Sum_probs=71.3

Q ss_pred             HHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCC-eEEecCCCcccHHHHHH
Q 017426          179 VHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD-NIVKVSTNLQDIAEEVE  253 (372)
Q Consensus       179 ~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~~~  253 (372)
                      ...+....++++++||-.|+|. |..++.+++. +. .|++++.+++..+.+++    +|.. .+.....+..+   .+.
T Consensus        45 ~~~l~~l~~~~~~~vLDlGcG~-G~~~~~la~~-~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~---~~~  118 (204)
T 3njr_A           45 ALTLAALAPRRGELLWDIGGGS-GSVSVEWCLA-GG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPA---ALA  118 (204)
T ss_dssp             HHHHHHHCCCTTCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTG---GGT
T ss_pred             HHHHHhcCCCCCCEEEEecCCC-CHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhh---hcc
Confidence            3345667788999999999875 8888888888 66 79999999998877654    4554 22221111111   111


Q ss_pred             HHHHHcCCcceEEEeCCCc-HHHHHHHHHHhccCCEEEEEcC
Q 017426          254 KIQKAMGTGIDVSFDCAGL-NKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       254 ~~~~~~~~~~d~vid~~g~-~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                           ....+|+|+...+. ...+..+.+.|+++|+++....
T Consensus       119 -----~~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  155 (204)
T 3njr_A          119 -----DLPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAV  155 (204)
T ss_dssp             -----TSCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEEC
T ss_pred             -----cCCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEec
Confidence                 12479999965433 2267888999999999987643

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.31  E-value=0.0018  Score=56.42  Aligned_cols=82  Identities=17%  Similarity=0.228  Sum_probs=54.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+.+++++++.+.+ ++++... .+..|-.+ .+..+.+.+..+ ..+++|
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-~~g~id   84 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQ-TLGAID   84 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHH-HHSSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHH-HhCCCC
Confidence            4789999987 9999999999999999 578888888776544 4455322 22233222 223333333322 235899


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      +++++.|.
T Consensus        85 ~lv~nAg~   92 (255)
T 4eso_A           85 LLHINAGV   92 (255)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998764

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.28  E-value=0.00042  Score=65.63  Aligned_cols=91  Identities=18%  Similarity=0.249  Sum_probs=69.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      -.|++++|+|+|.+|.++++.++..|+ .|+++++++.+.+.+...+++. ...    .+           ....+|+++
T Consensus       263 L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~g~dv-~~l----ee-----------~~~~aDvVi  325 (488)
T 3ond_A          263 IAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQATMEGLQV-LTL----ED-----------VVSEADIFV  325 (488)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-CCG----GG-----------TTTTCSEEE
T ss_pred             ccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhCCcc-CCH----HH-----------HHHhcCEEE
Confidence            478999999999999999999999999 6888999988887777777532 111    11           135799999


Q ss_pred             eCCCcHHHHH-HHHHHhccCCEEEEEcCC
Q 017426          268 DCAGLNKTMS-TALGATCAGGKVCLVGMG  295 (372)
Q Consensus       268 d~~g~~~~~~-~~~~~l~~~G~~v~~g~~  295 (372)
                      ++.|....+. ..+..+++++.++..|..
T Consensus       326 ~atG~~~vl~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          326 TTTGNKDIIMLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             ECSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred             eCCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence            9988654443 377888988888887754

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.19  E-value=0.0049  Score=54.89  Aligned_cols=104  Identities=20%  Similarity=0.180  Sum_probs=65.8

Q ss_pred             CCCEEEEECC-CH--HHHHHHHHHHHcCCCeEEEEecChhHHHHH----HHhCCCeEEecCCCcc-cHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GP--IGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQ-DIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~--~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~----~~lg~~~v~~~~~~~~-~~~~~~~~~~~~~~  260 (372)
                      .|.++||+|+ |.  +|.++++.+...|+ .|+++.++++..+.+    ++.+....+..|-.+. +..+.+.++.+ ..
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~-~~  107 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEK-KW  107 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHH-HT
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHH-hc
Confidence            5789999987 66  99999999999999 577777776543333    3345333333333322 33334444333 24


Q ss_pred             CcceEEEeCCCcH--------------H---------------HHHHHHHHhccCCEEEEEcC
Q 017426          261 TGIDVSFDCAGLN--------------K---------------TMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       261 ~~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~  294 (372)
                      +++|++|++.|..              +               ..+.++..+..+|+++.++.
T Consensus       108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS  170 (293)
T 3grk_A          108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY  170 (293)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred             CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence            5899999988742              1               22335556667899998864

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.17  E-value=0.0011  Score=60.38  Aligned_cols=110  Identities=19%  Similarity=0.215  Sum_probs=69.0

Q ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHHHh----C-----------CCeEEec
Q 017426          178 GVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEI----G-----------ADNIVKV  241 (372)
Q Consensus       178 a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~~l----g-----------~~~v~~~  241 (372)
                      +...+....+++|++||-.|+|. |..++.+++..|. ..|++++.+++..+.+++.    +           ...+...
T Consensus        94 ~~~~l~~l~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~  172 (336)
T 2b25_A           94 INMILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFI  172 (336)
T ss_dssp             HHHHHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEE
T ss_pred             HHHHHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEE
Confidence            33345556789999999999865 7888888888764 4799999999887776552    1           1122111


Q ss_pred             CCCcccHHHHHHHHHHHcCCcceEEEeCCCcH-HHHHHHHHHhccCCEEEEEcC
Q 017426          242 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      ..+-.+.   ...+.   .+.+|+|+-....+ ..+..+.+.|+++|.++.+..
T Consensus       173 ~~d~~~~---~~~~~---~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  220 (336)
T 2b25_A          173 HKDISGA---TEDIK---SLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  220 (336)
T ss_dssp             ESCTTCC---C----------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             ECChHHc---ccccC---CCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            1111111   11111   24699998654433 357788999999999987643

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=97.15  E-value=0.00072  Score=58.19  Aligned_cols=106  Identities=21%  Similarity=0.207  Sum_probs=71.3

Q ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHH
Q 017426          178 GVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVE  253 (372)
Q Consensus       178 a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~  253 (372)
                      +..+++...++++++||..|+| .|..+..+++..+ ..+++++.+++..+.+++    .+...+....   .+....  
T Consensus        80 ~~~~~~~l~~~~~~~vLdiG~G-~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~---~d~~~~--  152 (235)
T 1jg1_A           80 VAIMLEIANLKPGMNILEVGTG-SGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVIL---GDGSKG--  152 (235)
T ss_dssp             HHHHHHHHTCCTTCCEEEECCT-TSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEE---SCGGGC--
T ss_pred             HHHHHHhcCCCCCCEEEEEeCC-cCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEE---CCcccC--
Confidence            3344555678899999999987 6888999999887 479999999988777655    4443322111   111000  


Q ss_pred             HHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEc
Q 017426          254 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       254 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                       +.  ...++|+|+.+.........+.+.|+++|+++..-
T Consensus       153 -~~--~~~~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~  189 (235)
T 1jg1_A          153 -FP--PKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPV  189 (235)
T ss_dssp             -CG--GGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             -CC--CCCCccEEEECCcHHHHHHHHHHhcCCCcEEEEEE
Confidence             10  13469999976654434467888999999987653

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.14  E-value=0.0043  Score=54.46  Aligned_cols=105  Identities=15%  Similarity=0.176  Sum_probs=62.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH----HHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ +++|.++++.+...|+++++...+++++.+.+    +..+... .+..|-.+ ++..+.+.++.+. .+
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g  104 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA-FG  104 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            5789999987 99999999998889995444335555444432    2334332 22233222 2333334433332 35


Q ss_pred             cceEEEeCCCcH----------H---------------HHHHHHHHhccCCEEEEEcC
Q 017426          262 GIDVSFDCAGLN----------K---------------TMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       262 ~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~  294 (372)
                      ++|++|++.|..          +               ..+.++..++.+|+++.++.
T Consensus       105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS  162 (267)
T 3u5t_A          105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST  162 (267)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence            899999988742          1               12345556667789888864

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.12  E-value=0.0043  Score=48.57  Aligned_cols=76  Identities=12%  Similarity=0.203  Sum_probs=56.3

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      ..+++|.|+|.+|..+++.+...|. .|++++.++++.+.+++.+...+ ..+..++   +.+++.   .-.++|++|.+
T Consensus         6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~~~-~gd~~~~---~~l~~~---~~~~~d~vi~~   77 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFDAV-IADPTDE---SFYRSL---DLEGVSAVLIT   77 (141)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEE-ECCTTCH---HHHHHS---CCTTCSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCcEE-ECCCCCH---HHHHhC---CcccCCEEEEe
Confidence            4689999999999999999999999 58888999999988888776433 2232222   223222   23579999999


Q ss_pred             CCcH
Q 017426          270 AGLN  273 (372)
Q Consensus       270 ~g~~  273 (372)
                      ++..
T Consensus        78 ~~~~   81 (141)
T 3llv_A           78 GSDD   81 (141)
T ss_dssp             CSCH
T ss_pred             cCCH
Confidence            9965

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.11  E-value=0.0059  Score=53.37  Aligned_cols=82  Identities=16%  Similarity=0.204  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-CH--HHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCC--CeEEecCCCc-ccHHHHHHHHHHH
Q 017426          189 PETNVLIMGA-GP--IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGA--DNIVKVSTNL-QDIAEEVEKIQKA  258 (372)
Q Consensus       189 ~g~~vlI~Ga-g~--~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~--~~v~~~~~~~-~~~~~~~~~~~~~  258 (372)
                      .|.++||+|+ |.  +|.++++.+...|+ .|++++++++..+.+++    ++.  ...+..|-.+ .+..+.+.++.+.
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ   84 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            4678999987 66  99999999989999 57777777655444433    332  2233333222 3344444444332


Q ss_pred             cCCcceEEEeCCCc
Q 017426          259 MGTGIDVSFDCAGL  272 (372)
Q Consensus       259 ~~~~~d~vid~~g~  272 (372)
                       .+++|+++++.|.
T Consensus        85 -~g~id~li~~Ag~   97 (266)
T 3oig_A           85 -VGVIHGIAHCIAF   97 (266)
T ss_dssp             -HSCCCEEEECCCC
T ss_pred             -hCCeeEEEEcccc
Confidence             3589999998763

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.08  E-value=0.0064  Score=53.38  Aligned_cols=105  Identities=17%  Similarity=0.270  Sum_probs=64.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE-ecChhHHHH----HHHhCCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSV----AKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v-~~~~~~~~~----~~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .|.++||+|+ +++|.++++.+...|++ |+++ .+++++.+.    +++.+... .+..|-.+ ++..+.+.+..+. .
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   94 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAK-VVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH-F   94 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4678999987 99999999999999995 5554 444444332    23345332 22233222 2333444444332 3


Q ss_pred             CcceEEEeCCCcH----------H---------------HHHHHHHHhccCCEEEEEcCC
Q 017426          261 TGIDVSFDCAGLN----------K---------------TMSTALGATCAGGKVCLVGMG  295 (372)
Q Consensus       261 ~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~  295 (372)
                      +++|++|++.|..          +               ..+.++..+..+|+++.++..
T Consensus        95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~  154 (270)
T 3is3_A           95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSN  154 (270)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc
Confidence            5799999988741          1               233456667778999988753

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.08  E-value=0.0079  Score=52.41  Aligned_cols=81  Identities=15%  Similarity=0.253  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCeEEEEecChhHHHHHH----HhCCC--eEEecCCC-cccHHHHHHHHHHH
Q 017426          189 PETNVLIMGA-G--PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGAD--NIVKVSTN-LQDIAEEVEKIQKA  258 (372)
Q Consensus       189 ~g~~vlI~Ga-g--~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~----~lg~~--~v~~~~~~-~~~~~~~~~~~~~~  258 (372)
                      .|+++||+|+ |  ++|.++++.+...|+ +|+.++++++..+.+.    +++..  ..+..|-. .++..+.+.+..+.
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD   83 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4789999997 5  799999999999999 5788888876554433    34432  22333322 23333444443332


Q ss_pred             cCCcceEEEeCCC
Q 017426          259 MGTGIDVSFDCAG  271 (372)
Q Consensus       259 ~~~~~d~vid~~g  271 (372)
                       -+++|+++++.|
T Consensus        84 -~G~iD~lvnnAg   95 (256)
T 4fs3_A           84 -VGNIDGVYHSIA   95 (256)
T ss_dssp             -HCCCSEEEECCC
T ss_pred             -hCCCCEEEeccc
Confidence             368999999876

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.07  E-value=0.0093  Score=52.41  Aligned_cols=104  Identities=16%  Similarity=0.277  Sum_probs=64.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE-ecChhHHHH----HHHhCCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSV----AKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v-~~~~~~~~~----~~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .|.++||+|+ +++|.++++.+...|++ |+++ .+++++.+.    +++.+... .+..|-.+ ++..+.+.+..+. .
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~  107 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAA-VALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA-L  107 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            5789999987 99999999999999995 5555 444444332    23335332 22233222 2333444444332 3


Q ss_pred             CcceEEEeCCCcH----------H---------------HHHHHHHHhccCCEEEEEcC
Q 017426          261 TGIDVSFDCAGLN----------K---------------TMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       261 ~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~  294 (372)
                      +++|++|++.|..          +               ..+.+...|+.+|+++.++.
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS  166 (271)
T 3v2g_A          108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS  166 (271)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence            5899999988741          1               23345556677899998864

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.06  E-value=0.0043  Score=54.01  Aligned_cols=81  Identities=25%  Similarity=0.258  Sum_probs=54.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCc-ccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+..++++. ..+..|-.+ +++.+.+.+..+. .+++|++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~-~g~iD~l   81 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYA-LGRVDVL   81 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHH-HSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            3678999998 9999999999999998 57777777766555556643 444333322 2333444443322 3589999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      |++.|.
T Consensus        82 v~~Ag~   87 (256)
T 2d1y_A           82 VNNAAI   87 (256)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            998873

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.05  E-value=0.0074  Score=50.84  Aligned_cols=91  Identities=14%  Similarity=0.249  Sum_probs=61.1

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCC
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  270 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  270 (372)
                      +|||+|+ |.+|..+++.+...|. .|+++.+++++.+.+. -+.. ++..|-.+.+.    ..+     .++|+||.+.
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~~-~~~~D~~d~~~----~~~-----~~~d~vi~~a   69 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-KDIN-ILQKDIFDLTL----SDL-----SDQNVVVDAY   69 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-SSSE-EEECCGGGCCH----HHH-----TTCSEEEECC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-CCCe-EEeccccChhh----hhh-----cCCCEEEECC
Confidence            6899998 9999999999999998 5778878877765443 2332 33333222222    222     5799999998


Q ss_pred             CcH--------HHHHHHHHHhccC--CEEEEEcC
Q 017426          271 GLN--------KTMSTALGATCAG--GKVCLVGM  294 (372)
Q Consensus       271 g~~--------~~~~~~~~~l~~~--G~~v~~g~  294 (372)
                      |..        .....+++.++..  ++++.++.
T Consensus        70 g~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS  103 (221)
T 3ew7_A           70 GISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG  103 (221)
T ss_dssp             CSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred             cCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence            763        2345566666654  68887763

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.03  E-value=0.0097  Score=51.79  Aligned_cols=82  Identities=22%  Similarity=0.330  Sum_probs=54.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH----HHHhCCCeE-EecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV----AKEIGADNI-VKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~----~~~lg~~~v-~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .|+.+||+|+ +++|.+.++.+...|+ +|+.+++++++.+.    +++.|.... +..|-.+ ++..+.+.+..+ ..+
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~-~~G   85 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDA-EGI   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH-TTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH-HCC
Confidence            4788999987 9999999999999999 68888888776543    233454332 2222222 333344444433 356


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|+++++.|.
T Consensus        86 ~iDiLVNNAG~   96 (255)
T 4g81_D           86 HVDILINNAGI   96 (255)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            89999998875

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.02  E-value=0.0028  Score=51.53  Aligned_cols=105  Identities=17%  Similarity=0.223  Sum_probs=71.7

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCC-eEEecCCCcccHHHHHHHH
Q 017426          181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD-NIVKVSTNLQDIAEEVEKI  255 (372)
Q Consensus       181 ~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~~~~~  255 (372)
                      .+....++++++||-.|+|. |..+..+++..+...+++++.+++..+.+++    .+.. .+....+....    +.  
T Consensus        17 ~~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~----~~--   89 (178)
T 3hm2_A           17 AISALAPKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRA----FD--   89 (178)
T ss_dssp             HHHHHCCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGG----GG--
T ss_pred             HHHHhcccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhh----hh--
Confidence            34556778999999999875 8888999888754579999999988887764    3544 33211111111    11  


Q ss_pred             HHHcCCcceEEEeCCCc--HHHHHHHHHHhccCCEEEEEcC
Q 017426          256 QKAMGTGIDVSFDCAGL--NKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       256 ~~~~~~~~d~vid~~g~--~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                        .....+|+|+.....  ...+..+.+.|+++|+++....
T Consensus        90 --~~~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  128 (178)
T 3hm2_A           90 --DVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAV  128 (178)
T ss_dssp             --GCCSCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred             --ccCCCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence              012679999965432  2478889999999999987643

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=97.02  E-value=0.0039  Score=54.13  Aligned_cols=105  Identities=18%  Similarity=0.105  Sum_probs=73.4

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHHh-----CCCeEEecCCCcccHHHHHH
Q 017426          180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKEI-----GADNIVKVSTNLQDIAEEVE  253 (372)
Q Consensus       180 ~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~l-----g~~~v~~~~~~~~~~~~~~~  253 (372)
                      ..+....++++++||-.|+|. |..+..+++..| ...+++++.+++..+.+++.     |...+.....   |+.+.  
T Consensus        87 ~~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~---d~~~~--  160 (258)
T 2pwy_A           87 AMVTLLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLG---KLEEA--  160 (258)
T ss_dssp             HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEES---CGGGC--
T ss_pred             HHHHHcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEEC---chhhc--
Confidence            345667789999999999875 888889998864 34799999999988877654     5333221111   11110  


Q ss_pred             HHHHHcCCcceEEEeCCCcH-HHHHHHHHHhccCCEEEEEc
Q 017426          254 KIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       254 ~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g  293 (372)
                      .+   ..+.+|+|+.....+ ..+..+.+.|+++|+++.+.
T Consensus       161 ~~---~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  198 (258)
T 2pwy_A          161 EL---EEAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYL  198 (258)
T ss_dssp             CC---CTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CC---CCCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence            00   135799999766554 57888999999999998874

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=97.01  E-value=0.0028  Score=52.52  Aligned_cols=102  Identities=18%  Similarity=0.212  Sum_probs=64.4

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCC---------CeEEEEecChhHHHHHHHhCCCeEE-ecCCCcccHHHHHHH
Q 017426          185 ANIGPETNVLIMGAGPIGLVTMLAARAFGA---------PRIVIVDVDDYRLSVAKEIGADNIV-KVSTNLQDIAEEVEK  254 (372)
Q Consensus       185 ~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~---------~~vv~v~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~~~  254 (372)
                      ..++++++||.+|+|. |..+..+++..|.         ..|++++.++.+.     +.....+ ..+-...++.+.+.+
T Consensus        18 ~~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~~~~~~~~~~~~   91 (196)
T 2nyu_A           18 QILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADVTDPRTSQRILE   91 (196)
T ss_dssp             CCCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCTTSHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccCCCHHHHHHHHH
Confidence            3478999999999977 8899999999874         4799999887431     1111222 211112222222222


Q ss_pred             HHHHcCCcceEEEe-----CCCcH------------HHHHHHHHHhccCCEEEEEcC
Q 017426          255 IQKAMGTGIDVSFD-----CAGLN------------KTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       255 ~~~~~~~~~d~vid-----~~g~~------------~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      ..  .+..+|+|+.     +.+..            ..+..+.+.|+++|+++....
T Consensus        92 ~~--~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  146 (196)
T 2nyu_A           92 VL--PGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW  146 (196)
T ss_dssp             HS--GGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             hc--CCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence            21  2347999994     33332            356678889999999987643

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.00  E-value=0.0029  Score=58.97  Aligned_cols=101  Identities=22%  Similarity=0.283  Sum_probs=72.8

Q ss_pred             HHHHHHHh--cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHH
Q 017426          177 VGVHACRR--ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       177 ~a~~~l~~--~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~  254 (372)
                      ..+.++.+  ...-.|.+|.|.|.|.+|..+++.++.+|+ .|+++++++.+...+...|....        +    +.+
T Consensus       196 slldgi~ratg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p~~a~~A~~~G~~~~--------s----L~e  262 (436)
T 3h9u_A          196 SLVDGIKRATDVMIAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDPINALQAAMEGYQVL--------L----VED  262 (436)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC--------C----HHH
T ss_pred             HHHHHHHHhcCCcccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCChhhhHHHHHhCCeec--------C----HHH
Confidence            34455533  333468999999999999999999999999 68999999888777777775321        2    222


Q ss_pred             HHHHcCCcceEEEeCCCcHHHHH-HHHHHhccCCEEEEEcC
Q 017426          255 IQKAMGTGIDVSFDCAGLNKTMS-TALGATCAGGKVCLVGM  294 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~  294 (372)
                      .    -...|+++.+.+....+. ..+..|+++..++.++.
T Consensus       263 a----l~~ADVVilt~gt~~iI~~e~l~~MK~gAIVINvgR  299 (436)
T 3h9u_A          263 V----VEEAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGH  299 (436)
T ss_dssp             H----TTTCSEEEECSSCSCSBCTTTGGGCCTTEEEEECSS
T ss_pred             H----HhhCCEEEECCCCcCccCHHHHhhcCCCcEEEEeCC
Confidence            2    257899998877543333 56777888887777763

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.99  E-value=0.0064  Score=52.73  Aligned_cols=82  Identities=20%  Similarity=0.280  Sum_probs=53.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-Hh-----C--CCeEEecCCCc-ccHHHHHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EI-----G--ADNIVKVSTNL-QDIAEEVEKIQKA  258 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~l-----g--~~~v~~~~~~~-~~~~~~~~~~~~~  258 (372)
                      .+.++||+|+ +++|.++++.+...|+ .|+.+++++++.+.+. ++     +  ....+..|-.+ ++..+.+.++.+.
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            4678999987 9999999999988999 5788888887655432 22     2  22233333222 2333344443332


Q ss_pred             cCCcceEEEeCCCc
Q 017426          259 MGTGIDVSFDCAGL  272 (372)
Q Consensus       259 ~~~~~d~vid~~g~  272 (372)
                       .+++|++|++.|.
T Consensus        85 -~g~iD~lvnnAg~   97 (250)
T 3nyw_A           85 -YGAVDILVNAAAM   97 (250)
T ss_dssp             -HCCEEEEEECCCC
T ss_pred             -cCCCCEEEECCCc
Confidence             3589999999874

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=96.94  E-value=0.01  Score=52.77  Aligned_cols=81  Identities=20%  Similarity=0.229  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChh-HHHH----HHHhCCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY-RLSV----AKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~-~~~~----~~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|++++++++ ..+.    +++.+... .+..|-.+ .+..+.+.+..+. .
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~  123 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ-L  123 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            4789999987 9999999999999999 4666666554 2222    23344332 22223222 2333344443332 3


Q ss_pred             CcceEEEeCCC
Q 017426          261 TGIDVSFDCAG  271 (372)
Q Consensus       261 ~~~d~vid~~g  271 (372)
                      +++|++|++.|
T Consensus       124 g~iD~lvnnAg  134 (291)
T 3ijr_A          124 GSLNILVNNVA  134 (291)
T ss_dssp             SSCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            58999999866

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=96.94  E-value=0.0062  Score=52.74  Aligned_cols=80  Identities=19%  Similarity=0.160  Sum_probs=54.6

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCCcceEEE
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      ++|||+|+ +++|.++++.+...|+ +|+.+++++++.+.+.+-+... .+..|-.+ .+..+.+.+..+. -+++|+++
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~-~g~iDiLV   80 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEK-LQRIDVLV   80 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHH-HSCCCEEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHH-cCCCCEEE
Confidence            68999987 9999999999999999 6888889888877665544332 22233222 3333334333332 36899999


Q ss_pred             eCCCc
Q 017426          268 DCAGL  272 (372)
Q Consensus       268 d~~g~  272 (372)
                      ++.|.
T Consensus        81 NNAG~   85 (247)
T 3ged_A           81 NNACR   85 (247)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            98864

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=96.94  E-value=0.0031  Score=54.02  Aligned_cols=97  Identities=19%  Similarity=0.183  Sum_probs=64.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      .+.+|||+|+ |.+|..+++.+...|. .|+++++++++.+.+...++..++..|-. ++    +.+.    -.++|+||
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-~~----~~~~----~~~~D~vi   89 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANLE-ED----FSHA----FASIDAVV   89 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCTT-SC----CGGG----GTTCSEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEcccH-HH----HHHH----HcCCCEEE
Confidence            4679999998 9999999999999998 68888888888877776666233333322 22    2222    25899999


Q ss_pred             eCCCcHH-------------HHHHHHHHhc--cCCEEEEEcCC
Q 017426          268 DCAGLNK-------------TMSTALGATC--AGGKVCLVGMG  295 (372)
Q Consensus       268 d~~g~~~-------------~~~~~~~~l~--~~G~~v~~g~~  295 (372)
                      ++.|...             ....+++.++  ..++++.++..
T Consensus        90 ~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~  132 (236)
T 3e8x_A           90 FAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSV  132 (236)
T ss_dssp             ECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCT
T ss_pred             ECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecC
Confidence            9987421             1223333333  23688887753

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=96.91  E-value=0.0016  Score=50.93  Aligned_cols=76  Identities=13%  Similarity=0.256  Sum_probs=52.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      +.+|+|+|+|.+|..+++.+...|.+ |+++++++++.+.+++.+.. ++..+..  + .+.+.+.   .-.++|+++.+
T Consensus         6 ~~~v~I~G~G~iG~~~a~~l~~~g~~-v~~~d~~~~~~~~~~~~~~~-~~~~d~~--~-~~~l~~~---~~~~~d~vi~~   77 (144)
T 2hmt_A            6 NKQFAVIGLGRFGGSIVKELHRMGHE-VLAVDINEEKVNAYASYATH-AVIANAT--E-ENELLSL---GIRNFEYVIVA   77 (144)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTCC-CEEEESCHHHHHTTTTTCSE-EEECCTT--C-HHHHHTT---TGGGCSEEEEC
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHhCCE-EEEeCCC--C-HHHHHhc---CCCCCCEEEEC
Confidence            56899999999999999999999985 77788888877766555543 2222221  2 1223221   12579999999


Q ss_pred             CCcH
Q 017426          270 AGLN  273 (372)
Q Consensus       270 ~g~~  273 (372)
                      ++..
T Consensus        78 ~~~~   81 (144)
T 2hmt_A           78 IGAN   81 (144)
T ss_dssp             CCSC
T ss_pred             CCCc
Confidence            9963

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.90  E-value=0.0019  Score=54.27  Aligned_cols=103  Identities=17%  Similarity=0.144  Sum_probs=68.8

Q ss_pred             HHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHH
Q 017426          179 VHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       179 ~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~  254 (372)
                      ...++...++++++||-.|+| .|..+..+++. +. .|++++.+++..+.+++    .+...+.....   +..+..  
T Consensus        67 ~~~~~~l~~~~~~~vLdiG~G-~G~~~~~la~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~~--  138 (210)
T 3lbf_A           67 ARMTELLELTPQSRVLEIGTG-SGYQTAILAHL-VQ-HVCSVERIKGLQWQARRRLKNLDLHNVSTRHG---DGWQGW--  138 (210)
T ss_dssp             HHHHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEES---CGGGCC--
T ss_pred             HHHHHhcCCCCCCEEEEEcCC-CCHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCceEEEEC---CcccCC--
Confidence            334566778899999999987 47888888887 55 79999999988877655    35433221111   111101  


Q ss_pred             HHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEE
Q 017426          255 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  292 (372)
                       .  ..+.||+|+...........+.+.|+++|+++..
T Consensus       139 -~--~~~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~  173 (210)
T 3lbf_A          139 -Q--ARAPFDAIIVTAAPPEIPTALMTQLDEGGILVLP  173 (210)
T ss_dssp             -G--GGCCEEEEEESSBCSSCCTHHHHTEEEEEEEEEE
T ss_pred             -c--cCCCccEEEEccchhhhhHHHHHhcccCcEEEEE
Confidence             0  1368999998654433345678899999998875

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.88  E-value=0.007  Score=52.58  Aligned_cols=81  Identities=15%  Similarity=0.157  Sum_probs=53.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HH---hCCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ +++|.++++.+...|+ .|+++++++++.+.+ ++   .+.. ..+..|-.+ .+..+.+.++.+ . +
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-~-g   82 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADA-H-A   82 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH-H-S
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHh-h-C
Confidence            4678999987 9999999999999999 578888887664433 23   2432 222233222 233344444443 3 6


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus        83 ~id~lv~nAg~   93 (252)
T 3h7a_A           83 PLEVTIFNVGA   93 (252)
T ss_dssp             CEEEEEECCCC
T ss_pred             CceEEEECCCc
Confidence            89999998874

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.88  E-value=0.0032  Score=52.71  Aligned_cols=134  Identities=16%  Similarity=0.213  Sum_probs=79.0

Q ss_pred             CcceeEEE-ecCCceEECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEec
Q 017426          144 GSLANQVV-HPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV  222 (372)
Q Consensus       144 g~~~e~~~-v~~~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~  222 (372)
                      ..|.+|.. .+....+.+++++++..... +........+.. .++++.+||-.|+|. |..+..+++ .+...+++++.
T Consensus        16 p~w~~~~~~~~~~~~~~~~~~~~f~~~~~-~~~~~~~~~l~~-~~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~v~~vD~   91 (205)
T 3grz_A           16 PEWEDYQPVFKDQEIIRLDPGLAFGTGNH-QTTQLAMLGIER-AMVKPLTVADVGTGS-GILAIAAHK-LGAKSVLATDI   91 (205)
T ss_dssp             ETTCCCCCSSTTCEEEEESCC-----CCH-HHHHHHHHHHHH-HCSSCCEEEEETCTT-SHHHHHHHH-TTCSEEEEEES
T ss_pred             ccccccccCCCCceeEEecCCcccCCCCC-ccHHHHHHHHHH-hccCCCEEEEECCCC-CHHHHHHHH-CCCCEEEEEEC
Confidence            45666666 66777888888776655421 111111222222 256889999999865 677777666 46668999999


Q ss_pred             ChhHHHHHHH----hCCC--eEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHH---HHHHHHHHhccCCEEEEEc
Q 017426          223 DDYRLSVAKE----IGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK---TMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       223 ~~~~~~~~~~----lg~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g  293 (372)
                      +++..+.+++    .+..  .++..+.  .++          ..+.+|+|+.......   .+..+.+.|+++|.++...
T Consensus        92 s~~~~~~a~~~~~~~~~~~v~~~~~d~--~~~----------~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  159 (205)
T 3grz_A           92 SDESMTAAEENAALNGIYDIALQKTSL--LAD----------VDGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSG  159 (205)
T ss_dssp             CHHHHHHHHHHHHHTTCCCCEEEESST--TTT----------CCSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEE
T ss_pred             CHHHHHHHHHHHHHcCCCceEEEeccc--ccc----------CCCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            9988777665    3433  2222111  110          1468999997654321   2344566788999988754

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.87  E-value=0.01  Score=51.73  Aligned_cols=82  Identities=27%  Similarity=0.329  Sum_probs=55.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|++++++.++.+. .++++... .+..|-.+ ++..+.+.+..+ ..+++|
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~~g~id   84 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVE-HAGGLD   84 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHH-HSSSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHH-HcCCCC
Confidence            4678999987 9999999999999999 57788888776554 45565432 22233222 233344444433 245899


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|++.|.
T Consensus        85 ~lv~~Ag~   92 (259)
T 4e6p_A           85 ILVNNAAL   92 (259)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99998874

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.86  E-value=0.0087  Score=52.03  Aligned_cols=81  Identities=25%  Similarity=0.318  Sum_probs=54.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH----HHhCCCeE-EecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADNI-VKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~----~~lg~~~v-~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      +|+.+||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|.... +..|-.+ ++..+.+.+..+. -+
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~-~G   83 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFET-YS   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            4788999987 9999999999999999 588888888775533    34454332 2233222 3333444443332 36


Q ss_pred             cceEEEeCCC
Q 017426          262 GIDVSFDCAG  271 (372)
Q Consensus       262 ~~d~vid~~g  271 (372)
                      ++|+++++.|
T Consensus        84 ~iDiLVNNAG   93 (254)
T 4fn4_A           84 RIDVLCNNAG   93 (254)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            8999999887

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.85  E-value=0.01  Score=51.27  Aligned_cols=81  Identities=26%  Similarity=0.304  Sum_probs=53.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCeEEecCCCc-ccHHHHHHHHHHHcCCcceE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~  265 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+.+ +++++ ..+..|-.+ +++.+.+.+..+. .+++|+
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~-~g~id~   80 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGA-HPVVMDVADPASVERGFAEALAH-LGRLDG   80 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTC-EEEECCTTCHHHHHHHHHHHHHH-HSSCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCC-EEEEecCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            3678999998 9999999999999999 577777887765543 44563 333333222 2333344433322 357999


Q ss_pred             EEeCCCc
Q 017426          266 SFDCAGL  272 (372)
Q Consensus       266 vid~~g~  272 (372)
                      +|++.|.
T Consensus        81 lvn~Ag~   87 (245)
T 1uls_A           81 VVHYAGI   87 (245)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9998873

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=96.85  E-value=0.014  Score=51.47  Aligned_cols=104  Identities=21%  Similarity=0.296  Sum_probs=62.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhH-HH----HHHHhCCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR-LS----VAKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~-~~----~~~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ |++|.++++.+...|+ .|+++.+++++ .+    .+++.+... .+..|-.+ +++.+.+.+..+. .
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~  105 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI-F  105 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4678999987 9999999999999999 46666666533 22    233345332 22223222 2333334333322 2


Q ss_pred             CcceEEEeCCCcH----------H---------------HHHHHHHHhccCCEEEEEcC
Q 017426          261 TGIDVSFDCAGLN----------K---------------TMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       261 ~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~  294 (372)
                      +++|++|++.|..          +               ..+.+.+.|+..|+++.++.
T Consensus       106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  164 (283)
T 1g0o_A          106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS  164 (283)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence            5799999988731          1               12334555556789998864

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=96.85  E-value=0.0076  Score=52.67  Aligned_cols=81  Identities=15%  Similarity=0.231  Sum_probs=48.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChh---HHH-HHHHh---CCCe-EEecCCCc-ccHHHHHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY---RLS-VAKEI---GADN-IVKVSTNL-QDIAEEVEKIQKA  258 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~---~~~-~~~~l---g~~~-v~~~~~~~-~~~~~~~~~~~~~  258 (372)
                      .+.++||+|+ +++|.++++.+...|+ .|+++.++..   +.+ ..+++   +... .+..|-.+ ++..+.+.+..+.
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   88 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE   88 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4678999987 9999999999999999 4666654433   222 22222   3222 22223222 2333334433332


Q ss_pred             cCCcceEEEeCCC
Q 017426          259 MGTGIDVSFDCAG  271 (372)
Q Consensus       259 ~~~~~d~vid~~g  271 (372)
                       .+++|++|++.|
T Consensus        89 -~g~iD~lvnnAg  100 (262)
T 3ksu_A           89 -FGKVDIAINTVG  100 (262)
T ss_dssp             -HCSEEEEEECCC
T ss_pred             -cCCCCEEEECCC
Confidence             358999999887

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.83  E-value=0.0074  Score=52.70  Aligned_cols=81  Identities=16%  Similarity=0.203  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhH-HHHHHHhCCCeEEecCCCc-ccHHHHHHHHHHHcCCcceE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR-LSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~-~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~  265 (372)
                      .+.++||+|+ +++|.++++.+...|++ |+++++++++ .+.+++.++.. +..|-.+ .+..+.+.++.+ ..+++|+
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~-~~~Dv~~~~~v~~~~~~~~~-~~g~iD~  102 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHR-VIISYRTEHASVTELRQAGAVA-LYGDFSCETGIMAFIDLLKT-QTSSLRA  102 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCC-EEEEESSCCHHHHHHHHHTCEE-EECCTTSHHHHHHHHHHHHH-HCSCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHhcCCeE-EECCCCCHHHHHHHHHHHHH-hcCCCCE
Confidence            3678999987 99999999999999995 6666666654 44556666433 3333322 233334444333 2468999


Q ss_pred             EEeCCCc
Q 017426          266 SFDCAGL  272 (372)
Q Consensus       266 vid~~g~  272 (372)
                      +|++.|.
T Consensus       103 lv~nAg~  109 (260)
T 3gem_A          103 VVHNASE  109 (260)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9998873

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.81  E-value=0.012  Score=50.63  Aligned_cols=78  Identities=24%  Similarity=0.264  Sum_probs=52.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      +.++||+|+ |.+|.++++.+...|+ .|+++++++++  ..+.++. ..+..|-.+.+..+.+.+..+. .+++|++|+
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~-~g~id~lv~   76 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSLGA-VPLPTDLEKDDPKGLVKRALEA-LGGLHVLVH   76 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHHTC-EEEECCTTTSCHHHHHHHHHHH-HTSCCEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhhCc-EEEecCCchHHHHHHHHHHHHH-cCCCCEEEE
Confidence            568999998 9999999999999998 57777777765  3445563 2333332224555555544332 257999999


Q ss_pred             CCCc
Q 017426          269 CAGL  272 (372)
Q Consensus       269 ~~g~  272 (372)
                      +.|.
T Consensus        77 ~Ag~   80 (239)
T 2ekp_A           77 AAAV   80 (239)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8773

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.78  E-value=0.0074  Score=52.54  Aligned_cols=81  Identities=27%  Similarity=0.300  Sum_probs=53.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ +++|.++++.+...|+ .|+++++++++.+.+ +++   +.. ..+..|-.+ ++..+.+.++.+. .+
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g   82 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEK-FG   82 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            4678999987 9999999999999999 578888888776544 333   222 122233222 2333344443332 35


Q ss_pred             cceEEEeCCC
Q 017426          262 GIDVSFDCAG  271 (372)
Q Consensus       262 ~~d~vid~~g  271 (372)
                      ++|++|++.|
T Consensus        83 ~id~lv~nAg   92 (257)
T 3imf_A           83 RIDILINNAA   92 (257)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            8999999887

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.77  E-value=0.003  Score=53.28  Aligned_cols=105  Identities=20%  Similarity=0.237  Sum_probs=70.8

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHH
Q 017426          180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       180 ~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~  254 (372)
                      ..++...++++++||.+|+| .|..+..+++..|. ..+++++.+++..+.+++    .+...+.....   +....+  
T Consensus        68 ~~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~~--  141 (215)
T 2yxe_A           68 MMCELLDLKPGMKVLEIGTG-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVG---DGTLGY--  141 (215)
T ss_dssp             HHHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEES---CGGGCC--
T ss_pred             HHHHhhCCCCCCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC---CcccCC--
Confidence            34566678899999999987 48888899988762 379999999988777654    34333221111   111101  


Q ss_pred             HHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEc
Q 017426          255 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                       .  ....+|+|+...........+.+.|+++|+++..-
T Consensus       142 -~--~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~  177 (215)
T 2yxe_A          142 -E--PLAPYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPV  177 (215)
T ss_dssp             -G--GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             -C--CCCCeeEEEECCchHHHHHHHHHHcCCCcEEEEEE
Confidence             0  13579999987554434467888999999988763

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.77  E-value=0.0072  Score=52.81  Aligned_cols=82  Identities=17%  Similarity=0.201  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCC--eEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD--NIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~--~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+++++++++.+.+ +++   +..  ..+..|-.+ .+..+.+.+..+. .
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   86 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE-F   86 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH-h
Confidence            4678999987 9999999999999999 578888888765533 332   311  222233222 2333333333332 3


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus        87 g~id~lvnnAg~   98 (262)
T 3pk0_A           87 GGIDVVCANAGV   98 (262)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            589999998873

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=96.77  E-value=0.0075  Score=53.82  Aligned_cols=82  Identities=12%  Similarity=0.148  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHh---CCC--eEEecCCCcc-c-HHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI---GAD--NIVKVSTNLQ-D-IAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~l---g~~--~v~~~~~~~~-~-~~~~~~~~~~~~  259 (372)
                      .+.++||+|+ +++|.++++.+...|+ .|+++.+++++.+. ++++   +..  ..+..|-.+. + .......+.+ .
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~-~   88 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT-H   88 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH-H
T ss_pred             CCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH-h
Confidence            4678999998 9999999999989999 68888888776443 3333   221  2233333332 2 2233333322 2


Q ss_pred             CCcceEEEeCCCc
Q 017426          260 GTGIDVSFDCAGL  272 (372)
Q Consensus       260 ~~~~d~vid~~g~  272 (372)
                      .+++|++|++.|.
T Consensus        89 ~g~iD~lv~nAg~  101 (311)
T 3o26_A           89 FGKLDILVNNAGV  101 (311)
T ss_dssp             HSSCCEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence            3589999999884

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=96.76  E-value=0.016  Score=50.14  Aligned_cols=82  Identities=18%  Similarity=0.307  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh----C-CCeEEecCC--Cc-ccHHHHHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----G-ADNIVKVST--NL-QDIAEEVEKIQKA  258 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l----g-~~~v~~~~~--~~-~~~~~~~~~~~~~  258 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+++++++++.+.+ +.+    + ....+..+-  .+ .+..+.+.++.+ 
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   88 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV-   88 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH-
Confidence            5778999987 9999999999999999 578888888765533 222    2 222233332  22 223333333333 


Q ss_pred             cCCcceEEEeCCCc
Q 017426          259 MGTGIDVSFDCAGL  272 (372)
Q Consensus       259 ~~~~~d~vid~~g~  272 (372)
                      ..+++|++|++.|.
T Consensus        89 ~~g~id~lv~nAg~  102 (252)
T 3f1l_A           89 NYPRLDGVLHNAGL  102 (252)
T ss_dssp             HCSCCSEEEECCCC
T ss_pred             hCCCCCEEEECCcc
Confidence            24689999998874

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.75  E-value=0.0088  Score=54.50  Aligned_cols=48  Identities=27%  Similarity=0.373  Sum_probs=41.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCC
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD  236 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~  236 (372)
                      -.|.+|.|.|.|.+|+.+++.++.+|+ +|++.+.++++.++.+.+++.
T Consensus       173 L~GktV~I~G~GnVG~~~A~~l~~~Ga-kVvvsD~~~~~~~~a~~~ga~  220 (355)
T 1c1d_A          173 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHT  220 (355)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHhcCCE
Confidence            478999999999999999999999999 577888887776677777754

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.75  E-value=0.0082  Score=51.57  Aligned_cols=104  Identities=22%  Similarity=0.272  Sum_probs=69.3

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHHh----CCCe-EEecCCCcccHHHHHHHHHHH-
Q 017426          186 NIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKEI----GADN-IVKVSTNLQDIAEEVEKIQKA-  258 (372)
Q Consensus       186 ~~~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~l----g~~~-v~~~~~~~~~~~~~~~~~~~~-  258 (372)
                      +..++.+||-+|+| .|..+..+++..+ ...+++++.+++..+.+++.    |... +...   ..+..+.+..+... 
T Consensus        57 ~~~~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~---~~d~~~~~~~~~~~~  132 (239)
T 2hnk_A           57 KISGAKRIIEIGTF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLK---LGSALETLQVLIDSK  132 (239)
T ss_dssp             HHHTCSEEEEECCT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEE---ESCHHHHHHHHHHCS
T ss_pred             HhhCcCEEEEEeCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEE---ECCHHHHHHHHHhhc
Confidence            34578899999987 4888889999874 34799999999887776653    5432 2111   12333333322210 


Q ss_pred             ---------c-C-CcceEEEeCCCcH---HHHHHHHHHhccCCEEEEEc
Q 017426          259 ---------M-G-TGIDVSFDCAGLN---KTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       259 ---------~-~-~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g  293 (372)
                               . . +.||+||......   ..+..+.+.|+++|.++...
T Consensus       133 ~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  181 (239)
T 2hnk_A          133 SAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN  181 (239)
T ss_dssp             SCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             ccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence                     0 1 6799999765543   45678889999999988753

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.75  E-value=0.011  Score=52.23  Aligned_cols=82  Identities=28%  Similarity=0.334  Sum_probs=54.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      .+.++||+|+ +++|.++++.+...|+ .|+++++++++.+. .++++... .+..|-.+ ++..+.+.+..+. .+++|
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD  103 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAK-WGRVD  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4678999987 9999999999999999 57788888776554 44555432 22233222 2333334433332 35899


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|++.|.
T Consensus       104 ~lv~nAg~  111 (277)
T 4dqx_A          104 VLVNNAGF  111 (277)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99998873

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=96.75  E-value=0.0082  Score=52.04  Aligned_cols=104  Identities=23%  Similarity=0.251  Sum_probs=73.2

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHH----hCCCe-EEecCCCcccHHHHHH
Q 017426          180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGADN-IVKVSTNLQDIAEEVE  253 (372)
Q Consensus       180 ~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~-v~~~~~~~~~~~~~~~  253 (372)
                      ..+....++++++||-.|+|. |..+..+++..+ ...+++++.+++..+.+++    .|... +....   .|+.+.  
T Consensus        84 ~i~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~--  157 (255)
T 3mb5_A           84 LIVAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKL---KDIYEG--  157 (255)
T ss_dssp             HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEEC---SCGGGC--
T ss_pred             HHHHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEE---Cchhhc--
Confidence            344667889999999999875 888889998853 4479999999988777655    35433 22211   121111  


Q ss_pred             HHHHHcCCcceEEEeCCCcH-HHHHHHHHHhccCCEEEEEc
Q 017426          254 KIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       254 ~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g  293 (372)
                       +   ....+|+|+.....+ ..+..+.+.|+++|+++.+.
T Consensus       158 -~---~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  194 (255)
T 3mb5_A          158 -I---EEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYT  194 (255)
T ss_dssp             -C---CCCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             -c---CCCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence             1   245699999766654 37888999999999998764

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.75  E-value=0.01  Score=52.33  Aligned_cols=82  Identities=22%  Similarity=0.327  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-H---HhCC-CeEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGA-DNIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~---~lg~-~~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+++++++++.+.+ +   ..+. ...+..|-.+ ++..+.+.++.+. .+
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-~g  108 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE-LG  108 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            4679999987 9999999999999999 577777777654432 2   2332 2223333222 2333444443332 35


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus       109 ~iD~lvnnAg~  119 (276)
T 3r1i_A          109 GIDIAVCNAGI  119 (276)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            89999998874

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.74  E-value=0.014  Score=51.85  Aligned_cols=82  Identities=21%  Similarity=0.207  Sum_probs=49.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh--hHHH----HHHHhCCCeE-EecCCCc-ccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD--YRLS----VAKEIGADNI-VKVSTNL-QDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~--~~~~----~~~~lg~~~v-~~~~~~~-~~~~~~~~~~~~~~  259 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|++++++.  ++.+    .+++.+.... +..|-.+ .+..+.+.++.+. 
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-  125 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA-  125 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH-
Confidence            4789999987 9999999999999999 466665542  2222    2334453322 2222222 2233333333322 


Q ss_pred             CCcceEEEeCCCc
Q 017426          260 GTGIDVSFDCAGL  272 (372)
Q Consensus       260 ~~~~d~vid~~g~  272 (372)
                      .+++|++|++.|.
T Consensus       126 ~g~iD~lv~nAg~  138 (294)
T 3r3s_A          126 LGGLDILALVAGK  138 (294)
T ss_dssp             HTCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            3589999998774

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=96.74  E-value=0.0088  Score=52.62  Aligned_cols=82  Identities=21%  Similarity=0.215  Sum_probs=53.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCCC-eEEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      .+.++||+|+ +++|.++++.+...|+ .|+++++++++.+. .++++.. ..+..|-.+ ++..+.+.+..+. .+++|
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD  104 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEK-FGRVD  104 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4678899987 9999999999999999 57788888776554 4555522 223333222 2333344433332 35899


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|++.|.
T Consensus       105 ~lVnnAg~  112 (272)
T 4dyv_A          105 VLFNNAGT  112 (272)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998874

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.74  E-value=0.01  Score=51.43  Aligned_cols=82  Identities=22%  Similarity=0.268  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ +++|.++++.+...|+ .|+++++++++.+.+ +++   +.. ..+..|-.+ .+..+.+.++.+. .+
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g   85 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE-FG   85 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            4678999998 9999999999999999 578888888765543 332   322 122233222 2333333333322 35


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus        86 ~id~li~~Ag~   96 (253)
T 3qiv_A           86 GIDYLVNNAAI   96 (253)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            89999998874

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.74  E-value=0.0073  Score=52.92  Aligned_cols=82  Identities=24%  Similarity=0.276  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ +++|.++++.+...|+ .|+++++++++.+.+ +++   +... .+..|-.+ ++..+.+.+..+. .+
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g   80 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDT-WG   80 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            3678999987 9999999999999999 577888887765543 232   4322 22223222 2333334433332 35


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus        81 ~iD~lVnnAG~   91 (264)
T 3tfo_A           81 RIDVLVNNAGV   91 (264)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            89999998874

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=96.74  E-value=0.0092  Score=52.55  Aligned_cols=81  Identities=22%  Similarity=0.281  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH----HHhCC-Ce--EEecCCCc-ccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGA-DN--IVKVSTNL-QDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~----~~lg~-~~--v~~~~~~~-~~~~~~~~~~~~~~  259 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+.+    +..+. ..  ++..|-.+ +++.+.+.++.+. 
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-  108 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ-  108 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh-
Confidence            4678999987 9999999999999998 577787887665433    22332 11  22223222 2333333333322 


Q ss_pred             CCcceEEEeCCC
Q 017426          260 GTGIDVSFDCAG  271 (372)
Q Consensus       260 ~~~~d~vid~~g  271 (372)
                      .+++|++|++.|
T Consensus       109 ~g~iD~vi~~Ag  120 (279)
T 1xg5_A          109 HSGVDICINNAG  120 (279)
T ss_dssp             HCCCSEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence            357999999887

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=96.73  E-value=0.0093  Score=51.18  Aligned_cols=81  Identities=15%  Similarity=0.211  Sum_probs=53.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCC-eEEecCCCc-ccHHHHHHHHHHHcCCcceE
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~  265 (372)
                      +.++||+|+ +++|.++++.+...|+ .|+++++++++.+.+ +.++.. ..+..|-.+ ++..+.+.+..+. .+++|+
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~id~   80 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEW-GGLPEL   80 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHH-HCSCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh-cCCCcE
Confidence            568999997 9999999999999999 578888888776644 344321 122223222 2333344443332 358999


Q ss_pred             EEeCCCc
Q 017426          266 SFDCAGL  272 (372)
Q Consensus       266 vid~~g~  272 (372)
                      +|++.|.
T Consensus        81 lvnnAg~   87 (235)
T 3l6e_A           81 VLHCAGT   87 (235)
T ss_dssp             EEEECCC
T ss_pred             EEECCCC
Confidence            9998874

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=96.73  E-value=0.0091  Score=51.63  Aligned_cols=82  Identities=22%  Similarity=0.297  Sum_probs=54.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCCCeE-EecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGADNI-VKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~~~v-~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+++++++++.+. .++++.... +..|-.+ ++..+.+.+..+. .+++|
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~id   82 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQAL-TGGID   82 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHH-HSCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHH-CCCCC
Confidence            4688999987 9999999999999999 58888888876554 455664332 2222222 2333344443332 35899


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|++.|.
T Consensus        83 ~lv~nAg~   90 (247)
T 3rwb_A           83 ILVNNASI   90 (247)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998873

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=96.73  E-value=0.0073  Score=52.72  Aligned_cols=82  Identities=23%  Similarity=0.285  Sum_probs=53.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HH---hCCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |++|.++++.+...|+ .|+++++++++.+.+ +.   .+.. .++..|-.+ ++..+.+.++.+. .+
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g  105 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAA-HG  105 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHh-cC
Confidence            5678999987 9999999999989999 578888888765543 22   3322 222233222 2333344443332 35


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus       106 ~id~lv~~Ag~  116 (262)
T 3rkr_A          106 RCDVLVNNAGV  116 (262)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999998875

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.73  E-value=0.021  Score=50.29  Aligned_cols=82  Identities=20%  Similarity=0.261  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecC------------hhHHHH----HHHhCCCe-EEecCCCc-ccHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD------------DYRLSV----AKEIGADN-IVKVSTNL-QDIA  249 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~------------~~~~~~----~~~lg~~~-v~~~~~~~-~~~~  249 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|++++++            .++.+.    ++..+... .+..|-.+ .+..
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   87 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS   87 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence            4678999987 9999999999999999 57777665            333332    23334322 22223222 2333


Q ss_pred             HHHHHHHHHcCCcceEEEeCCCc
Q 017426          250 EEVEKIQKAMGTGIDVSFDCAGL  272 (372)
Q Consensus       250 ~~~~~~~~~~~~~~d~vid~~g~  272 (372)
                      +.+.++.+. .+++|++|++.|.
T Consensus        88 ~~~~~~~~~-~g~id~lv~nAg~  109 (287)
T 3pxx_A           88 RELANAVAE-FGKLDVVVANAGI  109 (287)
T ss_dssp             HHHHHHHHH-HSCCCEEEECCCC
T ss_pred             HHHHHHHHH-cCCCCEEEECCCc
Confidence            334443332 3589999998874

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.72  E-value=0.011  Score=52.76  Aligned_cols=82  Identities=28%  Similarity=0.391  Sum_probs=53.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .|.++||+|+ |++|.++++.+...|+ .|+++++++++.+.+ +++   +... .+..|-.+ .+..+.+.++.+. .+
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g  107 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL-LG  107 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh-CC
Confidence            5789999998 9999999999999999 578888888765543 222   3322 22333222 2333334433322 35


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus       108 ~id~lvnnAg~  118 (301)
T 3tjr_A          108 GVDVVFSNAGI  118 (301)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            89999999873

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.72  E-value=0.011  Score=51.02  Aligned_cols=82  Identities=21%  Similarity=0.261  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH----HhC--CCeEEecCC--Cc-ccHHHHHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIG--ADNIVKVST--NL-QDIAEEVEKIQKA  258 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~----~lg--~~~v~~~~~--~~-~~~~~~~~~~~~~  258 (372)
                      .|.++||+|+ |++|.++++.+...|+ .|+.+++++++.+.+.    +.+  ...++..+-  .+ .++.+.+.++.+.
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            4778999987 9999999999999999 5788888887655432    233  222333222  22 2233333333322


Q ss_pred             cCCcceEEEeCCCc
Q 017426          259 MGTGIDVSFDCAGL  272 (372)
Q Consensus       259 ~~~~~d~vid~~g~  272 (372)
                       .+++|++|++.|.
T Consensus        92 -~g~id~lv~nAg~  104 (247)
T 3i1j_A           92 -FGRLDGLLHNASI  104 (247)
T ss_dssp             -HSCCSEEEECCCC
T ss_pred             -CCCCCEEEECCcc
Confidence             3589999998874

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.71  E-value=0.013  Score=50.58  Aligned_cols=82  Identities=22%  Similarity=0.227  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH----HhCCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~----~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ +.+|.++++.+...|+ .|+.+.+++++.+.+.    +.+... .+..|-.+ ++..+.+.++.+ ..+
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   81 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKA-ENL   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH-TTC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH-HcC
Confidence            3678999987 9999999999999999 5778878876654332    234322 22233222 233334444433 346


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus        82 ~id~li~~Ag~   92 (247)
T 3lyl_A           82 AIDILVNNAGI   92 (247)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            89999998874

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=96.71  E-value=0.019  Score=50.14  Aligned_cols=82  Identities=18%  Similarity=0.177  Sum_probs=52.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCC------CeEEecCCCc-ccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGA------DNIVKVSTNL-QDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~------~~v~~~~~~~-~~~~~~~~~~~~~~  259 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+. .+++..      ...+..|-.+ +++.+.+....+. 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-   83 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH-   83 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH-
Confidence            4678999998 9999999999999998 57777788766543 333321      1122223222 2333344333322 


Q ss_pred             CCcceEEEeCCCc
Q 017426          260 GTGIDVSFDCAGL  272 (372)
Q Consensus       260 ~~~~d~vid~~g~  272 (372)
                      .+++|++|++.|.
T Consensus        84 ~g~id~lv~~Ag~   96 (267)
T 2gdz_A           84 FGRLDILVNNAGV   96 (267)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2579999999874

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.71  E-value=0.017  Score=49.03  Aligned_cols=114  Identities=10%  Similarity=0.071  Sum_probs=66.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh-hHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD-YRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      .|.+|||.|+|.+|...++++...|++ |++++.+. +..+.+.+-+-...+.-.....            .-.++|+||
T Consensus        30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~-VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~------------dL~~adLVI   96 (223)
T 3dfz_A           30 KGRSVLVVGGGTIATRRIKGFLQEGAA-ITVVAPTVSAEINEWEAKGQLRVKRKKVGEE------------DLLNVFFIV   96 (223)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHGGGCCC-EEEECSSCCHHHHHHHHTTSCEEECSCCCGG------------GSSSCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCE-EEEECCCCCHHHHHHHHcCCcEEEECCCCHh------------HhCCCCEEE
Confidence            478999999999999999999999995 55664433 2233222223222222111111            125799999


Q ss_pred             eCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccC-cEEEee
Q 017426          268 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVRE-VDVVGV  316 (372)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~i~~~  316 (372)
                      -+++.+ ..+..+...+..|..+.....+...++.......+. +.+--+
T Consensus        97 aAT~d~-~~N~~I~~~ak~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIS  145 (223)
T 3dfz_A           97 VATNDQ-AVNKFVKQHIKNDQLVNMASSFSDGNIQIPAQFSRGRLSLAIS  145 (223)
T ss_dssp             ECCCCT-HHHHHHHHHSCTTCEEEC-----CCSEECCEEEEETTEEEEEE
T ss_pred             ECCCCH-HHHHHHHHHHhCCCEEEEeCCcccCeEEEeeEEEeCCEEEEEE
Confidence            999986 445544444558887776555555566555555443 343333

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.71  E-value=0.012  Score=52.00  Aligned_cols=82  Identities=23%  Similarity=0.286  Sum_probs=53.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      ++.++||+|+ +++|.++++.+...|+ .|++++++.++.+.+ +++   +... .+..|-.+ .+..+.+.+..+. .+
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g  104 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK-FG  104 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence            4678999987 9999999999999999 577788887765543 333   2222 22233222 2333444444332 35


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|+++++.|.
T Consensus       105 ~iD~lVnnAg~  115 (283)
T 3v8b_A          105 HLDIVVANAGI  115 (283)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            89999998874

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.70  E-value=0.012  Score=52.08  Aligned_cols=82  Identities=26%  Similarity=0.220  Sum_probs=54.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+++++++++.+.+ +.++... .+..|-.+ .+..+.+.+..+. .+++|
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~iD   81 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAA-FGKID   81 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHh-cCCCC
Confidence            4678999987 9999999999999999 578888888776654 4454332 22223222 2333344443332 35899


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      +++++.|.
T Consensus        82 ~lvnnAg~   89 (281)
T 3zv4_A           82 TLIPNAGI   89 (281)
T ss_dssp             EEECCCCC
T ss_pred             EEEECCCc
Confidence            99998874

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.70  E-value=0.013  Score=50.57  Aligned_cols=81  Identities=28%  Similarity=0.329  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |++|.++++.+...|+ .|+++++++++.+.+ +++   +... .+..|-.+ ++..+.+.+..+. .+
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~g   83 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEA-LG   83 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            3678999997 9999999999999999 577787887765433 232   4322 22233222 2333334333322 35


Q ss_pred             cceEEEeCCC
Q 017426          262 GIDVSFDCAG  271 (372)
Q Consensus       262 ~~d~vid~~g  271 (372)
                      ++|++|++.|
T Consensus        84 ~id~lv~nAg   93 (247)
T 2jah_A           84 GLDILVNNAG   93 (247)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            8999999877

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=96.70  E-value=0.011  Score=52.65  Aligned_cols=82  Identities=11%  Similarity=0.147  Sum_probs=53.8

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCeEEEEecChhHHHHH----HHhCCCeEEecCCCcc-cHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-G--PIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQ-DIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g--~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~----~~lg~~~v~~~~~~~~-~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ |  ++|.++++.+...|+ .|++++++++..+.+    ++.+....+..|-.+. +..+.+.++.+. .
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~  106 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEE-W  106 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4789999987 5  999999999999999 577777776544333    3445444444443332 333444443332 3


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus       107 g~iD~lVnnAG~  118 (296)
T 3k31_A          107 GSLDFVVHAVAF  118 (296)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            589999998874

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.69  E-value=0.015  Score=50.71  Aligned_cols=82  Identities=22%  Similarity=0.204  Sum_probs=53.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HH---hCCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .|.++||+|+ +.+|.++++.+...|+ .|+++++++++.+.+ ++   .+... .+..|-.+ .+..+.+.++.+ ..+
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-~~g   87 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMK-AYG   87 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH-HTS
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH-HcC
Confidence            5789999987 9999999999999999 578888887765533 22   34322 22233222 233344444433 246


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus        88 ~id~lv~nAg~   98 (264)
T 3ucx_A           88 RVDVVINNAFR   98 (264)
T ss_dssp             CCSEEEECCCS
T ss_pred             CCcEEEECCCC
Confidence            89999998754

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.69  E-value=0.013  Score=50.94  Aligned_cols=82  Identities=27%  Similarity=0.272  Sum_probs=54.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      .+.++||+|+ +++|.++++.+...|+ .|+.+++++++.+.+ ++++... .+..|-.+ .+..+.+.++.+. .+++|
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id   85 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSK-FGKVD   85 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHh-cCCCC
Confidence            4678999998 9999999999999999 588888888776644 4565432 22233222 2333444444332 35899


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|++.|.
T Consensus        86 ~li~~Ag~   93 (261)
T 3n74_A           86 ILVNNAGI   93 (261)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99998763

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.68  E-value=0.013  Score=51.52  Aligned_cols=82  Identities=24%  Similarity=0.236  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh---CCC-eEEecCCCcccHHHHHHHHHHHcCCcc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI---GAD-NIVKVSTNLQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l---g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|++++++++..+.++++   +.. ..+..|-.+.+..+.+.+..+. .+++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~-~g~i  107 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAA-TRRV  107 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHH-HSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHh-cCCC
Confidence            4789999987 9999999999999999 577777766555555443   322 1222333222222222222221 2589


Q ss_pred             eEEEeCCCc
Q 017426          264 DVSFDCAGL  272 (372)
Q Consensus       264 d~vid~~g~  272 (372)
                      |++|++.|.
T Consensus       108 D~lv~nAg~  116 (273)
T 3uf0_A          108 DVLVNNAGI  116 (273)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCCC
Confidence            999998774

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.68  E-value=0.0073  Score=53.78  Aligned_cols=82  Identities=22%  Similarity=0.254  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCC---C--eEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGA---D--NIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~---~--~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ +++|.++++.+...|+ .|+++++++++.+. .+++..   .  ..+..|-.+ ++..+.+.++.+. .
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~  117 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA-F  117 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH-c
Confidence            4678999987 9999999999999999 57777787766443 344421   1  223333222 2333334333332 3


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus       118 g~iD~lvnnAg~  129 (293)
T 3rih_A          118 GALDVVCANAGI  129 (293)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            589999998873

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.68  E-value=0.013  Score=51.16  Aligned_cols=81  Identities=25%  Similarity=0.295  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh-----CCCe-EEecCCCc-ccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI-----GADN-IVKVSTNL-QDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l-----g~~~-v~~~~~~~-~~~~~~~~~~~~~~  259 (372)
                      .+.++||+|+ |++|.++++.+...|+ .|+++++++++.+.+ +++     +... .+..|-.+ +++.+.+.+..+. 
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-   89 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER-   89 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH-
Confidence            4678999987 9999999999999999 577788887665432 222     4322 22233222 2333444443322 


Q ss_pred             CCcceEEEeCCC
Q 017426          260 GTGIDVSFDCAG  271 (372)
Q Consensus       260 ~~~~d~vid~~g  271 (372)
                      .+++|++|++.|
T Consensus        90 ~g~id~lv~nAg  101 (267)
T 1iy8_A           90 FGRIDGFFNNAG  101 (267)
T ss_dssp             HSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            357999999876

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.67  E-value=0.017  Score=50.81  Aligned_cols=82  Identities=22%  Similarity=0.242  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHh---CCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI---GADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~l---g~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+. .+++   +... .+..|-.+ +++.+.+.+..+. .+
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g   98 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER-YG   98 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH-hC
Confidence            4678999987 9999999999999999 57778888766543 2333   4322 22233222 2333334443332 35


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus        99 ~iD~lv~~Ag~  109 (277)
T 2rhc_B           99 PVDVLVNNAGR  109 (277)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            89999998873

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=96.67  E-value=0.013  Score=50.75  Aligned_cols=97  Identities=19%  Similarity=0.247  Sum_probs=61.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCC-CcccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      -+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+.       ..+.++- +.++..+.+.++.+ ..+++|++
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~-------~~~~~d~~d~~~v~~~~~~~~~-~~g~iD~l   91 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNAD-------HSFTIKDSGEEEIKSVIEKINS-KSIKVDTF   91 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTSS-------EEEECSCSSHHHHHHHHHHHHT-TTCCEEEE
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc-------cceEEEeCCHHHHHHHHHHHHH-HcCCCCEE
Confidence            4678999997 9999999999999999 57778777654321       1122222 22333344444432 24689999


Q ss_pred             EeCCCcH-----------H---------------HHHHHHHHhccCCEEEEEcC
Q 017426          267 FDCAGLN-----------K---------------TMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       267 id~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~  294 (372)
                      |++.|..           +               ..+.+...++.+|+++.++.
T Consensus        92 i~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  145 (251)
T 3orf_A           92 VCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGA  145 (251)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEec
Confidence            9988731           1               12334555666789988864

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.67  E-value=0.01  Score=51.67  Aligned_cols=82  Identities=17%  Similarity=0.165  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-H---HhCCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+++++++++.+.+ +   +.+... .+..|-.+ .+..+.+.+..+. .+
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g   88 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ-FG   88 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            4678999987 9999999999888999 577888887765433 2   234322 22233222 2333334443332 35


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus        89 ~id~lv~nAg~   99 (256)
T 3gaf_A           89 KITVLVNNAGG   99 (256)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            89999998774

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.66  E-value=0.011  Score=51.21  Aligned_cols=82  Identities=26%  Similarity=0.331  Sum_probs=53.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+. .++++... .+..|-.+ +++.+.+.+..+. .+++|
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~iD   81 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREE-FGSVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4678999998 9999999999999999 57777788776554 34444322 22223222 2343444443332 25899


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|++.|.
T Consensus        82 ~lv~nAg~   89 (254)
T 1hdc_A           82 GLVNNAGI   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998873

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.66  E-value=0.013  Score=51.52  Aligned_cols=81  Identities=19%  Similarity=0.255  Sum_probs=52.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCC--C-eEEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGA--D-NIVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~--~-~v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+. .+++..  . ..+..|-.+ +++.+.+.+..+ ..++
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g~  105 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGE-LSAR  105 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHH-HCSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHH-hcCC
Confidence            4678999998 9999999999999998 57888888776543 334421  1 112222222 223333333332 2458


Q ss_pred             ceEEEeCCC
Q 017426          263 IDVSFDCAG  271 (372)
Q Consensus       263 ~d~vid~~g  271 (372)
                      +|++|++.|
T Consensus       106 iD~lvnnAg  114 (276)
T 2b4q_A          106 LDILVNNAG  114 (276)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.66  E-value=0.0092  Score=51.79  Aligned_cols=92  Identities=21%  Similarity=0.312  Sum_probs=57.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh-------------------hHHHHH----HHhCCC-eEEecCCCc
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD-------------------YRLSVA----KEIGAD-NIVKVSTNL  245 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~-------------------~~~~~~----~~lg~~-~v~~~~~~~  245 (372)
                      +.+|+|.|+|++|..+++.+...|...+.+++.+.                   .|.+.+    ++++.. .+..+... 
T Consensus        31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~-  109 (249)
T 1jw9_B           31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL-  109 (249)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC-
T ss_pred             CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEecc-
Confidence            46899999999999999999999998888898876                   454433    233322 22222211 


Q ss_pred             ccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCC
Q 017426          246 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGG  287 (372)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G  287 (372)
                      -+ .+.+.++.    .++|+||+|++.......+.+.+...|
T Consensus       110 ~~-~~~~~~~~----~~~DvVi~~~d~~~~~~~l~~~~~~~~  146 (249)
T 1jw9_B          110 LD-DAELAALI----AEHDLVLDCTDNVAVRNQLNAGCFAAK  146 (249)
T ss_dssp             CC-HHHHHHHH----HTSSEEEECCSSHHHHHHHHHHHHHHT
T ss_pred             CC-HhHHHHHH----hCCCEEEEeCCCHHHHHHHHHHHHHcC
Confidence            11 11233332    379999999998754444444443333

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=96.65  E-value=0.0098  Score=52.58  Aligned_cols=82  Identities=22%  Similarity=0.189  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh----CCC-eEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GAD-NIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l----g~~-~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+++++++++.+.+ +++    +.. ..+..|-.+ ++..+.+.+..+. .
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~  109 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE-F  109 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            5778999987 9999999999999999 578888888765433 222    222 333333322 2333444443332 3


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus       110 g~iD~lvnnAG~  121 (281)
T 4dry_A          110 ARLDLLVNNAGS  121 (281)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            589999998874

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.65  E-value=0.015  Score=49.37  Aligned_cols=102  Identities=17%  Similarity=0.133  Sum_probs=67.8

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-----CCeEEEEecChhHHHHHHHh----C-----CCeEEecCCC-cccHHH
Q 017426          186 NIGPETNVLIMGAGPIGLVTMLAARAFG-----APRIVIVDVDDYRLSVAKEI----G-----ADNIVKVSTN-LQDIAE  250 (372)
Q Consensus       186 ~~~~g~~vlI~Gag~~G~~ai~l~~~~g-----~~~vv~v~~~~~~~~~~~~l----g-----~~~v~~~~~~-~~~~~~  250 (372)
                      .++++++||-.|+|. |..+..+++..+     ...|++++.+++..+.+++.    +     ...+...... ...+.+
T Consensus        77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~  155 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEE  155 (227)
T ss_dssp             TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHH
T ss_pred             hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccc
Confidence            578999999999865 888888888875     23799999999887776543    3     2222111111 111111


Q ss_pred             HHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEc
Q 017426          251 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       251 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ...     ....||+|+...........+.+.|+++|+++..-
T Consensus       156 ~~~-----~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~  193 (227)
T 2pbf_A          156 EKK-----ELGLFDAIHVGASASELPEILVDLLAENGKLIIPI  193 (227)
T ss_dssp             HHH-----HHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEE
T ss_pred             cCc-----cCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence            001     12579999987665556678889999999988753

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=96.64  E-value=0.0017  Score=56.01  Aligned_cols=100  Identities=17%  Similarity=0.262  Sum_probs=63.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      .|+++||+|+ +++|.++++.+...|+ +|+++++++++.+....-.+ ..+..|-.++   +.++++.+. -+++|+++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~~~~-~~~~~Dv~~~---~~v~~~~~~-~g~iDiLV   83 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPRHPRI-RREELDITDS---QRLQRLFEA-LPRLDVLV   83 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCCCTTE-EEEECCTTCH---HHHHHHHHH-CSCCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhhcCCe-EEEEecCCCH---HHHHHHHHh-cCCCCEEE
Confidence            6899999987 9999999999999999 58888887766543221111 1122222222   234443332 36899999


Q ss_pred             eCCCcH--------H---------------HHHHHHHHhc-cCCEEEEEcC
Q 017426          268 DCAGLN--------K---------------TMSTALGATC-AGGKVCLVGM  294 (372)
Q Consensus       268 d~~g~~--------~---------------~~~~~~~~l~-~~G~~v~~g~  294 (372)
                      ++.|..        +               ..+.++..|+ .+|+++.++.
T Consensus        84 NNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS  134 (242)
T 4b79_A           84 NNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIAS  134 (242)
T ss_dssp             ECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECC
T ss_pred             ECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEee
Confidence            988742        1               1223455554 4689888864

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=96.64  E-value=0.0089  Score=51.75  Aligned_cols=82  Identities=17%  Similarity=0.242  Sum_probs=53.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCC-eEEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+.+++++++.+.+ +.++.. ..+..|-.+ ++..+.+.+..+. .+++|
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD   85 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDE-FGGVD   85 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH-HCCCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4678999987 9999999999999999 578888888766544 444422 222233222 2333344443332 35899


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      +++++.|.
T Consensus        86 ~lv~nAg~   93 (248)
T 3op4_A           86 ILVNNAGI   93 (248)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998873

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.63  E-value=0.015  Score=50.72  Aligned_cols=82  Identities=27%  Similarity=0.326  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh----CCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GADN-IVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~-v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+.+ +++    +... .+..|-.+ +++.+.+.+..+. .
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   83 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS-F   83 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4678999987 9999999999999999 577788887665432 222    4322 22223222 2333344433322 2


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus        84 g~id~lv~~Ag~   95 (263)
T 3ai3_A           84 GGADILVNNAGT   95 (263)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            579999998873

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=96.63  E-value=0.015  Score=50.81  Aligned_cols=82  Identities=18%  Similarity=0.157  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HH----hCCC--eEEecCCCc-ccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE----IGAD--NIVKVSTNL-QDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~----lg~~--~v~~~~~~~-~~~~~~~~~~~~~~  259 (372)
                      .+.++||+|+ +++|.++++.+...|+ .|+++++++++.+.+ ++    .+..  ..+..|-.+ .+..+.+.++.+. 
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-   84 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT-   84 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH-
Confidence            4678999987 9999999999999999 578888887765433 22    2322  222233222 2233333333322 


Q ss_pred             CCcceEEEeCCCc
Q 017426          260 GTGIDVSFDCAGL  272 (372)
Q Consensus       260 ~~~~d~vid~~g~  272 (372)
                      .+++|+++++.|.
T Consensus        85 ~g~id~lvnnAg~   97 (265)
T 3lf2_A           85 LGCASILVNNAGQ   97 (265)
T ss_dssp             HCSCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            3589999998874

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=96.61  E-value=0.011  Score=52.09  Aligned_cols=82  Identities=23%  Similarity=0.308  Sum_probs=54.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCCC-eEEecCCCcc-cHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGAD-NIVKVSTNLQ-DIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~~-~v~~~~~~~~-~~~~~~~~~~~~~~~~~d  264 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+++++++++.+. .++++.. ..+..|-.+. +..+.+.+..+. .+++|
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD  105 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAA-FGGVD  105 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHH-HSSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4678999987 9999999999999999 57888888776554 4556532 2233333222 233334333332 35899


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|++.|.
T Consensus       106 ~lvnnAg~  113 (277)
T 3gvc_A          106 KLVANAGV  113 (277)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998874

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.61  E-value=0.02  Score=50.19  Aligned_cols=82  Identities=23%  Similarity=0.328  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-H---HhCCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~---~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+.+ +   +.+.. ..+..|-.+ +++.+.+.++.+ ..+
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~g  107 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA-EIG  107 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH-HTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHH-HCC
Confidence            4678999998 9999999999999998 577787887665432 2   23432 222233222 233334443332 235


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus       108 ~iD~li~~Ag~  118 (272)
T 1yb1_A          108 DVSILVNNAGV  118 (272)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCcEEEECCCc
Confidence            89999998873

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.60  E-value=0.014  Score=52.39  Aligned_cols=101  Identities=13%  Similarity=0.210  Sum_probs=70.1

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh----CCCeEEecCCCcccHHHHHHHHHHH
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      +...++++++||-+|+|. |..+..+++..|+ .|++++.+++..+.+++.    |....+.+..  .++.    ++   
T Consensus        84 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~--~d~~----~~---  152 (318)
T 2fk8_A           84 DKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLL--QGWE----DF---  152 (318)
T ss_dssp             TTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE--SCGG----GC---
T ss_pred             HhcCCCCcCEEEEEcccc-hHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--CChH----HC---
Confidence            446778999999999876 8888889888787 799999999988877654    3321111111  1111    11   


Q ss_pred             cCCcceEEEeC-----CCc---HHHHHHHHHHhccCCEEEEEcCC
Q 017426          259 MGTGIDVSFDC-----AGL---NKTMSTALGATCAGGKVCLVGMG  295 (372)
Q Consensus       259 ~~~~~d~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g~~  295 (372)
                       .+.+|+|+..     .+.   ...+..+.+.|+|+|+++.....
T Consensus       153 -~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  196 (318)
T 2fk8_A          153 -AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSV  196 (318)
T ss_dssp             -CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred             -CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence             2579999865     432   34677888999999999886543

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=96.60  E-value=0.021  Score=49.69  Aligned_cols=80  Identities=23%  Similarity=0.325  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh-----C-CCeEEecCCCc-ccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI-----G-ADNIVKVSTNL-QDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l-----g-~~~v~~~~~~~-~~~~~~~~~~~~~~  259 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+.+ +++     + -...+..|-.+ +++.+.+.+..+. 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-   83 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL-   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            4678999998 9999999999999999 577787887665432 332     3 11223233222 2333444444332 


Q ss_pred             CCcceEEEeCCC
Q 017426          260 GTGIDVSFDCAG  271 (372)
Q Consensus       260 ~~~~d~vid~~g  271 (372)
                      .+ +|++|++.|
T Consensus        84 ~g-id~lv~~Ag   94 (260)
T 2z1n_A           84 GG-ADILVYSTG   94 (260)
T ss_dssp             TC-CSEEEECCC
T ss_pred             cC-CCEEEECCC
Confidence            23 999999887

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=96.60  E-value=0.021  Score=49.53  Aligned_cols=80  Identities=29%  Similarity=0.340  Sum_probs=51.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HH---hCCC-eEEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      +.++||+|+ |.+|.++++.+...|+ .|+++++++++.+.+ ++   .+.. ..+..|-.+ +++.+.+.+..+. .++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKT-LGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH-TTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-hCC
Confidence            468999987 9999999999999999 577777887665432 22   2432 222233222 2333444443332 358


Q ss_pred             ceEEEeCCC
Q 017426          263 IDVSFDCAG  271 (372)
Q Consensus       263 ~d~vid~~g  271 (372)
                      +|++|++.|
T Consensus        80 id~lv~nAg   88 (256)
T 1geg_A           80 FDVIVNNAG   88 (256)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999886

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.60  E-value=0.012  Score=51.32  Aligned_cols=82  Identities=20%  Similarity=0.200  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCC-eEEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+.+ ++++.. ..+..|-.+ ++..+.+.+..+. .+++|
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~iD   82 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEE-FGRLH   82 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHH-cCCCc
Confidence            4678999998 9999999999999999 577888887766543 444422 122223222 2333334433322 35799


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|++.|.
T Consensus        83 ~lvnnAg~   90 (263)
T 2a4k_A           83 GVAHFAGV   90 (263)
T ss_dssp             EEEEGGGG
T ss_pred             EEEECCCC
Confidence            99998763

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.60  E-value=0.019  Score=49.95  Aligned_cols=81  Identities=21%  Similarity=0.261  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCC-CeEEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGA-DNIVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~-~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+.+ +.+.. ...+..|-.+ .++.+.+.+..+. .+++|
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~-~g~iD   88 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDA-LGGFD   88 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHH-HTCCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4678999987 9999999999999999 577888887766544 33432 1222233222 2333344433322 25799


Q ss_pred             EEEeCCC
Q 017426          265 VSFDCAG  271 (372)
Q Consensus       265 ~vid~~g  271 (372)
                      ++|++.|
T Consensus        89 ~lv~~Ag   95 (263)
T 3ak4_A           89 LLCANAG   95 (263)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999887

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.59  E-value=0.031  Score=51.39  Aligned_cols=93  Identities=19%  Similarity=0.209  Sum_probs=63.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCC
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  271 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  271 (372)
                      +|+|+|+|.+|..+++.+.. .. .|.+++++.++.+.+++....  +..+..+   .+.+.++.    .+.|+|+++++
T Consensus        18 kilvlGaG~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~~~~~--~~~d~~d---~~~l~~~~----~~~DvVi~~~p   86 (365)
T 3abi_A           18 KVLILGAGNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKEFATP--LKVDASN---FDKLVEVM----KEFELVIGALP   86 (365)
T ss_dssp             EEEEECCSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTTTSEE--EECCTTC---HHHHHHHH----TTCSEEEECCC
T ss_pred             EEEEECCCHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhccCCc--EEEecCC---HHHHHHHH----hCCCEEEEecC
Confidence            69999999999999988754 34 577888888888877654322  2222222   22344443    47899999999


Q ss_pred             cHHHHHHHHHHhccCCEEEEEcCC
Q 017426          272 LNKTMSTALGATCAGGKVCLVGMG  295 (372)
Q Consensus       272 ~~~~~~~~~~~l~~~G~~v~~g~~  295 (372)
                      .......+-.++..+=+++.++..
T Consensus        87 ~~~~~~v~~~~~~~g~~yvD~s~~  110 (365)
T 3abi_A           87 GFLGFKSIKAAIKSKVDMVDVSFM  110 (365)
T ss_dssp             GGGHHHHHHHHHHHTCEEEECCCC
T ss_pred             CcccchHHHHHHhcCcceEeeecc
Confidence            754445555667777778877643

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.57  E-value=0.0083  Score=53.04  Aligned_cols=81  Identities=23%  Similarity=0.285  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCCe-EEecCCCcc-cHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GADN-IVKVSTNLQ-DIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-v~~~~~~~~-~~~~~~~~~~~~~~~  261 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+++++++++.+.+ +++   +... .+..|-.+. +..+.+.+..+. .+
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g   84 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR-FG   84 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            4678999987 9999999999999999 588888888765543 343   3222 122222222 233333333322 35


Q ss_pred             cceEEEeCCC
Q 017426          262 GIDVSFDCAG  271 (372)
Q Consensus       262 ~~d~vid~~g  271 (372)
                      ++|++|++.|
T Consensus        85 ~iD~lvnnAg   94 (280)
T 3tox_A           85 GLDTAFNNAG   94 (280)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            8999999887

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.56  E-value=0.017  Score=50.94  Aligned_cols=83  Identities=18%  Similarity=0.190  Sum_probs=52.0

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017426          188 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GADN-IVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       188 ~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      ..+.++||+|+ +++|.++++.+...|+ .|+++++++++.+.+ +++   +... .+..|-.+ ++..+.+.+..+. .
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~   99 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVER-F   99 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            35779999987 9999999999999999 578888887765533 333   4322 22223222 2333344443332 3


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus       100 g~id~lv~nAg~  111 (279)
T 3sju_A          100 GPIGILVNSAGR  111 (279)
T ss_dssp             CSCCEEEECCCC
T ss_pred             CCCcEEEECCCC
Confidence            589999998874

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=96.56  E-value=0.017  Score=49.91  Aligned_cols=82  Identities=20%  Similarity=0.215  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh-hHHH-HHHHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCCcc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD-YRLS-VAKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~-~~~~-~~~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~~  263 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++ ++.+ .+++.+... .+..|-.+ +++.+.+.+..+. .+++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~i   83 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVIST-FGRC   83 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH-cCCC
Confidence            4678999997 9999999999999999 577777776 5443 345555332 22233222 2333333333322 2589


Q ss_pred             eEEEeCCCc
Q 017426          264 DVSFDCAGL  272 (372)
Q Consensus       264 d~vid~~g~  272 (372)
                      |++|++.|.
T Consensus        84 d~lv~nAg~   92 (249)
T 2ew8_A           84 DILVNNAGI   92 (249)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998873

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.55  E-value=0.0034  Score=53.74  Aligned_cols=102  Identities=22%  Similarity=0.251  Sum_probs=67.5

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh----CCCe-EEecCCCcccHHHHHHHHHHHcC
Q 017426          186 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GADN-IVKVSTNLQDIAEEVEKIQKAMG  260 (372)
Q Consensus       186 ~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l----g~~~-v~~~~~~~~~~~~~~~~~~~~~~  260 (372)
                      ...++.+||-.|+| .|..+..+++..+...+++++.+++..+.+++.    |... +.....   +..+.+....  ..
T Consensus        51 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~~~~~~--~~  124 (233)
T 2gpy_A           51 KMAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFG---DALQLGEKLE--LY  124 (233)
T ss_dssp             HHHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS---CGGGSHHHHT--TS
T ss_pred             hccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC---CHHHHHHhcc--cC
Confidence            34578899999987 688888999887434799999999988777653    5422 221111   2211111110  13


Q ss_pred             CcceEEEeCCCc---HHHHHHHHHHhccCCEEEEEc
Q 017426          261 TGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       261 ~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      +.||+||.....   ...+..+.+.|+++|.++...
T Consensus       125 ~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  160 (233)
T 2gpy_A          125 PLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDN  160 (233)
T ss_dssp             CCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred             CCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence            679999865443   356778888999999988753

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.55  E-value=0.024  Score=49.71  Aligned_cols=83  Identities=14%  Similarity=0.215  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HH---hCCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |++|.++++.+...|+ .|+++++++++.+.+ ++   .+... .+..|-.+ ++..+.+.+..+...+
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   98 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   98 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 9999999999999999 578888887665432 22   24322 22223222 2333334443332226


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus        99 ~id~lv~nAg~  109 (273)
T 1ae1_A           99 KLNILVNNAGV  109 (273)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            89999998874

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=96.55  E-value=0.015  Score=52.38  Aligned_cols=81  Identities=12%  Similarity=0.206  Sum_probs=53.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HH---hCC---CeEEecCCCc-ccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGA---DNIVKVSTNL-QDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~---lg~---~~v~~~~~~~-~~~~~~~~~~~~~~  259 (372)
                      .+.++||+|+ |++|.++++.+...|+ .|+++++++++.+.+ +.   .+.   ..++..|-.+ .++.+.+..+.+ .
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~   84 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA-R   84 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH-h
Confidence            4678999998 9999999999999999 578888888765533 22   232   1223333222 334444444433 2


Q ss_pred             CCcceEEEeCCC
Q 017426          260 GTGIDVSFDCAG  271 (372)
Q Consensus       260 ~~~~d~vid~~g  271 (372)
                      .+++|++|++.|
T Consensus        85 ~g~id~lv~nAg   96 (319)
T 3ioy_A           85 FGPVSILCNNAG   96 (319)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence            468999999988

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=96.54  E-value=0.015  Score=50.70  Aligned_cols=82  Identities=13%  Similarity=0.072  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH---HHhCCC-eEEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA---KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~---~~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      .|+.+||+|+ +++|.++++.+...|+ .|+++++++++.+.+   .+.+.. ..+..|-.+ .+..+.+.+..+. -++
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~-~G~   83 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIAT-FGR   83 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH-HSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHH-hCC
Confidence            4788999987 9999999999999999 567776766544333   334432 223333222 3333444444332 368


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|+++++.|.
T Consensus        84 iDiLVNnAGi   93 (258)
T 4gkb_A           84 LDGLVNNAGV   93 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998874

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.54  E-value=0.012  Score=51.68  Aligned_cols=82  Identities=22%  Similarity=0.237  Sum_probs=53.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCeEEecCCCc-ccHHHHHHHHHHHcCCcceE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~  265 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+.+ +++.....+..|-.+ ++..+.+.+..+. .+++|+
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD~   85 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRR-FGRLDC   85 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH-HSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            4678999987 9999999999999999 577888887766544 344322233333222 2333333333322 357999


Q ss_pred             EEeCCCc
Q 017426          266 SFDCAGL  272 (372)
Q Consensus       266 vid~~g~  272 (372)
                      +|++.|.
T Consensus        86 lv~nAg~   92 (270)
T 1yde_A           86 VVNNAGH   92 (270)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9998763

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=96.53  E-value=0.0095  Score=52.21  Aligned_cols=82  Identities=24%  Similarity=0.345  Sum_probs=54.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCCCeE-EecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGADNI-VKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~~~v-~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+++++++++.+. .++++.... +..|-.+ .+..+.+.+..+. .+++|
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD  103 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAERE-MEGID  103 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHH-HTSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHH-cCCCC
Confidence            4678999987 9999999999999999 57777788776554 456664332 2223222 2233333333322 35899


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|++.|.
T Consensus       104 ~lvnnAg~  111 (266)
T 3grp_A          104 ILVNNAGI  111 (266)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998874

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.53  E-value=0.01  Score=51.66  Aligned_cols=82  Identities=17%  Similarity=0.201  Sum_probs=47.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCCC-eEEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      .+.++||+|+ +++|.++++.+...|+ .|+++++++++.+ ..++++.. ..+..|-.+ ++..+.+.+..+. .+++|
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~id   83 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQE-FGHVH   83 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4678999987 9999999999999999 5777777766544 33445422 223233222 2333334333322 35899


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|++.|.
T Consensus        84 ~lv~nAg~   91 (257)
T 3tpc_A           84 GLVNCAGT   91 (257)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998773

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.53  E-value=0.023  Score=51.72  Aligned_cols=131  Identities=16%  Similarity=0.216  Sum_probs=81.5

Q ss_pred             CEEEEECCCHHHHHHHHHHH-H-cCCCeEEEEecChhHHH-HHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          191 TNVLIMGAGPIGLVTMLAAR-A-FGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~-~-~g~~~vv~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      -+|.|+|+|.+|...++.++ . .+++.+.+.++++++.+ +++++|...+.      .++    .++.+  ...+|+|+
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~------~~~----~~~l~--~~~~D~V~   76 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTY------TNY----KDMID--TENIDAIF   76 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEE------SCH----HHHHT--TSCCSEEE
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCccc------CCH----HHHhc--CCCCCEEE
Confidence            47899999999998888776 4 46655566788887765 45667875432      122    22321  24799999


Q ss_pred             eCCCcHHHHHHHHHHhccCCEEEEEcCCCCCcccc-chhh----hcc-CcEEEeec--cCCCcHHHHHHHHHcCCC
Q 017426          268 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP-LTPA----AVR-EVDVVGVF--RYKNTWPLCLELLRSGKI  335 (372)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~----~~~-~~~i~~~~--~~~~~~~~~~~ll~~g~~  335 (372)
                      .|+....+.+.+..+|+. |+.+.+.- +...+.. ...+    -.+ ++.+.-..  .+...+..+.+++++|.+
T Consensus        77 i~tp~~~h~~~~~~al~~-G~~v~~eK-p~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~p~~~~~~~~i~~g~i  150 (346)
T 3cea_A           77 IVAPTPFHPEMTIYAMNA-GLNVFCEK-PLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIVDNGDI  150 (346)
T ss_dssp             ECSCGGGHHHHHHHHHHT-TCEEEECS-CCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTCHHHHHHHHHHHTTTT
T ss_pred             EeCChHhHHHHHHHHHHC-CCEEEEcC-CCCCCHHHHHHHHHHHHhCCCCeEEEecccccCHHHHHHHHHHHcCCC
Confidence            999987778888888876 55555532 1111111 1111    123 33333222  225568888999999887

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=96.53  E-value=0.014  Score=51.05  Aligned_cols=82  Identities=32%  Similarity=0.350  Sum_probs=53.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HH----hCCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE----IGADN-IVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~----lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+++++++++.+.+ ++    .+... .+..|-.+ ++..+.+.++.+. .
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   96 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA-F   96 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-c
Confidence            4678999987 9999999999999999 578888887765433 22    34322 22233222 3344444444332 3


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus        97 g~id~lv~nAg~  108 (266)
T 4egf_A           97 GGLDVLVNNAGI  108 (266)
T ss_dssp             TSCSEEEEECCC
T ss_pred             CCCCEEEECCCc
Confidence            589999998763

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=96.52  E-value=0.014  Score=50.30  Aligned_cols=82  Identities=18%  Similarity=0.168  Sum_probs=52.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhC---CCeEEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIG---ADNIVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg---~~~v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+.+ +.+.   -...+..|-.+ +++.+.+.++.+. .++
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   82 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKA-FGP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH-HSS
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHH-hCC
Confidence            4678999988 9999999999999999 577787887665533 4443   11223333222 2333333333322 257


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|++|++.|.
T Consensus        83 id~li~~Ag~   92 (251)
T 1zk4_A           83 VSTLVNNAGI   92 (251)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998863

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.52  E-value=0.011  Score=51.23  Aligned_cols=101  Identities=15%  Similarity=0.200  Sum_probs=70.6

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCC----eEEecCCCcccHHHHHHHHHH
Q 017426          182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD----NIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       182 l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~----~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      ++...++++.+||-.|+| .|..+..+++..+. .+++++.+++..+.+++....    .++..+....++         
T Consensus        48 ~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~---------  116 (266)
T 3ujc_A           48 LSDIELNENSKVLDIGSG-LGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEF---------  116 (266)
T ss_dssp             TTTCCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCC---------
T ss_pred             HHhcCCCCCCEEEEECCC-CCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCC---------
Confidence            355678899999999987 58888888887776 799999999999988876432    122211111110         


Q ss_pred             HcCCcceEEEeCCCc--------HHHHHHHHHHhccCCEEEEEcC
Q 017426          258 AMGTGIDVSFDCAGL--------NKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       258 ~~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                       ..+.+|+|+....-        ...+..+.+.|+|+|.++....
T Consensus       117 -~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  160 (266)
T 3ujc_A          117 -PENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY  160 (266)
T ss_dssp             -CTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             -CCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence             14679999875321        1346778889999999988753

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=96.52  E-value=0.016  Score=50.89  Aligned_cols=82  Identities=20%  Similarity=0.198  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH----HHhCCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ +++|.++++.+...|+ .|+++++++++.+.+    ++.+.. ..+..|-.+ .+..+.+.+..+. .+
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g  104 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKE-FG  104 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHH-cC
Confidence            4678999987 9999999999999999 578888887765433    233422 223233222 2333344433332 35


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus       105 ~iD~lvnnAg~  115 (270)
T 3ftp_A          105 ALNVLVNNAGI  115 (270)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            89999998873

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.52  E-value=0.0088  Score=51.64  Aligned_cols=79  Identities=18%  Similarity=0.320  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+.+.++.-...+..|-.+.+   .+.+..+. .+++|++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~-~~~id~lv   79 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKKK---QIDQFANE-VERLDVLF   79 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCHH---HHHHHHHH-CSCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhccCceEEEeeCCCHH---HHHHHHHH-hCCCCEEE
Confidence            4678999987 9999999999999998 57888888776554333321122223322222   23233221 35899999


Q ss_pred             eCCCc
Q 017426          268 DCAGL  272 (372)
Q Consensus       268 d~~g~  272 (372)
                      ++.|.
T Consensus        80 ~~Ag~   84 (246)
T 2ag5_A           80 NVAGF   84 (246)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            98873

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.51  E-value=0.018  Score=50.13  Aligned_cols=81  Identities=22%  Similarity=0.244  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCC-eEEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+.+ +.+... ..+..|-.+ .++.+.+.+..+. .+++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~iD   83 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTA-FGGLH   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4678999998 9999999999989999 577777887765543 344321 222223222 2333444433332 25799


Q ss_pred             EEEeCCC
Q 017426          265 VSFDCAG  271 (372)
Q Consensus       265 ~vid~~g  271 (372)
                      ++|++.|
T Consensus        84 ~lv~~Ag   90 (260)
T 1nff_A           84 VLVNNAG   90 (260)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999887

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=96.51  E-value=0.02  Score=49.85  Aligned_cols=82  Identities=26%  Similarity=0.374  Sum_probs=52.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+.+ +++   +... .+..|-.+ .+..+.+.+..+. .+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g   83 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD-FG   83 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-hC
Confidence            4678999987 9999999999999999 577777887665433 332   4322 22223222 2333334333322 25


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus        84 ~id~lv~nAg~   94 (262)
T 1zem_A           84 KIDFLFNNAGY   94 (262)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998763

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=96.51  E-value=0.014  Score=50.69  Aligned_cols=82  Identities=20%  Similarity=0.292  Sum_probs=53.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+. .++++... .+..|-.+ +++.+.+.+..+. .+++|
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~id   82 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRR-LGTLN   82 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHH-HCSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4678999987 9999999999999999 57888888776554 34555332 22223222 2333334433322 25799


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|++.|.
T Consensus        83 ~lv~~Ag~   90 (253)
T 1hxh_A           83 VLVNNAGI   90 (253)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998873

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=96.51  E-value=0.027  Score=47.47  Aligned_cols=96  Identities=19%  Similarity=0.139  Sum_probs=60.7

Q ss_pred             CEEEEECC-CHHHHHHHHHHH-HcCCCeEEEEecChh-HHHHHHHhCCC-eEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          191 TNVLIMGA-GPIGLVTMLAAR-AFGAPRIVIVDVDDY-RLSVAKEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~-~~g~~~vv~v~~~~~-~~~~~~~lg~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .+|||+|+ |.+|..+++.+. ..|+ .|+++.++++ +.+.+...+.. .++..|-.  + .+.+.+..    .++|++
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~--d-~~~~~~~~----~~~d~v   77 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDHERVTVIEGSFQ--N-PGXLEQAV----TNAEVV   77 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTSTTEEEEECCTT--C-HHHHHHHH----TTCSEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCCCceEEEECCCC--C-HHHHHHHH----cCCCEE
Confidence            46999997 999999998888 8999 5788888877 65544322322 22222222  2 23344443    478999


Q ss_pred             EeCCCcHHH-HHHHHHHhccC--CEEEEEcC
Q 017426          267 FDCAGLNKT-MSTALGATCAG--GKVCLVGM  294 (372)
Q Consensus       267 id~~g~~~~-~~~~~~~l~~~--G~~v~~g~  294 (372)
                      |++.|.... ...+++.+...  ++++.++.
T Consensus        78 v~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs  108 (221)
T 3r6d_A           78 FVGAMESGSDMASIVKALSRXNIRRVIGVSM  108 (221)
T ss_dssp             EESCCCCHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             EEcCCCCChhHHHHHHHHHhcCCCeEEEEee
Confidence            999986211 34555555433  58887763

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=96.51  E-value=0.011  Score=52.04  Aligned_cols=82  Identities=17%  Similarity=0.116  Sum_probs=53.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCC-eEEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|++++++.++.+.+ +.++.. ..+..|-.+ .++.+.+.++.+. .+++|
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~g~id   81 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLAR-YGRVD   81 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHH-HSCCS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHh-CCCCC
Confidence            3578999987 9999999999999999 577777877665543 445432 223333222 2333334433332 35799


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|++.|.
T Consensus        82 ~lv~~Ag~   89 (281)
T 3m1a_A           82 VLVNNAGR   89 (281)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99998873

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.50  E-value=0.023  Score=49.40  Aligned_cols=82  Identities=13%  Similarity=0.191  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+.+ +++   +... .+..|-.+ ++..+.+.+..+..++
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999997 9999999999999999 577787887665432 322   4321 22223222 2333444444332226


Q ss_pred             cceEEEeCCC
Q 017426          262 GIDVSFDCAG  271 (372)
Q Consensus       262 ~~d~vid~~g  271 (372)
                      ++|++|++.|
T Consensus        87 ~id~lv~~Ag   96 (260)
T 2ae2_A           87 KLNILVNNAG   96 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            8999999887

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=96.49  E-value=0.014  Score=50.84  Aligned_cols=83  Identities=17%  Similarity=0.203  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HH---hCCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |++|.++++.+...|+++++...+++++.+.+ ++   .+... .+..|-.+ .+..+.+.+..+. .+
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g   81 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDET-FG   81 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            4678999987 99999999999999995443347777655433 22   34322 22233222 2333334443332 35


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus        82 ~id~lv~nAg~   92 (258)
T 3oid_A           82 RLDVFVNNAAS   92 (258)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            89999998863

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.48  E-value=0.0093  Score=52.26  Aligned_cols=81  Identities=19%  Similarity=0.174  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCc-ccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .+.++||+|+ |++|.++++.+...|++ |++++++.++.+.+..-.. ..+..|-.+ .+..+.+.+..+. .+++|++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD~l   91 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHP-LLLLARRVERLKALNLPNT-LCAQVDVTDKYTFDTAITRAEKI-YGPADAI   91 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCHHHHHTTCCTTE-EEEECCTTCHHHHHHHHHHHHHH-HCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHhhcCCc-eEEEecCCCHHHHHHHHHHHHHH-CCCCCEE
Confidence            3678999997 99999999999999995 7777787766543221111 122223222 2333344433332 3589999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      |++.|.
T Consensus        92 vnnAg~   97 (266)
T 3p19_A           92 VNNAGM   97 (266)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            998874

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.47  E-value=0.013  Score=50.14  Aligned_cols=81  Identities=22%  Similarity=0.194  Sum_probs=51.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-H----HhCCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K----EIGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~----~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      +.++||+|+ |++|.++++.+...|+ .|+.+.++.++.+.+ +    ..+... .+..|-.+ .+..+.+.++.+. .+
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g   79 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLER-FG   79 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHH-HS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHh-cC
Confidence            578999987 9999999999999999 578888887765433 2    334332 22223222 2233333333222 25


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus        80 ~id~li~~Ag~   90 (235)
T 3l77_A           80 DVDVVVANAGL   90 (235)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            89999998874

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=96.47  E-value=0.017  Score=50.60  Aligned_cols=82  Identities=23%  Similarity=0.264  Sum_probs=53.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+++++++++.+ ..++++... .+..|-.+ .+..+.+.+..+. .+++|
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~id   87 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDT-FGRLD   87 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4678999987 9999999999999999 5777777776654 445565332 22233222 2333344433332 35899


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      +++++.|.
T Consensus        88 ~lv~nAg~   95 (271)
T 3tzq_B           88 IVDNNAAH   95 (271)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998763

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=96.47  E-value=0.024  Score=50.02  Aligned_cols=82  Identities=20%  Similarity=0.255  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEec-ChhHHHH-HHHh----CCCe-EEecCCCc-ccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLSV-AKEI----GADN-IVKVSTNL-QDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~-~~~~~~~-~~~l----g~~~-v~~~~~~~-~~~~~~~~~~~~~~  259 (372)
                      .+.++||+|+ +++|.++++.+...|+ .|+++++ ++++.+. .+.+    +... .+..|-.+ .+..+.+.++.+ .
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~-~  101 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD-R  101 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH-H
Confidence            3678999987 9999999999999999 5777766 4444333 2222    2221 22222222 233334444333 2


Q ss_pred             CCcceEEEeCCCc
Q 017426          260 GTGIDVSFDCAGL  272 (372)
Q Consensus       260 ~~~~d~vid~~g~  272 (372)
                      .+++|++|++.|.
T Consensus       102 ~g~iD~lv~nAg~  114 (281)
T 3v2h_A          102 FGGADILVNNAGV  114 (281)
T ss_dssp             TSSCSEEEECCCC
T ss_pred             CCCCCEEEECCCC
Confidence            4689999998874

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.47  E-value=0.02  Score=49.24  Aligned_cols=82  Identities=22%  Similarity=0.314  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-H----hCCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-E----IGADN-IVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~----lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ |.+|..+++.+...|+ .|+++++++++.+.+. .    .+... .+..|-.+ .++.+.+.++.+ ..
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~   83 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYN-LV   83 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHH-hc
Confidence            4678999987 9999999999989998 5777878876654332 2    34322 22223222 233344444333 23


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus        84 ~~~d~vi~~Ag~   95 (248)
T 2pnf_A           84 DGIDILVNNAGI   95 (248)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            589999998873

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=96.47  E-value=0.019  Score=49.70  Aligned_cols=83  Identities=23%  Similarity=0.280  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh--hHHHHHHHh--CCC-eEEecCCCc--ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD--YRLSVAKEI--GAD-NIVKVSTNL--QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~--~~~~~~~~l--g~~-~v~~~~~~~--~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ |.+|.++++.+...|+++|+++++++  +..+.+.+.  +.. ..+..|-.+  .+..+.+.++.+. .
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   82 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ-L   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH-H
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh-c
Confidence            3678999987 99999999999999996466666665  333333333  211 122233322  2344444444332 2


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus        83 g~id~lv~~Ag~   94 (254)
T 1sby_A           83 KTVDILINGAGI   94 (254)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            579999998873

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=96.46  E-value=0.024  Score=49.23  Aligned_cols=81  Identities=20%  Similarity=0.263  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---C--------CCeEEecCCCc-ccHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---G--------ADNIVKVSTNL-QDIAEEVEK  254 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g--------~~~v~~~~~~~-~~~~~~~~~  254 (372)
                      .+.++||+|+ |.+|..+++.+...|+ .|+++++++++.+.+ +.+   +        -...+..|-.+ +++.+.+..
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ   84 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence            4678999998 9999999999989998 577887887765543 322   1        11223233222 233334443


Q ss_pred             HHHHcCCcc-eEEEeCCC
Q 017426          255 IQKAMGTGI-DVSFDCAG  271 (372)
Q Consensus       255 ~~~~~~~~~-d~vid~~g  271 (372)
                      ..+. .+++ |++|++.|
T Consensus        85 ~~~~-~g~i~d~vi~~Ag  101 (264)
T 2pd6_A           85 VQAC-FSRPPSVVVSCAG  101 (264)
T ss_dssp             HHHH-HSSCCSEEEECCC
T ss_pred             HHHH-hCCCCeEEEECCC
Confidence            3322 2456 99999887

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.46  E-value=0.026  Score=50.11  Aligned_cols=81  Identities=16%  Similarity=0.207  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh----CCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GADN-IVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~-v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+.+ +++    +... .+..|-.+ +++.+.+.+..+ ..
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~  102 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK-VA  102 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH-HT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHH-Hc
Confidence            4678999998 9999999999999998 577787887665432 222    4322 22233222 233334443332 24


Q ss_pred             CcceEEEeCCC
Q 017426          261 TGIDVSFDCAG  271 (372)
Q Consensus       261 ~~~d~vid~~g  271 (372)
                      +.+|++|++.|
T Consensus       103 g~id~li~~Ag  113 (302)
T 1w6u_A          103 GHPNIVINNAA  113 (302)
T ss_dssp             CSCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            58999999887

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=96.45  E-value=0.014  Score=51.32  Aligned_cols=82  Identities=24%  Similarity=0.411  Sum_probs=53.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HH---hCCCeE-EecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGADNI-VKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~v-~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+++++++++.+.+ ++   .+.... +..|-.+ ++..+.+.++.+ ..+
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g  102 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDE-QGI  102 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH-HTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-HCC
Confidence            4678999987 9999999999999999 578888887765433 22   343322 2222222 233334444333 246


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|+++++.|.
T Consensus       103 ~iD~lv~nAg~  113 (271)
T 4ibo_A          103 DVDILVNNAGI  113 (271)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            89999998873

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.44  E-value=0.029  Score=49.96  Aligned_cols=101  Identities=13%  Similarity=0.164  Sum_probs=70.8

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh----CCC-eEEecCCCcccHHHHHHHHH
Q 017426          182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GAD-NIVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       182 l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~v~~~~~~~~~~~~~~~~~~  256 (372)
                      ++...++++++||-+|+|. |..+..+++..|. .|++++.+++..+.+++.    |.. .+....   .++.    ++ 
T Consensus        65 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~---~d~~----~~-  134 (302)
T 3hem_A           65 LDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI---QGWE----EF-  134 (302)
T ss_dssp             HHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEE---CCGG----GC-
T ss_pred             HHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE---CCHH----Hc-
Confidence            3557789999999999875 8888999998886 799999999887776653    433 121111   1211    11 


Q ss_pred             HHcCCcceEEEeCCC-----c----------HHHHHHHHHHhccCCEEEEEcCC
Q 017426          257 KAMGTGIDVSFDCAG-----L----------NKTMSTALGATCAGGKVCLVGMG  295 (372)
Q Consensus       257 ~~~~~~~d~vid~~g-----~----------~~~~~~~~~~l~~~G~~v~~g~~  295 (372)
                         .+.+|+|+....     .          ...+..+.+.|+|+|+++.....
T Consensus       135 ---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  185 (302)
T 3hem_A          135 ---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT  185 (302)
T ss_dssp             ---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred             ---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence               368999986321     1          24677888999999999987643

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.44  E-value=0.018  Score=49.84  Aligned_cols=74  Identities=23%  Similarity=0.237  Sum_probs=49.2

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          188 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       188 ~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      -.+.++||+|+ |.+|.++++.+...|+ .|++++++++.   +++++....+ .|- ..+..+.+.++     .++|++
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~---~~~~~~~~~~-~D~-~~~~~~~~~~~-----~~iD~l   85 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEEL---LKRSGHRYVV-CDL-RKDLDLLFEKV-----KEVDIL   85 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHH---HHHTCSEEEE-CCT-TTCHHHHHHHS-----CCCSEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHH---HHhhCCeEEE-eeH-HHHHHHHHHHh-----cCCCEE
Confidence            35789999998 9999999999999999 57777787643   3445522222 222 22333333222     389999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      |++.|.
T Consensus        86 v~~Ag~   91 (249)
T 1o5i_A           86 VLNAGG   91 (249)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            998873

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=96.44  E-value=0.021  Score=49.76  Aligned_cols=81  Identities=20%  Similarity=0.194  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE-ecChhHHHHHHHh----CCC-eEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSVAKEI----GAD-NIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v-~~~~~~~~~~~~l----g~~-~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ +++|.++++.+...|++ |+++ .++++..+.+++.    +.. .++..|-.+ +++.+.+.++.+. .
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~   83 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYS-VTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH-F   83 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCE-EEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH-h
Confidence            3578999987 99999999999999995 5555 4555544444432    211 222233222 3334444444332 3


Q ss_pred             CcceEEEeCCC
Q 017426          261 TGIDVSFDCAG  271 (372)
Q Consensus       261 ~~~d~vid~~g  271 (372)
                      +++|++|++.|
T Consensus        84 g~id~lv~~Ag   94 (264)
T 3i4f_A           84 GKIDFLINNAG   94 (264)
T ss_dssp             SCCCEEECCCC
T ss_pred             CCCCEEEECCc
Confidence            58999999988

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.43  E-value=0.078  Score=40.77  Aligned_cols=77  Identities=22%  Similarity=0.282  Sum_probs=51.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH-hCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      +.+|+|+|+|.+|..+++.+...|. .|+++++++++.+.+.+ ++... +.-+..  +. +.+.+   ..-.++|+||.
T Consensus         4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~-~~~d~~--~~-~~l~~---~~~~~~d~vi~   75 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALV-INGDCT--KI-KTLED---AGIEDADMYIA   75 (140)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEE-EESCTT--SH-HHHHH---TTTTTCSEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcCcEE-EEcCCC--CH-HHHHH---cCcccCCEEEE
Confidence            3579999999999999999998997 58888888888776653 46532 221211  11 12221   11357999999


Q ss_pred             CCCcHH
Q 017426          269 CAGLNK  274 (372)
Q Consensus       269 ~~g~~~  274 (372)
                      +++...
T Consensus        76 ~~~~~~   81 (140)
T 1lss_A           76 VTGKEE   81 (140)
T ss_dssp             CCSCHH
T ss_pred             eeCCch
Confidence            998753

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=96.42  E-value=0.025  Score=48.98  Aligned_cols=81  Identities=23%  Similarity=0.443  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHH---hCCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKE---IGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~---lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+. .+.   .+.. ..+..|-.+ .++.+.+.++.+. .+
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   89 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ-EG   89 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH-cC
Confidence            4678999987 9999999999999998 57888787765432 222   3432 222233222 2333334333322 25


Q ss_pred             cceEEEeCCC
Q 017426          262 GIDVSFDCAG  271 (372)
Q Consensus       262 ~~d~vid~~g  271 (372)
                      ++|++|++.|
T Consensus        90 ~id~vi~~Ag   99 (260)
T 3awd_A           90 RVDILVACAG   99 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999876

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.42  E-value=0.01  Score=48.59  Aligned_cols=101  Identities=16%  Similarity=0.228  Sum_probs=65.3

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHHHc
Q 017426          184 RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       184 ~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      ...++++++||=.|+|. |..+..+++. +. .|++++.+++..+.+++    .+...+........++.    .+   .
T Consensus        17 ~~~~~~~~~vLDiGcG~-G~~~~~la~~-~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~----~~---~   86 (185)
T 3mti_A           17 AEVLDDESIVVDATMGN-GNDTAFLAGL-SK-KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLD----HY---V   86 (185)
T ss_dssp             HTTCCTTCEEEESCCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGG----GT---C
T ss_pred             HHhCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHH----hh---c
Confidence            35678999999988864 7778888877 65 79999999988776654    35433222111111111    11   2


Q ss_pred             CCcceEEEeCCCc-----------H----HHHHHHHHHhccCCEEEEEcC
Q 017426          260 GTGIDVSFDCAGL-----------N----KTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       260 ~~~~d~vid~~g~-----------~----~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      ...||+|+-..+.           .    ..+..+.+.|+|+|+++.+..
T Consensus        87 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  136 (185)
T 3mti_A           87 REPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY  136 (185)
T ss_dssp             CSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             cCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence            4679999855321           1    235677889999999987654

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.41  E-value=0.018  Score=50.13  Aligned_cols=81  Identities=22%  Similarity=0.330  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+ ..++++... .+..|-.+ +++.+.+.++.+. .+++|
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~id   88 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGK-FGRVD   88 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHH-CCCCC
Confidence            4678999998 9999999999999999 5777777765544 445555432 22233222 2333444433322 25899


Q ss_pred             EEEeCCC
Q 017426          265 VSFDCAG  271 (372)
Q Consensus       265 ~vid~~g  271 (372)
                      ++|++.|
T Consensus        89 ~li~~Ag   95 (265)
T 2o23_A           89 VAVNCAG   95 (265)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999876

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=96.41  E-value=0.017  Score=51.87  Aligned_cols=92  Identities=23%  Similarity=0.235  Sum_probs=63.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHH--cCCCeEEEEecChhH--HHHHHHhCCCeEEecCCCcccHHHHHHHHHH-HcCCcceE
Q 017426          191 TNVLIMGAGPIGLVTMLAARA--FGAPRIVIVDVDDYR--LSVAKEIGADNIVKVSTNLQDIAEEVEKIQK-AMGTGIDV  265 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~--~g~~~vv~v~~~~~~--~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~d~  265 (372)
                      -+|.|+|+|.+|...+..+..  .+++.+.++++++++  .++++.+|....  +    .+    +.++.+ +.+.++|+
T Consensus         5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~--~----~~----~e~ll~~~~~~~iDv   74 (312)
T 1nvm_B            5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTT--Y----AG----VEGLIKLPEFADIDF   74 (312)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEE--S----SH----HHHHHHSGGGGGEEE
T ss_pred             CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcc--c----CC----HHHHHhccCCCCCcE
Confidence            478999999999988888743  467666677777665  567778886521  1    12    222222 11257999


Q ss_pred             EEeCCCcHHHHHHHHHHhcc--CCEEEEE
Q 017426          266 SFDCAGLNKTMSTALGATCA--GGKVCLV  292 (372)
Q Consensus       266 vid~~g~~~~~~~~~~~l~~--~G~~v~~  292 (372)
                      ||++++...+.+.+...+..  +.+++..
T Consensus        75 V~~atp~~~h~~~a~~al~a~~Gk~Vi~e  103 (312)
T 1nvm_B           75 VFDATSASAHVQNEALLRQAKPGIRLIDL  103 (312)
T ss_dssp             EEECSCHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             EEECCChHHHHHHHHHHHHhCCCCEEEEc
Confidence            99999987777788888887  7776653

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=96.40  E-value=0.025  Score=49.35  Aligned_cols=83  Identities=16%  Similarity=0.161  Sum_probs=53.4

Q ss_pred             CCCCCEEEEECC---CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH----HhCCCeEEecCCCcc-cHHHHHHHHHHH
Q 017426          187 IGPETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQ-DIAEEVEKIQKA  258 (372)
Q Consensus       187 ~~~g~~vlI~Ga---g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~----~lg~~~v~~~~~~~~-~~~~~~~~~~~~  258 (372)
                      ..++.++||+|+   +++|.++++.+...|+ .|+++.++++..+.++    ..+....+..|-.+. +..+.+.++.+ 
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-   88 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT-   88 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH-
Confidence            356789999974   6899999999999999 5777777655444333    344333344443332 33344444433 


Q ss_pred             cCCcceEEEeCCC
Q 017426          259 MGTGIDVSFDCAG  271 (372)
Q Consensus       259 ~~~~~d~vid~~g  271 (372)
                      ..+++|++|++.|
T Consensus        89 ~~g~id~lv~nAg  101 (271)
T 3ek2_A           89 HWDSLDGLVHSIG  101 (271)
T ss_dssp             HCSCEEEEEECCC
T ss_pred             HcCCCCEEEECCc
Confidence            2468999999876

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=96.40  E-value=0.014  Score=49.70  Aligned_cols=80  Identities=26%  Similarity=0.255  Sum_probs=52.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCeEEecCCCc-ccHHHHHHHHHHHcCCcceEE
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      +.++||+|+ |.+|..+++.+...|+ .|+++++++++.+.+ ++++-...+..|-.+ +++.+.+.+..+. .+++|++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~l   82 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEA-FGELSAL   82 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHH-HSCCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            568999987 9999999999999998 577777887766543 344322333333222 2333334333322 2579999


Q ss_pred             EeCCC
Q 017426          267 FDCAG  271 (372)
Q Consensus       267 id~~g  271 (372)
                      |++.|
T Consensus        83 i~~Ag   87 (234)
T 2ehd_A           83 VNNAG   87 (234)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99887

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.39  E-value=0.026  Score=50.03  Aligned_cols=79  Identities=23%  Similarity=0.381  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCe-EEecCCCcccHHHHHHHHHHHcCCcceE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~d~  265 (372)
                      .|.++||+|+ |++|.++++.+...|+ .|+++++++++.+.+ ++++... .+..|-.  + .+.++++.+.. +++|+
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~--d-~~~v~~~~~~~-~~iD~   89 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMAGQVEVRELDLQ--D-LSSVRRFADGV-SGADV   89 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSSSEEEEEECCTT--C-HHHHHHHHHTC-CCEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCeeEEEcCCC--C-HHHHHHHHHhc-CCCCE
Confidence            5789999987 9999999999999998 578888888776654 3444221 2222222  2 22344444322 58999


Q ss_pred             EEeCCCc
Q 017426          266 SFDCAGL  272 (372)
Q Consensus       266 vid~~g~  272 (372)
                      +|++.|.
T Consensus        90 lv~nAg~   96 (291)
T 3rd5_A           90 LINNAGI   96 (291)
T ss_dssp             EEECCCC
T ss_pred             EEECCcC
Confidence            9998874

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=96.39  E-value=0.015  Score=50.66  Aligned_cols=83  Identities=19%  Similarity=0.300  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HH---hCCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+.+ ++   .+... .+..|-.+ .++.+.+.+..+..++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   91 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   91 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4678999987 9999999999999998 577777877654432 22   24322 22223222 2233333333322236


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus        92 ~id~li~~Ag~  102 (266)
T 1xq1_A           92 KLDILINNLGA  102 (266)
T ss_dssp             CCSEEEEECCC
T ss_pred             CCcEEEECCCC
Confidence            89999998874

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.38  E-value=0.026  Score=49.63  Aligned_cols=82  Identities=24%  Similarity=0.304  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecC------------hhHHH----HHHHhCCCe-EEecCCCc-ccHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD------------DYRLS----VAKEIGADN-IVKVSTNL-QDIA  249 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~------------~~~~~----~~~~lg~~~-v~~~~~~~-~~~~  249 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|++++++            .++.+    .++..+... .+..|-.+ ++..
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   87 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE   87 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            4679999987 9999999999999999 57777775            33222    233344332 22233222 2333


Q ss_pred             HHHHHHHHHcCCcceEEEeCCCc
Q 017426          250 EEVEKIQKAMGTGIDVSFDCAGL  272 (372)
Q Consensus       250 ~~~~~~~~~~~~~~d~vid~~g~  272 (372)
                      +.+.+..+. .+++|++|++.|.
T Consensus        88 ~~~~~~~~~-~g~id~lv~nAg~  109 (281)
T 3s55_A           88 SFVAEAEDT-LGGIDIAITNAGI  109 (281)
T ss_dssp             HHHHHHHHH-HTCCCEEEECCCC
T ss_pred             HHHHHHHHh-cCCCCEEEECCCC
Confidence            344443332 3589999998874

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=96.38  E-value=0.0096  Score=51.96  Aligned_cols=82  Identities=17%  Similarity=0.287  Sum_probs=52.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcC---CCeEEEEecChhHHHHHHHh---CCC-eEEecCCC-cccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFG---APRIVIVDVDDYRLSVAKEI---GAD-NIVKVSTN-LQDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g---~~~vv~v~~~~~~~~~~~~l---g~~-~v~~~~~~-~~~~~~~~~~~~~~~  259 (372)
                      .+.++||+|+ |.+|.++++.+...|   + .|++++++.++.+.++++   +.. .++..|-. .+++.+.+.++.+..
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   98 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   98 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence            4678999987 999999999999899   6 677777776544433332   322 22333322 234444444443322


Q ss_pred             CC-cceEEEeCCC
Q 017426          260 GT-GIDVSFDCAG  271 (372)
Q Consensus       260 ~~-~~d~vid~~g  271 (372)
                      +. ++|++|++.|
T Consensus        99 g~~~id~li~~Ag  111 (267)
T 1sny_A           99 KDQGLNVLFNNAG  111 (267)
T ss_dssp             GGGCCSEEEECCC
T ss_pred             CCCCccEEEECCC
Confidence            22 7999999887

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=96.37  E-value=0.019  Score=49.28  Aligned_cols=79  Identities=28%  Similarity=0.232  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      ++.++||+|+ |.+|.++++.+...|+ .|+++++++++.+.+ +++....++..|-.+.   +.+.++.+ ..+++|++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~-~~~~id~v   80 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGDW---EATERALG-SVGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCH---HHHHHHHT-TCCCCCEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCH---HHHHHHHH-HcCCCCEE
Confidence            4678999998 9999999999999998 577787887766543 3343223333332222   23443332 13579999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      |++.|.
T Consensus        81 i~~Ag~   86 (244)
T 3d3w_A           81 VNNAAV   86 (244)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            998873

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=96.37  E-value=0.016  Score=50.72  Aligned_cols=82  Identities=20%  Similarity=0.241  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEec-ChhHHHHH----HHhCCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLSVA----KEIGADN-IVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~-~~~~~~~~----~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ +++|.++++.+...|++ |+++.+ ++++.+.+    ++.+... .+..|-.+ ++..+.+.++.+. .
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~-~  104 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAK-VAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER-W  104 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            4678999987 99999999999999995 555555 55544332    2334332 22233222 2333334433332 3


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus       105 g~id~lv~nAg~  116 (269)
T 4dmm_A          105 GRLDVLVNNAGI  116 (269)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            589999998764

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.37  E-value=0.016  Score=51.14  Aligned_cols=79  Identities=20%  Similarity=0.202  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH----HHhCCCe--EEecCCCcc-cHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN--IVKVSTNLQ-DIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~----~~lg~~~--v~~~~~~~~-~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ |++|.++++.+...|+ .|+++++++++.+.+    ++.+...  .+..|-.+. +..+.+.+..+. .
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-~  104 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL-M  104 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH-c
Confidence            3678999998 9999999999999998 578888887765543    2234322  222332222 233333333222 2


Q ss_pred             CcceEEEeC
Q 017426          261 TGIDVSFDC  269 (372)
Q Consensus       261 ~~~d~vid~  269 (372)
                      +++|++|++
T Consensus       105 g~iD~li~n  113 (286)
T 1xu9_A          105 GGLDMLILN  113 (286)
T ss_dssp             TSCSEEEEC
T ss_pred             CCCCEEEEC
Confidence            589999987

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=96.37  E-value=0.016  Score=49.92  Aligned_cols=81  Identities=17%  Similarity=0.232  Sum_probs=53.7

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCeE-EecCCCcccHHHHHHHHHHHcCCcc
Q 017426          187 IGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNI-VKVSTNLQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       187 ~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~v-~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      -.++.++||+|+ |.+|.++++.+...|+ .|+++++++++.+.+ +.+..... +..+-.+   .+.+.++.+. -+++
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~-~~~i   85 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKDNYTIEVCNLAN---KEECSNLISK-TSNL   85 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTS---HHHHHHHHHT-CSCC
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhccCccEEEcCCCC---HHHHHHHHHh-cCCC
Confidence            356889999987 9999999999999998 578888888776654 44543322 2222222   2234443332 2579


Q ss_pred             eEEEeCCCc
Q 017426          264 DVSFDCAGL  272 (372)
Q Consensus       264 d~vid~~g~  272 (372)
                      |++|++.|.
T Consensus        86 d~li~~Ag~   94 (249)
T 3f9i_A           86 DILVCNAGI   94 (249)
T ss_dssp             SEEEECCC-
T ss_pred             CEEEECCCC
Confidence            999998874

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.36  E-value=0.012  Score=48.71  Aligned_cols=103  Identities=17%  Similarity=0.246  Sum_probs=67.8

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHH----hCC-CeEEecCCCcccHHHHHHHHHH
Q 017426          184 RANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGA-DNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       184 ~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~----lg~-~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      ...++++++||-.|+|. |..+..+++..+ ...+++++.+++..+.+++    .|. ..+.....+-.++.       .
T Consensus        17 ~~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------~   88 (197)
T 3eey_A           17 KMFVKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMD-------K   88 (197)
T ss_dssp             HHHCCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGG-------G
T ss_pred             HhcCCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHh-------h
Confidence            34578899999998865 788888888864 2379999999988777655    343 22221111111111       1


Q ss_pred             HcCCcceEEEeCCCc---------------HHHHHHHHHHhccCCEEEEEcC
Q 017426          258 AMGTGIDVSFDCAGL---------------NKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       258 ~~~~~~d~vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      ...+.+|+|+...+.               ...+..+.+.|+++|+++....
T Consensus        89 ~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  140 (197)
T 3eey_A           89 YIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY  140 (197)
T ss_dssp             TCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             hccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence            124679999865422               2467889999999999987653

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=96.35  E-value=0.021  Score=49.18  Aligned_cols=82  Identities=20%  Similarity=0.318  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEec-ChhHHHHH-H---HhCCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLSVA-K---EIGADN-IVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~-~~~~~~~~-~---~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++.+ ++++.+.+ +   ..+... .+..|-.+ +++.+.+.+..+. .
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   80 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDV-F   80 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            3678999987 9999999999999999 4666666 66554432 2   234322 22233222 2333444433322 2


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus        81 g~id~lv~nAg~   92 (246)
T 2uvd_A           81 GQVDILVNNAGV   92 (246)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            579999998873

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=96.35  E-value=0.016  Score=49.98  Aligned_cols=81  Identities=22%  Similarity=0.333  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCCC--eEEecCCCc-ccHHHHHHHHHHHcCCcc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGAD--NIVKVSTNL-QDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~~--~v~~~~~~~-~~~~~~~~~~~~~~~~~~  263 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+. .++++..  ..+..|-.+ +++.+.+.+..+  .+++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~~i   86 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEA--VAPV   86 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHH--HSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHh--hCCC
Confidence            4678999998 9999999999999998 57788888776553 3445432  223233222 223333333322  2579


Q ss_pred             eEEEeCCCc
Q 017426          264 DVSFDCAGL  272 (372)
Q Consensus       264 d~vid~~g~  272 (372)
                      |++|++.|.
T Consensus        87 d~li~~Ag~   95 (254)
T 2wsb_A           87 SILVNSAGI   95 (254)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCcc
Confidence            999998873

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=96.35  E-value=0.021  Score=50.10  Aligned_cols=81  Identities=17%  Similarity=0.133  Sum_probs=50.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEec-ChhHHHHH-HHh----CCCe-EEecCCCcc-----cHHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLSVA-KEI----GADN-IVKVSTNLQ-----DIAEEVEKI  255 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~-~~~~~~~~-~~l----g~~~-v~~~~~~~~-----~~~~~~~~~  255 (372)
                      .+.++||+|+ |++|.++++.+...|+ .|+++++ ++++.+.+ +++    +... .+..|-.+.     ++.+.+.+.
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence            3678999987 9999999999999999 5777777 76654432 332    4322 222332222     333333333


Q ss_pred             HHHcCCcceEEEeCCC
Q 017426          256 QKAMGTGIDVSFDCAG  271 (372)
Q Consensus       256 ~~~~~~~~d~vid~~g  271 (372)
                      .+. .+++|++|++.|
T Consensus        89 ~~~-~g~id~lv~nAg  103 (276)
T 1mxh_A           89 FRA-FGRCDVLVNNAS  103 (276)
T ss_dssp             HHH-HSCCCEEEECCC
T ss_pred             HHh-cCCCCEEEECCC
Confidence            322 357999999887

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.35  E-value=0.024  Score=49.99  Aligned_cols=82  Identities=23%  Similarity=0.306  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HH---hCCC--e--EEecCCCc-ccHHHHHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGAD--N--IVKVSTNL-QDIAEEVEKIQKA  258 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~---lg~~--~--v~~~~~~~-~~~~~~~~~~~~~  258 (372)
                      .+.++||+|+ +.+|.++++.+...|+ .|+++++++++.+.+ ++   .+..  .  .+..|-.+ .+..+.+.+..+.
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            4678999987 9999999999999999 577888887765432 33   3321  2  22223222 2333344443332


Q ss_pred             cCCcceEEEeCCCc
Q 017426          259 MGTGIDVSFDCAGL  272 (372)
Q Consensus       259 ~~~~~d~vid~~g~  272 (372)
                       .+++|++|++.|.
T Consensus        89 -~g~id~lv~nAg~  101 (281)
T 3svt_A           89 -HGRLHGVVHCAGG  101 (281)
T ss_dssp             -HSCCCEEEECCCC
T ss_pred             -cCCCCEEEECCCc
Confidence             3589999998885

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=96.34  E-value=0.019  Score=49.52  Aligned_cols=82  Identities=18%  Similarity=0.253  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HH---hCCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |.+|..+++.+...|+ .|+++++++++.+.+ ++   .+... .+..|-.+ .++.+.+.+..+. .+
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   87 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK-LG   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh-cC
Confidence            4678999987 9999999999988998 577888887664432 22   34322 22233222 2233333333222 25


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus        88 ~~d~vi~~Ag~   98 (255)
T 1fmc_A           88 KVDILVNNAGG   98 (255)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            89999998763

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=96.34  E-value=0.029  Score=48.82  Aligned_cols=82  Identities=15%  Similarity=0.189  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE-ecChhHHHH-H---HHhCCC-eEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSV-A---KEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v-~~~~~~~~~-~---~~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .|.++||+|+ +++|.++++.+...|++ |+++ .+++++.+. .   ++.+.. ..+..|-.+ .+..+.+.+..+. .
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   84 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGAN-VVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK-F   84 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-h
Confidence            4678999987 99999999999999995 5555 555554332 2   233432 223333222 2333344443332 3


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus        85 g~id~lv~nAg~   96 (259)
T 3edm_A           85 GEIHGLVHVAGG   96 (259)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            589999998763

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=96.33  E-value=0.019  Score=50.01  Aligned_cols=82  Identities=27%  Similarity=0.344  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-C-HHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCC--eEEecCCCc-ccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-G-PIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD--NIVKVSTNL-QDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g-~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~--~v~~~~~~~-~~~~~~~~~~~~~~  259 (372)
                      .+.++||+|+ | ++|.++++.+...|+ .|+++++++++.+.+ +++   +..  ..+..|-.+ ++..+.+.++.+. 
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-   98 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK-   98 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH-
Confidence            4779999987 6 799999999989999 578888887765433 333   211  223233222 2333444444332 


Q ss_pred             CCcceEEEeCCCc
Q 017426          260 GTGIDVSFDCAGL  272 (372)
Q Consensus       260 ~~~~d~vid~~g~  272 (372)
                      .+++|++|++.|.
T Consensus        99 ~g~id~li~~Ag~  111 (266)
T 3o38_A           99 AGRLDVLVNNAGL  111 (266)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             hCCCcEEEECCCc
Confidence            3589999998873

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=96.33  E-value=0.027  Score=49.75  Aligned_cols=82  Identities=18%  Similarity=0.228  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |.+|..+++.+...|+ .|+++++++++.+.+ +.+   +... .+..|-.+ +++.+.+.++.+ ..+
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~-~~~  120 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT-EHK  120 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH-HCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHH-hcC
Confidence            3678999998 9999999999888898 466677776654432 332   4332 22223222 233334443332 245


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus       121 ~id~li~~Ag~  131 (285)
T 2c07_A          121 NVDILVNNAGI  131 (285)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998763

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=96.33  E-value=0.03  Score=49.16  Aligned_cols=82  Identities=20%  Similarity=0.232  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecC------------hhHHHH----HHHhCCCe-EEecCCCc-ccHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD------------DYRLSV----AKEIGADN-IVKVSTNL-QDIA  249 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~------------~~~~~~----~~~lg~~~-v~~~~~~~-~~~~  249 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|++++++            +++.+.    ++..+... .+..|-.+ .+..
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   90 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS   90 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            4789999987 9999999999999999 57777665            333332    23344332 22233222 2333


Q ss_pred             HHHHHHHHHcCCcceEEEeCCCc
Q 017426          250 EEVEKIQKAMGTGIDVSFDCAGL  272 (372)
Q Consensus       250 ~~~~~~~~~~~~~~d~vid~~g~  272 (372)
                      +.+.+..+. .+++|++|++.|.
T Consensus        91 ~~~~~~~~~-~g~id~lv~nAg~  112 (278)
T 3sx2_A           91 AALQAGLDE-LGRLDIVVANAGI  112 (278)
T ss_dssp             HHHHHHHHH-HCCCCEEEECCCC
T ss_pred             HHHHHHHHH-cCCCCEEEECCCC
Confidence            344443332 3589999998874

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=96.33  E-value=0.029  Score=49.50  Aligned_cols=82  Identities=18%  Similarity=0.167  Sum_probs=50.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecC----------------hhHHHHH----HHhCCCe-EEecCCCc-
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD----------------DYRLSVA----KEIGADN-IVKVSTNL-  245 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~----------------~~~~~~~----~~lg~~~-v~~~~~~~-  245 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|++++++                +++.+.+    +..+... .+..|-.+ 
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            4788999987 9999999999999999 57777665                4443322    2233322 22223222 


Q ss_pred             ccHHHHHHHHHHHcCCcceEEEeCCCc
Q 017426          246 QDIAEEVEKIQKAMGTGIDVSFDCAGL  272 (372)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~d~vid~~g~  272 (372)
                      ++..+.+.+..+. .+++|++|++.|.
T Consensus        89 ~~v~~~~~~~~~~-~g~id~lv~nAg~  114 (286)
T 3uve_A           89 DALKAAVDSGVEQ-LGRLDIIVANAGI  114 (286)
T ss_dssp             HHHHHHHHHHHHH-HSCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHH-hCCCCEEEECCcc
Confidence            2333344443332 3589999998873

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=96.33  E-value=0.028  Score=48.93  Aligned_cols=82  Identities=22%  Similarity=0.291  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHH-cCCCeEEEEecChhHHHH-HHHh---CC-CeEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARA-FGAPRIVIVDVDDYRLSV-AKEI---GA-DNIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~-~g~~~vv~v~~~~~~~~~-~~~l---g~-~~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ |.+|..+++.+.. .|+ .|+++.++.++.+. .+.+   +. ..++..|-.+ .++.+.+.++.+. .
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~   80 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKE-Y   80 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHh-c
Confidence            4678999987 9999999888888 898 57777787665442 2232   32 2233333222 2333344433322 2


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus        81 g~id~li~~Ag~   92 (276)
T 1wma_A           81 GGLDVLVNNAGI   92 (276)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            589999998763

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.32  E-value=0.02  Score=50.14  Aligned_cols=82  Identities=15%  Similarity=0.272  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHh----CCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI----GADN-IVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~l----g~~~-v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+. .+++    +... .+..|-.+ +++.+.+.+..+. .
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~   97 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK-F   97 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4678999997 9999999999999999 57777788766543 2333    5332 22223222 2333344433322 2


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus        98 g~iD~lvnnAg~  109 (267)
T 1vl8_A           98 GKLDTVVNAAGI  109 (267)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            579999998874

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=96.32  E-value=0.016  Score=50.23  Aligned_cols=80  Identities=21%  Similarity=0.230  Sum_probs=49.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH---hCCCe-EEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE---IGADN-IVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~---lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|++++++++ .+.+++   .+... .+..|-.+ +++.+.+.+..+. .++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~   79 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDP-APALAEIARHGVKAVHHPADLSDVAQIEALFALAERE-FGG   79 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCC-HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHH-HSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCch-HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHH-cCC
Confidence            3678999987 9999999999999999 5777777655 223333   34322 22222222 2333344433322 258


Q ss_pred             ceEEEeCCC
Q 017426          263 IDVSFDCAG  271 (372)
Q Consensus       263 ~d~vid~~g  271 (372)
                      +|++|++.|
T Consensus        80 id~lv~~Ag   88 (255)
T 2q2v_A           80 VDILVNNAG   88 (255)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.32  E-value=0.028  Score=50.42  Aligned_cols=84  Identities=17%  Similarity=0.170  Sum_probs=54.0

Q ss_pred             HHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecC---hhHHHH-HHHhC----CC-eEEecCCCcccHH
Q 017426          180 HACRRANI-GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD---DYRLSV-AKEIG----AD-NIVKVSTNLQDIA  249 (372)
Q Consensus       180 ~~l~~~~~-~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~---~~~~~~-~~~lg----~~-~v~~~~~~~~~~~  249 (372)
                      .+++...+ -.+.++||+|+|++|.+++..+...|++.|+++.++   .++.+. +++++    .. .++.+++    + 
T Consensus       143 ~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~----~-  217 (315)
T 3tnl_A          143 RALKEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIED----H-  217 (315)
T ss_dssp             HHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC----H-
T ss_pred             HHHHHcCCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccch----H-
Confidence            44554333 357899999999999999999999999778888888   555543 33332    21 2222221    1 


Q ss_pred             HHHHHHHHHcCCcceEEEeCCCc
Q 017426          250 EEVEKIQKAMGTGIDVSFDCAGL  272 (372)
Q Consensus       250 ~~~~~~~~~~~~~~d~vid~~g~  272 (372)
                      +.+.+..    ..+|+||+|++.
T Consensus       218 ~~l~~~l----~~aDiIINaTp~  236 (315)
T 3tnl_A          218 EQLRKEI----AESVIFTNATGV  236 (315)
T ss_dssp             HHHHHHH----HTCSEEEECSST
T ss_pred             HHHHhhh----cCCCEEEECccC
Confidence            1222222    369999998863

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.31  E-value=0.0088  Score=53.90  Aligned_cols=105  Identities=23%  Similarity=0.264  Sum_probs=69.4

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHH
Q 017426          180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       180 ~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~  254 (372)
                      ..++...++++++||-+|+|. |..+..+++..+. ..|++++.+++..+.+++    .|...+....   .|..+... 
T Consensus        66 ~l~~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~---~d~~~~~~-  140 (317)
T 1dl5_A           66 LFMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVC---GDGYYGVP-  140 (317)
T ss_dssp             HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE---SCGGGCCG-
T ss_pred             HHHHhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEE---CChhhccc-
Confidence            344667789999999999875 7888888887542 369999999988877665    3543322111   11111010 


Q ss_pred             HHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEc
Q 017426          255 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                          ..+.+|+|+...........+.+.|+|+|+++..-
T Consensus       141 ----~~~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~  175 (317)
T 1dl5_A          141 ----EFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPI  175 (317)
T ss_dssp             ----GGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred             ----cCCCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence                13579999976544333357788999999988753

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=96.31  E-value=0.024  Score=49.26  Aligned_cols=81  Identities=16%  Similarity=0.138  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHH---hCCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKE---IGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~---lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+. .++   .+... .+..|-.+ .++.+.+.+..+. .+
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g   90 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNL-HG   90 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            4678999987 9999999999999999 57788788766443 222   24322 22222222 2333333333322 25


Q ss_pred             cceEEEeCCC
Q 017426          262 GIDVSFDCAG  271 (372)
Q Consensus       262 ~~d~vid~~g  271 (372)
                      ++|++|++.|
T Consensus        91 ~iD~lv~~Ag  100 (260)
T 2zat_A           91 GVDILVSNAA  100 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            8999999877

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.31  E-value=0.013  Score=51.43  Aligned_cols=79  Identities=25%  Similarity=0.367  Sum_probs=50.5

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          187 IGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       187 ~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      -..|.++||+|+ +++|.++++.+...|+ .|+++++++++..     +....+..|-.+ ++..+.+.++.+. .+++|
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~iD   83 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDV-----NVSDHFKIDVTNEEEVKEAVEKTTKK-YGRID   83 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CT-----TSSEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhcc-----CceeEEEecCCCHHHHHHHHHHHHHH-cCCCC
Confidence            356889999987 9999999999999999 5777777665431     222233333222 2333344443332 35899


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|++.|.
T Consensus        84 ~lv~nAg~   91 (269)
T 3vtz_A           84 ILVNNAGI   91 (269)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99998874

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.30  E-value=0.026  Score=49.85  Aligned_cols=116  Identities=11%  Similarity=0.009  Sum_probs=68.4

Q ss_pred             HHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCC---CeEEecCCCcccHHHHHHH
Q 017426          180 HACRRANI-GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGA---DNIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       180 ~~l~~~~~-~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~---~~v~~~~~~~~~~~~~~~~  254 (372)
                      .+++.... -.+.+++|+|+|++|.+++..+...|+..|.++.++.++.+ +++.++.   .....+++           
T Consensus       115 ~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~-----------  183 (281)
T 3o8q_A          115 QDLLAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ-----------  183 (281)
T ss_dssp             HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG-----------
T ss_pred             HHHHHhCCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH-----------
Confidence            34554333 35789999999999999999988999877888889887755 4455553   12222111           


Q ss_pred             HHHHcCCcceEEEeCCCcHHHHHH---HHHHhccCCEEEEEcCCCCCccccchhhhccCc
Q 017426          255 IQKAMGTGIDVSFDCAGLNKTMST---ALGATCAGGKVCLVGMGHHEMTVPLTPAAVREV  311 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~~~~~~~---~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  311 (372)
                      +    ...+|+||+|++..-.-+.   ....++++..++.+...+.. ...+...-.++.
T Consensus       184 l----~~~aDiIInaTp~gm~~~~~~l~~~~l~~~~~V~DlvY~P~~-T~ll~~A~~~G~  238 (281)
T 3o8q_A          184 L----KQSYDVIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGKGY-TVFNQWARQHGC  238 (281)
T ss_dssp             C----CSCEEEEEECSCCCC----CSCCGGGEEEEEEEEESCCCSSC-CHHHHHHHHTTC
T ss_pred             h----cCCCCEEEEcCcCCCCCCCCCCCHHHhCcCCEEEEecCCCcc-CHHHHHHHHCCC
Confidence            1    2579999999875311110   12345554445555443322 333444444443

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.30  E-value=0.032  Score=49.09  Aligned_cols=82  Identities=21%  Similarity=0.187  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEec-------------ChhHHHHH----HHhCCCe-EEecCCCc-ccH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-------------DDYRLSVA----KEIGADN-IVKVSTNL-QDI  248 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~-------------~~~~~~~~----~~lg~~~-v~~~~~~~-~~~  248 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+++++             ++++.+.+    +..+... .+..|-.+ ++.
T Consensus        14 ~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           14 QGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            5788999987 9999999999999999 5777765             44444332    2234322 22223222 233


Q ss_pred             HHHHHHHHHHcCCcceEEEeCCCc
Q 017426          249 AEEVEKIQKAMGTGIDVSFDCAGL  272 (372)
Q Consensus       249 ~~~~~~~~~~~~~~~d~vid~~g~  272 (372)
                      .+.+.+..+. .+++|++|++.|.
T Consensus        93 ~~~~~~~~~~-~g~id~lvnnAg~  115 (280)
T 3pgx_A           93 RELVADGMEQ-FGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHH-HCCCCEEEECCCC
T ss_pred             HHHHHHHHHH-cCCCCEEEECCCC
Confidence            3344433332 3589999998874

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=96.29  E-value=0.013  Score=51.14  Aligned_cols=76  Identities=17%  Similarity=0.173  Sum_probs=48.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCc-ccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .|+++||+|+ +++|.++++.+...|+ +|+.++++++.     .+.....+..|-.+ ++....+.+..+ .-+++|++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~~~-~~G~iDil   82 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPE-----GLPEELFVEADLTTKEGCAIVAEATRQ-RLGGVDVI   82 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCT-----TSCTTTEEECCTTSHHHHHHHHHHHHH-HTSSCSEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchh-----CCCcEEEEEcCCCCHHHHHHHHHHHHH-HcCCCCEE
Confidence            5789999987 9999999999999999 57777665432     12211222233222 233333333333 24689999


Q ss_pred             EeCCC
Q 017426          267 FDCAG  271 (372)
Q Consensus       267 id~~g  271 (372)
                      +++.|
T Consensus        83 VnnAG   87 (261)
T 4h15_A           83 VHMLG   87 (261)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99776

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=96.28  E-value=0.028  Score=49.56  Aligned_cols=82  Identities=22%  Similarity=0.248  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe-cChhHHHHH----HHhCCCe-EEecCCC-cccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD-VDDYRLSVA----KEIGADN-IVKVSTN-LQDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~-~~~~~~~~~----~~lg~~~-v~~~~~~-~~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ +++|.++++.+...|++ |++++ +++++.+.+    +..+... .+..|-. .++..+.+.++.+. .
T Consensus        28 ~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~  105 (280)
T 4da9_A           28 ARPVAIVTGGRRGIGLGIARALAASGFD-IAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE-F  105 (280)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH-H
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCe-EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-c
Confidence            5778999987 99999999999999994 66665 455544322    2334322 2223322 23444445444332 3


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus       106 g~iD~lvnnAg~  117 (280)
T 4da9_A          106 GRIDCLVNNAGI  117 (280)
T ss_dssp             SCCCEEEEECC-
T ss_pred             CCCCEEEECCCc
Confidence            589999998875

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.28  E-value=0.012  Score=51.08  Aligned_cols=125  Identities=18%  Similarity=0.269  Sum_probs=73.3

Q ss_pred             CceEECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH--
Q 017426          155 DLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE--  232 (372)
Q Consensus       155 ~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~--  232 (372)
                      ...+.+++++.+...... ........+... ++++++||-.|+|. |..++.+++ .|+ .+++++.++...+.+++  
T Consensus        88 ~~~~~l~p~~~fgtg~~~-tt~~~~~~l~~~-~~~~~~VLDiGcG~-G~l~~~la~-~g~-~v~gvDi~~~~v~~a~~n~  162 (254)
T 2nxc_A           88 EIPLVIEPGMAFGTGHHE-TTRLALKALARH-LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANA  162 (254)
T ss_dssp             SEEEECCCC-----CCSH-HHHHHHHHHHHH-CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHH
T ss_pred             ceEEEECCCccccCCCCH-HHHHHHHHHHHh-cCCCCEEEEecCCC-cHHHHHHHH-hCC-eEEEEECCHHHHHHHHHHH
Confidence            345666665544433211 111122334333 67899999999865 777777666 577 89999999988777655  


Q ss_pred             --hCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCc---HHHHHHHHHHhccCCEEEEEcC
Q 017426          233 --IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       233 --lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                        .+.. +...   ..++.+.   +   ....+|+|+.....   ...+..+.+.|+++|.++..+.
T Consensus       163 ~~~~~~-v~~~---~~d~~~~---~---~~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~  219 (254)
T 2nxc_A          163 KRNGVR-PRFL---EGSLEAA---L---PFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             HHTTCC-CEEE---ESCHHHH---G---GGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             HHcCCc-EEEE---ECChhhc---C---cCCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEee
Confidence              3433 1111   1233222   1   13679999975432   2356677889999999988653

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=96.28  E-value=0.019  Score=49.91  Aligned_cols=81  Identities=21%  Similarity=0.237  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhH-HHH-HHHh----CCCe-EEecCCCc-ccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR-LSV-AKEI----GADN-IVKVSTNL-QDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~-~~~-~~~l----g~~~-v~~~~~~~-~~~~~~~~~~~~~~  259 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++ .+. .+.+    +... .+..|-.+ +++.+.+.+..+. 
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-   80 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ-   80 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHh-
Confidence            3678999987 9999999999999999 57777777665 332 2332    4332 22223222 2333334433322 


Q ss_pred             CCcceEEEeCCC
Q 017426          260 GTGIDVSFDCAG  271 (372)
Q Consensus       260 ~~~~d~vid~~g  271 (372)
                      .+++|++|++.|
T Consensus        81 ~g~iD~lv~~Ag   92 (260)
T 1x1t_A           81 MGRIDILVNNAG   92 (260)
T ss_dssp             HSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            257999999886

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.27  E-value=0.023  Score=48.43  Aligned_cols=104  Identities=14%  Similarity=0.150  Sum_probs=67.8

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC--CeEEecCCCcccHHHHHHHHHHHcC
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA--DNIVKVSTNLQDIAEEVEKIQKAMG  260 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~--~~v~~~~~~~~~~~~~~~~~~~~~~  260 (372)
                      +...++++++||-.|+|. |..+..+++..|...|++++.+++..+.+++.-.  ..+........+... .  . . ..
T Consensus        68 ~~~~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~-~--~-~-~~  141 (230)
T 1fbn_A           68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQE-Y--A-N-IV  141 (230)
T ss_dssp             CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGG-G--T-T-TS
T ss_pred             cccCCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCccc-c--c-c-cC
Confidence            345678899999999875 8888889988875589999999988877655321  222111111111000 0  0 0 12


Q ss_pred             CcceEEEeCCCcH----HHHHHHHHHhccCCEEEEE
Q 017426          261 TGIDVSFDCAGLN----KTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       261 ~~~d~vid~~g~~----~~~~~~~~~l~~~G~~v~~  292 (372)
                      ..+|+|+.....+    ..+..+.+.|+|+|.++..
T Consensus       142 ~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          142 EKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            5799999655443    3477888899999998875

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.27  E-value=0.012  Score=52.60  Aligned_cols=95  Identities=16%  Similarity=0.133  Sum_probs=62.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCCC--eEEecCCCcccHHHHHHHHHHHcCCcceE
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~d~  265 (372)
                      .+.+++|+|+|.+|.+++..+...|+..|+++.++.++.+ +++.++..  .+.       ++. .+.+.    -..+|+
T Consensus       140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~-------~~~-~~~~~----~~~aDi  207 (297)
T 2egg_A          140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYF-------SLA-EAETR----LAEYDI  207 (297)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEE-------CHH-HHHHT----GGGCSE
T ss_pred             CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCcee-------eHH-HHHhh----hccCCE
Confidence            5789999999999999999999999877888989887754 55666652  222       111 22222    257999


Q ss_pred             EEeCCCcHHH-----HHHHHHHhccCCEEEEEcCC
Q 017426          266 SFDCAGLNKT-----MSTALGATCAGGKVCLVGMG  295 (372)
Q Consensus       266 vid~~g~~~~-----~~~~~~~l~~~G~~v~~g~~  295 (372)
                      ||+|++....     .......++++..++.+...
T Consensus       208 vIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y~  242 (297)
T 2egg_A          208 IINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIYN  242 (297)
T ss_dssp             EEECSCTTCSSCCSCCSSCCTTCCTTCEEEECCCS
T ss_pred             EEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCCC
Confidence            9999886421     00112345566666666553

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.27  E-value=0.019  Score=50.53  Aligned_cols=81  Identities=20%  Similarity=0.263  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHH----hCCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKE----IGADN-IVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~----lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|++++++.++.+. +++    .+... .+..|-.+ .+..+.+.++.+. .
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~  103 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE-F  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4789999987 9999999999999999 57778788765432 222    24322 22223222 2333344444332 3


Q ss_pred             CcceEEEeCCC
Q 017426          261 TGIDVSFDCAG  271 (372)
Q Consensus       261 ~~~d~vid~~g  271 (372)
                      +++|++|++.|
T Consensus       104 g~id~lv~nAg  114 (277)
T 4fc7_A          104 GRIDILINCAA  114 (277)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            58999999987

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=96.26  E-value=0.021  Score=52.32  Aligned_cols=131  Identities=16%  Similarity=0.138  Sum_probs=82.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc-CCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          191 TNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      -+|.|+|+|.+|...+..++.. +++.+.+.++++++.+.++++|+..   +    .++.+    +..  ...+|+|+.|
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~---~----~~~~~----ll~--~~~~D~V~i~   72 (359)
T 3e18_A            6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKI---Y----ESYEA----VLA--DEKVDAVLIA   72 (359)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCB---C----SCHHH----HHH--CTTCCEEEEC
T ss_pred             CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCce---e----CCHHH----Hhc--CCCCCEEEEc
Confidence            3788999999999888877766 6655556688888888777777642   2    23333    322  3579999999


Q ss_pred             CCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchh----hhccCcEE-Eee-ccCCCcHHHHHHHHHcCCC
Q 017426          270 AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDV-VGV-FRYKNTWPLCLELLRSGKI  335 (372)
Q Consensus       270 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i-~~~-~~~~~~~~~~~~ll~~g~~  335 (372)
                      +....+.+.+..+|.. |+.+.+.-......-....    .-.+++.+ .+. ..+...+..+.+++++|.+
T Consensus        73 tp~~~h~~~~~~al~a-GkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  143 (359)
T 3e18_A           73 TPNDSHKELAISALEA-GKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMFEQKTI  143 (359)
T ss_dssp             SCGGGHHHHHHHHHHT-TCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHHTTT
T ss_pred             CCcHHHHHHHHHHHHC-CCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEeeeccCHHHHHHHHHHHcCCC
Confidence            9987788888888875 5556664211110111111    11122222 222 2336678888899999887

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.26  E-value=0.024  Score=49.95  Aligned_cols=81  Identities=26%  Similarity=0.297  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CC---C-eEEecCCCc-ccHHHHHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GA---D-NIVKVSTNL-QDIAEEVEKIQKA  258 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~---~-~v~~~~~~~-~~~~~~~~~~~~~  258 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+.+ +++   +.   . ..+..|-.+ ++..+.+.+..+.
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            4678999987 9999999999999999 577888887765433 332   32   1 222233222 2333334433322


Q ss_pred             cCCcceEEEeCCC
Q 017426          259 MGTGIDVSFDCAG  271 (372)
Q Consensus       259 ~~~~~d~vid~~g  271 (372)
                       .+++|++|++.|
T Consensus        84 -~g~iD~lv~nAg   95 (280)
T 1xkq_A           84 -FGKIDVLVNNAG   95 (280)
T ss_dssp             -HSCCCEEEECCC
T ss_pred             -cCCCCEEEECCC
Confidence             257999999876

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.26  E-value=0.023  Score=49.99  Aligned_cols=81  Identities=14%  Similarity=0.147  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHH---hCCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKE---IGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~---lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+++++++++.+. .++   .+... .+..|-.+ .+..+.+.+..+.  +
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~--g  108 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI--A  108 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH--S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh--C
Confidence            4688999987 9999999999999999 57777777655332 222   34322 22233222 3344444444432  6


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus       109 ~iD~lvnnAg~  119 (275)
T 4imr_A          109 PVDILVINASA  119 (275)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            89999998874

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.26  E-value=0.019  Score=50.42  Aligned_cols=107  Identities=18%  Similarity=0.193  Sum_probs=66.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCC--CeEEecCCCcccHHHHHHHHHHHcCCcceE
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGA--DNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~  265 (372)
                      .+.+++|+|+|++|.+++..+...|+..|.++.++.++.+ +++.++.  ..+..++    ++       .   ...+|+
T Consensus       119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~----~l-------~---~~~~Di  184 (272)
T 3pwz_A          119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYE----AL-------E---GQSFDI  184 (272)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG----GG-------T---TCCCSE
T ss_pred             cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH----Hh-------c---ccCCCE
Confidence            5789999999999999999999999877888889888765 4456654  1222211    11       0   157999


Q ss_pred             EEeCCCcHHHH---HHHHHHhccCCEEEEEcCCCCCccccchhhhccC
Q 017426          266 SFDCAGLNKTM---STALGATCAGGKVCLVGMGHHEMTVPLTPAAVRE  310 (372)
Q Consensus       266 vid~~g~~~~~---~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  310 (372)
                      ||+|++..-.-   ......++++..++.+...+.. ...+...-.++
T Consensus       185 vInaTp~gm~~~~~~i~~~~l~~~~~V~DlvY~P~~-T~ll~~A~~~G  231 (272)
T 3pwz_A          185 VVNATSASLTADLPPLPADVLGEAALAYELAYGKGL-TPFLRLAREQG  231 (272)
T ss_dssp             EEECSSGGGGTCCCCCCGGGGTTCSEEEESSCSCCS-CHHHHHHHHHS
T ss_pred             EEECCCCCCCCCCCCCCHHHhCcCCEEEEeecCCCC-CHHHHHHHHCC
Confidence            99998753100   0112345666666666444332 33344444444

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=96.26  E-value=0.02  Score=50.09  Aligned_cols=82  Identities=23%  Similarity=0.306  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEec-ChhHHHHH----HHhCCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLSVA----KEIGADN-IVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~-~~~~~~~~----~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .|.++||+|+ +++|.++++.+...|++ |+++.+ +++..+.+    ++.+... ++..|-.+ .+..+.+.++.+. .
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~  105 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLK-VWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS-D  105 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh-c
Confidence            4778999987 99999999999999994 666666 44443332    3344322 23333222 2333444444332 3


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus       106 g~id~li~nAg~  117 (271)
T 4iin_A          106 GGLSYLVNNAGV  117 (271)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            589999998874

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=96.25  E-value=0.018  Score=50.45  Aligned_cols=83  Identities=19%  Similarity=0.147  Sum_probs=51.0

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH----HHhCCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017426          188 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       188 ~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      ..+.++||+|+ |++|.++++.+...|+++++...+++++.+.+    ++.+... .+..|-.+ .+..+.+.++.+. .
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~  102 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQ-F  102 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh-C
Confidence            45678999987 99999999999999995444446666655433    2233222 22223222 2333344443332 2


Q ss_pred             CcceEEEeCCC
Q 017426          261 TGIDVSFDCAG  271 (372)
Q Consensus       261 ~~~d~vid~~g  271 (372)
                      +++|++|++.|
T Consensus       103 g~id~li~nAg  113 (272)
T 4e3z_A          103 GRLDGLVNNAG  113 (272)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            58999999876

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=96.25  E-value=0.037  Score=47.38  Aligned_cols=78  Identities=26%  Similarity=0.163  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-HhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      ++.++||+|+ |.+|..+++.+...|+ .|+++++++++.+.+. ++.-..++..|-.+   .+.++++.+ ..+++|++
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~-~~~~id~v   80 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGD---WDATEKALG-GIGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC---HHHHHHHHT-TCCCCSEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCCcEEecCCC---HHHHHHHHH-HcCCCCEE
Confidence            4678999998 9999999999999999 5788888877655443 33222333333222   223444332 23579999


Q ss_pred             EeCCC
Q 017426          267 FDCAG  271 (372)
Q Consensus       267 id~~g  271 (372)
                      |++.|
T Consensus        81 i~~Ag   85 (244)
T 1cyd_A           81 VNNAA   85 (244)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99987

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.24  E-value=0.0092  Score=50.80  Aligned_cols=98  Identities=18%  Similarity=0.229  Sum_probs=65.7

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC------CeEEEEecChhHHHHHHHh----C-----CCeEEecCCCcccHHH
Q 017426          186 NIGPETNVLIMGAGPIGLVTMLAARAFGA------PRIVIVDVDDYRLSVAKEI----G-----ADNIVKVSTNLQDIAE  250 (372)
Q Consensus       186 ~~~~g~~vlI~Gag~~G~~ai~l~~~~g~------~~vv~v~~~~~~~~~~~~l----g-----~~~v~~~~~~~~~~~~  250 (372)
                      .++++++||-+|+|. |..+..+++..+.      ..|++++.+++..+.+++.    +     ...+.....   +..+
T Consensus        81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~---d~~~  156 (227)
T 1r18_A           81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG---DGRK  156 (227)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES---CGGG
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEEC---Cccc
Confidence            578999999999875 8888888887663      3799999999887766542    2     112211111   1111


Q ss_pred             HHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEE
Q 017426          251 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       251 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  292 (372)
                      .   +.  ....||+|+...........+.+.|+++|+++..
T Consensus       157 ~---~~--~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~  193 (227)
T 1r18_A          157 G---YP--PNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  193 (227)
T ss_dssp             C---CG--GGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             C---CC--cCCCccEEEECCchHHHHHHHHHHhcCCCEEEEE
Confidence            0   10  1257999998766555567888999999998865

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=96.23  E-value=0.033  Score=49.49  Aligned_cols=81  Identities=17%  Similarity=0.215  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh--------CCC-eEEecCCCc-ccHHHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI--------GAD-NIVKVSTNL-QDIAEEVEKIQ  256 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l--------g~~-~v~~~~~~~-~~~~~~~~~~~  256 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+.+ +++        +.. ..+..|-.+ .++.+.+.+..
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   95 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   95 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence            4678999998 9999999999999998 577777887665432 222        222 122223222 23333343333


Q ss_pred             HHcCCcceEEEeCCC
Q 017426          257 KAMGTGIDVSFDCAG  271 (372)
Q Consensus       257 ~~~~~~~d~vid~~g  271 (372)
                      +. .+++|++|++.|
T Consensus        96 ~~-~g~id~li~~Ag  109 (303)
T 1yxm_A           96 DT-FGKINFLVNNGG  109 (303)
T ss_dssp             HH-HSCCCEEEECCC
T ss_pred             HH-cCCCCEEEECCC
Confidence            22 257999999887

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.23  E-value=0.0029  Score=54.51  Aligned_cols=99  Identities=14%  Similarity=0.132  Sum_probs=65.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCC---eEEecCCCcccHHHHHHHHHHHcCCcc
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD---NIVKVSTNLQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      ..+|.+||-+|+| .|..+..+++..+. .+++++.+++-.+.+++....   .+...   ..++.+....+   ....|
T Consensus        58 ~~~G~rVLdiG~G-~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~---~~~a~~~~~~~---~~~~F  129 (236)
T 3orh_A           58 SSKGGRVLEVGFG-MAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPL---KGLWEDVAPTL---PDGHF  129 (236)
T ss_dssp             TTTCEEEEEECCT-TSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEE---ESCHHHHGGGS---CTTCE
T ss_pred             ccCCCeEEEECCC-ccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEE---eehHHhhcccc---cccCC
Confidence            4689999999986 37777788776665 689999999988888775421   11111   12332222111   24579


Q ss_pred             eEE-EeCCCc----------HHHHHHHHHHhccCCEEEEEc
Q 017426          264 DVS-FDCAGL----------NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       264 d~v-id~~g~----------~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      |.| +|+...          ...+..+.++|+|+|+++.+.
T Consensus       130 D~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             ceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence            998 465432          134567889999999998764

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.23  E-value=0.034  Score=48.85  Aligned_cols=78  Identities=18%  Similarity=0.262  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCCCe-EEecCCCcc-cHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGADN-IVKVSTNLQ-DIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~~~-v~~~~~~~~-~~~~~~~~~~~~~~~~~d  264 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+++++++++.+. .++++... .+..|-.+. +..+.+.++ + ..+++|
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~-~-~~~~id  105 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA-N-QLGRLR  105 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH-T-TSSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH-H-HhCCCC
Confidence            4678999998 9999999999999999 57888888877654 45566432 233332222 233333333 2 245899


Q ss_pred             EEEeC
Q 017426          265 VSFDC  269 (372)
Q Consensus       265 ~vid~  269 (372)
                      ++|.+
T Consensus       106 ~lv~~  110 (281)
T 3ppi_A          106 YAVVA  110 (281)
T ss_dssp             EEEEC
T ss_pred             eEEEc
Confidence            99987

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.23  E-value=0.035  Score=49.38  Aligned_cols=81  Identities=19%  Similarity=0.188  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecC------------hhHHH----HHHHhCCCe-EEecCCCc-ccHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD------------DYRLS----VAKEIGADN-IVKVSTNL-QDIA  249 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~------------~~~~~----~~~~lg~~~-v~~~~~~~-~~~~  249 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|++++++            +++.+    .++..+... .+..|-.+ .+..
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            4678999987 9999999999999999 57777665            33332    233445332 22233222 2333


Q ss_pred             HHHHHHHHHcCCcceEEEeCCC
Q 017426          250 EEVEKIQKAMGTGIDVSFDCAG  271 (372)
Q Consensus       250 ~~~~~~~~~~~~~~d~vid~~g  271 (372)
                      +.+.++.+. .+++|++|++.|
T Consensus       106 ~~~~~~~~~-~g~iD~lv~nAg  126 (299)
T 3t7c_A          106 AAVDDGVTQ-LGRLDIVLANAA  126 (299)
T ss_dssp             HHHHHHHHH-HSCCCEEEECCC
T ss_pred             HHHHHHHHH-hCCCCEEEECCC
Confidence            344443332 358999999876

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.22  E-value=0.015  Score=50.02  Aligned_cols=81  Identities=20%  Similarity=0.294  Sum_probs=52.4

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC--CCeEEEEecChhHHHHHHHh-CCC-eEEecCCCc-ccHHHHHHHHHHHcC-Cc
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFG--APRIVIVDVDDYRLSVAKEI-GAD-NIVKVSTNL-QDIAEEVEKIQKAMG-TG  262 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g--~~~vv~v~~~~~~~~~~~~l-g~~-~v~~~~~~~-~~~~~~~~~~~~~~~-~~  262 (372)
                      +.++||+|+ |.+|.++++.+...|  + .|+++++++++.+.++++ +.. .++..|-.+ .++.+.+.++.+..+ .+
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            568999987 999999999999899  7 688888888776666555 222 223333222 223333333332211 27


Q ss_pred             ceEEEeCCC
Q 017426          263 IDVSFDCAG  271 (372)
Q Consensus       263 ~d~vid~~g  271 (372)
                      +|++|++.|
T Consensus        82 id~li~~Ag   90 (250)
T 1yo6_A           82 LSLLINNAG   90 (250)
T ss_dssp             CCEEEECCC
T ss_pred             CcEEEECCc
Confidence            999999876

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.21  E-value=0.038  Score=45.05  Aligned_cols=102  Identities=21%  Similarity=0.248  Sum_probs=68.2

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCC-CeEEecCCCcccHHHHHHHH
Q 017426          181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGA-DNIVKVSTNLQDIAEEVEKI  255 (372)
Q Consensus       181 ~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~-~~v~~~~~~~~~~~~~~~~~  255 (372)
                      .++...+.++.+||-.|+|. |..+..+++..  ..+++++.+++..+.+++    .+. ..+...   ..++.+.+.  
T Consensus        25 ~~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~---~~d~~~~~~--   96 (192)
T 1l3i_A           25 IMCLAEPGKNDVAVDVGCGT-GGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLM---EGDAPEALC--   96 (192)
T ss_dssp             HHHHHCCCTTCEEEEESCTT-SHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEE---ESCHHHHHT--
T ss_pred             HHHhcCCCCCCEEEEECCCC-CHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEE---ecCHHHhcc--
Confidence            34556778999999999866 77777877766  479999999988877665    343 222111   123322221  


Q ss_pred             HHHcCCcceEEEeCCC---cHHHHHHHHHHhccCCEEEEEc
Q 017426          256 QKAMGTGIDVSFDCAG---LNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       256 ~~~~~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                         ....+|+|+....   -...+..+.+.|+++|.++...
T Consensus        97 ---~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~  134 (192)
T 1l3i_A           97 ---KIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (192)
T ss_dssp             ---TSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             ---cCCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence               1147999996543   1356777888999999988753

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.21  E-value=0.018  Score=52.58  Aligned_cols=82  Identities=30%  Similarity=0.298  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhH-----------HHHHHHhCCCe-EEecCCCc-ccHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR-----------LSVAKEIGADN-IVKVSTNL-QDIAEEVEK  254 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~-----------~~~~~~lg~~~-v~~~~~~~-~~~~~~~~~  254 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+.+.+++++           .+.+++.+... .+..|-.+ ++..+.+.+
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            4789999997 9999999999999999 57777676543           23334445322 22223222 233344444


Q ss_pred             HHHHcCCcceEEEeCCCc
Q 017426          255 IQKAMGTGIDVSFDCAGL  272 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~  272 (372)
                      +.+. .+++|++|++.|.
T Consensus       123 ~~~~-~g~iDilVnnAG~  139 (346)
T 3kvo_A          123 AIKK-FGGIDILVNNASA  139 (346)
T ss_dssp             HHHH-HSCCCEEEECCCC
T ss_pred             HHHH-cCCCCEEEECCCC
Confidence            4332 3589999998874

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=96.20  E-value=0.031  Score=47.88  Aligned_cols=81  Identities=22%  Similarity=0.187  Sum_probs=51.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCC------eEEEEecChhHHHHH-HHh---CCC-eEEecCCCc-ccHHHHHHHHH
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAP------RIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTNL-QDIAEEVEKIQ  256 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~------~vv~v~~~~~~~~~~-~~l---g~~-~v~~~~~~~-~~~~~~~~~~~  256 (372)
                      +.++||+|+ |.+|..+++.+...|+.      .|+++++++++.+.+ +++   +.. ..+..|-.+ +++.+.+.++.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            467899987 99999999988888983      577777887665543 233   322 122233222 23333444433


Q ss_pred             HHcCCcceEEEeCCC
Q 017426          257 KAMGTGIDVSFDCAG  271 (372)
Q Consensus       257 ~~~~~~~d~vid~~g  271 (372)
                      + ..+++|++|++.|
T Consensus        82 ~-~~g~id~li~~Ag   95 (244)
T 2bd0_A           82 E-RYGHIDCLVNNAG   95 (244)
T ss_dssp             H-HTSCCSEEEECCC
T ss_pred             H-hCCCCCEEEEcCC
Confidence            3 2458999999887

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=96.20  E-value=0.03  Score=48.55  Aligned_cols=81  Identities=19%  Similarity=0.234  Sum_probs=50.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhH--HH-HHHHh---CCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR--LS-VAKEI---GADN-IVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~--~~-~~~~l---g~~~-v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      +.++||+|+ |.+|.++++.+...|+ .|+++++++++  .+ ..+.+   +... .+..|-.+ +++.+.+.+..+. .
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEK-L   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-h
Confidence            568999987 9999999998888899 57777777665  33 33333   3222 22223222 2333344433332 2


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus        80 g~iD~lv~nAg~   91 (258)
T 3a28_C           80 GGFDVLVNNAGI   91 (258)
T ss_dssp             TCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            579999998873

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=96.19  E-value=0.024  Score=49.53  Aligned_cols=83  Identities=18%  Similarity=0.084  Sum_probs=50.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHH---hCCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKE---IGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~---lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ +++|.++++.+...|+++++...++.++.+. ++.   .+.. .++..|-.+ ++..+.+.+..+. .+
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g  103 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ-HG  103 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH-hC
Confidence            3578999987 9999999999999999644556566554332 222   3322 233333222 2333334433332 35


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus       104 ~id~li~nAg~  114 (267)
T 4iiu_A          104 AWYGVVSNAGI  114 (267)
T ss_dssp             CCSEEEECCCC
T ss_pred             CccEEEECCCC
Confidence            89999998774

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.18  E-value=0.024  Score=50.11  Aligned_cols=82  Identities=22%  Similarity=0.232  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhH-----------HHHHHHhCCCe-EEecCCCc-ccHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR-----------LSVAKEIGADN-IVKVSTNL-QDIAEEVEK  254 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~-----------~~~~~~lg~~~-v~~~~~~~-~~~~~~~~~  254 (372)
                      .+.++||+|+ +++|.++++.+...|+ .|+.+++++++           .+.++..+... .+..|-.+ ++..+.+.+
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            4678999987 9999999999999999 57777776542           22334445322 22223222 233344444


Q ss_pred             HHHHcCCcceEEEeCCCc
Q 017426          255 IQKAMGTGIDVSFDCAGL  272 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~  272 (372)
                      +.+. .+++|++|++.|.
T Consensus        87 ~~~~-~g~id~lvnnAg~  103 (285)
T 3sc4_A           87 TVEQ-FGGIDICVNNASA  103 (285)
T ss_dssp             HHHH-HSCCSEEEECCCC
T ss_pred             HHHH-cCCCCEEEECCCC
Confidence            4332 3589999998874

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.18  E-value=0.011  Score=52.18  Aligned_cols=75  Identities=21%  Similarity=0.364  Sum_probs=51.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCC----CeEEecCCCcccHHHHHHHHHHHcCCc
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGA----DNIVKVSTNLQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~----~~v~~~~~~~~~~~~~~~~~~~~~~~~  262 (372)
                      -.+.++||+|+|++|.+++..+...|++.++++.++.++.+. ++.++.    ..+..++.  +++.+.+        ..
T Consensus       125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~--~~l~~~l--------~~  194 (283)
T 3jyo_A          125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA--RGIEDVI--------AA  194 (283)
T ss_dssp             CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS--TTHHHHH--------HH
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH--HHHHHHH--------hc
Confidence            357899999999999999999999999778889898887664 344431    11222211  2332222        35


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|+||+|++.
T Consensus       195 ~DiVInaTp~  204 (283)
T 3jyo_A          195 ADGVVNATPM  204 (283)
T ss_dssp             SSEEEECSST
T ss_pred             CCEEEECCCC
Confidence            8999999863

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.17  E-value=0.033  Score=47.88  Aligned_cols=80  Identities=20%  Similarity=0.221  Sum_probs=51.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh----CCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI----GAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l----g~~-~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      +.++||+|+ |.+|.+++..+...|+ .|+++++++++.+.+ +.+    +.. ..+..|-.+ .++.+.+.++.+. .+
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   79 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQ-FG   79 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-hC
Confidence            568999988 9999999999999998 577787887665533 333    221 122223222 2333344433322 25


Q ss_pred             cceEEEeCCC
Q 017426          262 GIDVSFDCAG  271 (372)
Q Consensus       262 ~~d~vid~~g  271 (372)
                      ++|++|++.|
T Consensus        80 ~id~li~~Ag   89 (250)
T 2cfc_A           80 AIDVLVNNAG   89 (250)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999876

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.17  E-value=0.025  Score=50.40  Aligned_cols=81  Identities=22%  Similarity=0.296  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CC---C-eEEecCCCc-ccHHHHHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GA---D-NIVKVSTNL-QDIAEEVEKIQKA  258 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~---~-~v~~~~~~~-~~~~~~~~~~~~~  258 (372)
                      .+.++||+|+ |++|.++++.+...|+ .|+++++++++.+.+ +++   +.   . ..+..|-.+ .++.+.+.+..+.
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  103 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK  103 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence            4678999987 9999999999999999 577788887765433 222   32   1 222233222 2333334433322


Q ss_pred             cCCcceEEEeCCC
Q 017426          259 MGTGIDVSFDCAG  271 (372)
Q Consensus       259 ~~~~~d~vid~~g  271 (372)
                       .+++|++|++.|
T Consensus       104 -~g~iD~lvnnAG  115 (297)
T 1xhl_A          104 -FGKIDILVNNAG  115 (297)
T ss_dssp             -HSCCCEEEECCC
T ss_pred             -cCCCCEEEECCC
Confidence             258999999876

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.17  E-value=0.029  Score=47.55  Aligned_cols=103  Identities=19%  Similarity=0.234  Sum_probs=68.2

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHHh----CCC-eEEecCCCcccHHHHHHHHHHHc
Q 017426          186 NIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKEI----GAD-NIVKVSTNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       186 ~~~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~l----g~~-~v~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      +..++.+||-.|+| .|..++.+++..+ ...+++++.+++..+.+++.    |.. .+...   ..+..+.+..+.. .
T Consensus        66 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~---~~d~~~~~~~~~~-~  140 (229)
T 2avd_A           66 RLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLR---LKPALETLDELLA-A  140 (229)
T ss_dssp             HHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEE---ESCHHHHHHHHHH-T
T ss_pred             HhcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEE---EcCHHHHHHHHHh-c
Confidence            34567899999987 6888889988764 34899999999887776643    432 22111   1333333333321 1


Q ss_pred             C--CcceEEEeCCCc---HHHHHHHHHHhccCCEEEEEc
Q 017426          260 G--TGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       260 ~--~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      +  +.+|+||-....   ...+..+.+.|+++|.++...
T Consensus       141 ~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  179 (229)
T 2avd_A          141 GEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  179 (229)
T ss_dssp             TCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEC
Confidence            1  579998854332   246788899999999988754

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=96.16  E-value=0.045  Score=47.99  Aligned_cols=81  Identities=12%  Similarity=0.176  Sum_probs=50.4

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCeEEEEecChh---HHHHH-HHhCCCeEEecCCCcc-cHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDDY---RLSVA-KEIGADNIVKVSTNLQ-DIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga---g~~G~~ai~l~~~~g~~~vv~v~~~~~---~~~~~-~~lg~~~v~~~~~~~~-~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+   |++|.++++.+...|+ .|++++++++   ..+.+ +..+....+..|-.+. +..+.+.+..+ ..
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~~   82 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKK-DL   82 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH-HT
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHH-Hc
Confidence            4678999985   6999999999999998 5777777664   23322 2334323333333222 23333333332 24


Q ss_pred             CcceEEEeCCC
Q 017426          261 TGIDVSFDCAG  271 (372)
Q Consensus       261 ~~~d~vid~~g  271 (372)
                      +++|++|++.|
T Consensus        83 g~id~lv~nAg   93 (275)
T 2pd4_A           83 GSLDFIVHSVA   93 (275)
T ss_dssp             SCEEEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            58999999886

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=96.16  E-value=0.034  Score=48.45  Aligned_cols=81  Identities=17%  Similarity=0.217  Sum_probs=49.8

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCeEEEEecCh---hHHHHH-HHhCCCeEEecCCCcc-cHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDD---YRLSVA-KEIGADNIVKVSTNLQ-DIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga---g~~G~~ai~l~~~~g~~~vv~v~~~~---~~~~~~-~~lg~~~v~~~~~~~~-~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+   |.+|.++++.+...|+ .|+++++++   +..+.+ +..+....+..|-.+. +..+.+.+..+ ..
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~~   85 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGK-VW   85 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHT-TC
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHH-Hc
Confidence            4678999975   5899999999999999 577777765   222222 2234333343333222 23333333332 23


Q ss_pred             CcceEEEeCCC
Q 017426          261 TGIDVSFDCAG  271 (372)
Q Consensus       261 ~~~d~vid~~g  271 (372)
                      +++|++|++.|
T Consensus        86 g~iD~lv~~Ag   96 (265)
T 1qsg_A           86 PKFDGFVHSIG   96 (265)
T ss_dssp             SSEEEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            58999999876

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=96.14  E-value=0.027  Score=49.27  Aligned_cols=81  Identities=26%  Similarity=0.409  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCC---CeEEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGA---DNIVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~---~~v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      .+.++||+|+ |.+|..+++.+...|+ .|+++++++++.+ ..++++.   ...+..|-.+ .++.+.+.+..+. .++
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   92 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAK-HGK   92 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH-HSC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence            4678999998 9999999999999998 5777778776544 3344542   1222233222 2333334333322 257


Q ss_pred             ceEEEeCCC
Q 017426          263 IDVSFDCAG  271 (372)
Q Consensus       263 ~d~vid~~g  271 (372)
                      +|++|++.|
T Consensus        93 id~li~~Ag  101 (278)
T 2bgk_A           93 LDIMFGNVG  101 (278)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCc
Confidence            999998876

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=96.13  E-value=0.034  Score=48.89  Aligned_cols=82  Identities=18%  Similarity=0.234  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-CH--HHHHHHHHHHHcCCCeEEEEecCh--hHHHHH-HHhCCCeEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GP--IGLVTMLAARAFGAPRIVIVDVDD--YRLSVA-KEIGADNIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~--~G~~ai~l~~~~g~~~vv~v~~~~--~~~~~~-~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |.  +|.++++.+...|+ .|++++++.  +..+.+ ++.+....+..|-.+ ++..+.+.++.+ ..+
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~g  102 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGK-VWD  102 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHH-HCS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHH-HcC
Confidence            4689999985 44  99999999999999 577777766  444444 334433344444333 233344444433 246


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus       103 ~id~li~nAg~  113 (280)
T 3nrc_A          103 GLDAIVHSIAF  113 (280)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            89999998763

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=96.12  E-value=0.021  Score=48.78  Aligned_cols=103  Identities=14%  Similarity=0.125  Sum_probs=67.7

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHHHhCC--CeE--EecCCCcccHHHHHHHHH
Q 017426          182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEIGA--DNI--VKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       182 l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~~lg~--~~v--~~~~~~~~~~~~~~~~~~  256 (372)
                      ++...++||++||=.|+|. |..+..+++..|- ..|++++.+++..+.+++.-.  ..+  +..+....+.   ..   
T Consensus        70 l~~l~ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~---~~---  142 (233)
T 4df3_A           70 LIELPVKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEK---YR---  142 (233)
T ss_dssp             CSCCCCCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGG---GT---
T ss_pred             hhhcCCCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccc---cc---
Confidence            3557799999999999864 7888889988764 379999999998877655321  122  1112211110   00   


Q ss_pred             HHcCCcceEEEeCCCcH----HHHHHHHHHhccCCEEEEE
Q 017426          257 KAMGTGIDVSFDCAGLN----KTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~~----~~~~~~~~~l~~~G~~v~~  292 (372)
                       .....+|+||.....+    ..+..+.+.|+|+|+++..
T Consensus       143 -~~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          143 -HLVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             -TTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             -cccceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence             0135799888654433    2456677899999998864

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=96.12  E-value=0.044  Score=48.08  Aligned_cols=82  Identities=23%  Similarity=0.200  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEec-------------ChhHHHH----HHHhCCCe-EEecCCCc-ccH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-------------DDYRLSV----AKEIGADN-IVKVSTNL-QDI  248 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~-------------~~~~~~~----~~~lg~~~-v~~~~~~~-~~~  248 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+++++             +.++.+.    ++..+... .+..|-.+ .+.
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            4678999987 9999999999999999 5777765             3443332    22334322 22223222 233


Q ss_pred             HHHHHHHHHHcCCcceEEEeCCCc
Q 017426          249 AEEVEKIQKAMGTGIDVSFDCAGL  272 (372)
Q Consensus       249 ~~~~~~~~~~~~~~~d~vid~~g~  272 (372)
                      .+.+.+..+. .+++|++|++.|.
T Consensus        89 ~~~~~~~~~~-~g~id~lvnnAg~  111 (277)
T 3tsc_A           89 RKVVDDGVAA-LGRLDIIVANAGV  111 (277)
T ss_dssp             HHHHHHHHHH-HSCCCEEEECCCC
T ss_pred             HHHHHHHHHH-cCCCCEEEECCCC
Confidence            3334433332 3579999998874

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=96.12  E-value=0.027  Score=48.85  Aligned_cols=81  Identities=21%  Similarity=0.248  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEec-ChhHHHH-HHH---hCCC-eEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLSV-AKE---IGAD-NIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~-~~~~~~~-~~~---lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++ ++++.+. .+.   .+.. ..+..|-.+ .++.+.+.++.+. .
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   83 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE-F   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            3678999987 9999999999988999 5777767 6655432 222   2432 122223222 2333334433322 2


Q ss_pred             CcceEEEeCCC
Q 017426          261 TGIDVSFDCAG  271 (372)
Q Consensus       261 ~~~d~vid~~g  271 (372)
                      +++|++|++.|
T Consensus        84 g~id~li~~Ag   94 (261)
T 1gee_A           84 GKLDVMINNAG   94 (261)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999876

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=96.12  E-value=0.037  Score=48.08  Aligned_cols=82  Identities=21%  Similarity=0.208  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |++|.++++.+...|+ .|+++++++++.+.+ +++   +.. ..+..|-.+ .+..+.+.+..+...+
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            3678999987 9999999999999998 577777887665432 232   432 122223222 2333334333221146


Q ss_pred             cceEEEeCCC
Q 017426          262 GIDVSFDCAG  271 (372)
Q Consensus       262 ~~d~vid~~g  271 (372)
                      ++|++|++.|
T Consensus        83 ~id~lvnnAg   92 (260)
T 2qq5_A           83 RLDVLVNNAY   92 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CceEEEECCc
Confidence            8999999984

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.12  E-value=0.023  Score=49.73  Aligned_cols=103  Identities=17%  Similarity=0.199  Sum_probs=68.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      +.+++|+|+|++|.+++..+...| ..+.++.++.++.+.+.+++.. ...+++                -..+|+||+|
T Consensus       118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt~~ka~~la~~~~~-~~~~~~----------------l~~~DiVIna  179 (269)
T 3phh_A          118 YQNALILGAGGSAKALACELKKQG-LQVSVLNRSSRGLDFFQRLGCD-CFMEPP----------------KSAFDLIINA  179 (269)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSCTTHHHHHHHTCE-EESSCC----------------SSCCSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHCCCe-EecHHH----------------hccCCEEEEc
Confidence            889999999999999999999999 5788888888877655477743 222211                1279999998


Q ss_pred             CCcHH----HH--HHHHHHhccCCEEEEEcCCCCCccccchhhhccCcE
Q 017426          270 AGLNK----TM--STALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD  312 (372)
Q Consensus       270 ~g~~~----~~--~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  312 (372)
                      ++...    .+  ......++++..++.+...+  ....+...-.+...
T Consensus       180 Tp~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~P--~T~ll~~A~~~G~~  226 (269)
T 3phh_A          180 TSASLHNELPLNKEVLKGYFKEGKLAYDLAYGF--LTPFLSLAKELKTP  226 (269)
T ss_dssp             CTTCCCCSCSSCHHHHHHHHHHCSEEEESCCSS--CCHHHHHHHHTTCC
T ss_pred             ccCCCCCCCCCChHHHHhhCCCCCEEEEeCCCC--chHHHHHHHHCcCE
Confidence            76420    11  12223677788777776554  33344444445443

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=96.11  E-value=0.028  Score=48.11  Aligned_cols=80  Identities=18%  Similarity=0.202  Sum_probs=49.5

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEE-EecChhHHHHH----HHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVI-VDVDDYRLSVA----KEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~-v~~~~~~~~~~----~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      |.++||+|+ |.+|..+++.+...|++ |++ ..+++++.+.+    +..+... .+..|-.+ +++.+.+.+..+ ..+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~-v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCK-VLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAID-AWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHH-HSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHH-HcC
Confidence            467899987 99999999999999995 555 56776654432    2234321 22222222 233344443332 245


Q ss_pred             cceEEEeCCC
Q 017426          262 GIDVSFDCAG  271 (372)
Q Consensus       262 ~~d~vid~~g  271 (372)
                      ++|++|++.|
T Consensus        79 ~id~li~~Ag   88 (244)
T 1edo_A           79 TIDVVVNNAG   88 (244)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            8999999876

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.10  E-value=0.022  Score=50.00  Aligned_cols=82  Identities=23%  Similarity=0.269  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---C---CC-eEEecCCCc-ccHHHHHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---G---AD-NIVKVSTNL-QDIAEEVEKIQKA  258 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g---~~-~v~~~~~~~-~~~~~~~~~~~~~  258 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+.+ +++   .   .. ..+..|-.+ .++.+.+.+..+.
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            3678999987 9999999999988998 577788887765533 333   2   11 122223222 2333334433322


Q ss_pred             cCCcceEEEeCCCc
Q 017426          259 MGTGIDVSFDCAGL  272 (372)
Q Consensus       259 ~~~~~d~vid~~g~  272 (372)
                       .+++|++|++.|.
T Consensus        84 -~g~id~lv~~Ag~   96 (278)
T 1spx_A           84 -FGKLDILVNNAGA   96 (278)
T ss_dssp             -HSCCCEEEECCC-
T ss_pred             -cCCCCEEEECCCC
Confidence             2589999998874

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=96.09  E-value=0.047  Score=47.41  Aligned_cols=82  Identities=12%  Similarity=0.264  Sum_probs=50.6

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCeEEEEecChh---HHHHH-HHhCCCeEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDDY---RLSVA-KEIGADNIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga---g~~G~~ai~l~~~~g~~~vv~v~~~~~---~~~~~-~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+   |.+|.++++.+...|+ .|++++++++   ..+.+ +..+....+..|-.+ +++.+.+.+..+. .
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~   84 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEA-F   84 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            3678999985   5899999998888898 5777777764   22222 223433333333322 2333334433322 2


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus        85 g~iD~lv~~Ag~   96 (261)
T 2wyu_A           85 GGLDYLVHAIAF   96 (261)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            589999998873

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=96.09  E-value=0.057  Score=48.70  Aligned_cols=80  Identities=21%  Similarity=0.281  Sum_probs=49.7

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecC-----hhHHHHH----HHhCCCe-EEecCCC-cccHHHHHHHHHH
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD-----DYRLSVA----KEIGADN-IVKVSTN-LQDIAEEVEKIQK  257 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~-----~~~~~~~----~~lg~~~-v~~~~~~-~~~~~~~~~~~~~  257 (372)
                      +.++||+|+ |++|.++++.+...|+ .|+++.++     +++.+.+    +..+... .+..|-. ..++.+.+.+..+
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            568999997 9999999999999999 56665554     3333322    2334322 2233322 2334444444433


Q ss_pred             HcCCcceEEEeCCC
Q 017426          258 AMGTGIDVSFDCAG  271 (372)
Q Consensus       258 ~~~~~~d~vid~~g  271 (372)
                      . .+++|++|++.|
T Consensus        84 ~-~g~iD~lVnnAG   96 (324)
T 3u9l_A           84 E-DGRIDVLIHNAG   96 (324)
T ss_dssp             H-HSCCSEEEECCC
T ss_pred             H-cCCCCEEEECCC
Confidence            2 358999999988

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=96.09  E-value=0.029  Score=48.36  Aligned_cols=82  Identities=17%  Similarity=0.247  Sum_probs=49.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEec-ChhHHHH----HHHhCCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLSV----AKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~-~~~~~~~----~~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ |.+|.++++.+...|++ |+++.+ ++++.+.    ++..+... .+..|-.+ ++..+.+.+..+. .
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~   80 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYN-VAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQ-F   80 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence            3578999987 99999999999999995 555444 5444332    23334332 22233222 2333344443332 3


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|+++++.|.
T Consensus        81 g~id~lv~nAg~   92 (246)
T 3osu_A           81 GSLDVLVNNAGI   92 (246)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            589999998874

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=96.09  E-value=0.041  Score=48.54  Aligned_cols=81  Identities=20%  Similarity=0.240  Sum_probs=50.1

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCeEEEEecChh---HHHHH-HHhCCCeEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDDY---RLSVA-KEIGADNIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga---g~~G~~ai~l~~~~g~~~vv~v~~~~~---~~~~~-~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .|.++||+|+   |++|.++++.+...|+ .|++++++++   ..+.+ +..+....+..|-.+ .+..+.+.+..+ ..
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~   97 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEE-NW   97 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH-HT
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHH-Hc
Confidence            4678999985   5899999999988998 5777777764   22222 223432333333322 233333443333 24


Q ss_pred             CcceEEEeCCC
Q 017426          261 TGIDVSFDCAG  271 (372)
Q Consensus       261 ~~~d~vid~~g  271 (372)
                      +++|++|++.|
T Consensus        98 g~iD~lv~~Ag  108 (285)
T 2p91_A           98 GSLDIIVHSIA  108 (285)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            68999999886

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.08  E-value=0.024  Score=48.94  Aligned_cols=77  Identities=21%  Similarity=0.237  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCc-ccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|++++++++.    +..+. ..+..|-.+ +++.+.+.+..+ ..+++|++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~----~~~~~-~~~~~D~~d~~~~~~~~~~~~~-~~g~id~l   78 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQ----EQYPF-ATEVMDVADAAQVAQVCQRLLA-ETERLDAL   78 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCS----SCCSS-EEEECCTTCHHHHHHHHHHHHH-HCSCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhh----hcCCc-eEEEcCCCCHHHHHHHHHHHHH-HcCCCCEE
Confidence            3678999998 9999999999999999 57777776542    22342 223333222 233344444333 24589999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      |++.|.
T Consensus        79 v~~Ag~   84 (250)
T 2fwm_X           79 VNAAGI   84 (250)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            998873

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.07  E-value=0.055  Score=47.62  Aligned_cols=99  Identities=15%  Similarity=0.172  Sum_probs=68.4

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh----CCC-eEEecCCCcccHHHHHHHHHH
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GAD-NIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      +...++++.+||-+|+|. |..+..+++..|. .|++++.+++..+.+++.    +.. .+....   .++.    ++  
T Consensus        58 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~---~d~~----~~--  126 (287)
T 1kpg_A           58 GKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLL---AGWE----QF--  126 (287)
T ss_dssp             TTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE---SCGG----GC--
T ss_pred             HHcCCCCcCEEEEECCcc-cHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEE---CChh----hC--
Confidence            446678999999999865 7788888877788 799999999988877653    321 121111   1211    11  


Q ss_pred             HcCCcceEEEeC-----CC---cHHHHHHHHHHhccCCEEEEEcC
Q 017426          258 AMGTGIDVSFDC-----AG---LNKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       258 ~~~~~~d~vid~-----~g---~~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                        .+.+|+|+..     .+   -...+..+.+.|+|+|.++....
T Consensus       127 --~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  169 (287)
T 1kpg_A          127 --DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI  169 (287)
T ss_dssp             --CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             --CCCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence              2579999864     22   23567788999999999987653

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.05  E-value=0.029  Score=49.23  Aligned_cols=116  Identities=13%  Similarity=0.099  Sum_probs=72.4

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCCCeEEecCCCcccHHHHHHHHHHH
Q 017426          180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       180 ~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      .+++...+..+.++||+|+|+.|.+++..+...|++.+.++.++.+|.+ +++.++.. .   ..   +.    .     
T Consensus       109 ~~l~~~~~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~-~---~~---~~----~-----  172 (271)
T 1npy_A          109 KLIEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-Y---IN---SL----E-----  172 (271)
T ss_dssp             HHHHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-E---ES---CC----T-----
T ss_pred             HHHHHhCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-c---ch---hh----h-----
Confidence            3444444456789999999999999999899999877888889877754 55667752 1   11   00    0     


Q ss_pred             cCCcceEEEeCCCcHHH-------HHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEE
Q 017426          259 MGTGIDVSFDCAGLNKT-------MSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDV  313 (372)
Q Consensus       259 ~~~~~d~vid~~g~~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i  313 (372)
                       ...+|+||+|++..-.       .......+.++..++.+...+.. ...+...-.++..+
T Consensus       173 -~~~~DivInaTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY~P~~-T~ll~~A~~~G~~~  232 (271)
T 1npy_A          173 -NQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVE-TPFIRYAQARGKQT  232 (271)
T ss_dssp             -TCCCSEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCSSSS-CHHHHHHHHTTCEE
T ss_pred             -cccCCEEEECCCCCccCccccCCCCCCHHHcCCCCEEEEeecCCCC-CHHHHHHHHCCCEE
Confidence             1469999999875311       01113456666767776543333 33444444455443

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.05  E-value=0.023  Score=47.85  Aligned_cols=91  Identities=12%  Similarity=0.140  Sum_probs=59.7

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCC
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  270 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  270 (372)
                      +|||+|+ |.+|..+++.+...|. .|+++.+++++.+.+...+... +..|-.+.+.    ..+     .++|+||++.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~-~~~D~~d~~~----~~~-----~~~d~vi~~a   70 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVAT-LVKEPLVLTE----ADL-----DSVDAVVDAL   70 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSEE-EECCGGGCCH----HHH-----TTCSEEEECC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCceE-EecccccccH----hhc-----ccCCEEEECC
Confidence            5899998 9999999999999998 5788888887766543334432 3223222222    222     5799999998


Q ss_pred             CcH----------HHHHHHHHHhcc-CCEEEEEc
Q 017426          271 GLN----------KTMSTALGATCA-GGKVCLVG  293 (372)
Q Consensus       271 g~~----------~~~~~~~~~l~~-~G~~v~~g  293 (372)
                      |..          .....+++.++. +++++.++
T Consensus        71 g~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S  104 (224)
T 3h2s_A           71 SVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFIL  104 (224)
T ss_dssp             CCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred             ccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence            761          123345555543 36888775

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.05  E-value=0.0089  Score=51.23  Aligned_cols=95  Identities=15%  Similarity=0.170  Sum_probs=59.5

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .+|||+|+ |.+|.++++.+...| + .|+++.+++++.+.+...++. ++..|-.  + .+.+.+..    .++|++|.
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~~~~~-~~~~Dl~--d-~~~~~~~~----~~~D~vv~   94 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYPTNSQ-IIMGDVL--N-HAALKQAM----QGQDIVYA   94 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCCTTEE-EEECCTT--C-HHHHHHHH----TTCSEEEE
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhcccccCCcE-EEEecCC--C-HHHHHHHh----cCCCEEEE
Confidence            57999997 999999999999999 6 677777877654322211222 2222222  2 22344443    47899999


Q ss_pred             CCCcHH---HHHHHHHHhccC--CEEEEEcC
Q 017426          269 CAGLNK---TMSTALGATCAG--GKVCLVGM  294 (372)
Q Consensus       269 ~~g~~~---~~~~~~~~l~~~--G~~v~~g~  294 (372)
                      +.+...   ..+.+++.++..  ++++.++.
T Consensus        95 ~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS  125 (236)
T 3qvo_A           95 NLTGEDLDIQANSVIAAMKACDVKRLIFVLS  125 (236)
T ss_dssp             ECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             cCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence            888642   233455555443  68888764

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.05  E-value=0.046  Score=47.12  Aligned_cols=99  Identities=20%  Similarity=0.235  Sum_probs=68.0

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCC---eEEecCCCcccHHHHHHH
Q 017426          182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD---NIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       182 l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~~~~  254 (372)
                      +....++++.+||-.|+|. |..+..+++..|. .+++++.+++..+.+++    .|..   .+...+.  .++      
T Consensus        29 ~~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~--~~~------   98 (256)
T 1nkv_A           29 GRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA--AGY------   98 (256)
T ss_dssp             HHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC--TTC------
T ss_pred             HHhcCCCCCCEEEEECCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECCh--HhC------
Confidence            4557788999999999865 7888889988887 68999999987776654    3432   1221111  111      


Q ss_pred             HHHHcCCcceEEEeC-----C-CcHHHHHHHHHHhccCCEEEEEc
Q 017426          255 IQKAMGTGIDVSFDC-----A-GLNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       255 ~~~~~~~~~d~vid~-----~-g~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                       .  ..+.||+|+..     . .-...+..+.+.|+|+|+++...
T Consensus        99 -~--~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A           99 -V--ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             -C--CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             -C--cCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence             0  13579999852     1 22356778888999999988754

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.04  E-value=0.045  Score=51.17  Aligned_cols=96  Identities=16%  Similarity=0.159  Sum_probs=67.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .+.+|+|+|.|.+|+.+++.++..|. .|++++.++++.+.+++.|...+. -+..+.+   .+++.   +-..+|+++-
T Consensus         3 ~~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~-GDat~~~---~L~~a---gi~~A~~viv   74 (413)
T 3l9w_A            3 HGMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFY-GDATRMD---LLESA---GAAKAEVLIN   74 (413)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEE-SCTTCHH---HHHHT---TTTTCSEEEE
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEE-cCCCCHH---HHHhc---CCCccCEEEE
Confidence            34679999999999999999999998 588999999999999998876433 2222222   23222   3467999999


Q ss_pred             CCCcHHHHH---HHHHHhccCCEEEEE
Q 017426          269 CAGLNKTMS---TALGATCAGGKVCLV  292 (372)
Q Consensus       269 ~~g~~~~~~---~~~~~l~~~G~~v~~  292 (372)
                      +++....-.   ...+.+.+.-+++.-
T Consensus        75 ~~~~~~~n~~i~~~ar~~~p~~~Iiar  101 (413)
T 3l9w_A           75 AIDDPQTNLQLTEMVKEHFPHLQIIAR  101 (413)
T ss_dssp             CCSSHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred             CCCChHHHHHHHHHHHHhCCCCeEEEE
Confidence            998754322   234445566666654

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=96.03  E-value=0.12  Score=46.93  Aligned_cols=131  Identities=15%  Similarity=0.135  Sum_probs=82.5

Q ss_pred             EEEEECCCHHHHH-HHHHHHH-cCCCeEEEEecChhHHH-HHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          192 NVLIMGAGPIGLV-TMLAARA-FGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       192 ~vlI~Gag~~G~~-ai~l~~~-~g~~~vv~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      ++-|+|+|.+|.. .+...+. -+++.+.++++++++.+ +++++|...+.      .++.    ++.+  ...+|+|+-
T Consensus        25 rigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y------~d~~----ell~--~~~iDaV~I   92 (350)
T 4had_A           25 RFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAF------GSYE----EMLA--SDVIDAVYI   92 (350)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEE------SSHH----HHHH--CSSCSEEEE
T ss_pred             EEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeee------CCHH----HHhc--CCCCCEEEE
Confidence            7889999999975 4555555 46765556678777654 56789987653      2333    3332  367999999


Q ss_pred             CCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhh----hccCcEE-Eee-ccCCCcHHHHHHHHHcCCC
Q 017426          269 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPA----AVREVDV-VGV-FRYKNTWPLCLELLRSGKI  335 (372)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~----~~~~~~i-~~~-~~~~~~~~~~~~ll~~g~~  335 (372)
                      |+....+.+.+..+|. .|+-|.+.-.-....-....+    -.+++.+ .+. ..+...+..+.+++++|.+
T Consensus        93 ~tP~~~H~~~~~~al~-aGkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~k~~i~~G~i  164 (350)
T 4had_A           93 PLPTSQHIEWSIKAAD-AGKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAYMITYSPVWQKVRSLIDEGAI  164 (350)
T ss_dssp             CSCGGGHHHHHHHHHH-TTCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTTTT
T ss_pred             eCCCchhHHHHHHHHh-cCCEEEEeCCcccchhhHHHHHHHHHHcCCceeEeeeeecCHHHHHhhHhhhcCCC
Confidence            9998778888888887 577777753221111111111    1222222 222 2236678888999999887

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=96.02  E-value=0.029  Score=47.45  Aligned_cols=99  Identities=16%  Similarity=0.138  Sum_probs=65.9

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHHH----hC-----CCeEEecCCCcccHHHHHHHH
Q 017426          186 NIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKE----IG-----ADNIVKVSTNLQDIAEEVEKI  255 (372)
Q Consensus       186 ~~~~g~~vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~~----lg-----~~~v~~~~~~~~~~~~~~~~~  255 (372)
                      .++++++||-.|+|. |..+..+++..|. ..|++++.+++..+.+++    .+     ...+.....   +....   .
T Consensus        74 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~---d~~~~---~  146 (226)
T 1i1n_A           74 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG---DGRMG---Y  146 (226)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES---CGGGC---C
T ss_pred             hCCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEEC---CcccC---c
Confidence            478999999999865 7888888888763 279999999988777654    22     122211111   11100   0


Q ss_pred             HHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEc
Q 017426          256 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       256 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      .  ....||+|+........+..+.+.|+++|+++..-
T Consensus       147 ~--~~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~  182 (226)
T 1i1n_A          147 A--EEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPV  182 (226)
T ss_dssp             G--GGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             c--cCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence            0  13579999876655556678889999999988753

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.02  E-value=0.044  Score=48.06  Aligned_cols=82  Identities=22%  Similarity=0.282  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhH-----------HHHHHHhCCCe-EEecCCCc-ccHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR-----------LSVAKEIGADN-IVKVSTNL-QDIAEEVEK  254 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~-----------~~~~~~lg~~~-v~~~~~~~-~~~~~~~~~  254 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+.+++++++           .+.++..+... .+..|-.+ .+..+.+.+
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            4678999987 9999999999999999 57777776542           12223334322 22233222 233333444


Q ss_pred             HHHHcCCcceEEEeCCCc
Q 017426          255 IQKAMGTGIDVSFDCAGL  272 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~  272 (372)
                      +.+. .+++|++|++.|.
T Consensus        84 ~~~~-~g~iD~lvnnAG~  100 (274)
T 3e03_A           84 TVDT-FGGIDILVNNASA  100 (274)
T ss_dssp             HHHH-HSCCCEEEECCCC
T ss_pred             HHHH-cCCCCEEEECCCc
Confidence            3332 3589999999874

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=96.01  E-value=0.013  Score=51.74  Aligned_cols=94  Identities=14%  Similarity=0.094  Sum_probs=58.7

Q ss_pred             EEEEECC-CHHHHHHHHHHHHc-CCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          192 NVLIMGA-GPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      +|||+|+ |.+|..+++.+... |.+ |+++.+++++...+...++. ++..|-.+   .+.+.+..    .++|+||.+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~-V~~~~R~~~~~~~~~~~~v~-~~~~D~~d---~~~l~~~~----~~~d~vi~~   72 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDH-FHIGVRNVEKVPDDWRGKVS-VRQLDYFN---QESMVEAF----KGMDTVVFI   72 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTT-EEEEESSGGGSCGGGBTTBE-EEECCTTC---HHHHHHHT----TTCSEEEEC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCc-EEEEECCHHHHHHhhhCCCE-EEEcCCCC---HHHHHHHH----hCCCEEEEe
Confidence            5899998 99999999998887 885 67777777665433333433 22222222   22344432    589999998


Q ss_pred             CCcH-------HHHHHHHHHhccC--CEEEEEcC
Q 017426          270 AGLN-------KTMSTALGATCAG--GKVCLVGM  294 (372)
Q Consensus       270 ~g~~-------~~~~~~~~~l~~~--G~~v~~g~  294 (372)
                      .+..       .....+++.++..  ++++.++.
T Consensus        73 a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss  106 (289)
T 3e48_A           73 PSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY  106 (289)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             CCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence            8742       2234455555544  47887764

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=96.01  E-value=0.036  Score=48.40  Aligned_cols=79  Identities=18%  Similarity=0.215  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHh---CC-Ce--EEecCCCcccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI---GA-DN--IVKVSTNLQDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~l---g~-~~--v~~~~~~~~~~~~~~~~~~~~~~  260 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+++++++++.+. ++++   +. ..  .+..|-.+.   +.+.++.+. -
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~---~~~~~~~~~-~   83 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTE---QGCQDVIEK-Y   83 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSH---HHHHHHHHH-C
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCH---HHHHHHHHh-c
Confidence            4678999987 9999999999999999 57788888766443 2222   21 11  122222222   223333332 3


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|+++++.|.
T Consensus        84 g~id~lv~nAg~   95 (267)
T 3t4x_A           84 PKVDILINNLGI   95 (267)
T ss_dssp             CCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            689999998874

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=96.01  E-value=0.041  Score=49.71  Aligned_cols=82  Identities=16%  Similarity=0.025  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe-cChhHHHHH-HH----hCCC-eEEecCCCc-c-------------
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD-VDDYRLSVA-KE----IGAD-NIVKVSTNL-Q-------------  246 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~-~~~~~~~~~-~~----lg~~-~v~~~~~~~-~-------------  246 (372)
                      .+.++||+|+ +++|.++++.+...|+ .|++++ +++++.+.+ ++    .+.. ..+..|-.+ .             
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            4678999987 9999999999999999 577777 777665433 22    2322 122223222 2             


Q ss_pred             ----cHHHHHHHHHHHcCCcceEEEeCCCc
Q 017426          247 ----DIAEEVEKIQKAMGTGIDVSFDCAGL  272 (372)
Q Consensus       247 ----~~~~~~~~~~~~~~~~~d~vid~~g~  272 (372)
                          ++.+.+.++.+. .+++|++|++.|.
T Consensus       124 ~~~~~v~~~~~~~~~~-~g~iD~lVnnAG~  152 (328)
T 2qhx_A          124 TLFTRCAELVAACYTH-WGRCDVLVNNASS  152 (328)
T ss_dssp             CHHHHHHHHHHHHHHH-HSCCCEEEECCCC
T ss_pred             ccHHHHHHHHHHHHHh-cCCCCEEEECCCC
Confidence                344444443332 3589999998873

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.00  E-value=0.025  Score=48.85  Aligned_cols=82  Identities=23%  Similarity=0.272  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecC-hhHHH-HHHHh---CCC-eEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD-DYRLS-VAKEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~-~~~~~-~~~~l---g~~-~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ |.+|..+++.+...|+ .|++++++ +++.+ ..+++   +.. ..+..|-.+ +++.+.+.++.+. .
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   83 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAK-F   83 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            3678999987 9999999999999999 57777676 54433 22322   422 122223222 2333344433322 2


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus        84 g~id~vi~~Ag~   95 (258)
T 3afn_B           84 GGIDVLINNAGG   95 (258)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            589999998874

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=96.00  E-value=0.045  Score=48.50  Aligned_cols=82  Identities=16%  Similarity=0.035  Sum_probs=52.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe-cChhHHHHH-HH----hCCCe-EEecCCCc-c-------------
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD-VDDYRLSVA-KE----IGADN-IVKVSTNL-Q-------------  246 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~-~~~~~~~~~-~~----lg~~~-v~~~~~~~-~-------------  246 (372)
                      .+.++||+|+ +++|.++++.+...|+ .|++++ +++++.+.+ ++    .+... .+..|-.+ .             
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV   86 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccccc
Confidence            3678999987 9999999999999999 577777 777654432 22    24221 22222222 2             


Q ss_pred             ----cHHHHHHHHHHHcCCcceEEEeCCCc
Q 017426          247 ----DIAEEVEKIQKAMGTGIDVSFDCAGL  272 (372)
Q Consensus       247 ----~~~~~~~~~~~~~~~~~d~vid~~g~  272 (372)
                          +..+.+.+..+. .+++|++|++.|.
T Consensus        87 ~~~~~v~~~~~~~~~~-~g~iD~lvnnAg~  115 (291)
T 1e7w_A           87 TLFTRCAELVAACYTH-WGRCDVLVNNASS  115 (291)
T ss_dssp             CHHHHHHHHHHHHHHH-HSCCCEEEECCCC
T ss_pred             chHHHHHHHHHHHHHh-cCCCCEEEECCCC
Confidence                344444444332 3589999998873

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=95.99  E-value=0.02  Score=49.63  Aligned_cols=76  Identities=20%  Similarity=0.205  Sum_probs=48.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCc-ccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++.+++++.+.      ...+..|-.+ +++.+.+.+..+ ..+++|++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~------~~~~~~Dl~d~~~v~~~~~~~~~-~~g~iD~l   91 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPEG------FLAVKCDITDTEQVEQAYKEIEE-THGPVEVL   91 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTT------SEEEECCTTSHHHHHHHHHHHHH-HTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHhhcc------ceEEEecCCCHHHHHHHHHHHHH-HcCCCCEE
Confidence            3678999998 9999999999999998 57777676544321      2233333222 233334444333 24679999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      |++.|.
T Consensus        92 v~nAg~   97 (253)
T 2nm0_A           92 IANAGV   97 (253)
T ss_dssp             EEECSC
T ss_pred             EECCCC
Confidence            998763

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=95.99  E-value=0.059  Score=49.35  Aligned_cols=101  Identities=16%  Similarity=0.170  Sum_probs=66.2

Q ss_pred             HHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecC----hhH---------HHHHHHhCCCeEEecCCCc
Q 017426          180 HACRRAN-IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD----DYR---------LSVAKEIGADNIVKVSTNL  245 (372)
Q Consensus       180 ~~l~~~~-~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~----~~~---------~~~~~~lg~~~v~~~~~~~  245 (372)
                      .+++..+ --++.+|+|.|+|..|..+++++..+|++++++++++    .+|         .++++..+..      ...
T Consensus       181 ~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~------~~~  254 (388)
T 1vl6_A          181 NALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPE------RLS  254 (388)
T ss_dssp             HHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTT------CCC
T ss_pred             HHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhcc------Cch
Confidence            3345433 2356899999999999999999999999889999887    544         4444443321      112


Q ss_pred             ccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcC
Q 017426          246 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      .++.+.+        .++|++|.+++....-+..++.|+++..++.++.
T Consensus       255 ~~L~eav--------~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSN  295 (388)
T 1vl6_A          255 GDLETAL--------EGADFFIGVSRGNILKPEWIKKMSRKPVIFALAN  295 (388)
T ss_dssp             SCHHHHH--------TTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCS
T ss_pred             hhHHHHH--------ccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCC
Confidence            3444443        4589999988743233456677887665444443

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=95.98  E-value=0.028  Score=48.76  Aligned_cols=79  Identities=18%  Similarity=0.371  Sum_probs=48.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCe-EEecCCCcc-cHHHHHHHHHHHcCCcceE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN-IVKVSTNLQ-DIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~-v~~~~~~~~-~~~~~~~~~~~~~~~~~d~  265 (372)
                      .+.++||+|+ +++|.++++.+...|+ .|++++++.+  +..++++... .+..|-.+. +..+.+....+  .+++|+
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~--~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~--~g~id~   82 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGE--DVVADLGDRARFAAADVTDEAAVASALDLAET--MGTLRI   82 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCH--HHHHHTCTTEEEEECCTTCHHHHHHHHHHHHH--HSCEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchH--HHHHhcCCceEEEECCCCCHHHHHHHHHHHHH--hCCCCE
Confidence            3678999997 9999999999989999 5666666443  3344555332 222332222 23333333322  368999


Q ss_pred             EEeCCCc
Q 017426          266 SFDCAGL  272 (372)
Q Consensus       266 vid~~g~  272 (372)
                      +|++.|.
T Consensus        83 lv~nAg~   89 (257)
T 3tl3_A           83 VVNCAGT   89 (257)
T ss_dssp             EEECGGG
T ss_pred             EEECCCC
Confidence            9999873

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=95.98  E-value=0.04  Score=49.49  Aligned_cols=82  Identities=20%  Similarity=0.193  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecC------------hhHHH----HHHHhCCCe-EEecCCCc-ccHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD------------DYRLS----VAKEIGADN-IVKVSTNL-QDIA  249 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~------------~~~~~----~~~~lg~~~-v~~~~~~~-~~~~  249 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|++++++            .++.+    .+++.+... .+..|-.+ .+..
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            5788999987 9999999999999999 56666554            33322    223344332 22233222 2333


Q ss_pred             HHHHHHHHHcCCcceEEEeCCCc
Q 017426          250 EEVEKIQKAMGTGIDVSFDCAGL  272 (372)
Q Consensus       250 ~~~~~~~~~~~~~~d~vid~~g~  272 (372)
                      +.+.+..+. .+++|++|++.|.
T Consensus       124 ~~~~~~~~~-~g~iD~lVnnAg~  145 (317)
T 3oec_A          124 AVVDEALAE-FGHIDILVSNVGI  145 (317)
T ss_dssp             HHHHHHHHH-HSCCCEEEECCCC
T ss_pred             HHHHHHHHH-cCCCCEEEECCCC
Confidence            344443332 3589999998873

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=95.97  E-value=0.031  Score=48.79  Aligned_cols=76  Identities=18%  Similarity=0.261  Sum_probs=48.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCc-ccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++     . +-...+..|-.+ +++.+.+.+..+. .+++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-----~-~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g~iD~l   78 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG-----E-AKYDHIECDVTNPDQVKASIDHIFKE-YGSISVL   78 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC-----S-CSSEEEECCTTCHHHHHHHHHHHHHH-HSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc-----C-CceEEEEecCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            3678999997 9999999999999999 57777776554     1 111223233222 2333344433322 2579999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      |++.|.
T Consensus        79 v~~Ag~   84 (264)
T 2dtx_A           79 VNNAGI   84 (264)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            998873

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=95.95  E-value=0.036  Score=47.55  Aligned_cols=82  Identities=21%  Similarity=0.276  Sum_probs=48.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE-ecChhHHHH----HHHhCCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSV----AKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v-~~~~~~~~~----~~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ |.+|..+++.+...|++ |+++ .+++++.+.    ++..+... .+..|-.+ +++.+.+.+..+. .
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~-V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   81 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGAN-IVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDA-F   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHh-c
Confidence            3678999987 99999999999999984 6666 555544332    22334322 22233222 2333334333322 2


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus        82 ~~~d~vi~~Ag~   93 (247)
T 2hq1_A           82 GRIDILVNNAGI   93 (247)
T ss_dssp             SCCCEEEECC--
T ss_pred             CCCCEEEECCCC
Confidence            589999998874

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=95.94  E-value=0.058  Score=48.21  Aligned_cols=100  Identities=17%  Similarity=0.233  Sum_probs=68.6

Q ss_pred             HhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCC---eEEecCCCcccHHHHHHH
Q 017426          183 RRAN-IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD---NIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       183 ~~~~-~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~~~~  254 (372)
                      +... ++++++||-.|+|. |..+..+++..|. .|++++.+++..+.+++    .|..   .++.-+.....+      
T Consensus       110 ~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------  181 (312)
T 3vc1_A          110 DHLGQAGPDDTLVDAGCGR-GGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPF------  181 (312)
T ss_dssp             TTSCCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC------
T ss_pred             HHhccCCCCCEEEEecCCC-CHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCC------
Confidence            3344 78999999999864 7788888887777 69999999988777655    3432   122211111110      


Q ss_pred             HHHHcCCcceEEEeC-----CCcHHHHHHHHHHhccCCEEEEEcC
Q 017426          255 IQKAMGTGIDVSFDC-----AGLNKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       255 ~~~~~~~~~d~vid~-----~g~~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                          ..+.||+|+..     .+-...+..+.+.|+|+|+++....
T Consensus       182 ----~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~  222 (312)
T 3vc1_A          182 ----DKGAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITG  222 (312)
T ss_dssp             ----CTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ----CCCCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence                13689999763     3334678889999999999998753

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=95.94  E-value=0.023  Score=49.14  Aligned_cols=76  Identities=21%  Similarity=0.290  Sum_probs=48.8

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCe-EEecCCCcccHHHHHHHHHHH---cCCcceE
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADN-IVKVSTNLQDIAEEVEKIQKA---MGTGIDV  265 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-v~~~~~~~~~~~~~~~~~~~~---~~~~~d~  265 (372)
                      ++||+|+ |++|.++++.+...|+ .|+++++++++.+.+ ++++... .+..|-.+.   +.+.++.+.   ..+++|+
T Consensus         2 ~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~---~~v~~~~~~~~~~~g~iD~   77 (248)
T 3asu_A            2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNR---AAIEEMLASLPAEWCNIDI   77 (248)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCH---HHHHHHHHTSCTTTCCCCE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCH---HHHHHHHHHHHHhCCCCCE
Confidence            6888987 9999999999999998 577778887765543 4455322 222332222   223333221   1357999


Q ss_pred             EEeCCC
Q 017426          266 SFDCAG  271 (372)
Q Consensus       266 vid~~g  271 (372)
                      +|++.|
T Consensus        78 lvnnAg   83 (248)
T 3asu_A           78 LVNNAG   83 (248)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999876

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=95.93  E-value=0.022  Score=49.37  Aligned_cols=77  Identities=16%  Similarity=0.068  Sum_probs=50.8

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH---HhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK---EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~---~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .++||+|+ |.+|.++++.+...|+ .|+++++++++.+.+.   ..+..... +  +..+..+.+.+..+. .+++|++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~-~--d~~~v~~~~~~~~~~-~g~iD~l   76 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKP-M--SEQEPAELIEAVTSA-YGQVDVL   76 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEE-C--CCCSHHHHHHHHHHH-HSCCCEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCcEEE-E--CHHHHHHHHHHHHHH-hCCCCEE
Confidence            36899987 9999999999999999 5777777776554433   33433222 1  224444444444332 2589999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      |++.|.
T Consensus        77 v~nAg~   82 (254)
T 1zmt_A           77 VSNDIF   82 (254)
T ss_dssp             EEECCC
T ss_pred             EECCCc
Confidence            998763

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=95.91  E-value=0.038  Score=47.26  Aligned_cols=80  Identities=19%  Similarity=0.173  Sum_probs=49.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE-ecChhHHHHH-H---HhCCCe-E-EecCCCc-ccHHHHHHHHHHHcC
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSVA-K---EIGADN-I-VKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v-~~~~~~~~~~-~---~lg~~~-v-~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      +.++||+|+ |.+|..+++.+...|++ |+++ .+++++.+.+ +   ..+... . +..|-.+ ++..+.+.++.+. .
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~-v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFA-LAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEV-L   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCE-EEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHh-c
Confidence            357899988 99999999999999984 6665 7777665432 2   224322 2 3333222 2233333333222 2


Q ss_pred             CcceEEEeCCC
Q 017426          261 TGIDVSFDCAG  271 (372)
Q Consensus       261 ~~~d~vid~~g  271 (372)
                      +++|++|++.|
T Consensus        79 ~~~d~li~~Ag   89 (245)
T 2ph3_A           79 GGLDTLVNNAG   89 (245)
T ss_dssp             TCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            57999999887

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=95.91  E-value=0.031  Score=46.77  Aligned_cols=100  Identities=20%  Similarity=0.157  Sum_probs=69.1

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcce
Q 017426          185 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       185 ~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d  264 (372)
                      ..++++.+||-.|+|. |..+..+++. |. .+++++.+++..+.+++.+...+......-.++         ...+.+|
T Consensus        42 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~---------~~~~~~D  109 (218)
T 3ou2_A           42 RAGNIRGDVLELASGT-GYWTRHLSGL-AD-RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW---------TPDRQWD  109 (218)
T ss_dssp             TTTTSCSEEEEESCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC---------CCSSCEE
T ss_pred             hcCCCCCeEEEECCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHhcCCCCeEEEecccccC---------CCCCcee
Confidence            4477888999999864 7777777777 76 799999999999998886643332211111111         1246899


Q ss_pred             EEEeCCC-----c---HHHHHHHHHHhccCCEEEEEcCCC
Q 017426          265 VSFDCAG-----L---NKTMSTALGATCAGGKVCLVGMGH  296 (372)
Q Consensus       265 ~vid~~g-----~---~~~~~~~~~~l~~~G~~v~~g~~~  296 (372)
                      +|+....     .   ...+..+.+.|+++|.++......
T Consensus       110 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~  149 (218)
T 3ou2_A          110 AVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD  149 (218)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred             EEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence            9986432     2   346778889999999998876433

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.91  E-value=0.034  Score=48.12  Aligned_cols=83  Identities=19%  Similarity=0.193  Sum_probs=49.1

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe-cChhH-HH---HHHHhCCC-eEEecCCCc-ccHHHHHHHHHHHc
Q 017426          188 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD-VDDYR-LS---VAKEIGAD-NIVKVSTNL-QDIAEEVEKIQKAM  259 (372)
Q Consensus       188 ~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~-~~~~~-~~---~~~~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~  259 (372)
                      .++.++||+|+ +++|.++++.+...|++ |+++. ++.++ .+   .+++.+.. ..+..|-.+ ++..+.+.++.+ .
T Consensus        11 ~~~k~vlITGas~giG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-~   88 (256)
T 3ezl_A           11 MSQRIAYVTGGMGGIGTSICQRLHKDGFR-VVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA-E   88 (256)
T ss_dssp             --CEEEEETTTTSHHHHHHHHHHHHTTEE-EEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH-H
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH-h
Confidence            46778999987 99999999999999995 55544 43332 22   23334432 222233222 233344444433 2


Q ss_pred             CCcceEEEeCCCc
Q 017426          260 GTGIDVSFDCAGL  272 (372)
Q Consensus       260 ~~~~d~vid~~g~  272 (372)
                      .+++|++|++.|.
T Consensus        89 ~g~id~lv~~Ag~  101 (256)
T 3ezl_A           89 VGEIDVLVNNAGI  101 (256)
T ss_dssp             TCCEEEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            4589999998873

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=95.91  E-value=0.047  Score=47.60  Aligned_cols=81  Identities=19%  Similarity=0.220  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEec-ChhHHHH----HHHhCCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLSV----AKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~-~~~~~~~----~~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++.+ ++++.+.    ++..+... .+..|-.+ .++.+.+.++.+. .
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   97 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH-F   97 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-c
Confidence            4678999987 9999999999999998 4666666 6555432    22335432 22233222 2333334333322 2


Q ss_pred             CcceEEEeCCC
Q 017426          261 TGIDVSFDCAG  271 (372)
Q Consensus       261 ~~~d~vid~~g  271 (372)
                      +++|++|++.|
T Consensus        98 ~~~d~vi~~Ag  108 (274)
T 1ja9_A           98 GGLDFVMSNSG  108 (274)
T ss_dssp             SCEEEEECCCC
T ss_pred             CCCCEEEECCC
Confidence            58999999876

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=95.90  E-value=0.023  Score=49.18  Aligned_cols=102  Identities=19%  Similarity=0.213  Sum_probs=66.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHH----hCCCe-EEecCCCcccHHHHHHHHHHHc
Q 017426          186 NIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGADN-IVKVSTNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       186 ~~~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~-v~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      ...++.+||-+|+|. |..+..+++..+ ...|++++.+++..+.+++    .|... +...   ..+..+.+..+  ..
T Consensus        60 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~---~~d~~~~l~~~--~~  133 (248)
T 3tfw_A           60 RLTQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLR---EGPALQSLESL--GE  133 (248)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEE---ESCHHHHHHTC--CS
T ss_pred             hhcCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE---EcCHHHHHHhc--CC
Confidence            345678999999864 788888888864 4489999999988877655    35432 2111   12333322221  01


Q ss_pred             CCcceEEEeCCCc---HHHHHHHHHHhccCCEEEEEc
Q 017426          260 GTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       260 ~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      .+.||+||-....   ...+..+.+.|+++|.++.-.
T Consensus       134 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~  170 (248)
T 3tfw_A          134 CPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDN  170 (248)
T ss_dssp             CCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred             CCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeC
Confidence            2479999933222   346778889999999888754

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=95.90  E-value=0.026  Score=49.88  Aligned_cols=81  Identities=19%  Similarity=0.166  Sum_probs=49.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh-hHHH-HHHH----hCCCe-EEecCCCc-----ccHHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD-YRLS-VAKE----IGADN-IVKVSTNL-----QDIAEEVEKI  255 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~-~~~~-~~~~----lg~~~-v~~~~~~~-----~~~~~~~~~~  255 (372)
                      .+.++||+|+ +++|.++++.+...|+ .|+++++++ ++.+ ..++    .+... .+..|-.+     .++.+.+.++
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            4678999987 9999999999989999 577776766 5433 2222    23222 22233222     2233333333


Q ss_pred             HHHcCCcceEEEeCCC
Q 017426          256 QKAMGTGIDVSFDCAG  271 (372)
Q Consensus       256 ~~~~~~~~d~vid~~g  271 (372)
                      .+. .+++|++|++.|
T Consensus       101 ~~~-~g~iD~lvnnAG  115 (288)
T 2x9g_A          101 FRA-FGRCDVLVNNAS  115 (288)
T ss_dssp             HHH-HSCCCEEEECCC
T ss_pred             HHh-cCCCCEEEECCC
Confidence            222 358999999877

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=95.90  E-value=0.029  Score=49.72  Aligned_cols=82  Identities=23%  Similarity=0.290  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCC--CeEEEEecChhHHHHHH-Hh-----CCCe-EEecCCCc-ccHHHHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGA--PRIVIVDVDDYRLSVAK-EI-----GADN-IVKVSTNL-QDIAEEVEKIQK  257 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~--~~vv~v~~~~~~~~~~~-~l-----g~~~-v~~~~~~~-~~~~~~~~~~~~  257 (372)
                      .|.++||+|+ +++|.++++.+...|+  ..|+.+.+++++.+.+. ++     +... .+..|-.+ ++..+.+.++.+
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            3679999987 9999998887776665  26777888887655432 22     3221 22223222 333333333322


Q ss_pred             HcCCcceEEEeCCC
Q 017426          258 AMGTGIDVSFDCAG  271 (372)
Q Consensus       258 ~~~~~~d~vid~~g  271 (372)
                       ..+++|++|++.|
T Consensus       112 -~~g~iD~lVnnAG  124 (287)
T 3rku_A          112 -EFKDIDILVNNAG  124 (287)
T ss_dssp             -GGCSCCEEEECCC
T ss_pred             -hcCCCCEEEECCC
Confidence             2358999999887

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=95.89  E-value=0.05  Score=47.17  Aligned_cols=82  Identities=17%  Similarity=0.255  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhH-HHHHHH----hCCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR-LSVAKE----IGADN-IVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~-~~~~~~----lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|++++++.++ .+.+++    .+... .+..|-.+ +++.+.+.++.+ ..
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~   90 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA-DL   90 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHH-hc
Confidence            3568999998 9999999999989998 57777664332 222222    34322 22223222 233344444332 23


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus        91 ~~id~li~~Ag~  102 (265)
T 1h5q_A           91 GPISGLIANAGV  102 (265)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            579999998874

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.87  E-value=0.084  Score=43.91  Aligned_cols=98  Identities=12%  Similarity=0.017  Sum_probs=61.9

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh-CC---------------C--eEEecCCC
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-GA---------------D--NIVKVSTN  244 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l-g~---------------~--~v~~~~~~  244 (372)
                      ....++++.+||..|+|. |..+..+++. |+ .|++++.+++-.+.+++. +.               .  .++.-+-.
T Consensus        16 ~~l~~~~~~~vLD~GCG~-G~~~~~la~~-g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~   92 (203)
T 1pjz_A           16 SSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF   92 (203)
T ss_dssp             HHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred             HhcccCCCCEEEEeCCCC-cHhHHHHHHC-CC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccc
Confidence            445567899999998864 6777777776 87 799999999988877653 21               1  11211111


Q ss_pred             cccHHHHHHHHHHHcCCcceEEEeCC-----CcH---HHHHHHHHHhccCCEEEEE
Q 017426          245 LQDIAEEVEKIQKAMGTGIDVSFDCA-----GLN---KTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~d~vid~~-----g~~---~~~~~~~~~l~~~G~~v~~  292 (372)
                      ..++.+         .+.||+|++..     ...   ..+..+.+.|+|+|+++.+
T Consensus        93 ~l~~~~---------~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~  139 (203)
T 1pjz_A           93 ALTARD---------IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI  139 (203)
T ss_dssp             SSTHHH---------HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred             cCCccc---------CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence            111110         14799999732     211   2456788899999994433

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.87  E-value=0.059  Score=47.61  Aligned_cols=87  Identities=14%  Similarity=0.121  Sum_probs=58.9

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCC
Q 017426          191 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  270 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  270 (372)
                      .+|.|+|+|.+|...++.+...|. .|++.++++++.+.+.+.|+...       .+..+.+        ...|+||-|+
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~--------~~aDvvi~~v   65 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGAERA-------ATPCEVV--------ESCPVTFAML   65 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC-------SSHHHHH--------HHCSEEEECC
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-------CCHHHHH--------hcCCEEEEEc
Confidence            478899999999999999999998 68888999998888777765321       1222222        2468888888


Q ss_pred             CcHHHHHHHH-------HHhccCCEEEEEc
Q 017426          271 GLNKTMSTAL-------GATCAGGKVCLVG  293 (372)
Q Consensus       271 g~~~~~~~~~-------~~l~~~G~~v~~g  293 (372)
                      ..+......+       ..++++..++..+
T Consensus        66 p~~~~~~~v~~~~~~l~~~l~~~~~vi~~s   95 (287)
T 3pef_A           66 ADPAAAEEVCFGKHGVLEGIGEGRGYVDMS   95 (287)
T ss_dssp             SSHHHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred             CCHHHHHHHHcCcchHhhcCCCCCEEEeCC
Confidence            7544444433       4455555555543

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=95.86  E-value=0.052  Score=48.19  Aligned_cols=86  Identities=14%  Similarity=0.106  Sum_probs=60.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCC
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  271 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  271 (372)
                      +|.|+|+|.+|...+..+...|. .|.+.++++++.+.+.+.|...   .    .++.+.+        ..+|+||.|+.
T Consensus         7 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~--------~~~D~vi~~v~   70 (299)
T 1vpd_A            7 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAET---A----STAKAIA--------EQCDVIITMLP   70 (299)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---C----SSHHHHH--------HHCSEEEECCS
T ss_pred             eEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCee---c----CCHHHHH--------hCCCEEEEECC
Confidence            78999999999999988888898 5888889998888777766431   1    1222222        24799999998


Q ss_pred             cHHHHHHHH-------HHhccCCEEEEEc
Q 017426          272 LNKTMSTAL-------GATCAGGKVCLVG  293 (372)
Q Consensus       272 ~~~~~~~~~-------~~l~~~G~~v~~g  293 (372)
                      .+......+       ..++++..++.++
T Consensus        71 ~~~~~~~~~~~~~~l~~~l~~~~~vv~~s   99 (299)
T 1vpd_A           71 NSPHVKEVALGENGIIEGAKPGTVLIDMS   99 (299)
T ss_dssp             SHHHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred             CHHHHHHHHhCcchHhhcCCCCCEEEECC
Confidence            654445444       4566666666554

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=95.86  E-value=0.037  Score=47.94  Aligned_cols=82  Identities=17%  Similarity=0.110  Sum_probs=51.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCC-CeEEEEecChhHHHHH-HHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVA-KEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~-~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      |.++||+|+ +++|.++++.+...|+ ..|+.+.+++++.+.+ ++++... .+..|-.+ .+..+.+.+..+. .+++|
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~id   80 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKG-HGKID   80 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHh-cCCcc
Confidence            568899987 9999998877766652 2677778888776544 4455322 22223222 2333344443332 35899


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      +++++.|.
T Consensus        81 ~lvnnAg~   88 (254)
T 3kzv_A           81 SLVANAGV   88 (254)
T ss_dssp             EEEEECCC
T ss_pred             EEEECCcc
Confidence            99998774

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=95.85  E-value=0.063  Score=45.55  Aligned_cols=77  Identities=17%  Similarity=0.170  Sum_probs=50.1

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-HhCCC-eEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~lg~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      ++||+|+ |++|.++++.+...|++ |+++++++++.+.+. .++.. ..+..|-.+   .+.++++.+.....+|++++
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~~~~~~d~lv~   78 (230)
T 3guy_A            3 LIVITGASSGLGAELAKLYDAEGKA-TYLTGRSESKLSTVTNCLSNNVGYRARDLAS---HQEVEQLFEQLDSIPSTVVH   78 (230)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCHHHHHHHHHTCSSCCCEEECCTTC---HHHHHHHHHSCSSCCSEEEE
T ss_pred             EEEEecCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhhccCeEeecCCC---HHHHHHHHHHHhhcCCEEEE
Confidence            6899987 99999999999999995 777888887766543 44322 122222222   22344444323345699999


Q ss_pred             CCCc
Q 017426          269 CAGL  272 (372)
Q Consensus       269 ~~g~  272 (372)
                      +.|.
T Consensus        79 ~Ag~   82 (230)
T 3guy_A           79 SAGS   82 (230)
T ss_dssp             CCCC
T ss_pred             eCCc
Confidence            8873

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=95.84  E-value=0.045  Score=43.84  Aligned_cols=101  Identities=14%  Similarity=0.173  Sum_probs=62.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcce
Q 017426          186 NIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       186 ~~~~g~~vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d  264 (372)
                      .++++++||-.|+|. |..+..+++..|. ..+++++.++ ..+.    .-..++..+....+..+.+....  ..+.+|
T Consensus        19 ~~~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----~~~~~~~~d~~~~~~~~~~~~~~--~~~~~D   90 (180)
T 1ej0_A           19 LFKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI----VGVDFLQGDFRDELVMKALLERV--GDSKVQ   90 (180)
T ss_dssp             CCCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC----TTEEEEESCTTSHHHHHHHHHHH--TTCCEE
T ss_pred             CCCCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc----CcEEEEEcccccchhhhhhhccC--CCCcee
Confidence            378899999999876 7888888888642 4789998877 3321    21122222222222112222211  246899


Q ss_pred             EEEeC-----CCc------------HHHHHHHHHHhccCCEEEEEcC
Q 017426          265 VSFDC-----AGL------------NKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       265 ~vid~-----~g~------------~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      +|+..     .+.            ...+..+.+.|+++|.++....
T Consensus        91 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  137 (180)
T 1ej0_A           91 VVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF  137 (180)
T ss_dssp             EEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            99972     232            2467778899999999887644

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=95.80  E-value=0.043  Score=46.79  Aligned_cols=103  Identities=18%  Similarity=0.224  Sum_probs=66.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHHHcC-
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMG-  260 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~~~~-  260 (372)
                      ..++.+||-+|+| .|..++.+++..+ ...+++++.+++..+.+++    .|....+.+.  ..+..+.+..+.. .. 
T Consensus        70 ~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~--~~d~~~~l~~l~~-~~~  145 (232)
T 3cbg_A           70 LTGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLR--LGPALATLEQLTQ-GKP  145 (232)
T ss_dssp             HHTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEE--ESCHHHHHHHHHT-SSS
T ss_pred             hcCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EcCHHHHHHHHHh-cCC
Confidence            3466799999987 6888889998764 2379999999988777654    3543211111  1333333433321 11 


Q ss_pred             -CcceEEEeCCCc---HHHHHHHHHHhccCCEEEEEc
Q 017426          261 -TGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       261 -~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  293 (372)
                       +.||+||-....   ...+..+.+.|+++|.++.-.
T Consensus       146 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~  182 (232)
T 3cbg_A          146 LPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDN  182 (232)
T ss_dssp             CCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred             CCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence             679999843322   245778889999999988753

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=95.80  E-value=0.08  Score=48.25  Aligned_cols=131  Identities=15%  Similarity=0.073  Sum_probs=80.4

Q ss_pred             CEEEEECCCHHHH-HHHHHHHHc-CCCeEEEEecChhHHH-HHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          191 TNVLIMGAGPIGL-VTMLAARAF-GAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       191 ~~vlI~Gag~~G~-~ai~l~~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      -+|.|+|+|.+|. ..+..++.. +++.+.+.++++++.+ +++++|+...       .++    .++.+  ...+|+|+
T Consensus        28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~-------~~~----~~ll~--~~~~D~V~   94 (350)
T 3rc1_A           28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPV-------EGY----PALLE--RDDVDAVY   94 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEE-------ESH----HHHHT--CTTCSEEE
T ss_pred             eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCc-------CCH----HHHhc--CCCCCEEE
Confidence            3789999999998 566666655 7755556678877655 5567887543       222    23332  35799999


Q ss_pred             eCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchh----hhccCcEE-Eee-ccCCCcHHHHHHHHHcCCC
Q 017426          268 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDV-VGV-FRYKNTWPLCLELLRSGKI  335 (372)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i-~~~-~~~~~~~~~~~~ll~~g~~  335 (372)
                      .|+....+.+.+..+|.. |+.+.+.-......-....    .-.+++.+ .+. ..+...++.+.+++++|.+
T Consensus        95 i~tp~~~h~~~~~~al~a-Gk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~i  167 (350)
T 3rc1_A           95 VPLPAVLHAEWIDRALRA-GKHVLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLDEGVI  167 (350)
T ss_dssp             ECCCGGGHHHHHHHHHHT-TCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHHTTTT
T ss_pred             ECCCcHHHHHHHHHHHHC-CCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHhcCCC
Confidence            999987777788888874 5556664221111111111    11223322 222 2336778889999999887

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=95.80  E-value=0.05  Score=47.84  Aligned_cols=98  Identities=16%  Similarity=0.106  Sum_probs=64.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh------CC--CeEEecCCCcccHHHHHHHHHHHc
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI------GA--DNIVKVSTNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l------g~--~~v~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      ..+.+||++|+|. |..+..+++..+...+++++.+++-.+.+++.      +.  +.+....   .|..+.+..    .
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~---~D~~~~l~~----~  145 (275)
T 1iy9_A           74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV---DDGFMHIAK----S  145 (275)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE---SCSHHHHHT----C
T ss_pred             CCCCEEEEECCch-HHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEE---CcHHHHHhh----C
Confidence            3568999998753 66667777776767899999999988887753      11  1121111   222222221    2


Q ss_pred             CCcceEEEeCCCc----------HHHHHHHHHHhccCCEEEEEc
Q 017426          260 GTGIDVSFDCAGL----------NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       260 ~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ...+|+|+-....          .+.+..+.+.|+++|.++...
T Consensus       146 ~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~  189 (275)
T 1iy9_A          146 ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT  189 (275)
T ss_dssp             CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            4679999853321          357889999999999998764

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=95.79  E-value=0.016  Score=48.86  Aligned_cols=93  Identities=15%  Similarity=0.176  Sum_probs=58.2

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCC
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  270 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  270 (372)
                      +|||+|+ |.+|..+++.+...|. .|+++++++++.+.+  .++ .++..|-.  +..+.+.+.    -.++|+||.+.
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--~~~-~~~~~D~~--d~~~~~~~~----~~~~d~vi~~a   71 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY--NNV-KAVHFDVD--WTPEEMAKQ----LHGMDAIINVS   71 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC--TTE-EEEECCTT--SCHHHHHTT----TTTCSEEEECC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc--CCc-eEEEeccc--CCHHHHHHH----HcCCCEEEECC
Confidence            6899997 9999999999999998 578888887654322  122 22332221  212234333    24799999998


Q ss_pred             CcHH---------HHHHHHHHhccC--CEEEEEcC
Q 017426          271 GLNK---------TMSTALGATCAG--GKVCLVGM  294 (372)
Q Consensus       271 g~~~---------~~~~~~~~l~~~--G~~v~~g~  294 (372)
                      |...         ....+++.++..  ++++.++.
T Consensus        72 g~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS  106 (219)
T 3dqp_A           72 GSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST  106 (219)
T ss_dssp             CCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             cCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence            8531         233444444433  58888764

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=95.77  E-value=0.062  Score=45.28  Aligned_cols=104  Identities=17%  Similarity=0.177  Sum_probs=66.9

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHH----hCCCe-EEecCCCcccHHHHHHHHHHHc
Q 017426          186 NIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGADN-IVKVSTNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       186 ~~~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~-v~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      ...++.+||-+|+| .|..++.+++... ...+++++.+++..+.+++    .|... +...   ..+..+.+..+....
T Consensus        55 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~---~~d~~~~~~~~~~~~  130 (223)
T 3duw_A           55 QIQGARNILEIGTL-GGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVR---TGLALDSLQQIENEK  130 (223)
T ss_dssp             HHHTCSEEEEECCT-TSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE---ESCHHHHHHHHHHTT
T ss_pred             HhhCCCEEEEecCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE---EcCHHHHHHHHHhcC
Confidence            34567899999876 4788888888863 2379999999988776654    35432 2111   133334343333211


Q ss_pred             CCcceEEEeCCCc---HHHHHHHHHHhccCCEEEEEc
Q 017426          260 GTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       260 ~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ...||+||-....   ...+..+.+.|+++|.++.-.
T Consensus       131 ~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  167 (223)
T 3duw_A          131 YEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDN  167 (223)
T ss_dssp             CCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEES
T ss_pred             CCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            2579999843322   346778889999999887653

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=95.76  E-value=0.068  Score=46.24  Aligned_cols=100  Identities=20%  Similarity=0.233  Sum_probs=65.8

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh----CCCeEEecCCCcccHHHHHHHHHHH
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      +....+++.+||-+|+| .|..+..+++.. . .+++++.+++..+.+++.    +...+........++.     +   
T Consensus        31 ~~l~~~~~~~vLDiGcG-~G~~~~~l~~~~-~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~-----~---   99 (260)
T 1vl5_A           31 QIAALKGNEEVLDVATG-GGHVANAFAPFV-K-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-----F---   99 (260)
T ss_dssp             HHHTCCSCCEEEEETCT-TCHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-----S---
T ss_pred             HHhCCCCCCEEEEEeCC-CCHHHHHHHHhC-C-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCC-----C---
Confidence            44566789999999986 477777777664 3 799999999887776553    3322211111111110     0   


Q ss_pred             cCCcceEEEeCCCc------HHHHHHHHHHhccCCEEEEEc
Q 017426          259 MGTGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       259 ~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ..+.||+|+....-      ...+..+.+.|+|+|.++...
T Consensus       100 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~  140 (260)
T 1vl5_A          100 TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  140 (260)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            13679999975332      357788999999999998864

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=95.76  E-value=0.043  Score=47.93  Aligned_cols=82  Identities=18%  Similarity=0.364  Sum_probs=50.5

Q ss_pred             CCCEEEEEC---CCHHHHHHHHHHHHcCCCeEEEEecChhH--HHHHHHhCCC-eEEecCCCc-ccHHHHHHHHHHHcC-
Q 017426          189 PETNVLIMG---AGPIGLVTMLAARAFGAPRIVIVDVDDYR--LSVAKEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMG-  260 (372)
Q Consensus       189 ~g~~vlI~G---ag~~G~~ai~l~~~~g~~~vv~v~~~~~~--~~~~~~lg~~-~v~~~~~~~-~~~~~~~~~~~~~~~-  260 (372)
                      .+.++||+|   ++++|.++++.+...|+ .|+++++++++  .+..++++.. ..+..|-.+ ++..+.+.+..+..+ 
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   84 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            467899997   48999999999999999 57777777654  2333444422 222233222 233334444333222 


Q ss_pred             -CcceEEEeCCC
Q 017426          261 -TGIDVSFDCAG  271 (372)
Q Consensus       261 -~~~d~vid~~g  271 (372)
                       +++|++|++.|
T Consensus        85 ~~~iD~lv~nAg   96 (269)
T 2h7i_A           85 GNKLDGVVHSIG   96 (269)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCceEEEECCc
Confidence             28999999876

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.75  E-value=0.1  Score=46.84  Aligned_cols=89  Identities=13%  Similarity=0.153  Sum_probs=60.3

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      ..+|.|+|+|.+|...++.+...|. .|++.++++++.+.+.+.|+...       .+..+    ..    ...|+||-+
T Consensus        31 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~-------~~~~e----~~----~~aDvVi~~   94 (320)
T 4dll_A           31 ARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAALGATIH-------EQARA----AA----RDADIVVSM   94 (320)
T ss_dssp             CSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCEEE-------SSHHH----HH----TTCSEEEEC
T ss_pred             CCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCCEee-------CCHHH----HH----hcCCEEEEE
Confidence            3589999999999999999999998 58889999999888777665321       12222    21    357888888


Q ss_pred             CCcHHHHHHHH------HHhccCCEEEEEcC
Q 017426          270 AGLNKTMSTAL------GATCAGGKVCLVGM  294 (372)
Q Consensus       270 ~g~~~~~~~~~------~~l~~~G~~v~~g~  294 (372)
                      +..+......+      ..+.++..++..+.
T Consensus        95 vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A           95 LENGAVVQDVLFAQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             CSSHHHHHHHHTTTCHHHHCCTTCEEEECSC
T ss_pred             CCCHHHHHHHHcchhHHhhCCCCCEEEecCC
Confidence            77654444333      24555555555543

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=95.75  E-value=0.036  Score=46.80  Aligned_cols=94  Identities=17%  Similarity=0.247  Sum_probs=58.6

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      .+|||+|+ |.+|..+++.+...|. .|+++++++++.+.+.  .-..++..|-.  + .+.+.+..    .++|+||.+
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~~Dl~--d-~~~~~~~~----~~~d~vi~~   74 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN--EHLKVKKADVS--S-LDEVCEVC----KGADAVISA   74 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC--TTEEEECCCTT--C-HHHHHHHH----TTCSEEEEC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc--CceEEEEecCC--C-HHHHHHHh----cCCCEEEEe
Confidence            58999998 9999999999999998 6888888876543211  11112222221  2 23344443    369999999


Q ss_pred             CCcH-----------HHHHHHHHHhccC--CEEEEEcC
Q 017426          270 AGLN-----------KTMSTALGATCAG--GKVCLVGM  294 (372)
Q Consensus       270 ~g~~-----------~~~~~~~~~l~~~--G~~v~~g~  294 (372)
                      .|..           .....+++.++..  .+++.++.
T Consensus        75 a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss  112 (227)
T 3dhn_A           75 FNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG  112 (227)
T ss_dssp             CCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred             CcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence            8763           1223455555444  47888764

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=95.75  E-value=0.1  Score=46.47  Aligned_cols=88  Identities=15%  Similarity=0.102  Sum_probs=59.3

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCC
Q 017426          191 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  270 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  270 (372)
                      .+|.|+|+|.+|...+..+...|. .|++.++++++.+.+.+.|.....  .+. .+       .    -...|+||-++
T Consensus         8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~--~~~-~e-------~----~~~aDvvi~~v   72 (303)
T 3g0o_A            8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACGAA--ASA-RE-------F----AGVVDALVILV   72 (303)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEE--SSS-TT-------T----TTTCSEEEECC
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCcccc--CCH-HH-------H----HhcCCEEEEEC
Confidence            479999999999999999999998 688899999999888888865411  111 11       0    13567788777


Q ss_pred             CcHHHHHHHH-------HHhccCCEEEEEc
Q 017426          271 GLNKTMSTAL-------GATCAGGKVCLVG  293 (372)
Q Consensus       271 g~~~~~~~~~-------~~l~~~G~~v~~g  293 (372)
                      ..+......+       ..++++..++..+
T Consensus        73 p~~~~~~~v~~~~~~l~~~l~~g~ivv~~s  102 (303)
T 3g0o_A           73 VNAAQVRQVLFGEDGVAHLMKPGSAVMVSS  102 (303)
T ss_dssp             SSHHHHHHHHC--CCCGGGSCTTCEEEECS
T ss_pred             CCHHHHHHHHhChhhHHhhCCCCCEEEecC
Confidence            7654444443       2344444554443

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=95.74  E-value=0.031  Score=53.22  Aligned_cols=92  Identities=17%  Similarity=0.197  Sum_probs=67.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      -.|.+|.|+|.|.+|..+++.++.+|+ .|++.+++..+.......|...        .+    +.++    -...|+|+
T Consensus       275 L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~~~~~~a~~~G~~~--------~~----l~el----l~~aDiVi  337 (494)
T 3d64_A          275 IAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDPICALQAAMEGYRV--------VT----MEYA----ADKADIFV  337 (494)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCHHHHHHHHTTTCEE--------CC----HHHH----TTTCSEEE
T ss_pred             cCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCChHhHHHHHHcCCEe--------CC----HHHH----HhcCCEEE
Confidence            478999999999999999999999999 6899988887754444456531        12    2223    25799999


Q ss_pred             eCCCcHHHH-HHHHHHhccCCEEEEEcCCC
Q 017426          268 DCAGLNKTM-STALGATCAGGKVCLVGMGH  296 (372)
Q Consensus       268 d~~g~~~~~-~~~~~~l~~~G~~v~~g~~~  296 (372)
                      .+++....+ ...+..|+++..++.++...
T Consensus       338 ~~~~t~~lI~~~~l~~MK~gAilINvgrg~  367 (494)
T 3d64_A          338 TATGNYHVINHDHMKAMRHNAIVCNIGHFD  367 (494)
T ss_dssp             ECSSSSCSBCHHHHHHCCTTEEEEECSSSS
T ss_pred             ECCCcccccCHHHHhhCCCCcEEEEcCCCc
Confidence            987654333 35778899988888887543

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=95.74  E-value=0.049  Score=45.37  Aligned_cols=98  Identities=16%  Similarity=0.262  Sum_probs=65.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC----CeEEecCCCcccHHHHHHHHHHHcCCc
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA----DNIVKVSTNLQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~----~~v~~~~~~~~~~~~~~~~~~~~~~~~  262 (372)
                      ++++.+||-.|+|. |..+..+++. |...+++++.++...+.+++...    ..++..+.....       +   ..+.
T Consensus        40 ~~~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~-------~---~~~~  107 (215)
T 2pxx_A           40 LRPEDRILVLGCGN-SALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLD-------F---PSAS  107 (215)
T ss_dssp             CCTTCCEEEETCTT-CSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCC-------S---CSSC
T ss_pred             cCCCCeEEEECCCC-cHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCC-------C---CCCc
Confidence            57889999999865 7777777766 55479999999999888876432    122222111101       0   1357


Q ss_pred             ceEEEeCCC---------------------cHHHHHHHHHHhccCCEEEEEcCCC
Q 017426          263 IDVSFDCAG---------------------LNKTMSTALGATCAGGKVCLVGMGH  296 (372)
Q Consensus       263 ~d~vid~~g---------------------~~~~~~~~~~~l~~~G~~v~~g~~~  296 (372)
                      +|+|+....                     ....+..+.+.|+++|+++......
T Consensus       108 fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~  162 (215)
T 2pxx_A          108 FDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA  162 (215)
T ss_dssp             EEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred             ccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence            999996311                     1245677888999999999876543

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=95.73  E-value=0.051  Score=51.51  Aligned_cols=82  Identities=21%  Similarity=0.331  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhH---HHHHHHhCCCeEEecCCCc-ccHHHHHHHHHHHcCCcc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR---LSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~---~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~  263 (372)
                      ++.++||+|+ |++|.++++.+...|+ +|+.+++++..   .+..++++... +..|-.+ .+..+.+.+..+..++++
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga-~Vvl~~r~~~~~~l~~~~~~~~~~~-~~~Dvtd~~~v~~~~~~~~~~~g~~i  289 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGA-TVVAIDVDGAAEDLKRVADKVGGTA-LTLDVTADDAVDKITAHVTEHHGGKV  289 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECGGGHHHHHHHHHHHTCEE-EECCTTSTTHHHHHHHHHHHHSTTCC
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeE-EEEecCCHHHHHHHHHHHHHHcCCCc
Confidence            5678999987 9999999998888899 57777665432   23344566543 3333322 334444444444333459


Q ss_pred             eEEEeCCCc
Q 017426          264 DVSFDCAGL  272 (372)
Q Consensus       264 d~vid~~g~  272 (372)
                      |++|++.|.
T Consensus       290 d~lV~nAGv  298 (454)
T 3u0b_A          290 DILVNNAGI  298 (454)
T ss_dssp             SEEEECCCC
T ss_pred             eEEEECCcc
Confidence            999998874

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=95.72  E-value=0.034  Score=47.15  Aligned_cols=100  Identities=17%  Similarity=0.150  Sum_probs=67.3

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC----CeEEecCCCcccHHHHHHHHH
Q 017426          181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA----DNIVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       181 ~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~----~~v~~~~~~~~~~~~~~~~~~  256 (372)
                      .++...++++++||-.|+|. |..+..+++..  ..+++++.+++..+.+++.-.    ..++..     +..+.+   .
T Consensus        62 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~-----d~~~~~---~  130 (231)
T 1vbf_A           62 MLDELDLHKGQKVLEIGTGI-GYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYNNIKLILG-----DGTLGY---E  130 (231)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCSSEEEEES-----CGGGCC---G
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcCCeEEEEC-----Cccccc---c
Confidence            44556788999999999875 77888888764  479999999998888876421    112211     111100   0


Q ss_pred             HHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEc
Q 017426          257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                        ..+.+|+|+....-......+.+.|+++|+++...
T Consensus       131 --~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~  165 (231)
T 1vbf_A          131 --EEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILPI  165 (231)
T ss_dssp             --GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             --cCCCccEEEECCcHHHHHHHHHHHcCCCcEEEEEE
Confidence              13579999876543333457888999999988764

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=95.71  E-value=0.041  Score=49.53  Aligned_cols=82  Identities=28%  Similarity=0.357  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecC----------hhHH-HH---HHHhCCCeE-EecCCCc-ccHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD----------DYRL-SV---AKEIGADNI-VKVSTNL-QDIAEE  251 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~----------~~~~-~~---~~~lg~~~v-~~~~~~~-~~~~~~  251 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|++++++          .++. +.   ++..+.... +..|-.+ .+..+.
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            5788999987 9999999999999999 57777665          3322 22   233343222 2222222 233333


Q ss_pred             HHHHHHHcCCcceEEEeCCCc
Q 017426          252 VEKIQKAMGTGIDVSFDCAGL  272 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~  272 (372)
                      +.++.+. .+++|++|++.|.
T Consensus       105 ~~~~~~~-~g~iD~lv~nAg~  124 (322)
T 3qlj_A          105 IQTAVET-FGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHH-HSCCCEEECCCCC
T ss_pred             HHHHHHH-cCCCCEEEECCCC
Confidence            4443332 3589999998874

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=95.70  E-value=0.09  Score=47.44  Aligned_cols=129  Identities=19%  Similarity=0.238  Sum_probs=79.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCeEEEEecChhHHH-HHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          192 NVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      +|.|+|+|.+|...+..++.. +++.+.+.++++++.+ +++.+|+.    +    .++.    ++.+  ...+|+|+.|
T Consensus         5 ~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~----~----~~~~----~~l~--~~~~D~V~i~   70 (331)
T 4hkt_A            5 RFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE----V----RTID----AIEA--AADIDAVVIC   70 (331)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE----E----CCHH----HHHH--CTTCCEEEEC
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC----c----CCHH----HHhc--CCCCCEEEEe
Confidence            688999999999888777765 6754556788887755 45667764    2    2332    2322  3479999999


Q ss_pred             CCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchh----hhccCcEEE-ee-ccCCCcHHHHHHHHHcCCC
Q 017426          270 AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDVV-GV-FRYKNTWPLCLELLRSGKI  335 (372)
Q Consensus       270 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i~-~~-~~~~~~~~~~~~ll~~g~~  335 (372)
                      +....+.+.+..++.. |+.+.+.-......-....    .-.+++.+. +. ..+...+..+.+++++|.+
T Consensus        71 tp~~~h~~~~~~al~~-gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~i  141 (331)
T 4hkt_A           71 TPTDTHADLIERFARA-GKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAIDDGRI  141 (331)
T ss_dssp             SCGGGHHHHHHHHHHT-TCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHTTTT
T ss_pred             CCchhHHHHHHHHHHc-CCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHHHcCCC
Confidence            9987777778888775 4556664221111111111    122233222 22 2236678888999999887

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=95.70  E-value=0.029  Score=49.29  Aligned_cols=80  Identities=18%  Similarity=0.208  Sum_probs=49.5

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCC---CeEEecCCCcc-cHHHHHHHHHHHcCCcce
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGA---DNIVKVSTNLQ-DIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~---~~v~~~~~~~~-~~~~~~~~~~~~~~~~~d  264 (372)
                      .++||+|+ |++|.++++.+...|+ .|+++++++++.+.+ +++..   ...+..|-.+. +..+.+.+..+ ..+++|
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g~iD   99 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPE-EFATLR   99 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCG-GGSSCC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHH-HhCCCC
Confidence            67899987 9999999999999999 577788887765543 34432   12222232222 22222222111 125789


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      ++|++.|.
T Consensus       100 ~lvnnAG~  107 (272)
T 2nwq_A          100 GLINNAGL  107 (272)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998763

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=95.70  E-value=0.051  Score=50.56  Aligned_cols=87  Identities=23%  Similarity=0.225  Sum_probs=53.8

Q ss_pred             cCC-CCCCEEEEECC-CHHHHHHHHHHHH-cCCCeEEEEecChhH----------------HHHHHHhCCCeE-EecCCC
Q 017426          185 ANI-GPETNVLIMGA-GPIGLVTMLAARA-FGAPRIVIVDVDDYR----------------LSVAKEIGADNI-VKVSTN  244 (372)
Q Consensus       185 ~~~-~~g~~vlI~Ga-g~~G~~ai~l~~~-~g~~~vv~v~~~~~~----------------~~~~~~lg~~~v-~~~~~~  244 (372)
                      ..+ +.+.++||+|+ +++|.++++.+.. .|+ .|++++++.+.                .+.+++.|.... +..|-.
T Consensus        55 ~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA-~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvt  133 (422)
T 3s8m_A           55 GVRNDGPKKVLVIGASSGYGLASRITAAFGFGA-DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAF  133 (422)
T ss_dssp             CCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCC
Confidence            455 35677899987 9999998888877 999 56666554321                134556664432 333333


Q ss_pred             ccc-HHHHHHHHHHHcCCcceEEEeCCCc
Q 017426          245 LQD-IAEEVEKIQKAMGTGIDVSFDCAGL  272 (372)
Q Consensus       245 ~~~-~~~~~~~~~~~~~~~~d~vid~~g~  272 (372)
                      +++ ..+.+.+..+..++++|+++++.|.
T Consensus       134 d~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          134 SDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             SHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            333 3334444433322789999998875

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=95.70  E-value=0.11  Score=48.22  Aligned_cols=106  Identities=13%  Similarity=0.109  Sum_probs=67.3

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH-----------hCC--CeEEecCCCccc
Q 017426          181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-----------IGA--DNIVKVSTNLQD  247 (372)
Q Consensus       181 ~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~-----------lg~--~~v~~~~~~~~~  247 (372)
                      .++..+++++++||=+|+| .|..++++++..|...+++++.+++-.+++++           +|.  ..+.....+-.+
T Consensus       165 il~~l~l~~gd~VLDLGCG-tG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~  243 (438)
T 3uwp_A          165 MIDEIKMTDDDLFVDLGSG-VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS  243 (438)
T ss_dssp             HHHHHCCCTTCEEEEESCT-TSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTS
T ss_pred             HHHhcCCCCCCEEEEeCCC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccC
Confidence            4466789999998888876 48888899988898779999999865554432           343  333222121112


Q ss_pred             HHHHHHHHHHHcCCcceEEEeC-C-CcH---HHHHHHHHHhccCCEEEEEc
Q 017426          248 IAEEVEKIQKAMGTGIDVSFDC-A-GLN---KTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       248 ~~~~~~~~~~~~~~~~d~vid~-~-g~~---~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ..  +....    ..+|+||-. . -.+   ..+...++.|+|||+++...
T Consensus       244 lp--~~d~~----~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE  288 (438)
T 3uwp_A          244 EE--WRERI----ANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  288 (438)
T ss_dssp             HH--HHHHH----HTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESS
T ss_pred             Cc--ccccc----CCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEee
Confidence            11  11111    368999842 1 112   24555677899999999875

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=95.69  E-value=0.054  Score=47.28  Aligned_cols=82  Identities=16%  Similarity=0.195  Sum_probs=49.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe-cChhHHHH-HHH---hCC-CeEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD-VDDYRLSV-AKE---IGA-DNIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~-~~~~~~~~-~~~---lg~-~~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .+.++||+|+ +++|.++++.+...|++ |++++ ++.++.+. ++.   .+. ...+..|-.+ .+..+.+.++.+. .
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~  101 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDAGMA-VAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLAD-F  101 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTTTCE-EEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             cCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH-c
Confidence            5678899987 99999999999999995 66665 55444332 222   232 2223333222 2333334333332 2


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|++|++.|.
T Consensus       102 g~id~li~nAg~  113 (269)
T 3gk3_A          102 GKVDVLINNAGI  113 (269)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            579999998873

>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}

Probab=95.68  E-value=0.13  Score=47.89  Aligned_cols=132  Identities=19%  Similarity=0.150  Sum_probs=82.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc---------CCCeEEEEecChhHHH-HHHHhCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017426          191 TNVLIMGAGPIGLVTMLAARAF---------GAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG  260 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~---------g~~~vv~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~  260 (372)
                      =+|-|+|+|.+|...+...+..         +++.+.++++++++.+ +++++|...+.      .++.+    +.+  .
T Consensus        27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y------~d~~~----ll~--~   94 (412)
T 4gqa_A           27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAY------GDWRE----LVN--D   94 (412)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEE------SSHHH----HHH--C
T ss_pred             ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEE------CCHHH----Hhc--C
Confidence            3788999999998766665543         3445556678877755 56789987653      23333    332  3


Q ss_pred             CcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchh----hhccCcE-EEee-ccCCCcHHHHHHHHHcCC
Q 017426          261 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVD-VVGV-FRYKNTWPLCLELLRSGK  334 (372)
Q Consensus       261 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~-i~~~-~~~~~~~~~~~~ll~~g~  334 (372)
                      ..+|+|+-|+....+.+.+..+|. .|+.+.+.-......-....    .-.+++. ..+. ..+...+..+.+++++|.
T Consensus        95 ~~vD~V~I~tp~~~H~~~~~~al~-aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~  173 (412)
T 4gqa_A           95 PQVDVVDITSPNHLHYTMAMAAIA-AGKHVYCEKPLAVNEQQAQEMAQAARRAGVKTMVAFNNIKTPAALLAKQIIARGD  173 (412)
T ss_dssp             TTCCEEEECSCGGGHHHHHHHHHH-TTCEEEEESCSCSSHHHHHHHHHHHHHHTCCEEEECGGGTSHHHHHHHHHHHHTT
T ss_pred             CCCCEEEECCCcHHHHHHHHHHHH-cCCCeEeecCCcCCHHHHHHHHHHHHHhCCeeeeccceecCHHHHHHHHHHhcCC
Confidence            579999999998878888888887 46667775321111111111    1112222 2222 234667888889999988


Q ss_pred             C
Q 017426          335 I  335 (372)
Q Consensus       335 ~  335 (372)
                      +
T Consensus       174 i  174 (412)
T 4gqa_A          174 I  174 (412)
T ss_dssp             T
T ss_pred             c
Confidence            7

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=95.68  E-value=0.059  Score=47.69  Aligned_cols=36  Identities=28%  Similarity=0.424  Sum_probs=31.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      ...+|+|.|+|++|..+++.+.+.|...+..++.+.
T Consensus        35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            357999999999999999999999998888887654

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=95.67  E-value=0.018  Score=49.69  Aligned_cols=78  Identities=18%  Similarity=0.237  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh--hHHHHHHHhCCCeE-EecCCCcccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD--YRLSVAKEIGADNI-VKVSTNLQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~--~~~~~~~~lg~~~v-~~~~~~~~~~~~~~~~~~~~~~~~~d  264 (372)
                      .|+.+||+|+ +++|.++++.+...|+ .|+++++++  +..+.+++.|.... +..|-.+++.   ++++.+  .+++|
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~---v~~~~~--~g~iD   81 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKDGGNASALLIDFADPLA---AKDSFT--DAGFD   81 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTT---TTTSST--TTCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHH---HHHHHH--hCCCC
Confidence            4788999987 9999999999999999 567776664  44556667775432 2222222221   222221  36799


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      +++++.|.
T Consensus        82 iLVNNAGi   89 (247)
T 4hp8_A           82 ILVNNAGI   89 (247)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998875

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=95.65  E-value=0.039  Score=48.46  Aligned_cols=102  Identities=19%  Similarity=0.213  Sum_probs=67.9

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEecChhHHHHHHHh-----CCCeEEecCCCcccHHHHHHHH
Q 017426          182 CRRANIGPETNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEI-----GADNIVKVSTNLQDIAEEVEKI  255 (372)
Q Consensus       182 l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~~~~~l-----g~~~v~~~~~~~~~~~~~~~~~  255 (372)
                      +....++++++||-.|+| .|..+..+++.. ....+++++.+++..+.+++.     |.+.+.....   |+.+.   +
T Consensus       103 ~~~~~~~~~~~VLD~G~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~---d~~~~---~  175 (275)
T 1yb2_A          103 IMRCGLRPGMDILEVGVG-SGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS---DIADF---I  175 (275)
T ss_dssp             ---CCCCTTCEEEEECCT-TSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS---CTTTC---C
T ss_pred             HHHcCCCCcCEEEEecCC-CCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEEC---chhcc---C
Confidence            355678899999999886 477778888873 233799999999988877653     5333222111   11110   0


Q ss_pred             HHHcCCcceEEEeCCCcH-HHHHHHHHHhccCCEEEEEc
Q 017426          256 QKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       256 ~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g  293 (372)
                         ....+|+|+.....+ ..+..+.+.|+++|.++...
T Consensus       176 ---~~~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~  211 (275)
T 1yb2_A          176 ---SDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYL  211 (275)
T ss_dssp             ---CSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             ---cCCCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence               135799999755543 46778899999999988764

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.63  E-value=0.072  Score=47.78  Aligned_cols=91  Identities=19%  Similarity=0.142  Sum_probs=61.0

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCC-eEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          191 TNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~g~~-~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      .+|.|+|+|.+|.+.++.++..|.. .|++.++++++.+.+.++|...... .+. .++      .    -...|+||-|
T Consensus        34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~-~~~-~~~------~----~~~aDvVila  101 (314)
T 3ggo_A           34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT-TSI-AKV------E----DFSPDFVMLS  101 (314)
T ss_dssp             SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE-SCT-TGG------G----GGCCSEEEEC
T ss_pred             CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhc-CCH-HHH------h----hccCCEEEEe
Confidence            5899999999999999999999973 5888999999999888888632111 111 110      0    1467888888


Q ss_pred             CCcHH---HHHHHHHHhccCCEEEEEc
Q 017426          270 AGLNK---TMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       270 ~g~~~---~~~~~~~~l~~~G~~v~~g  293 (372)
                      +....   .+......++++..++.++
T Consensus       102 vp~~~~~~vl~~l~~~l~~~~iv~d~~  128 (314)
T 3ggo_A          102 SPVRTFREIAKKLSYILSEDATVTDQG  128 (314)
T ss_dssp             SCGGGHHHHHHHHHHHSCTTCEEEECC
T ss_pred             CCHHHHHHHHHHHhhccCCCcEEEECC
Confidence            77542   2333444556666555554

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=95.61  E-value=0.14  Score=45.09  Aligned_cols=99  Identities=17%  Similarity=0.166  Sum_probs=64.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC--------CeEEecCCCcccHHHHHHHHHHH
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA--------DNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~--------~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      ..++.+||++|+|. |..+..+++..+...+++++.+++..+.+++.-.        ..+...   ..|..+.+..    
T Consensus        76 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~---~~D~~~~l~~----  147 (283)
T 2i7c_A           76 SKEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVF---IEDASKFLEN----  147 (283)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEE---ESCHHHHHHH----
T ss_pred             CCCCCeEEEEeCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEE---ECChHHHHHh----
Confidence            45678999998653 5666677776655689999999999888876321        111111   1233332222    


Q ss_pred             cCCcceEEEeCCC----c------HHHHHHHHHHhccCCEEEEEc
Q 017426          259 MGTGIDVSFDCAG----L------NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       259 ~~~~~d~vid~~g----~------~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ..+.+|+|+-...    .      ...++.+.+.|+++|.++...
T Consensus       148 ~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~  192 (283)
T 2i7c_A          148 VTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC  192 (283)
T ss_dssp             CCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence            2468999985221    1      356778899999999998764

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=95.61  E-value=0.19  Score=45.43  Aligned_cols=75  Identities=21%  Similarity=0.263  Sum_probs=47.4

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh----hHHHHHHHh------CCCeEEecCCCcccHHHHHHHHHHH
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD----YRLSVAKEI------GADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~----~~~~~~~~l------g~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      +.+|||+|+ |.+|..+++.+...|. .|++++++.    +..+.+...      .-..++..+-.  + .+.+.+..  
T Consensus        25 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--d-~~~~~~~~--   98 (351)
T 3ruf_A           25 PKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIR--D-LTTCEQVM--   98 (351)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTT--C-HHHHHHHT--
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCC--C-HHHHHHHh--
Confidence            579999998 9999999999999998 567776643    233333332      22223333322  2 22344432  


Q ss_pred             cCCcceEEEeCCCc
Q 017426          259 MGTGIDVSFDCAGL  272 (372)
Q Consensus       259 ~~~~~d~vid~~g~  272 (372)
                        .++|+||.+.+.
T Consensus        99 --~~~d~Vih~A~~  110 (351)
T 3ruf_A           99 --KGVDHVLHQAAL  110 (351)
T ss_dssp             --TTCSEEEECCCC
T ss_pred             --cCCCEEEECCcc
Confidence              489999999874

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=95.60  E-value=0.022  Score=48.90  Aligned_cols=78  Identities=26%  Similarity=0.389  Sum_probs=47.9

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCc-ccHHHHHHHHHHHcC-Ccce
Q 017426          188 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMG-TGID  264 (372)
Q Consensus       188 ~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~-~~~d  264 (372)
                      ..+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+     +....+..|-.+ ++..+.+.+..+..+ +++|
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD   78 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   78 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhhcc-----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            35678999998 9999999999999998 5777777765432     111111122211 223333333332222 5899


Q ss_pred             EEEeCCC
Q 017426          265 VSFDCAG  271 (372)
Q Consensus       265 ~vid~~g  271 (372)
                      ++|++.|
T Consensus        79 ~lv~~Ag   85 (241)
T 1dhr_A           79 AILCVAG   85 (241)
T ss_dssp             EEEECCC
T ss_pred             EEEEccc
Confidence            9999887

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=95.60  E-value=0.092  Score=47.09  Aligned_cols=98  Identities=17%  Similarity=0.170  Sum_probs=63.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC--------CeEEecCCCcccHHHHHHHHHHHc
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA--------DNIVKVSTNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~--------~~v~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      .++.+||++|+|. |..+..+++..+...+++++.+++-.+.+++.-.        ..+...   ..|..+.+..    .
T Consensus       107 ~~~~~VLdIG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~---~~D~~~~l~~----~  178 (314)
T 2b2c_A          107 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLF---CGDGFEFLKN----H  178 (314)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEE---CSCHHHHHHH----C
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEE---EChHHHHHHh----c
Confidence            3567999998753 6677777776655589999999999888876421        111111   1333333322    2


Q ss_pred             CCcceEEEeCCCc----------HHHHHHHHHHhccCCEEEEEc
Q 017426          260 GTGIDVSFDCAGL----------NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       260 ~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      .+.||+||-....          ...++.+.+.|+++|.++...
T Consensus       179 ~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~  222 (314)
T 2b2c_A          179 KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  222 (314)
T ss_dssp             TTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             CCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence            4679999843311          245678889999999998764

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=95.59  E-value=0.017  Score=50.36  Aligned_cols=78  Identities=21%  Similarity=0.086  Sum_probs=48.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCc-ccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .+.++||+|+ |++|.++++.+...|+ .|++++++.++.+.   ..+ ..+..|-.+ ++..+.+.+..+. .+++|++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~---~~~-~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD~l  100 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSAD---PDI-HTVAGDISKPETADRIVREGIER-FGRIDSL  100 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSS---TTE-EEEESCTTSHHHHHHHHHHHHHH-HSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccc---Cce-EEEEccCCCHHHHHHHHHHHHHH-CCCCCEE
Confidence            4678999987 9999999999999999 57777776543221   111 122223222 2333334433332 3589999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      |++.|.
T Consensus       101 v~nAg~  106 (260)
T 3un1_A          101 VNNAGV  106 (260)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            998873

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=95.59  E-value=0.098  Score=47.70  Aligned_cols=131  Identities=15%  Similarity=0.091  Sum_probs=80.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc--CCCeEEEEecChhHHH-HHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          191 TNVLIMGAGPIGLVTMLAARAF--GAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~--g~~~vv~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      -+|.|+|+|.+|...+..++..  +++.+.+.++++++.+ +++++|+ ..  +    .++.+.+.      ...+|+|+
T Consensus        14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~--~----~~~~~ll~------~~~~D~V~   80 (354)
T 3q2i_A           14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RG--H----ASLTDMLA------QTDADIVI   80 (354)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EE--E----SCHHHHHH------HCCCSEEE
T ss_pred             ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-ce--e----CCHHHHhc------CCCCCEEE
Confidence            3788999999998877777765  6755556788887755 4567886 22  2    23333322      25799999


Q ss_pred             eCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchh----hhccCcEE-Eeec-cCCCcHHHHHHHHHcCCC
Q 017426          268 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDV-VGVF-RYKNTWPLCLELLRSGKI  335 (372)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i-~~~~-~~~~~~~~~~~ll~~g~~  335 (372)
                      .|+....+.+.+..++.. |+.+.+.-......-....    .-.++..+ .+.. .+...+..+.+++++|.+
T Consensus        81 i~tp~~~h~~~~~~al~~-gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  153 (354)
T 3q2i_A           81 LTTPSGLHPTQSIECSEA-GFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEKRF  153 (354)
T ss_dssp             ECSCGGGHHHHHHHHHHT-TCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTTTT
T ss_pred             ECCCcHHHHHHHHHHHHC-CCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHHHHHHHHHhcCCC
Confidence            999987777777778775 5556664221110111111    11223322 2222 235678888999999887

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=95.58  E-value=0.14  Score=45.26  Aligned_cols=96  Identities=16%  Similarity=0.156  Sum_probs=66.0

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCC---eEEecCCCcccHHHHHHHHHHH
Q 017426          186 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD---NIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       186 ~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      .++++.+||-+|+| .|..+..+++..|. .+++++.++...+.+++    .|..   .++..+.....+          
T Consensus        79 ~~~~~~~vLDiGcG-~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----------  146 (297)
T 2o57_A           79 VLQRQAKGLDLGAG-YGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC----------  146 (297)
T ss_dssp             CCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS----------
T ss_pred             CCCCCCEEEEeCCC-CCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCC----------
Confidence            78899999999986 47788888888787 79999999987776654    3432   222211111110          


Q ss_pred             cCCcceEEEeCCCc------HHHHHHHHHHhccCCEEEEEc
Q 017426          259 MGTGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       259 ~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ..+.+|+|+....-      ...+..+.+.|+|+|.++...
T Consensus       147 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~  187 (297)
T 2o57_A          147 EDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITD  187 (297)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            13579999864321      346788999999999998775

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=95.58  E-value=0.058  Score=51.25  Aligned_cols=95  Identities=14%  Similarity=0.119  Sum_probs=59.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEecChhHHHHHHH-hCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .+.+|+|+|+|.+|.+++..+... |. .|++++++.++.+.+.+ .+.. .+..+-.  +.. .+.+..    .++|+|
T Consensus        22 ~~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~-~~~~D~~--d~~-~l~~~l----~~~DvV   92 (467)
T 2axq_A           22 MGKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSK-AISLDVT--DDS-ALDKVL----ADNDVV   92 (467)
T ss_dssp             -CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCE-EEECCTT--CHH-HHHHHH----HTSSEE
T ss_pred             CCCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCc-EEEEecC--CHH-HHHHHH----cCCCEE
Confidence            356899999999999999888877 66 68888888887665543 3432 2222221  221 233332    369999


Q ss_pred             EeCCCcHHHHHHHHHHhccCCEEEEE
Q 017426          267 FDCAGLNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       267 id~~g~~~~~~~~~~~l~~~G~~v~~  292 (372)
                      |++++..........++..+-.++..
T Consensus        93 In~tp~~~~~~v~~a~l~~g~~vvd~  118 (467)
T 2axq_A           93 ISLIPYTFHPNVVKSAIRTKTDVVTS  118 (467)
T ss_dssp             EECSCGGGHHHHHHHHHHHTCEEEEC
T ss_pred             EECCchhhhHHHHHHHHhcCCEEEEe
Confidence            99998643323344456666666554

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=95.57  E-value=0.12  Score=47.48  Aligned_cols=132  Identities=16%  Similarity=0.101  Sum_probs=80.0

Q ss_pred             CEEEEECCCHHHHHHHHHHHH--------cCCCeEEEEecChhHHH-HHHHhCCCeEEecCCCcccHHHHHHHHHHHcCC
Q 017426          191 TNVLIMGAGPIGLVTMLAARA--------FGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~--------~g~~~vv~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~  261 (372)
                      =+|.|+|+|.+|..-+...+.        -+++.+.++++++++.+ +++++|...+.      .++.+    +.+  ..
T Consensus        26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y------~d~~e----ll~--~~   93 (393)
T 4fb5_A           26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKAT------ADWRA----LIA--DP   93 (393)
T ss_dssp             CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEE------SCHHH----HHH--CT
T ss_pred             ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeec------CCHHH----Hhc--CC
Confidence            489999999999765443332        25555666677776655 66789987553      23333    332  35


Q ss_pred             cceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchh----hhccCcEE-Eee-ccCCCcHHHHHHHHHcCCC
Q 017426          262 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDV-VGV-FRYKNTWPLCLELLRSGKI  335 (372)
Q Consensus       262 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i-~~~-~~~~~~~~~~~~ll~~g~~  335 (372)
                      .+|+|+-|+....+.+.+..+|. .|+.|.+.-.-....-....    .-.+++.+ .+. ..+...+..+.+++++|.+
T Consensus        94 ~iDaV~IatP~~~H~~~a~~al~-aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~vg~~~R~~p~~~~~k~~i~~G~i  172 (393)
T 4fb5_A           94 EVDVVSVTTPNQFHAEMAIAALE-AGKHVWCEKPMAPAYADAERMLATAERSGKVAALGYNYIQNPVMRHIRKLVGDGVI  172 (393)
T ss_dssp             TCCEEEECSCGGGHHHHHHHHHH-TTCEEEECSCSCSSHHHHHHHHHHHHHSSSCEEECCGGGGCHHHHHHHHHHHTTTT
T ss_pred             CCcEEEECCChHHHHHHHHHHHh-cCCeEEEccCCcccHHHHHHhhhhHHhcCCccccccccccChHHHHHHHHHHcCCC
Confidence            79999999998878888888887 57777775221111111111    11222222 222 2236678889999999887

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.57  E-value=0.018  Score=49.27  Aligned_cols=76  Identities=17%  Similarity=0.306  Sum_probs=46.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCc-ccHHHHHHHHHHHcC-CcceEE
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMG-TGIDVS  266 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~-~~~d~v  266 (372)
                      +.++||+|+ |.+|.++++.+...|+ .|+++++++++.+     +....+..|-.+ ++..+.+.+..+..+ +++|++
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCccccc-----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            568999997 9999999999999998 5777777765432     111112222211 222233333322222 589999


Q ss_pred             EeCCC
Q 017426          267 FDCAG  271 (372)
Q Consensus       267 id~~g  271 (372)
                      |++.|
T Consensus        77 v~~Ag   81 (236)
T 1ooe_A           77 FCVAG   81 (236)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99887

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=95.56  E-value=0.05  Score=48.66  Aligned_cols=49  Identities=14%  Similarity=0.144  Sum_probs=38.3

Q ss_pred             HHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecC---hhHHH
Q 017426          180 HACRRANI-GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD---DYRLS  228 (372)
Q Consensus       180 ~~l~~~~~-~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~---~~~~~  228 (372)
                      .+++...+ -.+.++||+|+|++|.+++..+...|++.|.++.++   .++.+
T Consensus       137 ~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~  189 (312)
T 3t4e_A          137 RAIKESGFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAV  189 (312)
T ss_dssp             HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHH
T ss_pred             HHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHH
Confidence            44554333 357899999999999999999999999888888888   55544

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=95.56  E-value=0.034  Score=52.69  Aligned_cols=93  Identities=20%  Similarity=0.200  Sum_probs=67.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      --.|.+|.|+|.|.+|..+++.++.+|+ .|++.+++..+...+...|...        .+    +.++    -...|+|
T Consensus       254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~~~~~~a~~~g~~~--------~~----l~el----l~~aDiV  316 (479)
T 1v8b_A          254 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFNV--------VT----LDEI----VDKGDFF  316 (479)
T ss_dssp             CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCEE--------CC----HHHH----TTTCSEE
T ss_pred             ccCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCChhhHHHHHHcCCEe--------cC----HHHH----HhcCCEE
Confidence            3478999999999999999999999999 6899999887764445556521        12    2222    2578999


Q ss_pred             EeCCCcHHHH-HHHHHHhccCCEEEEEcCCC
Q 017426          267 FDCAGLNKTM-STALGATCAGGKVCLVGMGH  296 (372)
Q Consensus       267 id~~g~~~~~-~~~~~~l~~~G~~v~~g~~~  296 (372)
                      +-+.+....+ ...+..|+++..++.++...
T Consensus       317 i~~~~t~~lI~~~~l~~MK~gailiNvgrg~  347 (479)
T 1v8b_A          317 ITCTGNVDVIKLEHLLKMKNNAVVGNIGHFD  347 (479)
T ss_dssp             EECCSSSSSBCHHHHTTCCTTCEEEECSSTT
T ss_pred             EECCChhhhcCHHHHhhcCCCcEEEEeCCCC
Confidence            9887654333 25667789999888887543

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=95.56  E-value=0.052  Score=47.88  Aligned_cols=95  Identities=18%  Similarity=0.244  Sum_probs=63.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh-----CC---------CeEEecCCCcccHHHHHH
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-----GA---------DNIVKVSTNLQDIAEEVE  253 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l-----g~---------~~v~~~~~~~~~~~~~~~  253 (372)
                      .++.+||++|+|. |..+..+++. +...+++++.+++..+.+++.     +.         ..+...   ..|..+.+.
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~---~~D~~~~l~  148 (281)
T 1mjf_A           74 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLT---IGDGFEFIK  148 (281)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEE---ESCHHHHHH
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEE---ECchHHHhc
Confidence            4568999998753 6667777777 767899999999988887753     11         111111   123222222


Q ss_pred             HHHHHcCCcceEEEeCCC----------cHHHHHHHHHHhccCCEEEEE
Q 017426          254 KIQKAMGTGIDVSFDCAG----------LNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       254 ~~~~~~~~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~v~~  292 (372)
                          . .+.||+|+-...          ....++.+.+.|+++|.++..
T Consensus       149 ----~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~  192 (281)
T 1mjf_A          149 ----N-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ  192 (281)
T ss_dssp             ----H-CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred             ----c-cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence                1 467999984332          234677889999999998875

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=95.56  E-value=0.062  Score=46.54  Aligned_cols=81  Identities=10%  Similarity=0.143  Sum_probs=48.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHH---cCCCeEEEEecChhHHHHH-HHh-----CCC-eEEecCCCc-ccHHHHHHHHHH
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARA---FGAPRIVIVDVDDYRLSVA-KEI-----GAD-NIVKVSTNL-QDIAEEVEKIQK  257 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~---~g~~~vv~v~~~~~~~~~~-~~l-----g~~-~v~~~~~~~-~~~~~~~~~~~~  257 (372)
                      +.++||+|+ +++|.++++.+..   .|+ .|+++++++++.+.+ +++     +.. ..+..|-.+ ++..+.+.+..+
T Consensus         6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (259)
T 1oaa_A            6 CAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence            567899987 9999998888877   898 578888887765433 333     322 122233222 223333333322


Q ss_pred             H-cCCcce--EEEeCCC
Q 017426          258 A-MGTGID--VSFDCAG  271 (372)
Q Consensus       258 ~-~~~~~d--~vid~~g  271 (372)
                      . ..+++|  ++|++.|
T Consensus        85 ~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           85 LPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             SCCCTTCCEEEEEECCC
T ss_pred             ccccccCCccEEEECCc
Confidence            0 124677  9998765

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=95.54  E-value=0.19  Score=45.57  Aligned_cols=131  Identities=18%  Similarity=0.273  Sum_probs=79.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCeEEEEecChhHHH-HHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          192 NVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      +|.|+|+|.+|...+..++.. +++.+.+.++++++.+ +++++|...+.      .++.+    +.+  ...+|+|+.|
T Consensus         4 rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~------~~~~~----ll~--~~~~D~V~i~   71 (344)
T 3ezy_A            4 RIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAY------KDPHE----LIE--DPNVDAVLVC   71 (344)
T ss_dssp             EEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEE------SSHHH----HHH--CTTCCEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCcee------CCHHH----Hhc--CCCCCEEEEc
Confidence            688999999998877766554 5654446688877755 55678865433      23322    322  3579999999


Q ss_pred             CCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchh----hhccCcEE-Ee-eccCCCcHHHHHHHHHcCCC
Q 017426          270 AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDV-VG-VFRYKNTWPLCLELLRSGKI  335 (372)
Q Consensus       270 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i-~~-~~~~~~~~~~~~~ll~~g~~  335 (372)
                      +....+.+.+..++..+ +.+.+.-......-....    .-.+++.+ .+ ...+...++.+.+++++|.+
T Consensus        72 tp~~~h~~~~~~al~~g-k~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~i  142 (344)
T 3ezy_A           72 SSTNTHSELVIACAKAK-KHVFCEKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVENGTI  142 (344)
T ss_dssp             SCGGGHHHHHHHHHHTT-CEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHTTTT
T ss_pred             CCCcchHHHHHHHHhcC-CeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEeecccCCHHHHHHHHHHHcCCC
Confidence            99877777777777754 555554221111111111    11122222 22 22336678889999999887

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=95.54  E-value=0.067  Score=47.75  Aligned_cols=99  Identities=19%  Similarity=0.197  Sum_probs=63.6

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC--------CCeEEecCCCcccHHHHHHHHHHH
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG--------ADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg--------~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      ..++.+||++|+|. |..+..+++..+...+++++.+++..+.+++.-        ...+...   ..|..+.+.    .
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~---~~Da~~~l~----~  164 (304)
T 2o07_A           93 HPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLH---VGDGFEFMK----Q  164 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE---ESCHHHHHH----T
T ss_pred             CCCCCEEEEECCCc-hHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEE---ECcHHHHHh----h
Confidence            45678999998753 667777777765568999999999888776531        1111111   123222222    1


Q ss_pred             cCCcceEEEeCCCc----------HHHHHHHHHHhccCCEEEEEc
Q 017426          259 MGTGIDVSFDCAGL----------NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       259 ~~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ..+.||+||-....          ...++.+.+.|+++|.++...
T Consensus       165 ~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  209 (304)
T 2o07_A          165 NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  209 (304)
T ss_dssp             CSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence            24679999842221          235778899999999998754

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.54  E-value=0.078  Score=45.89  Aligned_cols=34  Identities=32%  Similarity=0.531  Sum_probs=29.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      +.+|+|.|+|++|..++..+.+.|...+.+++.+
T Consensus        28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4699999999999999999999999888887554

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=95.54  E-value=0.068  Score=45.69  Aligned_cols=73  Identities=16%  Similarity=0.047  Sum_probs=47.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAF--GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~--g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~  265 (372)
                      .+.+|||+|+ |.+|..+++.+...  |. .|+++++++++.+.+ .-+.. ++..+-.+   .+.+.++.    .++|+
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~-~~~~~-~~~~D~~d---~~~~~~~~----~~~d~   72 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI-GGEAD-VFIGDITD---ADSINPAF----QGIDA   72 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT-TCCTT-EEECCTTS---HHHHHHHH----TTCSE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc-CCCee-EEEecCCC---HHHHHHHH----cCCCE
Confidence            4678999997 99999999999888  67 678888877665432 11222 22222221   23344443    36999


Q ss_pred             EEeCCC
Q 017426          266 SFDCAG  271 (372)
Q Consensus       266 vid~~g  271 (372)
                      ||.+.+
T Consensus        73 vi~~a~   78 (253)
T 1xq6_A           73 LVILTS   78 (253)
T ss_dssp             EEECCC
T ss_pred             EEEecc
Confidence            999876

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=95.53  E-value=0.024  Score=48.77  Aligned_cols=75  Identities=19%  Similarity=0.061  Sum_probs=49.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE-e--cChhHHHHH-HHh-CCCeEEecCCCcccHHHHHHHHHHHcCCcc
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-D--VDDYRLSVA-KEI-GADNIVKVSTNLQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v-~--~~~~~~~~~-~~l-g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      +.++||+|+ |.+|.++++.+...|+ .|+++ .  +++++.+.+ +++ +.+ +.    +.++..+.+.+..+ ..+++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~~~~-~~----~~~~v~~~~~~~~~-~~g~i   73 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENPGTI-AL----AEQKPERLVDATLQ-HGEAI   73 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHSTTEE-EC----CCCCGGGHHHHHGG-GSSCE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhCCCc-cc----CHHHHHHHHHHHHH-HcCCC
Confidence            457899987 9999999999999999 57777 5  777765543 444 321 11    12333333444332 23589


Q ss_pred             eEEEeCCC
Q 017426          264 DVSFDCAG  271 (372)
Q Consensus       264 d~vid~~g  271 (372)
                      |++|++.|
T Consensus        74 D~lv~~Ag   81 (244)
T 1zmo_A           74 DTIVSNDY   81 (244)
T ss_dssp             EEEEECCC
T ss_pred             CEEEECCC
Confidence            99999876

>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*

Probab=95.53  E-value=0.063  Score=47.72  Aligned_cols=98  Identities=17%  Similarity=0.170  Sum_probs=62.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC--------CCeEEecCCCcccHHHHHHHHHHHc
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG--------ADNIVKVSTNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg--------~~~v~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      ..+.+||+.|+|. |..+..+++..+...+++++.+++..+.+++.-        .+.+...   ..|..+.+    ...
T Consensus        89 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~---~~D~~~~l----~~~  160 (296)
T 1inl_A           89 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIV---IANGAEYV----RKF  160 (296)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE---ESCHHHHG----GGC
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEE---ECcHHHHH----hhC
Confidence            3458999998653 666677777766668999999999888776531        1112111   12322222    112


Q ss_pred             CCcceEEEe-CCCc----------HHHHHHHHHHhccCCEEEEEc
Q 017426          260 GTGIDVSFD-CAGL----------NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       260 ~~~~d~vid-~~g~----------~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ...||+|+- ....          ...+..+.+.|+++|.++...
T Consensus       161 ~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  205 (296)
T 1inl_A          161 KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET  205 (296)
T ss_dssp             SSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            467999984 2211          346778899999999998864

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=95.52  E-value=0.041  Score=49.26  Aligned_cols=88  Identities=20%  Similarity=0.195  Sum_probs=63.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .|.+|.|+|.|.+|..+++.++.+|. .|++.+++.++ +.+.++|+...        ++.    ++.    ...|+|+.
T Consensus       141 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~--------~l~----ell----~~aDvV~l  202 (307)
T 1wwk_A          141 EGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNE-ERAKEVNGKFV--------DLE----TLL----KESDVVTI  202 (307)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHTTCEEC--------CHH----HHH----HHCSEEEE
T ss_pred             CCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCCh-hhHhhcCcccc--------CHH----HHH----hhCCEEEE
Confidence            57789999999999999999999998 68888887776 55667776321        222    222    25799998


Q ss_pred             CCCcHH----HH-HHHHHHhccCCEEEEEcC
Q 017426          269 CAGLNK----TM-STALGATCAGGKVCLVGM  294 (372)
Q Consensus       269 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~  294 (372)
                      ++....    .+ ...+..|+++..++.++.
T Consensus       203 ~~p~~~~t~~li~~~~l~~mk~ga~lin~ar  233 (307)
T 1wwk_A          203 HVPLVESTYHLINEERLKLMKKTAILINTSR  233 (307)
T ss_dssp             CCCCSTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             ecCCChHHhhhcCHHHHhcCCCCeEEEECCC
Confidence            876432    11 346678899888888765

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.52  E-value=0.077  Score=47.47  Aligned_cols=87  Identities=14%  Similarity=0.120  Sum_probs=58.9

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCC
Q 017426          191 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  270 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  270 (372)
                      .+|.|+|+|.+|...++.+...|. .|++.++++++.+.+.+.|+...       .+..+.+        ...|+||-++
T Consensus        22 ~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~-------~~~~~~~--------~~aDvvi~~v   85 (310)
T 3doj_A           22 MEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEHGASVC-------ESPAEVI--------KKCKYTIAML   85 (310)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC-------SSHHHHH--------HHCSEEEECC
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCeEc-------CCHHHHH--------HhCCEEEEEc
Confidence            579999999999999999999998 68889999999888887775321       1222222        2467888877


Q ss_pred             CcHHHHHHHH-------HHhccCCEEEEEc
Q 017426          271 GLNKTMSTAL-------GATCAGGKVCLVG  293 (372)
Q Consensus       271 g~~~~~~~~~-------~~l~~~G~~v~~g  293 (372)
                      ..+......+       ..++++..++..+
T Consensus        86 p~~~~~~~v~~~~~~l~~~l~~g~~vv~~s  115 (310)
T 3doj_A           86 SDPCAALSVVFDKGGVLEQICEGKGYIDMS  115 (310)
T ss_dssp             SSHHHHHHHHHSTTCGGGGCCTTCEEEECS
T ss_pred             CCHHHHHHHHhCchhhhhccCCCCEEEECC
Confidence            7654444443       2344444555444

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=95.51  E-value=0.091  Score=46.13  Aligned_cols=89  Identities=21%  Similarity=0.165  Sum_probs=59.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCC-eEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCC-cceEEEeC
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDC  269 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~-~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~d~vid~  269 (372)
                      +|.|+|+|.+|.+.++.+...|.. .|++.++++++.+.++++|..... ..    +..+.        -. ..|+||.|
T Consensus         3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~-~~----~~~~~--------~~~~aDvVila   69 (281)
T 2g5c_A            3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEG-TT----SIAKV--------EDFSPDFVMLS   69 (281)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEE-ES----CGGGG--------GGTCCSEEEEC
T ss_pred             EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccc-cC----CHHHH--------hcCCCCEEEEc
Confidence            688999999999999999888862 588889999988888888864211 11    11111        13 68999999


Q ss_pred             CCcHHHH---HHHHHHhccCCEEEEEc
Q 017426          270 AGLNKTM---STALGATCAGGKVCLVG  293 (372)
Q Consensus       270 ~g~~~~~---~~~~~~l~~~G~~v~~g  293 (372)
                      +......   ......++++..++.++
T Consensus        70 vp~~~~~~v~~~l~~~l~~~~iv~~~~   96 (281)
T 2g5c_A           70 SPVRTFREIAKKLSYILSEDATVTDQG   96 (281)
T ss_dssp             SCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred             CCHHHHHHHHHHHHhhCCCCcEEEECC
Confidence            8865322   22333456666555544

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=95.50  E-value=0.077  Score=48.41  Aligned_cols=131  Identities=11%  Similarity=0.030  Sum_probs=80.9

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc-CCCeEEEEecChhHHH-HHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          191 TNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      -+|.|+|+|.+|...+..++.. +++.+.+.++++++.+ +++++|+..   +    .++.+    +..  ...+|+|+.
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~---~----~~~~~----~l~--~~~~D~V~i   72 (354)
T 3db2_A            6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG---D----ATMEA----LLA--REDVEMVII   72 (354)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC---C----SSHHH----HHH--CSSCCEEEE
T ss_pred             ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC---c----CCHHH----Hhc--CCCCCEEEE
Confidence            3789999999999888777765 7755556688887765 456778653   2    23332    322  357999999


Q ss_pred             CCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchh----hhccCcEE-Eee-ccCCCcHHHHHHHHHcCCC
Q 017426          269 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDV-VGV-FRYKNTWPLCLELLRSGKI  335 (372)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i-~~~-~~~~~~~~~~~~ll~~g~~  335 (372)
                      |+....+.+.+..++.. |+.+.+.-......-....    .-.+++.+ .+. ..+...++.+.+++++|.+
T Consensus        73 ~tp~~~h~~~~~~al~~-gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i~~g~i  144 (354)
T 3db2_A           73 TVPNDKHAEVIEQCARS-GKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMIDTKEI  144 (354)
T ss_dssp             CSCTTSHHHHHHHHHHT-TCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHHHHHHHHHTTTT
T ss_pred             eCChHHHHHHHHHHHHc-CCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHHHHHHHHhcCCC
Confidence            99987777778877775 4555554221111111111    11222222 222 2336678888999999887

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=95.49  E-value=0.23  Score=41.96  Aligned_cols=102  Identities=14%  Similarity=0.192  Sum_probs=66.2

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHH----hCCC--eEEecCCCcccHHHHHHHHH
Q 017426          184 RANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGAD--NIVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       184 ~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~----lg~~--~v~~~~~~~~~~~~~~~~~~  256 (372)
                      ..+.+++.+||-+|+| .|..++.+++.++ ...+++++.+++..+.+++    .|..  .+....   .+..+.+..+ 
T Consensus        51 ~~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~---gda~~~l~~~-  125 (221)
T 3dr5_A           51 TTNGNGSTGAIAITPA-AGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLL---SRPLDVMSRL-  125 (221)
T ss_dssp             HSCCTTCCEEEEESTT-HHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC---SCHHHHGGGS-
T ss_pred             hhCCCCCCCEEEEcCC-chHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEE---cCHHHHHHHh-
Confidence            3455566799989876 4888889998863 2379999999988776654    4543  222211   2322222111 


Q ss_pred             HHcCCcceEEEeCCCc---HHHHHHHHHHhccCCEEEEE
Q 017426          257 KAMGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~  292 (372)
                        ..+.||+||-....   ...+..+.+.|+++|.++.-
T Consensus       126 --~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  162 (221)
T 3dr5_A          126 --ANDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLA  162 (221)
T ss_dssp             --CTTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEET
T ss_pred             --cCCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEe
Confidence              14689999854332   24677889999999998864

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=95.47  E-value=0.1  Score=48.54  Aligned_cols=96  Identities=17%  Similarity=0.127  Sum_probs=60.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCC--CeEEEEecChhHHHHH-HHhCC-----CeEEecCCCcccHHHHHHHHHHHcCCcc
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGA--PRIVIVDVDDYRLSVA-KEIGA-----DNIVKVSTNLQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~--~~vv~v~~~~~~~~~~-~~lg~-----~~v~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      +|+|+|+|.+|..+++.+...|.  ..|++++++.++.+.+ +.++.     ...+..+-.+   .+.+.++.+.  .++
T Consensus         3 kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d---~~~l~~~l~~--~~~   77 (405)
T 4ina_A            3 KVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADS---IEELVALINE--VKP   77 (405)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTC---HHHHHHHHHH--HCC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCC---HHHHHHHHHh--hCC
Confidence            79999999999999998888773  3688888888876644 44431     2222222221   1233333321  258


Q ss_pred             eEEEeCCCcHHHHHHHHHHhccCCEEEEE
Q 017426          264 DVSFDCAGLNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       264 d~vid~~g~~~~~~~~~~~l~~~G~~v~~  292 (372)
                      |+||++++.......+..++..+-.++..
T Consensus        78 DvVin~ag~~~~~~v~~a~l~~g~~vvD~  106 (405)
T 4ina_A           78 QIVLNIALPYQDLTIMEACLRTGVPYLDT  106 (405)
T ss_dssp             SEEEECSCGGGHHHHHHHHHHHTCCEEES
T ss_pred             CEEEECCCcccChHHHHHHHHhCCCEEEe
Confidence            99999998654444455566666566654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.45  E-value=0.078  Score=48.17  Aligned_cols=77  Identities=21%  Similarity=0.326  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc-CCCeEEEEecChhHHHHH-HHhCCC--eEEecCCCcccHHHHHHHHHHHcCCcc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVA-KEIGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~~~-~~lg~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      .+.+|||+|+ |.+|..+++.+... |...|+++++++.+.+.+ +.+...  ..+..+-.  + .+.+.+..    .++
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~--d-~~~l~~~~----~~~   92 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVR--D-LERLNYAL----EGV   92 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTT--C-HHHHHHHT----TTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCC--C-HHHHHHHH----hcC
Confidence            4679999997 99999999888887 875688888888766544 334321  12222222  2 22343332    479


Q ss_pred             eEEEeCCCc
Q 017426          264 DVSFDCAGL  272 (372)
Q Consensus       264 d~vid~~g~  272 (372)
                      |+||.+.+.
T Consensus        93 D~Vih~Aa~  101 (344)
T 2gn4_A           93 DICIHAAAL  101 (344)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998864

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=95.44  E-value=0.034  Score=48.78  Aligned_cols=81  Identities=22%  Similarity=0.195  Sum_probs=49.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH----HHHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV----AKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~----~~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .+.++||+|+ |.+|.+++..+...|+ .|+++++++++.+.    ++..+... .+..|-.+ .++.+.+.++.+. .+
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g  110 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKD-FG  110 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHH-hC
Confidence            3678999987 9999999998888898 57777676654332    22334322 22233222 2333344433322 25


Q ss_pred             cceEEEeCCC
Q 017426          262 GIDVSFDCAG  271 (372)
Q Consensus       262 ~~d~vid~~g  271 (372)
                      ++|++|++.|
T Consensus       111 ~id~li~~Ag  120 (279)
T 3ctm_A          111 TIDVFVANAG  120 (279)
T ss_dssp             CCSEEEECGG
T ss_pred             CCCEEEECCc
Confidence            7999999865

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=95.42  E-value=0.2  Score=44.66  Aligned_cols=100  Identities=20%  Similarity=0.110  Sum_probs=64.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC--------CCeEEecCCCcccHHHHHHHHHHH
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG--------ADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg--------~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      .+++.+||++|+|. |..+..+++..+...+++++.+++..+.+++.-        ...+...   ..|..+.+...   
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~---~~D~~~~~~~~---  165 (304)
T 3bwc_A           93 HPKPERVLIIGGGD-GGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVR---VGDGLAFVRQT---  165 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE---ESCHHHHHHSS---
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEE---ECcHHHHHHhc---
Confidence            46678999998753 667777777655568999999998888776532        1111111   12332222110   


Q ss_pred             cCCcceEEEeCCCc----------HHHHHHHHHHhccCCEEEEEc
Q 017426          259 MGTGIDVSFDCAGL----------NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       259 ~~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ..+.||+|+.....          ...+..+.+.|+++|.++...
T Consensus       166 ~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  210 (304)
T 3bwc_A          166 PDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG  210 (304)
T ss_dssp             CTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence            24679999853321          246778899999999998864

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=95.42  E-value=0.078  Score=46.85  Aligned_cols=76  Identities=13%  Similarity=0.223  Sum_probs=49.6

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHh----CCCeEEecCCCcccHHHHHHHHHHHcCC
Q 017426          188 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEI----GADNIVKVSTNLQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       188 ~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~l----g~~~v~~~~~~~~~~~~~~~~~~~~~~~  261 (372)
                      -+|.++||+|+ |++|.+++..+...|++ |+++++++++.+. ++++    +...+ ..+-.+   .+.+.+..    .
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~-V~i~~R~~~~~~~l~~~~~~~~~~~~~-~~D~~~---~~~~~~~~----~  187 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGRKLDKAQAAADSVNKRFKVNVT-AAETAD---DASRAEAV----K  187 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHHHHHHTCCCE-EEECCS---HHHHHHHT----T
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEECCHHHHHHHHHHHHhcCCcEEE-EecCCC---HHHHHHHH----H
Confidence            36789999995 99999999999999995 8888888776553 3333    32221 111111   12333332    4


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      .+|++|+++|.
T Consensus       188 ~~DvlVn~ag~  198 (287)
T 1lu9_A          188 GAHFVFTAGAI  198 (287)
T ss_dssp             TCSEEEECCCT
T ss_pred             hCCEEEECCCc
Confidence            58999999863

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=95.41  E-value=0.14  Score=44.56  Aligned_cols=100  Identities=14%  Similarity=0.162  Sum_probs=67.6

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh----CCC---eEEecCCCcccHHHHHHH
Q 017426          182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GAD---NIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       182 l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l----g~~---~v~~~~~~~~~~~~~~~~  254 (372)
                      ++...++++.+||-+|+|. |..+..+++..+. .+++++.+++..+.+++.    |..   .++..+.....+      
T Consensus        54 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------  125 (273)
T 3bus_A           54 IALLDVRSGDRVLDVGCGI-GKPAVRLATARDV-RVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPF------  125 (273)
T ss_dssp             HHHSCCCTTCEEEEESCTT-SHHHHHHHHHSCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS------
T ss_pred             HHhcCCCCCCEEEEeCCCC-CHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCC------
Confidence            3567788999999999864 7788888888786 799999999877766542    422   222211111110      


Q ss_pred             HHHHcCCcceEEEeC-----CC-cHHHHHHHHHHhccCCEEEEEc
Q 017426          255 IQKAMGTGIDVSFDC-----AG-LNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       255 ~~~~~~~~~d~vid~-----~g-~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                          ..+.+|+|+..     .. ....+..+.+.|+|+|+++...
T Consensus       126 ----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~  166 (273)
T 3bus_A          126 ----EDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIAD  166 (273)
T ss_dssp             ----CTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             ----CCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence                13579999842     22 2346778888999999988765

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=95.41  E-value=0.037  Score=48.57  Aligned_cols=94  Identities=15%  Similarity=0.202  Sum_probs=57.7

Q ss_pred             EEEEECC-CHHHHHHHHHHHHc--CCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          192 NVLIMGA-GPIGLVTMLAARAF--GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~--g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      +|||+|+ |.+|..+++.+...  |.+ |+++++++++.+.+...+... +..|-.+   .+.+.+..    .++|+||.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~-V~~~~r~~~~~~~l~~~~~~~-~~~D~~d---~~~l~~~~----~~~d~vi~   72 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQ-IIAIVRNVEKASTLADQGVEV-RHGDYNQ---PESLQKAF----AGVSKLLF   72 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGG-EEEEESCTTTTHHHHHTTCEE-EECCTTC---HHHHHHHT----TTCSEEEE
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCe-EEEEEcCHHHHhHHhhcCCeE-EEeccCC---HHHHHHHH----hcCCEEEE
Confidence            6899998 99999999888877  874 677777776655444445432 2222221   22344332    46999999


Q ss_pred             CCCcH-------HHHHHHHHHhccC--CEEEEEcC
Q 017426          269 CAGLN-------KTMSTALGATCAG--GKVCLVGM  294 (372)
Q Consensus       269 ~~g~~-------~~~~~~~~~l~~~--G~~v~~g~  294 (372)
                      +.+..       .....+++.+...  ++++.++.
T Consensus        73 ~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss  107 (287)
T 2jl1_A           73 ISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGY  107 (287)
T ss_dssp             CCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred             cCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            88741       1223444444433  47887764

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=95.37  E-value=0.046  Score=49.07  Aligned_cols=88  Identities=19%  Similarity=0.213  Sum_probs=63.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .|.+|.|+|.|.+|..+++.++.+|+ .|++.+++.++. .+.++|+..    .    ++.    ++.    ...|+|+.
T Consensus       141 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~----~----~l~----ell----~~aDvVvl  202 (313)
T 2ekl_A          141 AGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIRE-KAEKINAKA----V----SLE----ELL----KNSDVISL  202 (313)
T ss_dssp             TTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHH-HHHHTTCEE----C----CHH----HHH----HHCSEEEE
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchh-HHHhcCcee----c----CHH----HHH----hhCCEEEE
Confidence            67899999999999999999999998 688888877664 456677542    1    222    222    25799998


Q ss_pred             CCCcHHH----H-HHHHHHhccCCEEEEEcC
Q 017426          269 CAGLNKT----M-STALGATCAGGKVCLVGM  294 (372)
Q Consensus       269 ~~g~~~~----~-~~~~~~l~~~G~~v~~g~  294 (372)
                      ++.....    + ...+..|+++..++.++.
T Consensus       203 ~~P~~~~t~~li~~~~l~~mk~ga~lIn~ar  233 (313)
T 2ekl_A          203 HVTVSKDAKPIIDYPQFELMKDNVIIVNTSR  233 (313)
T ss_dssp             CCCCCTTSCCSBCHHHHHHSCTTEEEEESSC
T ss_pred             eccCChHHHHhhCHHHHhcCCCCCEEEECCC
Confidence            8764321    1 356678888887777764

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=95.34  E-value=0.11  Score=47.85  Aligned_cols=86  Identities=17%  Similarity=0.112  Sum_probs=52.0

Q ss_pred             cCC-CCCCEEEEECC-CHHHHHHHHHHHH-cCCCeEEEEecChhH----------------HHHHHHhCCCeE-EecCCC
Q 017426          185 ANI-GPETNVLIMGA-GPIGLVTMLAARA-FGAPRIVIVDVDDYR----------------LSVAKEIGADNI-VKVSTN  244 (372)
Q Consensus       185 ~~~-~~g~~vlI~Ga-g~~G~~ai~l~~~-~g~~~vv~v~~~~~~----------------~~~~~~lg~~~v-~~~~~~  244 (372)
                      ..+ ..+.++||+|+ +++|.++++.+.. .|+ .|++++++.+.                .+.+++.|.... +..|-.
T Consensus        41 ~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA-~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvt  119 (405)
T 3zu3_A           41 GPIANGPKRVLVIGASTGYGLAARITAAFGCGA-DTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAF  119 (405)
T ss_dssp             CCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             CCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCC-EEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCC
Confidence            444 45667788987 9999998888887 999 46666554321                223455564332 333322


Q ss_pred             c-ccHHHHHHHHHHHcCCcceEEEeCCCc
Q 017426          245 L-QDIAEEVEKIQKAMGTGIDVSFDCAGL  272 (372)
Q Consensus       245 ~-~~~~~~~~~~~~~~~~~~d~vid~~g~  272 (372)
                      + ++..+.+.+..+ ..+++|+++++.|.
T Consensus       120 d~~~v~~~v~~i~~-~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          120 SDEIKQLTIDAIKQ-DLGQVDQVIYSLAS  147 (405)
T ss_dssp             SHHHHHHHHHHHHH-HTSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHH-HcCCCCEEEEcCcc
Confidence            2 333334444433 24689999998875

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=95.33  E-value=0.084  Score=47.59  Aligned_cols=130  Identities=19%  Similarity=0.173  Sum_probs=76.8

Q ss_pred             EEEEECCCHHHHHH-HHHHHHcCCCeEEEEecChhHHH-HHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          192 NVLIMGAGPIGLVT-MLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       192 ~vlI~Gag~~G~~a-i~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      +|.|+|+|.+|... +..++..+.+.+.+.++++++.+ +.+++|...+  +    .++.    ++.+  ...+|+|+.+
T Consensus         2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~--~----~~~~----~~l~--~~~~D~V~i~   69 (332)
T 2glx_A            2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKS--V----TSVE----ELVG--DPDVDAVYVS   69 (332)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCC--B----SCHH----HHHT--CTTCCEEEEC
T ss_pred             eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcc--c----CCHH----HHhc--CCCCCEEEEe
Confidence            68899999999876 54444477755556788887765 4566776422  1    2322    2321  2479999999


Q ss_pred             CCcHHHHHHHHHHhccCCEEEEEcCCCCCccc-cchhh----hccCcEEE-ee-ccCCCcHHHHHHHHHcCCC
Q 017426          270 AGLNKTMSTALGATCAGGKVCLVGMGHHEMTV-PLTPA----AVREVDVV-GV-FRYKNTWPLCLELLRSGKI  335 (372)
Q Consensus       270 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~----~~~~~~i~-~~-~~~~~~~~~~~~ll~~g~~  335 (372)
                      +....+.+.+..+|.. |+.+.+.-. ...+. ....+    -.+++.+. +. ..+...+..+.+++++|.+
T Consensus        70 tp~~~h~~~~~~al~~-Gk~v~~ekP-~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~g~i  140 (332)
T 2glx_A           70 TTNELHREQTLAAIRA-GKHVLCEKP-LAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIAEGRI  140 (332)
T ss_dssp             SCGGGHHHHHHHHHHT-TCEEEECSS-SCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHTTTT
T ss_pred             CChhHhHHHHHHHHHC-CCeEEEeCC-CcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHHHHHHHHHcCCC
Confidence            9987677777777775 555555321 11111 11111    11233222 22 1235567888889998877

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=95.32  E-value=0.22  Score=41.87  Aligned_cols=75  Identities=13%  Similarity=0.056  Sum_probs=53.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-HhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCC
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  270 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  270 (372)
                      +|+|+|+|.+|..+++.+...|. .|++++.++++.+.+. .++... +.-+..+   .+.+++.   +-..+|+++-++
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~~-i~gd~~~---~~~l~~a---~i~~ad~vi~~~   73 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKATI-IHGDGSH---KEILRDA---EVSKNDVVVILT   73 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSEE-EESCTTS---HHHHHHH---TCCTTCEEEECC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCeE-EEcCCCC---HHHHHhc---CcccCCEEEEec
Confidence            58899999999999999999998 4888889999887654 456543 3222222   1223322   346899999999


Q ss_pred             CcHH
Q 017426          271 GLNK  274 (372)
Q Consensus       271 g~~~  274 (372)
                      +...
T Consensus        74 ~~d~   77 (218)
T 3l4b_C           74 PRDE   77 (218)
T ss_dssp             SCHH
T ss_pred             CCcH
Confidence            8753

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=95.31  E-value=0.18  Score=39.76  Aligned_cols=95  Identities=11%  Similarity=0.140  Sum_probs=57.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecC-hhHHHHHHH-h--CCCeEEecCCCcccHHHHHHHHHHHcCCcceE
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD-DYRLSVAKE-I--GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~-~~~~~~~~~-l--g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~  265 (372)
                      ..+++|.|+|.+|...++.+...|.+ |++++++ +++.+.++. +  |.. ++.-+..+   .+.+++.   .-.++|+
T Consensus         3 ~~~vlI~G~G~vG~~la~~L~~~g~~-V~vid~~~~~~~~~~~~~~~~~~~-~i~gd~~~---~~~l~~a---~i~~ad~   74 (153)
T 1id1_A            3 KDHFIVCGHSILAINTILQLNQRGQN-VTVISNLPEDDIKQLEQRLGDNAD-VIPGDSND---SSVLKKA---GIDRCRA   74 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTCC-EEEEECCCHHHHHHHHHHHCTTCE-EEESCTTS---HHHHHHH---TTTTCSE
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCCC-EEEEECCChHHHHHHHHhhcCCCe-EEEcCCCC---HHHHHHc---ChhhCCE
Confidence            46899999999999999999999985 7777776 455554432 3  333 33222221   2233322   2368999


Q ss_pred             EEeCCCcHHHHH---HHHHHhccCCEEEEE
Q 017426          266 SFDCAGLNKTMS---TALGATCAGGKVCLV  292 (372)
Q Consensus       266 vid~~g~~~~~~---~~~~~l~~~G~~v~~  292 (372)
                      |+-+++....-.   ...+.+.+..+++..
T Consensus        75 vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           75 ILALSDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             EEECSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             EEEecCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            999988753211   223334444555543

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=95.30  E-value=0.15  Score=43.89  Aligned_cols=101  Identities=16%  Similarity=0.152  Sum_probs=65.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEecChhHHHHHHH----hCCCe-EEecCCCcccHHHHHHHHHHHc
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAF--GAPRIVIVDVDDYRLSVAKE----IGADN-IVKVSTNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~--g~~~vv~v~~~~~~~~~~~~----lg~~~-v~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      ..++.+||-+|+| .|..++.+++.+  +. .+++++.+++..+.+++    .|... +...   ..+..+.+..+...+
T Consensus        77 ~~~~~~VLeiG~G-~G~~~~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~---~gda~~~l~~l~~~~  151 (247)
T 1sui_A           77 LINAKNTMEIGVY-TGYSLLATALAIPEDG-KILAMDINKENYELGLPVIKKAGVDHKIDFR---EGPALPVLDEMIKDE  151 (247)
T ss_dssp             HTTCCEEEEECCG-GGHHHHHHHHHSCTTC-EEEEEESCCHHHHHHHHHHHHTTCGGGEEEE---ESCHHHHHHHHHHSG
T ss_pred             hhCcCEEEEeCCC-cCHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCCeEEE---ECCHHHHHHHHHhcc
Confidence            3456799999875 477888888886  44 79999999988777654    35422 2111   123333333332111


Q ss_pred             --CCcceEEEeCCC---cHHHHHHHHHHhccCCEEEEE
Q 017426          260 --GTGIDVSFDCAG---LNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       260 --~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~  292 (372)
                        .+.||+||-...   ....+..+.+.|+++|.++.-
T Consensus       152 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  189 (247)
T 1sui_A          152 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD  189 (247)
T ss_dssp             GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred             CCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEe
Confidence              367999984322   234677889999999998764

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=95.29  E-value=0.031  Score=49.02  Aligned_cols=94  Identities=12%  Similarity=0.125  Sum_probs=56.0

Q ss_pred             EEEEECC-CHHHHHHHHHHHHc--CCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          192 NVLIMGA-GPIGLVTMLAARAF--GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~--g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      +|||+|+ |.+|..+++.+...  |.+ |+++++++++.+.+...+... +..+-.+   .+.+.+..    .++|+||.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~-V~~~~r~~~~~~~~~~~~~~~-~~~D~~d---~~~~~~~~----~~~d~vi~   71 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQ-IVAIVRNPAKAQALAAQGITV-RQADYGD---EAALTSAL----QGVEKLLL   71 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGG-EEEEESCTTTCHHHHHTTCEE-EECCTTC---HHHHHHHT----TTCSEEEE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCce-EEEEEcChHhhhhhhcCCCeE-EEcCCCC---HHHHHHHH----hCCCEEEE
Confidence            5899998 99999999988877  884 677777776655444445432 2222222   12343332    46899999


Q ss_pred             CCCcH-----HHHHHHHHHhccC--CEEEEEcC
Q 017426          269 CAGLN-----KTMSTALGATCAG--GKVCLVGM  294 (372)
Q Consensus       269 ~~g~~-----~~~~~~~~~l~~~--G~~v~~g~  294 (372)
                      +.+..     .....+++.+...  ++++.++.
T Consensus        72 ~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss  104 (286)
T 2zcu_A           72 ISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL  104 (286)
T ss_dssp             CC--------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred             eCCCCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            88742     1223444444332  57887764

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=95.29  E-value=0.026  Score=46.77  Aligned_cols=95  Identities=25%  Similarity=0.272  Sum_probs=57.5

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      .+|||+|+ |.+|..+++.+...|. .|+++++++++.+....-+. .++..+-.  + .+.+.+..    .++|+||.+
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~--~-~~~~~~~~----~~~d~vi~~   74 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPA-HVVVGDVL--Q-AADVDKTV----AGQDAVIVL   74 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCS-EEEESCTT--S-HHHHHHHH----TTCSEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhcccccCCce-EEEEecCC--C-HHHHHHHH----cCCCEEEEC
Confidence            58999998 9999999999998997 57777787765432111122 22222222  2 22344443    468999998


Q ss_pred             CCcHH----------HHHHHHHHhcc--CCEEEEEcC
Q 017426          270 AGLNK----------TMSTALGATCA--GGKVCLVGM  294 (372)
Q Consensus       270 ~g~~~----------~~~~~~~~l~~--~G~~v~~g~  294 (372)
                      .+...          ....+++.+..  -++++.++.
T Consensus        75 a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss  111 (206)
T 1hdo_A           75 LGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (206)
T ss_dssp             CCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             ccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence            87431          12334444433  357887763

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=95.29  E-value=0.12  Score=44.06  Aligned_cols=104  Identities=15%  Similarity=0.177  Sum_probs=65.8

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHHHc--
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAM--  259 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~~~--  259 (372)
                      ..++.+||-+|+| .|..++.+++.+. ...+++++.+++..+.+++    .|....+.+.  ..+..+.+..+...+  
T Consensus        68 ~~~~~~VLeiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~--~gda~~~l~~l~~~~~~  144 (237)
T 3c3y_A           68 LVNAKKTIEVGVF-TGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFI--ESDAMLALDNLLQGQES  144 (237)
T ss_dssp             HTTCCEEEEECCT-TSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEE--ESCHHHHHHHHHHSTTC
T ss_pred             hhCCCEEEEeCCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EcCHHHHHHHHHhccCC
Confidence            3466799999875 3777788888863 3479999999988777654    3543211111  133334343332211  


Q ss_pred             CCcceEEEeCCCc---HHHHHHHHHHhccCCEEEEEc
Q 017426          260 GTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       260 ~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      .+.||+||-....   ...++.+.+.|+++|.++.-.
T Consensus       145 ~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~  181 (237)
T 3c3y_A          145 EGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDN  181 (237)
T ss_dssp             TTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEec
Confidence            3579999854332   345778889999999887643

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=95.26  E-value=0.13  Score=46.46  Aligned_cols=100  Identities=21%  Similarity=0.237  Sum_probs=65.1

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC------C--CeEEecCCCcccHHHHHHHHHH
Q 017426          186 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG------A--DNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       186 ~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg------~--~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      ...++.+||++|+|. |..+..+++..+...|++++.+++..+.+++.-      .  ..+...   ..|..+.+...  
T Consensus       117 ~~~~~~~VLdIG~G~-G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~---~~D~~~~l~~~--  190 (334)
T 1xj5_A          117 SIPNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLV---IGDGVAFLKNA--  190 (334)
T ss_dssp             TSSCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEE---ESCHHHHHHTS--
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEE---ECCHHHHHHhc--
Confidence            345678999998753 667777887765558999999999888776531      1  112111   13333322211  


Q ss_pred             HcCCcceEEEeCCC----------cHHHHHHHHHHhccCCEEEEE
Q 017426          258 AMGTGIDVSFDCAG----------LNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       258 ~~~~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~v~~  292 (372)
                       ..+.||+||-...          ....+..+.+.|+++|.++..
T Consensus       191 -~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~  234 (334)
T 1xj5_A          191 -AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ  234 (334)
T ss_dssp             -CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred             -cCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence             1357999985322          235778899999999999875

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=95.25  E-value=0.042  Score=50.11  Aligned_cols=90  Identities=20%  Similarity=0.251  Sum_probs=64.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .|.+|.|+|.|.+|..+++.++.+|+ .|++.++++...+.++++|+..+       .+    +.++.    ...|+|+-
T Consensus       163 ~gktvGIIG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~----l~ell----~~aDvV~l  226 (351)
T 3jtm_A          163 EGKTIGTVGAGRIGKLLLQRLKPFGC-NLLYHDRLQMAPELEKETGAKFV-------ED----LNEML----PKCDVIVI  226 (351)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCC-EEEEECSSCCCHHHHHHHCCEEC-------SC----HHHHG----GGCSEEEE
T ss_pred             cCCEEeEEEeCHHHHHHHHHHHHCCC-EEEEeCCCccCHHHHHhCCCeEc-------CC----HHHHH----hcCCEEEE
Confidence            57899999999999999999999999 58888887766677777786432       12    22222    46888888


Q ss_pred             CCCcHH----H-HHHHHHHhccCCEEEEEcC
Q 017426          269 CAGLNK----T-MSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       269 ~~g~~~----~-~~~~~~~l~~~G~~v~~g~  294 (372)
                      ++....    . -...+..|+++..++.++.
T Consensus       227 ~~Plt~~t~~li~~~~l~~mk~gailIN~aR  257 (351)
T 3jtm_A          227 NMPLTEKTRGMFNKELIGKLKKGVLIVNNAR  257 (351)
T ss_dssp             CSCCCTTTTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             CCCCCHHHHHhhcHHHHhcCCCCCEEEECcC
Confidence            766321    1 1356677888877777654

>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}

Probab=95.23  E-value=0.11  Score=47.76  Aligned_cols=131  Identities=18%  Similarity=0.206  Sum_probs=81.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHc--------CCCeEEEEecChhHHH-HHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCc
Q 017426          192 NVLIMGAGPIGLVTMLAARAF--------GAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~--------g~~~vv~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~  262 (372)
                      +|-|+|+|.+|...+...+..        +++.+.++++++++.+ +++++|...+.      .++    +++.+  ...
T Consensus         8 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~------~d~----~~ll~--~~~   75 (390)
T 4h3v_A            8 GIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTE------TDW----RTLLE--RDD   75 (390)
T ss_dssp             EEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEE------SCH----HHHTT--CTT
T ss_pred             cEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCccc------CCH----HHHhc--CCC
Confidence            678899999998765555432        2345566678877655 56788976543      233    33332  357


Q ss_pred             ceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhh---h----ccCc-EEEee-ccCCCcHHHHHHHHHcC
Q 017426          263 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPA---A----VREV-DVVGV-FRYKNTWPLCLELLRSG  333 (372)
Q Consensus       263 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~---~----~~~~-~i~~~-~~~~~~~~~~~~ll~~g  333 (372)
                      +|+|+-|+....+.+.+..+|. .|+.|.+.-.-....-....+   .    .+++ -..+. ..+...+..+.+++++|
T Consensus        76 iDaV~I~tP~~~H~~~~~~al~-aGkhVl~EKPla~t~~ea~~l~~~~~~~~~~g~~~~v~~~~R~~p~~~~~k~~i~~g  154 (390)
T 4h3v_A           76 VQLVDVCTPGDSHAEIAIAALE-AGKHVLCEKPLANTVAEAEAMAAAAAKAAAGGIRSMVGFTYRRVPAIALARKLVADG  154 (390)
T ss_dssp             CSEEEECSCGGGHHHHHHHHHH-TTCEEEEESSSCSSHHHHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHHHTT
T ss_pred             CCEEEEeCChHHHHHHHHHHHH-cCCCceeecCcccchhHHHHHHHHHHHHHhcCCceEEEeeeccCchHHHHHHHHHcC
Confidence            9999999998878888888887 566777753221111111111   1    1222 22333 23366788899999998


Q ss_pred             CC
Q 017426          334 KI  335 (372)
Q Consensus       334 ~~  335 (372)
                      .+
T Consensus       155 ~i  156 (390)
T 4h3v_A          155 KI  156 (390)
T ss_dssp             SS
T ss_pred             CC
Confidence            87

>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}

Probab=95.23  E-value=0.16  Score=42.71  Aligned_cols=96  Identities=15%  Similarity=0.244  Sum_probs=64.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCC-----------eEEecCCCcccHHHHHHHH
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD-----------NIVKVSTNLQDIAEEVEKI  255 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~-----------~v~~~~~~~~~~~~~~~~~  255 (372)
                      ++++.+||-.|+|. |..+..+++. |. .+++++.+++..+.+++.-..           .++..+.....        
T Consensus        28 ~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--------   96 (235)
T 3sm3_A           28 LQEDDEILDIGCGS-GKISLELASK-GY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS--------   96 (235)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC--------
T ss_pred             CCCCCeEEEECCCC-CHHHHHHHhC-CC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC--------
Confidence            56889999999864 7777777776 77 799999999988888763321           12211111100        


Q ss_pred             HHHcCCcceEEEeCC-----CcH----HHHHHHHHHhccCCEEEEEcCC
Q 017426          256 QKAMGTGIDVSFDCA-----GLN----KTMSTALGATCAGGKVCLVGMG  295 (372)
Q Consensus       256 ~~~~~~~~d~vid~~-----g~~----~~~~~~~~~l~~~G~~v~~g~~  295 (372)
                        .....+|+|+...     ..+    ..+..+.+.|+++|.++.....
T Consensus        97 --~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  143 (235)
T 3sm3_A           97 --FHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFG  143 (235)
T ss_dssp             --SCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred             --CCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECC
Confidence              0146799998532     122    4677888999999999887543

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=95.22  E-value=0.02  Score=52.51  Aligned_cols=91  Identities=16%  Similarity=0.248  Sum_probs=62.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .|.+|.|+|.|.+|..+++.++.+|++.|++.+++..+.+.+.++|+..+       .++.    ++.    ...|+|+.
T Consensus       163 ~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~-------~~l~----ell----~~aDvV~l  227 (364)
T 2j6i_A          163 EGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRV-------ENIE----ELV----AQADIVTV  227 (364)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEEC-------SSHH----HHH----HTCSEEEE
T ss_pred             CCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEec-------CCHH----HHH----hcCCEEEE
Confidence            67899999999999999999999998437888877766666667774321       1222    222    25788888


Q ss_pred             CCCcHH----HH-HHHHHHhccCCEEEEEcC
Q 017426          269 CAGLNK----TM-STALGATCAGGKVCLVGM  294 (372)
Q Consensus       269 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~  294 (372)
                      ++....    .+ ...+..|+++..++.++.
T Consensus       228 ~~P~t~~t~~li~~~~l~~mk~ga~lIn~ar  258 (364)
T 2j6i_A          228 NAPLHAGTKGLINKELLSKFKKGAWLVNTAR  258 (364)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CCCCChHHHHHhCHHHHhhCCCCCEEEECCC
Confidence            776531    11 235567777777776654

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=95.22  E-value=0.011  Score=51.03  Aligned_cols=76  Identities=18%  Similarity=0.214  Sum_probs=46.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHH-----HHHHHHcCCc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV-----EKIQKAMGTG  262 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~-----~~~~~~~~~~  262 (372)
                      .+.++||+|+ |++|.++++.+.. |. .|+++++++++.+.+.+..-...+..     |+.+..     .+..+ ..++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~-----D~~~~~~~~~~~~~~~-~~~~   75 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEHLAALAEIEGVEPIES-----DIVKEVLEEGGVDKLK-NLDH   75 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHHTSTTEEEEEC-----CHHHHHHTSSSCGGGT-TCSC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHhhcCCcceec-----ccchHHHHHHHHHHHH-hcCC
Confidence            3678999987 9999998887765 77 68888888888776665432222221     221111     01111 1247


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|++|++.|.
T Consensus        76 id~lv~~Ag~   85 (245)
T 3e9n_A           76 VDTLVHAAAV   85 (245)
T ss_dssp             CSEEEECC--
T ss_pred             CCEEEECCCc
Confidence            9999998875

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=95.20  E-value=0.077  Score=48.16  Aligned_cols=130  Identities=17%  Similarity=0.100  Sum_probs=78.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCeEEEEecChhHHHH-HHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          192 NVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSV-AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      +|.|+|+|.+|...+..++.. +++.+.+.++++++.+. ++++|+. .  +    .++.    ++.+  ...+|+|+.|
T Consensus         6 rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~-~--~----~~~~----~~l~--~~~~D~V~i~   72 (344)
T 3euw_A            6 RIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAE-A--V----ASPD----EVFA--RDDIDGIVIG   72 (344)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCE-E--E----SSHH----HHTT--CSCCCEEEEC
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCc-e--e----CCHH----HHhc--CCCCCEEEEe
Confidence            788999999999888877765 66545567888777554 5667742 2  2    2222    2321  3479999999


Q ss_pred             CCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchh----hhccCcE-EEee-ccCCCcHHHHHHHHHcCCC
Q 017426          270 AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVD-VVGV-FRYKNTWPLCLELLRSGKI  335 (372)
Q Consensus       270 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~-i~~~-~~~~~~~~~~~~ll~~g~~  335 (372)
                      +....+.+.+..++..+ +.+.+.-......-....    .-.+++. ..+. ..+...+..+.+++++|.+
T Consensus        73 tp~~~h~~~~~~al~~g-k~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  143 (344)
T 3euw_A           73 SPTSTHVDLITRAVERG-IPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARVANQEI  143 (344)
T ss_dssp             SCGGGHHHHHHHHHHTT-CCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCGGGGCHHHHHHHHHHHTTTT
T ss_pred             CCchhhHHHHHHHHHcC-CcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecchhhcCHHHHHHHHHHhcCCC
Confidence            99877777777777754 555554221110111111    1122222 2222 2236678888999999887

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=95.19  E-value=0.079  Score=44.77  Aligned_cols=101  Identities=17%  Similarity=0.141  Sum_probs=63.2

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHHHh-C-CCe--EEecCCCcccHHHHHHHHHHH
Q 017426          184 RANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEI-G-ADN--IVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       184 ~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~~l-g-~~~--v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      ...++++++||-.|+|. |..+..+++..|. ..|++++.+++..+.+.+. . ...  ++..+......   ...    
T Consensus        68 ~~~~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~~----  139 (227)
T 1g8a_A           68 NFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEE---YRA----  139 (227)
T ss_dssp             CCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGG---GTT----
T ss_pred             hcCCCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcch---hhc----
Confidence            34578999999999865 7788888887642 4799999999765544331 1 111  22211111000   000    


Q ss_pred             cCCcceEEEeCCCcH----HHHHHHHHHhccCCEEEEE
Q 017426          259 MGTGIDVSFDCAGLN----KTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       259 ~~~~~d~vid~~g~~----~~~~~~~~~l~~~G~~v~~  292 (372)
                      ....+|+|+-....+    ..+..+.+.|+++|.++..
T Consensus       140 ~~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  177 (227)
T 1g8a_A          140 LVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccCCceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence            134799999654433    2277788999999998876

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=95.18  E-value=0.07  Score=48.33  Aligned_cols=87  Identities=17%  Similarity=0.223  Sum_probs=61.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .|.+|.|+|.|.+|..+++.++.+|. .|++.+++.++ +....+|+..        .++.+.+        ...|+|+.
T Consensus       149 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~--------~~l~~~l--------~~aDvVil  210 (334)
T 2dbq_A          149 YGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTRKE-EVERELNAEF--------KPLEDLL--------RESDFVVL  210 (334)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHHCCEE--------CCHHHHH--------HHCSEEEE
T ss_pred             CCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCcch-hhHhhcCccc--------CCHHHHH--------hhCCEEEE
Confidence            56789999999999999999999998 68888888776 5566667521        1222222        25788888


Q ss_pred             CCCcHHH----H-HHHHHHhccCCEEEEEc
Q 017426          269 CAGLNKT----M-STALGATCAGGKVCLVG  293 (372)
Q Consensus       269 ~~g~~~~----~-~~~~~~l~~~G~~v~~g  293 (372)
                      ++.....    + ...+..|+++..++.++
T Consensus       211 ~vp~~~~t~~~i~~~~~~~mk~~ailIn~s  240 (334)
T 2dbq_A          211 AVPLTRETYHLINEERLKLMKKTAILINIA  240 (334)
T ss_dssp             CCCCCTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred             CCCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence            8765421    1 24567788877777665

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=95.16  E-value=0.051  Score=47.10  Aligned_cols=98  Identities=12%  Similarity=0.029  Sum_probs=61.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH-hCC--------------------CeEEecCCC
Q 017426          186 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGA--------------------DNIVKVSTN  244 (372)
Q Consensus       186 ~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~-lg~--------------------~~v~~~~~~  244 (372)
                      ..+++.+||..|+|. |..+..|++. |+ .|++++.++.-.+.+++ .+.                    ..+..... 
T Consensus        65 ~~~~~~~vLD~GCG~-G~~~~~La~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-  140 (252)
T 2gb4_A           65 KGQSGLRVFFPLCGK-AIEMKWFADR-GH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCC-  140 (252)
T ss_dssp             TTCCSCEEEETTCTT-CTHHHHHHHT-TC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEES-
T ss_pred             cCCCCCeEEEeCCCC-cHHHHHHHHC-CC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEEC-
Confidence            346789999999864 6777777765 88 79999999998888754 321                    11111111 


Q ss_pred             cccHHHHHHHHHHHcCCcceEEEeCC-----Cc---HHHHHHHHHHhccCCEEEEEc
Q 017426          245 LQDIAEEVEKIQKAMGTGIDVSFDCA-----GL---NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~d~vid~~-----g~---~~~~~~~~~~l~~~G~~v~~g  293 (372)
                        |+    .++.....+.||+|++..     ..   ...+..+.+.|+|+|+++.+.
T Consensus       141 --D~----~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~  191 (252)
T 2gb4_A          141 --SI----FDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV  191 (252)
T ss_dssp             --CT----TTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             --cc----ccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence              11    111111126899999742     11   135667888999999986543

>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*

Probab=95.16  E-value=0.14  Score=46.13  Aligned_cols=98  Identities=17%  Similarity=0.171  Sum_probs=64.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC--------CeEEecCCCcccHHHHHHHHHHHc
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA--------DNIVKVSTNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~--------~~v~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      .++.+||+.|+|. |..+..+++..+...+++++.+++..+.+++.-.        +.+...   ..|..+.+..    .
T Consensus       115 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~---~~D~~~~l~~----~  186 (321)
T 2pt6_A          115 KEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVF---IEDASKFLEN----V  186 (321)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEE---ESCHHHHHHH----C
T ss_pred             CCCCEEEEEcCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEE---EccHHHHHhh----c
Confidence            4568999998653 6667777776655689999999999888876421        111111   1233332221    2


Q ss_pred             CCcceEEEeCCC----------cHHHHHHHHHHhccCCEEEEEc
Q 017426          260 GTGIDVSFDCAG----------LNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       260 ~~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      .+.||+|+-...          ....++.+.+.|+++|.++...
T Consensus       187 ~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  230 (321)
T 2pt6_A          187 TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC  230 (321)
T ss_dssp             CSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            467999984221          1356788899999999998753

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=95.15  E-value=0.059  Score=46.50  Aligned_cols=90  Identities=24%  Similarity=0.328  Sum_probs=55.6

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccH--HHHHHHHHHHcCCcceEEE
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI--AEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~d~vi  267 (372)
                      .++||+|+ |.+|.++++.+...|+ .|+++++++++.+.      .  +     .-|+  .+.++++.+...+++|++|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~------~--~-----~~Dl~~~~~v~~~~~~~~~~id~lv   67 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAEVIA------D--L-----STAEGRKQAIADVLAKCSKGMDGLV   67 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------C--T-----TSHHHHHHHHHHHHTTCTTCCSEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhhcc------c--c-----ccCCCCHHHHHHHHHHhCCCCCEEE
Confidence            36899998 9999999999999999 57777776543211      0  1     1121  1234444321125789999


Q ss_pred             eCCCcHH------------------HHHHHHHHhccC--CEEEEEcC
Q 017426          268 DCAGLNK------------------TMSTALGATCAG--GKVCLVGM  294 (372)
Q Consensus       268 d~~g~~~------------------~~~~~~~~l~~~--G~~v~~g~  294 (372)
                      ++.|...                  ..+.+++.|...  |+++.++.
T Consensus        68 ~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS  114 (257)
T 1fjh_A           68 LCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISS  114 (257)
T ss_dssp             ECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECC
T ss_pred             ECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECC
Confidence            9887431                  123345555433  89988864

>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31

Probab=95.15  E-value=0.12  Score=48.42  Aligned_cols=107  Identities=16%  Similarity=0.167  Sum_probs=68.9

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-----------HHhC--CCeEEec--CCC
Q 017426          180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-----------KEIG--ADNIVKV--STN  244 (372)
Q Consensus       180 ~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-----------~~lg--~~~v~~~--~~~  244 (372)
                      .+++...++++++||=+|+| .|..++.+++..|...|++++.++...+.+           +.+|  ...+...  +..
T Consensus       233 ~ml~~l~l~~g~~VLDLGCG-sG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~  311 (433)
T 1u2z_A          233 DVYQQCQLKKGDTFMDLGSG-VGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSF  311 (433)
T ss_dssp             HHHHHTTCCTTCEEEEESCT-TSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCS
T ss_pred             HHHHhcCCCCCCEEEEeCCC-cCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcc
Confidence            44566788899999999986 488888999888876899999999865544           3456  2333221  111


Q ss_pred             cccHHHHHHHHHHHcCCcceEEEe--CCCcH---HHHHHHHHHhccCCEEEEEc
Q 017426          245 LQDIAEEVEKIQKAMGTGIDVSFD--CAGLN---KTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~d~vid--~~g~~---~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ...+  .+...    ...||+|+-  +...+   ..+..+.+.|+++|+++...
T Consensus       312 ~~~~--~~~~~----~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d  359 (433)
T 1u2z_A          312 VDNN--RVAEL----IPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  359 (433)
T ss_dssp             TTCH--HHHHH----GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             cccc--ccccc----cCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEee
Confidence            1111  11111    257999995  22223   23457778899999998874

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=95.14  E-value=0.019  Score=49.50  Aligned_cols=76  Identities=20%  Similarity=0.245  Sum_probs=47.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCc-ccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .+.++||+|+ |.+|.++++.+...|+ .|+++++++++.+.+.  +    +..|-.+ ++..+.+.+..+. .+++|++
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~--~----~~~D~~~~~~~~~~~~~~~~~-~g~id~l   85 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF--G----VEVDVTDSDAVDRAFTAVEEH-QGPVEVL   85 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE--E----EECCTTCHHHHHHHHHHHHHH-HSSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHhc--C----eeccCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            4678999987 9999999999999998 5777777655432111  1    2222222 2333334333322 3579999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      |++.|.
T Consensus        86 v~~Ag~   91 (247)
T 1uzm_A           86 VSNAGL   91 (247)
T ss_dssp             EEECSC
T ss_pred             EECCCC
Confidence            998774

>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5

Probab=95.12  E-value=0.32  Score=43.99  Aligned_cols=135  Identities=16%  Similarity=0.129  Sum_probs=80.8

Q ss_pred             CCCCC--EEEEECCC-HHHHHHHHHHHHc--CCCeEEEEecChhHHH-HHHHhCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017426          187 IGPET--NVLIMGAG-PIGLVTMLAARAF--GAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG  260 (372)
Q Consensus       187 ~~~g~--~vlI~Gag-~~G~~ai~l~~~~--g~~~vv~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~  260 (372)
                      .++.+  +|.|+|+| .+|...+..++..  +++.+.++++++++.+ +++++|...+.      .++.+    +.+  .
T Consensus        13 ~~~~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~------~~~~~----ll~--~   80 (340)
T 1zh8_A           13 MKPLRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF------DSYEE----LLE--S   80 (340)
T ss_dssp             ---CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE------SCHHH----HHH--S
T ss_pred             cCCCCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCccc------CCHHH----Hhc--C
Confidence            34444  67888998 7898777776665  5655566677777765 45678864432      23333    332  3


Q ss_pred             CcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCcccc-chh----hhccCcEE-Eee-ccCCCcHHHHHHHHHcC
Q 017426          261 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP-LTP----AAVREVDV-VGV-FRYKNTWPLCLELLRSG  333 (372)
Q Consensus       261 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~----~~~~~~~i-~~~-~~~~~~~~~~~~ll~~g  333 (372)
                      ..+|+|+.|+....+.+.+..+|.. |+.+.+.-. ...+.. ...    .-.+++.+ .+. ..+...++.+.+++++|
T Consensus        81 ~~vD~V~i~tp~~~H~~~~~~al~a-GkhVl~EKP-la~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~g  158 (340)
T 1zh8_A           81 GLVDAVDLTLPVELNLPFIEKALRK-GVHVICEKP-ISTDVETGKKVVELSEKSEKTVYIAENFRHVPAFWKAKELVESG  158 (340)
T ss_dssp             SCCSEEEECCCGGGHHHHHHHHHHT-TCEEEEESS-SSSSHHHHHHHHHHHHHCSSCEEEECGGGGCHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCchHHHHHHHHHHHC-CCcEEEeCC-CCCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhcC
Confidence            5799999999987777788888874 566666421 111111 111    11223222 222 23366788888999998


Q ss_pred             CC
Q 017426          334 KI  335 (372)
Q Consensus       334 ~~  335 (372)
                      .+
T Consensus       159 ~i  160 (340)
T 1zh8_A          159 AI  160 (340)
T ss_dssp             TT
T ss_pred             CC
Confidence            87

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=95.10  E-value=0.16  Score=45.66  Aligned_cols=80  Identities=25%  Similarity=0.303  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEec---------ChhHHH-H---HHHhCCCeEEecCCCcccHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV---------DDYRLS-V---AKEIGADNIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~---------~~~~~~-~---~~~lg~~~v~~~~~~~~~~~~~~~~  254 (372)
                      .|.++||+|+ |++|.++++.+...|+ .|+++++         +.++.+ .   ++..+.....++.+ ..+..+.+.+
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~-~~~~~~~~~~   85 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS-VEAGEKLVKT   85 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC-GGGHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCC-HHHHHHHHHH
Confidence            4678999987 9999999999999999 5666532         344332 2   22334333444432 2334444444


Q ss_pred             HHHHcCCcceEEEeCCC
Q 017426          255 IQKAMGTGIDVSFDCAG  271 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g  271 (372)
                      +.+. .+++|++|++.|
T Consensus        86 ~~~~-~g~iD~lVnnAG  101 (319)
T 1gz6_A           86 ALDT-FGRIDVVVNNAG  101 (319)
T ss_dssp             HHHH-TSCCCEEEECCC
T ss_pred             HHHH-cCCCCEEEECCC
Confidence            4332 468999999887

>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*

Probab=95.09  E-value=0.18  Score=42.99  Aligned_cols=103  Identities=18%  Similarity=0.198  Sum_probs=67.5

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHH
Q 017426          181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       181 ~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~  256 (372)
                      .++..+++++.+||-.|+|. |..+..+++.. . .+++++.+++..+.+++    .+...+........++.     + 
T Consensus        13 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~-~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-   83 (239)
T 1xxl_A           13 MIKTAECRAEHRVLDIGAGA-GHTALAFSPYV-Q-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-----F-   83 (239)
T ss_dssp             HHHHHTCCTTCEEEEESCTT-SHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-----S-
T ss_pred             HHHHhCcCCCCEEEEEccCc-CHHHHHHHHhC-C-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC-----C-
Confidence            44667789999999999865 77777777654 4 79999999988776654    34332211111111110     0 


Q ss_pred             HHcCCcceEEEeCCCc------HHHHHHHHHHhccCCEEEEEcC
Q 017426          257 KAMGTGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                        ..+.||+|+....-      ...+..+.+.|+++|.++....
T Consensus        84 --~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~  125 (239)
T 1xxl_A           84 --PDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDH  125 (239)
T ss_dssp             --CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             --CCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEc
Confidence              13679999865321      3467788999999999988753

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=95.08  E-value=0.13  Score=43.28  Aligned_cols=103  Identities=17%  Similarity=0.190  Sum_probs=66.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHH----hCCCe-EEecCCCcccHHHHHHHHHHHc-
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGADN-IVKVSTNLQDIAEEVEKIQKAM-  259 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~-v~~~~~~~~~~~~~~~~~~~~~-  259 (372)
                      ..++.+||-+|+|. |..++.+++.++ ...|++++.+++..+.+++    .|... +....   .+..+.+..+.... 
T Consensus        62 ~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~~~~~~  137 (225)
T 3tr6_A           62 LMQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRL---SPAKDTLAELIHAGQ  137 (225)
T ss_dssp             HHTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHHHHTTTC
T ss_pred             hhCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe---CCHHHHHHHhhhccC
Confidence            35678999998764 788888888764 4479999999988777654    35432 22111   23333333332100 


Q ss_pred             CCcceEEEeCCCc---HHHHHHHHHHhccCCEEEEEc
Q 017426          260 GTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       260 ~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      .+.||+||-....   ...+..+.+.|+++|.++.-.
T Consensus       138 ~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  174 (225)
T 3tr6_A          138 AWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDN  174 (225)
T ss_dssp             TTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            1689999843332   245778889999999988754

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=95.07  E-value=0.13  Score=49.35  Aligned_cols=81  Identities=22%  Similarity=0.283  Sum_probs=52.4

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhH----HHH---HHHhCCCe-EEecCCCcccHHHHHHHHHH
Q 017426          187 IGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR----LSV---AKEIGADN-IVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       187 ~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~----~~~---~~~lg~~~-v~~~~~~~~~~~~~~~~~~~  257 (372)
                      ++++.++||+|+ |.+|..+++.+...|+++++.+.++...    .++   ++..|... ++..|-.+   .+.+.++.+
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd---~~~v~~~~~  332 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAE---RDALAALVT  332 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSC---HHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCC---HHHHHHHHh
Confidence            467889999987 9999999998888999767777776531    222   33345432 22222222   223444443


Q ss_pred             HcCCcceEEEeCCCc
Q 017426          258 AMGTGIDVSFDCAGL  272 (372)
Q Consensus       258 ~~~~~~d~vid~~g~  272 (372)
                      .  +++|+||++.|.
T Consensus       333 ~--~~ld~VVh~AGv  345 (511)
T 2z5l_A          333 A--YPPNAVFHTAGI  345 (511)
T ss_dssp             H--SCCSEEEECCCC
T ss_pred             c--CCCcEEEECCcc
Confidence            2  679999998874

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=95.04  E-value=0.062  Score=48.65  Aligned_cols=89  Identities=19%  Similarity=0.192  Sum_probs=64.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .|.+|.|+|.|.+|..+++.++.+|. .|++.+++.++ +.+..+|+..    .    +    +.++.    ...|+|+.
T Consensus       164 ~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~----~----~----l~ell----~~aDvV~l  225 (335)
T 2g76_A          164 NGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISP-EVSASFGVQQ----L----P----LEEIW----PLCDFITV  225 (335)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCH-HHHHHTTCEE----C----C----HHHHG----GGCSEEEE
T ss_pred             CcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCcee----C----C----HHHHH----hcCCEEEE
Confidence            57899999999999999999999998 58888877655 3556777642    1    2    22222    46899998


Q ss_pred             CCCcHHH----H-HHHHHHhccCCEEEEEcCC
Q 017426          269 CAGLNKT----M-STALGATCAGGKVCLVGMG  295 (372)
Q Consensus       269 ~~g~~~~----~-~~~~~~l~~~G~~v~~g~~  295 (372)
                      ++.....    + ...+..|+++..++.++..
T Consensus       226 ~~P~t~~t~~li~~~~l~~mk~gailIN~arg  257 (335)
T 2g76_A          226 HTPLLPSTTGLLNDNTFAQCKKGVRVVNCARG  257 (335)
T ss_dssp             CCCCCTTTTTSBCHHHHTTSCTTEEEEECSCT
T ss_pred             ecCCCHHHHHhhCHHHHhhCCCCcEEEECCCc
Confidence            8765421    1 3467788888888887653

>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38

Probab=95.03  E-value=0.2  Score=44.85  Aligned_cols=102  Identities=24%  Similarity=0.290  Sum_probs=65.5

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHH
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      ....+++|++||=.|+|. |..+.++++..+ ...|++++.++++.+.+++    +|...+........++..       
T Consensus       112 ~~l~~~~g~~VLDlg~G~-G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~-------  183 (315)
T 1ixk_A          112 VALDPKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE-------  183 (315)
T ss_dssp             HHHCCCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG-------
T ss_pred             HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc-------
Confidence            445678999998887643 566667777653 2479999999998777654    465433322222122111       


Q ss_pred             HcCCcceEEEe---CCCc-------------------------HHHHHHHHHHhccCCEEEEEc
Q 017426          258 AMGTGIDVSFD---CAGL-------------------------NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       258 ~~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~g  293 (372)
                       ....||.|+-   |.|.                         ...+..+.+.|+++|+++...
T Consensus       184 -~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~st  246 (315)
T 1ixk_A          184 -LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYST  246 (315)
T ss_dssp             -GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Confidence             1357999984   3221                         245677888999999988753

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=95.01  E-value=0.026  Score=47.90  Aligned_cols=95  Identities=17%  Similarity=0.206  Sum_probs=66.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC-CeEEecCCCcccHHHHHHHHHHHc-CCcce
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA-DNIVKVSTNLQDIAEEVEKIQKAM-GTGID  264 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~~~~~~~~~-~~~~d  264 (372)
                      ++++.+||-.|+|. |..+..+++. |. .|++++.++...+.+++... ..++..+.. ..+.     +   . .+.||
T Consensus        46 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~-~~~~-----~---~~~~~fD  113 (226)
T 3m33_A           46 LTPQTRVLEAGCGH-GPDAARFGPQ-AA-RWAAYDFSPELLKLARANAPHADVYEWNGK-GELP-----A---GLGAPFG  113 (226)
T ss_dssp             CCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHCTTSEEEECCSC-SSCC-----T---TCCCCEE
T ss_pred             CCCCCeEEEeCCCC-CHHHHHHHHc-CC-EEEEEECCHHHHHHHHHhCCCceEEEcchh-hccC-----C---cCCCCEE
Confidence            36789999999854 6777777776 66 79999999999888877532 222221110 1110     0   1 35799


Q ss_pred             EEEeCCCcHHHHHHHHHHhccCCEEEEEc
Q 017426          265 VSFDCAGLNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       265 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      +|+....-...+..+.+.|+|+|.++..+
T Consensus       114 ~v~~~~~~~~~l~~~~~~LkpgG~l~~~~  142 (226)
T 3m33_A          114 LIVSRRGPTSVILRLPELAAPDAHFLYVG  142 (226)
T ss_dssp             EEEEESCCSGGGGGHHHHEEEEEEEEEEE
T ss_pred             EEEeCCCHHHHHHHHHHHcCCCcEEEEeC
Confidence            99987655567888999999999998443

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=95.00  E-value=0.25  Score=43.49  Aligned_cols=41  Identities=27%  Similarity=0.433  Sum_probs=35.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH
Q 017426          191 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE  232 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~  232 (372)
                      .+|.|+|+|.+|..+++.+...|. .|++.++++++.+.+.+
T Consensus         5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHH
Confidence            589999999999999999999999 68889999988776554

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=94.99  E-value=0.16  Score=47.29  Aligned_cols=86  Identities=19%  Similarity=0.076  Sum_probs=51.2

Q ss_pred             cCCCCCCEEEEECC-CHHHHH--HHHHHHHcCCCeEEEEecChh---------------H-HHHHHHhCCCe-EEecCCC
Q 017426          185 ANIGPETNVLIMGA-GPIGLV--TMLAARAFGAPRIVIVDVDDY---------------R-LSVAKEIGADN-IVKVSTN  244 (372)
Q Consensus       185 ~~~~~g~~vlI~Ga-g~~G~~--ai~l~~~~g~~~vv~v~~~~~---------------~-~~~~~~lg~~~-v~~~~~~  244 (372)
                      .....|.++||+|+ +++|.+  .+..+...|+ .|+++.++..               . .+.+++.|... .+..|-.
T Consensus        55 ~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvt  133 (418)
T 4eue_A           55 IGFRGPKKVLIVGASSGFGLATRISVAFGGPEA-HTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAF  133 (418)
T ss_dssp             CCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCC-EEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCC-EEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCC
Confidence            44577889999997 999998  5555555698 5666655421               1 22345556433 2233332


Q ss_pred             cc-cHHHHHHHHHHHcCCcceEEEeCCCc
Q 017426          245 LQ-DIAEEVEKIQKAMGTGIDVSFDCAGL  272 (372)
Q Consensus       245 ~~-~~~~~~~~~~~~~~~~~d~vid~~g~  272 (372)
                      +. +..+.+.++.+ ..+++|+++++.|.
T Consensus       134 d~~~v~~~v~~i~~-~~G~IDiLVnNAG~  161 (418)
T 4eue_A          134 SNETKDKVIKYIKD-EFGKIDLFVYSLAA  161 (418)
T ss_dssp             CHHHHHHHHHHHHH-TTCCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHH-HcCCCCEEEECCcc
Confidence            22 33334444433 34689999998875

>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*

Probab=94.98  E-value=0.16  Score=45.46  Aligned_cols=98  Identities=21%  Similarity=0.194  Sum_probs=63.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC---------CCeEEecCCCcccHHHHHHHHHHH
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG---------ADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg---------~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      .++.+||++|+|. |..+..+++..+...+++++.+++-.+.+++.-         ...+...   ..|..+.+..    
T Consensus        76 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~---~~D~~~~l~~----  147 (314)
T 1uir_A           76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLV---IDDARAYLER----  147 (314)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEE---ESCHHHHHHH----
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEE---EchHHHHHHh----
Confidence            4568999998753 566777777665568999999999888776521         1112111   1233322221    


Q ss_pred             cCCcceEEEeCC-------C------cHHHHHHHHHHhccCCEEEEEc
Q 017426          259 MGTGIDVSFDCA-------G------LNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       259 ~~~~~d~vid~~-------g------~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ..+.+|+|+-..       +      ....++.+.+.|+++|.++...
T Consensus       148 ~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  195 (314)
T 1uir_A          148 TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT  195 (314)
T ss_dssp             CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence            256799998422       1      1356788999999999998763

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=94.96  E-value=0.052  Score=48.14  Aligned_cols=92  Identities=21%  Similarity=0.233  Sum_probs=54.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh-------hHHHHHH---HhCCCeEEecCCCcccHHHHHHHHHHH
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD-------YRLSVAK---EIGADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~-------~~~~~~~---~lg~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      +.+|||+|+ |.+|..+++.+...|.+ |+++.+++       ++.+.++   ..++.. +..|-.+   .+.+.+..  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~-v~~D~~d---~~~l~~~~--   74 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNP-TYALVRKTITAANPETKEELIDNYQSLGVIL-LEGDIND---HETLVKAI--   74 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCC-EEEEECCSCCSSCHHHHHHHHHHHHHTTCEE-EECCTTC---HHHHHHHH--
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCc-EEEEECCCcccCChHHHHHHHHHHHhCCCEE-EEeCCCC---HHHHHHHH--
Confidence            457999998 99999999988888985 56666665       4444333   235432 3222222   23344443  


Q ss_pred             cCCcceEEEeCCCcH--HHHHHHHHHhccC---CEEE
Q 017426          259 MGTGIDVSFDCAGLN--KTMSTALGATCAG---GKVC  290 (372)
Q Consensus       259 ~~~~~d~vid~~g~~--~~~~~~~~~l~~~---G~~v  290 (372)
                        .++|+||.+.+..  .....+++.+...   .+++
T Consensus        75 --~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           75 --KQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             --TTCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             --hCCCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence              4699999988742  1223444444432   4665

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=94.96  E-value=0.13  Score=44.17  Aligned_cols=97  Identities=14%  Similarity=0.205  Sum_probs=67.5

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCC---eEEecCCCcccHHHHHHHHHH
Q 017426          185 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD---NIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       185 ~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      ..++++.+||-.|+|. |..+..+++..+. .+++++.+++..+.+++    .|..   .++..+.  .++.        
T Consensus        42 ~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~--~~~~--------  109 (257)
T 3f4k_A           42 NELTDDAKIADIGCGT-GGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSM--DNLP--------  109 (257)
T ss_dssp             CCCCTTCEEEEETCTT-SHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT--TSCS--------
T ss_pred             hcCCCCCeEEEeCCCC-CHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh--hhCC--------
Confidence            4678899999999874 8888899988876 79999999988776654    3432   1222111  1110        


Q ss_pred             HcCCcceEEEe-----CCCcHHHHHHHHHHhccCCEEEEEc
Q 017426          258 AMGTGIDVSFD-----CAGLNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       258 ~~~~~~d~vid-----~~g~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ...+.+|+|+.     ..+-...+..+.+.|+|+|.++...
T Consensus       110 ~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~  150 (257)
T 3f4k_A          110 FQNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE  150 (257)
T ss_dssp             SCTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             CCCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence            01367999974     2333457788888999999998765

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=94.95  E-value=0.11  Score=44.11  Aligned_cols=73  Identities=22%  Similarity=0.323  Sum_probs=46.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCc-ccHHHHHHHHHHHcCCcceEEE
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      +.++||+|+ |.+|..+++.+...|+ .|++++++++ .   ++   ...+..|-.+ +++.+.+.+. +. .+++|++|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~-~---~~---~~~~~~D~~~~~~~~~~~~~~-~~-~~~~d~li   71 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRRE-G---ED---LIYVEGDVTREEDVRRAVARA-QE-EAPLFAVV   71 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCC-S---SS---SEEEECCTTCHHHHHHHHHHH-HH-HSCEEEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEccCcc-c---cc---eEEEeCCCCCHHHHHHHHHHH-Hh-hCCceEEE
Confidence            568999998 9999999998888898 5777767654 1   11   1233333222 2333444443 21 25899999


Q ss_pred             eCCCc
Q 017426          268 DCAGL  272 (372)
Q Consensus       268 d~~g~  272 (372)
                      ++.|.
T Consensus        72 ~~ag~   76 (242)
T 1uay_A           72 SAAGV   76 (242)
T ss_dssp             ECCCC
T ss_pred             Ecccc
Confidence            98763

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=94.94  E-value=0.064  Score=46.80  Aligned_cols=76  Identities=21%  Similarity=0.186  Sum_probs=47.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcc-cHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ-DIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|++++++.++.+..      ..+..+-.+. +..+.+.++.+ ..+++|++
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~------~~~~~Dv~~~~~~~~~~~~~~~-~~g~iD~l   98 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAGIAAD------LHLPGDLREAAYADGLPGAVAA-GLGRLDIV   98 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTTSCCS------EECCCCTTSHHHHHHHHHHHHH-HHSCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHhh------hccCcCCCCHHHHHHHHHHHHH-hcCCCCEE
Confidence            4678999987 9999999999999999 577777765443211      1111121112 22222333322 13589999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      |++.|.
T Consensus        99 vnnAg~  104 (266)
T 3uxy_A           99 VNNAGV  104 (266)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            998874

>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}

Probab=94.90  E-value=0.38  Score=42.46  Aligned_cols=102  Identities=18%  Similarity=0.195  Sum_probs=65.8

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEecChhHHHHHHHh-----C-CCe--EEecCCCcccHHHHHHHHHH
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEI-----G-ADN--IVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~~~~~l-----g-~~~--v~~~~~~~~~~~~~~~~~~~  257 (372)
                      .+++.+||=+|+| .|..+..+++.. ....|++++.++...+.+++.     + ...  ++..+....++... ..+  
T Consensus        34 ~~~~~~vLDiGcG-~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~~~--  109 (299)
T 3g5t_A           34 DGERKLLVDVGCG-PGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGA-DSV--  109 (299)
T ss_dssp             CSCCSEEEEETCT-TTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCT-TTT--
T ss_pred             cCCCCEEEEECCC-CCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCcccc-ccc--
Confidence            3688999999986 488899999875 555899999999988877663     1 122  22211111111000 000  


Q ss_pred             HcCCcceEEEeCCC-----cHHHHHHHHHHhccCCEEEEEc
Q 017426          258 AMGTGIDVSFDCAG-----LNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       258 ~~~~~~d~vid~~g-----~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                       ..+.+|+|+....     -...+..+.+.|+++|.++.+.
T Consensus       110 -~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~~  149 (299)
T 3g5t_A          110 -DKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAIWG  149 (299)
T ss_dssp             -TSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -cCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEEe
Confidence             0167999986432     2457788999999999998754

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=94.89  E-value=0.057  Score=50.90  Aligned_cols=103  Identities=16%  Similarity=0.174  Sum_probs=68.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHH-cCC--CeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcc
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARA-FGA--PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~-~g~--~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      +....+|||+|+|++|+.++.++.. .+.  ..+++++..+.+.+..+.+|.. +....-...+..+.+.++.   .++ 
T Consensus        10 ~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~-~~~~~Vdadnv~~~l~aLl---~~~-   84 (480)
T 2ph5_A           10 ILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVS-FKLQQITPQNYLEVIGSTL---EEN-   84 (480)
T ss_dssp             BCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCE-EEECCCCTTTHHHHTGGGC---CTT-
T ss_pred             ecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCc-eeEEeccchhHHHHHHHHh---cCC-
Confidence            4556789999999999999988865 444  2577777776666667777753 3322222344444444443   234 


Q ss_pred             eEEEeCCCcHHHHHHHHHHhccCCEEEEEcC
Q 017426          264 DVSFDCAGLNKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       264 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      |+|++++-....+..+-.++..+=.++....
T Consensus        85 DvVIN~s~~~~~l~Im~acleaGv~YlDTa~  115 (480)
T 2ph5_A           85 DFLIDVSIGISSLALIILCNQKGALYINAAT  115 (480)
T ss_dssp             CEEEECCSSSCHHHHHHHHHHHTCEEEESSC
T ss_pred             CEEEECCccccCHHHHHHHHHcCCCEEECCC
Confidence            9999977555566677777787778887654

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=94.88  E-value=0.055  Score=49.32  Aligned_cols=89  Identities=18%  Similarity=0.139  Sum_probs=61.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .|.+|.|+|.|.+|..+++.++.+|+ .|++.+++. +.+.+...|+..+       .++.+    +.    ...|+|+-
T Consensus       159 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~~~~~g~~~~-------~~l~e----ll----~~aDiV~l  221 (352)
T 3gg9_A          159 KGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGREN-SKERARADGFAVA-------ESKDA----LF----EQSDVLSV  221 (352)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSHH-HHHHHHHTTCEEC-------SSHHH----HH----HHCSEEEE
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECCCC-CHHHHHhcCceEe-------CCHHH----HH----hhCCEEEE
Confidence            47789999999999999999999999 688887764 3455566776421       12222    22    25788888


Q ss_pred             CCCcHHH-----HHHHHHHhccCCEEEEEcC
Q 017426          269 CAGLNKT-----MSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       269 ~~g~~~~-----~~~~~~~l~~~G~~v~~g~  294 (372)
                      ++.....     -...+..|+++..++.++.
T Consensus       222 ~~Plt~~t~~li~~~~l~~mk~gailIN~aR  252 (352)
T 3gg9_A          222 HLRLNDETRSIITVADLTRMKPTALFVNTSR  252 (352)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             eccCcHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            7653211     1246677888888888763

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=94.86  E-value=0.17  Score=43.92  Aligned_cols=101  Identities=16%  Similarity=0.172  Sum_probs=67.1

Q ss_pred             HHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCC---eEEecCCCcccHHHHH
Q 017426          181 ACRRA-NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD---NIVKVSTNLQDIAEEV  252 (372)
Q Consensus       181 ~l~~~-~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~~  252 (372)
                      .+... .++++.+||-+|+|. |..+..+++. +...+++++.+++..+.+++    .|..   .++..+.  .++.   
T Consensus        37 ~l~~l~~~~~~~~vLDiGcG~-G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~--~~~~---  109 (267)
T 3kkz_A           37 ALSFIDNLTEKSLIADIGCGT-GGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSM--DDLP---  109 (267)
T ss_dssp             HHTTCCCCCTTCEEEEETCTT-CHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT--TSCC---
T ss_pred             HHHhcccCCCCCEEEEeCCCC-CHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcCh--hhCC---
Confidence            34443 478999999999864 7888888887 44479999999987776654    3432   1222111  1110   


Q ss_pred             HHHHHHcCCcceEEEeC-----CCcHHHHHHHHHHhccCCEEEEEc
Q 017426          253 EKIQKAMGTGIDVSFDC-----AGLNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       253 ~~~~~~~~~~~d~vid~-----~g~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                        +   ..+.+|+|+..     .+-...+..+.+.|+|+|.++...
T Consensus       110 --~---~~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  150 (267)
T 3kkz_A          110 --F---RNEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSE  150 (267)
T ss_dssp             --C---CTTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             --C---CCCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEE
Confidence              0   13679999853     333456778888999999998765

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=94.85  E-value=0.21  Score=44.52  Aligned_cols=89  Identities=15%  Similarity=0.147  Sum_probs=60.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      ..+|.|+|.|.+|...++.+...|. .|++.++++++.+.+.+.|+...       .+..+.+        ...|+||-+
T Consensus         9 ~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~e~~--------~~aDvVi~~   72 (306)
T 3l6d_A            9 EFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAAGAHLC-------ESVKAAL--------SASPATIFV   72 (306)
T ss_dssp             SCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTCEEC-------SSHHHHH--------HHSSEEEEC
T ss_pred             CCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeec-------CCHHHHH--------hcCCEEEEE
Confidence            4579999999999999999999998 47888999999888877775321       1222222        246888888


Q ss_pred             CCcHHHHHHHH-----HHhccCCEEEEEcC
Q 017426          270 AGLNKTMSTAL-----GATCAGGKVCLVGM  294 (372)
Q Consensus       270 ~g~~~~~~~~~-----~~l~~~G~~v~~g~  294 (372)
                      +..+......+     ..+.++..++.++.
T Consensus        73 vp~~~~~~~v~~~~~l~~~~~g~ivid~st  102 (306)
T 3l6d_A           73 LLDNHATHEVLGMPGVARALAHRTIVDYTT  102 (306)
T ss_dssp             CSSHHHHHHHHTSTTHHHHTTTCEEEECCC
T ss_pred             eCCHHHHHHHhcccchhhccCCCEEEECCC
Confidence            88664444433     23445555655543

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=94.85  E-value=0.086  Score=50.93  Aligned_cols=83  Identities=13%  Similarity=0.139  Sum_probs=52.3

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE-ecCh-----------------hHHHHHHHhCCCeE-EecCCCcc
Q 017426          187 IGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIV-DVDD-----------------YRLSVAKEIGADNI-VKVSTNLQ  246 (372)
Q Consensus       187 ~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v-~~~~-----------------~~~~~~~~lg~~~v-~~~~~~~~  246 (372)
                      ++++.++||+|+ |++|..+++.+...|+++++.+ .++.                 +..+.+++.|.... +..|-.+.
T Consensus       248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~  327 (525)
T 3qp9_A          248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDA  327 (525)
T ss_dssp             SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSH
T ss_pred             ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCH
Confidence            567889999987 9999999988888899767777 6662                 12233444565332 22232222


Q ss_pred             cHHHHHHHHHHH--cCCcceEEEeCCCc
Q 017426          247 DIAEEVEKIQKA--MGTGIDVSFDCAGL  272 (372)
Q Consensus       247 ~~~~~~~~~~~~--~~~~~d~vid~~g~  272 (372)
                         +.+.++.+.  ..+++|+||++.|.
T Consensus       328 ---~~v~~~~~~i~~~g~id~vVh~AGv  352 (525)
T 3qp9_A          328 ---EAAARLLAGVSDAHPLSAVLHLPPT  352 (525)
T ss_dssp             ---HHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred             ---HHHHHHHHHHHhcCCCcEEEECCcC
Confidence               223333221  23579999998874

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=94.83  E-value=0.039  Score=51.07  Aligned_cols=90  Identities=20%  Similarity=0.154  Sum_probs=60.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .|.++.|+|.|.+|+.+++.++.+|. .|++.+++.++.+..+++|+...       .++    .++.    ...|+|+.
T Consensus       190 ~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~~~~~~G~~~~-------~~l----~ell----~~aDvV~l  253 (393)
T 2nac_A          190 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH-------ATR----EDMY----PVCDVVTL  253 (393)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC-------SSH----HHHG----GGCSEEEE
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcCCccchhhHhhcCceec-------CCH----HHHH----hcCCEEEE
Confidence            57899999999999999999999998 58888877655666667775421       112    2221    35788887


Q ss_pred             CCCcHH----HH-HHHHHHhccCCEEEEEcC
Q 017426          269 CAGLNK----TM-STALGATCAGGKVCLVGM  294 (372)
Q Consensus       269 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~  294 (372)
                      ++....    .+ ...+..|+++..++.++.
T Consensus       254 ~~Plt~~t~~li~~~~l~~mk~gailIN~aR  284 (393)
T 2nac_A          254 NCPLHPETEHMINDETLKLFKRGAYIVNTAR  284 (393)
T ss_dssp             CSCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             ecCCchHHHHHhhHHHHhhCCCCCEEEECCC
Confidence            765321    11 245566777666666553

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=94.82  E-value=0.1  Score=46.30  Aligned_cols=92  Identities=20%  Similarity=0.262  Sum_probs=55.7

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecC-----hhHHHHHHHh---CCCeEEecCCCcccHHHHHHHHHHHcC
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD-----DYRLSVAKEI---GADNIVKVSTNLQDIAEEVEKIQKAMG  260 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~-----~~~~~~~~~l---g~~~v~~~~~~~~~~~~~~~~~~~~~~  260 (372)
                      ..+|||+|+ |.+|..+++.+...|.+ |+++.++     +++.+.++.+   ++. ++..|-.  + .+.+.+..    
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~--d-~~~l~~~~----   74 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHP-TYVLFRPEVVSNIDKVQMLLYFKQLGAK-LIEASLD--D-HQRLVDAL----   74 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCC-EEEECCSCCSSCHHHHHHHHHHHTTTCE-EECCCSS--C-HHHHHHHH----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCc-EEEEECCCcccchhHHHHHHHHHhCCeE-EEeCCCC--C-HHHHHHHH----
Confidence            357999998 99999999999889985 6666666     4454444333   332 2222221  2 23344443    


Q ss_pred             CcceEEEeCCCcH------HHHHHHHHHhccCC---EEE
Q 017426          261 TGIDVSFDCAGLN------KTMSTALGATCAGG---KVC  290 (372)
Q Consensus       261 ~~~d~vid~~g~~------~~~~~~~~~l~~~G---~~v  290 (372)
                      .++|+||.+.+..      .....+++.+...|   +++
T Consensus        75 ~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v  113 (313)
T 1qyd_A           75 KQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFL  113 (313)
T ss_dssp             TTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred             hCCCEEEECCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence            4699999987742      12334555554444   666

>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A

Probab=94.82  E-value=0.17  Score=44.35  Aligned_cols=105  Identities=19%  Similarity=0.220  Sum_probs=64.3

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHHH
Q 017426          184 RANIGPETNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       184 ~~~~~~g~~vlI~Gag~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      ...+++|++||=.|+|. |..+.+++... +...|++++.++++.+.+++    +|...+....   .|..+....+. .
T Consensus        78 ~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~---~D~~~~~~~~~-~  152 (274)
T 3ajd_A           78 VLNPREDDFILDMCAAP-GGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIIN---ADMRKYKDYLL-K  152 (274)
T ss_dssp             HHCCCTTCEEEETTCTT-CHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE---SCHHHHHHHHH-H
T ss_pred             HhCCCCcCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEe---CChHhcchhhh-h
Confidence            34578899988877643 55666677664 43589999999998877654    4654332221   22222111111 0


Q ss_pred             cCCcceEEEe---CCCc---------------------HHHHHHHHHHhccCCEEEEEc
Q 017426          259 MGTGIDVSFD---CAGL---------------------NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       259 ~~~~~d~vid---~~g~---------------------~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ....||.|+-   |.|.                     ...+..+.+.|+++|+++...
T Consensus       153 ~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~st  211 (274)
T 3ajd_A          153 NEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYST  211 (274)
T ss_dssp             TTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence            1457999984   3331                     245677888999999988753

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=94.80  E-value=0.16  Score=48.59  Aligned_cols=84  Identities=19%  Similarity=0.251  Sum_probs=52.2

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhH----H---HHHHHhCCCe-EEecCCCcc-cHHHHHHHHH
Q 017426          187 IGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR----L---SVAKEIGADN-IVKVSTNLQ-DIAEEVEKIQ  256 (372)
Q Consensus       187 ~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~----~---~~~~~lg~~~-v~~~~~~~~-~~~~~~~~~~  256 (372)
                      ++++.++||+|+ |.+|..+++.+...|+++++.+.++...    .   +.++..|... ++..|-.+. ++.+.+..+ 
T Consensus       223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-  301 (486)
T 2fr1_A          223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-  301 (486)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-
Confidence            567889999987 9999999988888899767777776531    1   2234456432 222232222 222222222 


Q ss_pred             HHcCCcceEEEeCCCc
Q 017426          257 KAMGTGIDVSFDCAGL  272 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~  272 (372)
                      . ..+++|.||.+.|.
T Consensus       302 ~-~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          302 G-DDVPLSAVFHAAAT  316 (486)
T ss_dssp             C-TTSCEEEEEECCCC
T ss_pred             H-hcCCCcEEEECCcc
Confidence            1 13579999998873

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=94.80  E-value=0.19  Score=43.74  Aligned_cols=101  Identities=18%  Similarity=0.187  Sum_probs=64.2

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeE--EecCCCcccHHHHHHHHHHH
Q 017426          181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI--VKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       181 ~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v--~~~~~~~~~~~~~~~~~~~~  258 (372)
                      .+....++++.+||=+|+|. |..+..+++. |+ .|++++.+++..+.+++.-....  .+.........   .    .
T Consensus        37 il~~l~l~~g~~VLDlGcGt-G~~a~~La~~-g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~---~----~  106 (261)
T 3iv6_A           37 DIFLENIVPGSTVAVIGAST-RFLIEKALER-GA-SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIP---K----E  106 (261)
T ss_dssp             HHHTTTCCTTCEEEEECTTC-HHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCC---G----G
T ss_pred             HHHhcCCCCcCEEEEEeCcc-hHHHHHHHhc-CC-EEEEEECCHHHHHHHHHHHHhccceeeeeecccccc---c----c
Confidence            34556788999999999863 7788888765 66 69999999999988876432211  11111110000   0    0


Q ss_pred             cCCcceEEEeCCC-----c---HHHHHHHHHHhccCCEEEEE
Q 017426          259 MGTGIDVSFDCAG-----L---NKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       259 ~~~~~d~vid~~g-----~---~~~~~~~~~~l~~~G~~v~~  292 (372)
                      ..+.||+|+....     .   ...+..+.+.| |+|+++..
T Consensus       107 ~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS  147 (261)
T 3iv6_A          107 LAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS  147 (261)
T ss_dssp             GTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred             cCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence            1367999986432     1   12556677788 99998754

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=94.79  E-value=0.096  Score=46.21  Aligned_cols=73  Identities=12%  Similarity=0.102  Sum_probs=50.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCC
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  271 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  271 (372)
                      +|.|+|+|.+|...++.+...|. .|.+.++++++.+.+.+.|+...       .+..+.+        ...|+||-++.
T Consensus         3 ~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~--------~~advvi~~v~   66 (287)
T 3pdu_A            3 TYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVALGARQA-------SSPAEVC--------AACDITIAMLA   66 (287)
T ss_dssp             CEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHHTCEEC-------SCHHHHH--------HHCSEEEECCS
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-------CCHHHHH--------HcCCEEEEEcC
Confidence            68889999999999888888898 48888999998888777775321       1222221        24678887777


Q ss_pred             cHHHHHHHH
Q 017426          272 LNKTMSTAL  280 (372)
Q Consensus       272 ~~~~~~~~~  280 (372)
                      .+......+
T Consensus        67 ~~~~~~~v~   75 (287)
T 3pdu_A           67 DPAAAREVC   75 (287)
T ss_dssp             SHHHHHHHH
T ss_pred             CHHHHHHHH
Confidence            654444443

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=94.78  E-value=0.09  Score=47.24  Aligned_cols=42  Identities=17%  Similarity=0.129  Sum_probs=33.9

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH
Q 017426          188 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA  230 (372)
Q Consensus       188 ~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~  230 (372)
                      .++.+|||+|+ |.+|..+++.+...|. .|++++++.++.+.+
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~   51 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANL   51 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHH
Confidence            35679999998 9999999999888998 577777877665443

>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}

Probab=94.78  E-value=0.09  Score=49.72  Aligned_cols=104  Identities=20%  Similarity=0.247  Sum_probs=65.8

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHH
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      ....+++|++||=.|+|+ |..+.+++..++- ..+++++.++++.+.+++    +|...+........++...   +  
T Consensus       253 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~---~--  326 (450)
T 2yxl_A          253 IVLDPKPGETVVDLAAAP-GGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEI---I--  326 (450)
T ss_dssp             HHHCCCTTCEEEESSCTT-CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSS---S--
T ss_pred             HhcCCCCcCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchh---h--
Confidence            445678999999888755 6666777777642 479999999998876654    4664433222111111000   0  


Q ss_pred             HcCCcceEEEe---CCCc-------------------------HHHHHHHHHHhccCCEEEEEc
Q 017426          258 AMGTGIDVSFD---CAGL-------------------------NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       258 ~~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~g  293 (372)
                       ..+.||.|+-   |+|.                         ...+..+.+.|+++|+++...
T Consensus       327 -~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~t  389 (450)
T 2yxl_A          327 -GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTT  389 (450)
T ss_dssp             -CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             -ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence             1256999984   4333                         235667888899999988653

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=94.78  E-value=0.076  Score=44.92  Aligned_cols=98  Identities=21%  Similarity=0.333  Sum_probs=64.2

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCC-CeEEecCCCcccHHHHHHHHHHHc
Q 017426          185 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGA-DNIVKVSTNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       185 ~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~-~~v~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      ..++++.+||=.|+|..|..++.+++..+. .|++++.+++..+.+++    .+. ..++..+.  ..+    ..+   .
T Consensus        51 ~~~~~~~~vLDlG~G~~G~~~~~la~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~--~~~----~~~---~  120 (230)
T 3evz_A           51 TFLRGGEVALEIGTGHTAMMALMAEKFFNC-KVTATEVDEEFFEYARRNIERNNSNVRLVKSNG--GII----KGV---V  120 (230)
T ss_dssp             TTCCSSCEEEEECCTTTCHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSS--CSS----TTT---C
T ss_pred             hhcCCCCEEEEcCCCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCc--hhh----hhc---c
Confidence            446789999999888568888888877655 79999999988777654    343 12222111  001    001   1


Q ss_pred             CCcceEEEeCCCc-------------------------HHHHHHHHHHhccCCEEEEE
Q 017426          260 GTGIDVSFDCAGL-------------------------NKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       260 ~~~~d~vid~~g~-------------------------~~~~~~~~~~l~~~G~~v~~  292 (372)
                      .+.+|+|+-...-                         ...+..+.+.|+++|+++.+
T Consensus       121 ~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  178 (230)
T 3evz_A          121 EGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY  178 (230)
T ss_dssp             CSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             cCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence            3679999953110                         34566777889999998875

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=94.78  E-value=0.25  Score=43.20  Aligned_cols=85  Identities=16%  Similarity=0.141  Sum_probs=56.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCC
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  271 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  271 (372)
                      +|.|+|+|.+|.+.+..+...|. .|++.++++++.+.+.+.|..... ..+    +.       + . ...|+||-++.
T Consensus         2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~-~~~----~~-------~-~-~~~D~vi~av~   66 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEA-GQD----LS-------L-L-QTAKIIFLCTP   66 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEE-ESC----GG-------G-G-TTCSEEEECSC
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCCccc-cCC----HH-------H-h-CCCCEEEEECC
Confidence            68899999999999998888898 688889999888888777753211 111    10       0 1 46888998888


Q ss_pred             cHHHHHHHHHH----hccCCEEEEE
Q 017426          272 LNKTMSTALGA----TCAGGKVCLV  292 (372)
Q Consensus       272 ~~~~~~~~~~~----l~~~G~~v~~  292 (372)
                      .. .....+..    ++++..++.+
T Consensus        67 ~~-~~~~~~~~l~~~~~~~~~vv~~   90 (279)
T 2f1k_A           67 IQ-LILPTLEKLIPHLSPTAIVTDV   90 (279)
T ss_dssp             HH-HHHHHHHHHGGGSCTTCEEEEC
T ss_pred             HH-HHHHHHHHHHhhCCCCCEEEEC
Confidence            54 33433333    3344444444

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=94.76  E-value=0.12  Score=46.20  Aligned_cols=87  Identities=16%  Similarity=0.179  Sum_probs=58.3

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCC
Q 017426          191 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  270 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  270 (372)
                      .+|.|+|+|.+|...+..+...|.+ |++.++++++.+.+.+.|...   .    .+..+.+        ...|+||.|+
T Consensus        31 ~~I~iIG~G~mG~~~a~~l~~~g~~-V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~--------~~~DvVi~av   94 (316)
T 2uyy_A           31 KKIGFLGLGLMGSGIVSNLLKMGHT-VTVWNRTAEKCDLFIQEGARL---G----RTPAEVV--------STCDITFACV   94 (316)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTCC-EEEECSSGGGGHHHHHTTCEE---C----SCHHHHH--------HHCSEEEECC
T ss_pred             CeEEEEcccHHHHHHHHHHHhCCCE-EEEEeCCHHHHHHHHHcCCEE---c----CCHHHHH--------hcCCEEEEeC
Confidence            5799999999999999888888984 788888888877777766531   1    1222211        2478888888


Q ss_pred             CcHHHHHHHHH-------HhccCCEEEEEc
Q 017426          271 GLNKTMSTALG-------ATCAGGKVCLVG  293 (372)
Q Consensus       271 g~~~~~~~~~~-------~l~~~G~~v~~g  293 (372)
                      ..+......+.       .+.++..++.++
T Consensus        95 ~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s  124 (316)
T 2uyy_A           95 SDPKAAKDLVLGPSGVLQGIRPGKCYVDMS  124 (316)
T ss_dssp             SSHHHHHHHHHSTTCGGGGCCTTCEEEECS
T ss_pred             CCHHHHHHHHcCchhHhhcCCCCCEEEECC
Confidence            85545555443       344555555554

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=94.76  E-value=0.087  Score=47.72  Aligned_cols=95  Identities=28%  Similarity=0.247  Sum_probs=56.4

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh----hHHHHHHH---hCCCeEEecCCCcccHHHHHHHHHHHcCC
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD----YRLSVAKE---IGADNIVKVSTNLQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~----~~~~~~~~---lg~~~v~~~~~~~~~~~~~~~~~~~~~~~  261 (372)
                      ..+|||+|+ |.+|..+++.+...|.+ |+++.+++    ++.+.++.   .++.. +..|-.  + .+.+.+..+  ..
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~-V~~l~R~~~~~~~~~~~~~~l~~~~v~~-~~~Dl~--d-~~~l~~~~~--~~   82 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRP-TYILARPGPRSPSKAKIFKALEDKGAII-VYGLIN--E-QEAMEKILK--EH   82 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHHHHHHTTCEE-EECCTT--C-HHHHHHHHH--HT
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCC-EEEEECCCCCChhHHHHHHHHHhCCcEE-EEeecC--C-HHHHHHHHh--hC
Confidence            358999998 99999999999999985 66665654    45444333   34433 222222  2 223433332  13


Q ss_pred             cceEEEeCCCcH--HHHHHHHHHhccCC---EEEE
Q 017426          262 GIDVSFDCAGLN--KTMSTALGATCAGG---KVCL  291 (372)
Q Consensus       262 ~~d~vid~~g~~--~~~~~~~~~l~~~G---~~v~  291 (372)
                      ++|+||.+.+..  .....+++.++..|   +++.
T Consensus        83 ~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~  117 (346)
T 3i6i_A           83 EIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP  117 (346)
T ss_dssp             TCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred             CCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence            899999998853  12234555554444   5553

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=94.72  E-value=0.095  Score=47.30  Aligned_cols=132  Identities=17%  Similarity=0.021  Sum_probs=79.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc-CCCeEEEEecChhHHH-HHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          191 TNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      -+|.|+|+|.+|...+..++.. +++.+.+.++++++.+ +++++|...+  +    .++.+    +..  ...+|+|+.
T Consensus         6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~--~----~~~~~----ll~--~~~~D~V~i   73 (330)
T 3e9m_A            6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVA--Y----GSYEE----LCK--DETIDIIYI   73 (330)
T ss_dssp             EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCC--B----SSHHH----HHH--CTTCSEEEE
T ss_pred             EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCce--e----CCHHH----Hhc--CCCCCEEEE
Confidence            3788899999998888777764 5644445577777654 5567776432  1    23332    322  357999999


Q ss_pred             CCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchh----hhccCcEEE-ee-ccCCCcHHHHHHHHHcCCC
Q 017426          269 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDVV-GV-FRYKNTWPLCLELLRSGKI  335 (372)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i~-~~-~~~~~~~~~~~~ll~~g~~  335 (372)
                      |+....+.+.+..++.. |+.+.+.-......-....    .-.+++.+. +. ..+...+..+.+++++|.+
T Consensus        74 ~tp~~~h~~~~~~al~~-gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  145 (330)
T 3e9m_A           74 PTYNQGHYSAAKLALSQ-GKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQKSVFLPITQKVKATIQEGGL  145 (330)
T ss_dssp             CCCGGGHHHHHHHHHHT-TCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECCSGGGCHHHHHHHHHHHTTTT
T ss_pred             cCCCHHHHHHHHHHHHC-CCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEhhhhCHHHHHHHHHHhCCCC
Confidence            99988777778877775 4555554221111111111    112233222 22 2235678888899999887

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=94.71  E-value=0.094  Score=45.14  Aligned_cols=84  Identities=15%  Similarity=0.138  Sum_probs=47.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHH---hCCCe-EEecCCCc-ccHHHHHHHHHHH---
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKE---IGADN-IVKVSTNL-QDIAEEVEKIQKA---  258 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~---lg~~~-v~~~~~~~-~~~~~~~~~~~~~---  258 (372)
                      .+.++||+|+ +++|.++++.+...|+++++...+++++.+ .+++   .+... .+..+-.+ .+....+.++.+.   
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence            4678999987 999999999999999954343455554433 2222   33221 22222222 2222222222211   


Q ss_pred             --cCCcceEEEeCCCc
Q 017426          259 --MGTGIDVSFDCAGL  272 (372)
Q Consensus       259 --~~~~~d~vid~~g~  272 (372)
                        ..+++|++|++.|.
T Consensus        86 ~~~~~~id~lv~nAg~  101 (255)
T 3icc_A           86 RTGSTKFDILINNAGI  101 (255)
T ss_dssp             HHSSSCEEEEEECCCC
T ss_pred             cccCCcccEEEECCCC
Confidence              12459999998874

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=94.71  E-value=0.17  Score=46.34  Aligned_cols=85  Identities=22%  Similarity=0.264  Sum_probs=51.9

Q ss_pred             CCCCEEEEECC-CHHHHHH-HHHHHHcCCCeEEEEecChh----------------HHHHHHHhCCCeE-EecCCCcccH
Q 017426          188 GPETNVLIMGA-GPIGLVT-MLAARAFGAPRIVIVDVDDY----------------RLSVAKEIGADNI-VKVSTNLQDI  248 (372)
Q Consensus       188 ~~g~~vlI~Ga-g~~G~~a-i~l~~~~g~~~vv~v~~~~~----------------~~~~~~~lg~~~v-~~~~~~~~~~  248 (372)
                      ..+.++||+|+ +++|+++ +.+|...|+. ++++....+                -.+.+++.|.... +..|-.+++.
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~-vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAA-TIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCE-EEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCC-EEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence            45789999998 9999984 5566577884 666644321                1245566675443 4444433333


Q ss_pred             HHHHHHHHHHcCCcceEEEeCCCcH
Q 017426          249 AEEVEKIQKAMGTGIDVSFDCAGLN  273 (372)
Q Consensus       249 ~~~~~~~~~~~~~~~d~vid~~g~~  273 (372)
                      .+.+-+..+...+++|+++.+++.+
T Consensus       127 i~~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          127 KAQVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHHhcCCCCEEEEecccc
Confidence            3333332333468999999988754

>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}

Probab=94.69  E-value=0.07  Score=45.99  Aligned_cols=102  Identities=19%  Similarity=0.114  Sum_probs=68.7

Q ss_pred             HHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEecChhHHHHHHHhCC-CeEEecCCCcccHHHHHHHHH
Q 017426          179 VHACRRANIGPETNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIGA-DNIVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       179 ~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~~~~~~  256 (372)
                      ...++....+++.+||-.|+| .|..+..+++.. +. .+++++.+++..+.+++... ..++..+.  .++.       
T Consensus        23 ~~l~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~d~--~~~~-------   91 (259)
T 2p35_A           23 RDLLAQVPLERVLNGYDLGCG-PGNSTELLTDRYGVN-VITGIDSDDDMLEKAADRLPNTNFGKADL--ATWK-------   91 (259)
T ss_dssp             HHHHTTCCCSCCSSEEEETCT-TTHHHHHHHHHHCTT-SEEEEESCHHHHHHHHHHSTTSEEEECCT--TTCC-------
T ss_pred             HHHHHhcCCCCCCEEEEecCc-CCHHHHHHHHhCCCC-EEEEEECCHHHHHHHHHhCCCcEEEECCh--hhcC-------
Confidence            344555667888999999986 477777888775 45 69999999998888876532 22222111  1110       


Q ss_pred             HHcCCcceEEEeCCC------cHHHHHHHHHHhccCCEEEEEc
Q 017426          257 KAMGTGIDVSFDCAG------LNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       257 ~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                        ....+|+|+....      -...+..+.+.|+++|.++...
T Consensus        92 --~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  132 (259)
T 2p35_A           92 --PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM  132 (259)
T ss_dssp             --CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             --ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence              1367999986432      2345677888999999988764

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=94.67  E-value=0.2  Score=47.33  Aligned_cols=94  Identities=11%  Similarity=0.070  Sum_probs=56.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-HhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      +.+|+|+|+|.+|.++++.+...|. .|++++++.++.+.+. .++....+..+-  .++ +.+.+..    .++|+|++
T Consensus         3 ~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~~~a~~la~~~~~~~~~~~Dv--~d~-~~l~~~l----~~~DvVIn   74 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDV--NDD-AALDAEV----AKHDLVIS   74 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSHHHHHHTTTTCTTEEEEECCT--TCH-HHHHHHH----TTSSEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCHHHHHHHHHhcCCceEEEeec--CCH-HHHHHHH----cCCcEEEE
Confidence            5689999999999999998888897 5788888877665432 333212222222  122 2233332    37999999


Q ss_pred             CCCcHHHHHHHHHHhccCCEEEE
Q 017426          269 CAGLNKTMSTALGATCAGGKVCL  291 (372)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~G~~v~  291 (372)
                      +++..........++..+-.++.
T Consensus        75 ~a~~~~~~~i~~a~l~~g~~vvd   97 (450)
T 1ff9_A           75 LIPYTFHATVIKSAIRQKKHVVT   97 (450)
T ss_dssp             CCC--CHHHHHHHHHHHTCEEEE
T ss_pred             CCccccchHHHHHHHhCCCeEEE
Confidence            99853222334445555545444

>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3

Probab=94.67  E-value=0.2  Score=41.90  Aligned_cols=100  Identities=15%  Similarity=0.153  Sum_probs=61.0

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHH----HHHHhCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017426          185 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS----VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG  260 (372)
Q Consensus       185 ~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~----~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~  260 (372)
                      ..+++|++||=.|+|. |..+..+++..+...|++++.+++..+    .++...  .+........+... ...    ..
T Consensus        53 ~~~~~g~~VLDlGcGt-G~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~--~v~~~~~d~~~~~~-~~~----~~  124 (210)
T 1nt2_A           53 LKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERN--NIIPLLFDASKPWK-YSG----IV  124 (210)
T ss_dssp             CCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCS--SEEEECSCTTCGGG-TTT----TC
T ss_pred             cCCCCCCEEEEECCcC-CHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCC--CeEEEEcCCCCchh-hcc----cc
Confidence            4578999999998863 677777887775347999999987533    333332  22111111111100 000    13


Q ss_pred             CcceEEEeCCCcHH----HHHHHHHHhccCCEEEEE
Q 017426          261 TGIDVSFDCAGLNK----TMSTALGATCAGGKVCLV  292 (372)
Q Consensus       261 ~~~d~vid~~g~~~----~~~~~~~~l~~~G~~v~~  292 (372)
                      +.+|+|+.....+.    .+..+.+.|+|+|+++..
T Consensus       125 ~~fD~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~  160 (210)
T 1nt2_A          125 EKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM  160 (210)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cceeEEEEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence            57999987654321    256788899999999876

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=94.66  E-value=0.27  Score=42.67  Aligned_cols=96  Identities=19%  Similarity=0.225  Sum_probs=62.6

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHc---CCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHHHc
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAF---GAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~---g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      +++|.+||=+|+|. |..+..+++..   |+ .|++++.+++-.+.+++    .+...-+.+..  .|.    .++   .
T Consensus        68 ~~~~~~vLDlGcGt-G~~~~~la~~~~~~~~-~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~--~D~----~~~---~  136 (261)
T 4gek_A           68 VQPGTQVYDLGCSL-GAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIE--GDI----RDI---A  136 (261)
T ss_dssp             CCTTCEEEEETCTT-THHHHHHHHTCCSSSC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE--SCT----TTC---C
T ss_pred             CCCCCEEEEEeCCC-CHHHHHHHHhcCCCCC-EEEEEECCHHHHHHHHHHHHhhccCceEEEee--ccc----ccc---c
Confidence            78999999999863 77778888864   45 69999999988777654    34321111100  111    111   1


Q ss_pred             CCcceEEEeCCC-----cH---HHHHHHHHHhccCCEEEEEc
Q 017426          260 GTGIDVSFDCAG-----LN---KTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       260 ~~~~d~vid~~g-----~~---~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ...+|+|+-...     .+   ..+..+.+.|+|+|.++...
T Consensus       137 ~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e  178 (261)
T 4gek_A          137 IENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSE  178 (261)
T ss_dssp             CCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEe
Confidence            356898875322     11   35778899999999998764

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=94.65  E-value=0.11  Score=44.39  Aligned_cols=67  Identities=21%  Similarity=0.264  Sum_probs=42.5

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccH--HHHHHHHHHHcCCcceEEEe
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI--AEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~d~vid  268 (372)
                      ++||+|+ |.+|..++..+...|+ .|+++++++++.+.      .    +.   .|+  .+.++++.+...+++|++|+
T Consensus         3 ~vlVtGasg~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~------~----~~---~D~~~~~~~~~~~~~~~~~~d~vi~   68 (255)
T 2dkn_A            3 VIAITGSASGIGAALKELLARAGH-TVIGIDRGQADIEA------D----LS---TPGGRETAVAAVLDRCGGVLDGLVC   68 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------C----TT---SHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCChhHccc------c----cc---CCcccHHHHHHHHHHcCCCccEEEE
Confidence            6899998 9999999999888998 57777776543210      0    10   111  12233332211358999999


Q ss_pred             CCCc
Q 017426          269 CAGL  272 (372)
Q Consensus       269 ~~g~  272 (372)
                      +.|.
T Consensus        69 ~Ag~   72 (255)
T 2dkn_A           69 CAGV   72 (255)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8764

>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53

Probab=94.62  E-value=0.26  Score=41.11  Aligned_cols=98  Identities=16%  Similarity=0.128  Sum_probs=63.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHHHcCCcc
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      .++.+||=+|+| .|..++.+++......+++++.+++..+.+++    .+...+........++.+.   +   ..+.+
T Consensus        40 ~~~~~vLDiGcG-~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~---~---~~~~~  112 (214)
T 1yzh_A           40 NDNPIHVEVGSG-KGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDY---F---EDGEI  112 (214)
T ss_dssp             SCCCEEEEESCT-TSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGT---S---CTTCC
T ss_pred             CCCCeEEEEccC-cCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhh---c---CCCCC
Confidence            457788888876 47778888888743479999999988776654    4443332221211221110   0   13569


Q ss_pred             eEEEeCCCc--------------HHHHHHHHHHhccCCEEEEE
Q 017426          264 DVSFDCAGL--------------NKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       264 d~vid~~g~--------------~~~~~~~~~~l~~~G~~v~~  292 (372)
                      |.|+-....              ...+..+.+.|+++|.++..
T Consensus       113 D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  155 (214)
T 1yzh_A          113 DRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK  155 (214)
T ss_dssp             SEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred             CEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence            998865443              35778889999999998775

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=94.61  E-value=0.13  Score=45.32  Aligned_cols=74  Identities=16%  Similarity=0.156  Sum_probs=48.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC-CCeEEEEecChhHH--HHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceE
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFG-APRIVIVDVDDYRL--SVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g-~~~vv~v~~~~~~~--~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~  265 (372)
                      ..+|||+|+ |.+|..+++.+...| . .|+++++++++.  ..+...++.. +..|-.+   .+.+.+..    .++|+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~R~~~~~~~~~l~~~~~~~-~~~D~~d---~~~l~~~~----~~~d~   75 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTF-KVRVVTRNPRKKAAKELRLQGAEV-VQGDQDD---QVIMELAL----NGAYA   75 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSS-EEEEEESCTTSHHHHHHHHTTCEE-EECCTTC---HHHHHHHH----TTCSE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCc-eEEEEEcCCCCHHHHHHHHCCCEE-EEecCCC---HHHHHHHH----hcCCE
Confidence            468999998 999999998888878 7 577777776543  2333445443 2222221   22344433    46999


Q ss_pred             EEeCCCc
Q 017426          266 SFDCAGL  272 (372)
Q Consensus       266 vid~~g~  272 (372)
                      ||.+.+.
T Consensus        76 vi~~a~~   82 (299)
T 2wm3_A           76 TFIVTNY   82 (299)
T ss_dssp             EEECCCH
T ss_pred             EEEeCCC
Confidence            9999874

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=94.59  E-value=0.038  Score=47.96  Aligned_cols=98  Identities=13%  Similarity=0.154  Sum_probs=60.1

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-HhCCCeEEecCCCcccHHHHHHHHHHHc
Q 017426          181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       181 ~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      +++...+ .+ +++|+|+|.+|.+++..+...|++.+.+++++.++.+.+. +++.   ..+    .++    .+..   
T Consensus       101 ~l~~~~~-~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~---~~~----~~~----~~~~---  164 (253)
T 3u62_A          101 SLEGVEV-KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKI---FSL----DQL----DEVV---  164 (253)
T ss_dssp             HTTTCCC-CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEE---EEG----GGH----HHHH---
T ss_pred             HHHhcCC-CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHccc---CCH----HHH----Hhhh---
Confidence            3443344 46 9999999999999999999999977888889887765432 2221   121    122    2221   


Q ss_pred             CCcceEEEeCCCcH---HHHHHHHHHhccCCEEEEEcCC
Q 017426          260 GTGIDVSFDCAGLN---KTMSTALGATCAGGKVCLVGMG  295 (372)
Q Consensus       260 ~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~  295 (372)
                       ..+|+||+|++..   .........++++..++.+...
T Consensus       165 -~~aDiVInatp~gm~p~~~~i~~~~l~~~~~V~Divy~  202 (253)
T 3u62_A          165 -KKAKSLFNTTSVGMKGEELPVSDDSLKNLSLVYDVIYF  202 (253)
T ss_dssp             -HTCSEEEECSSTTTTSCCCSCCHHHHTTCSEEEECSSS
T ss_pred             -cCCCEEEECCCCCCCCCCCCCCHHHhCcCCEEEEeeCC
Confidence             3689999987531   0000112446666666665443

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=94.58  E-value=0.079  Score=46.04  Aligned_cols=82  Identities=18%  Similarity=0.193  Sum_probs=48.3

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCeEEEEecChhH--HHHHH----HhCCCeE-EecCCC-cccHHHHHHHHHH
Q 017426          189 PETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDDYR--LSVAK----EIGADNI-VKVSTN-LQDIAEEVEKIQK  257 (372)
Q Consensus       189 ~g~~vlI~Ga---g~~G~~ai~l~~~~g~~~vv~v~~~~~~--~~~~~----~lg~~~v-~~~~~~-~~~~~~~~~~~~~  257 (372)
                      .+.++||+|+   +++|.++++.+...|+ .|+++.++.++  .+.++    ..+.... +..|-. ..+..+.+.++.+
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGA-AVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVA   97 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSC-EEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHH
Confidence            4678999975   4899999999999999 46666554322  22222    3343321 112222 2233344444433


Q ss_pred             HcCCcceEEEeCCCc
Q 017426          258 AMGTGIDVSFDCAGL  272 (372)
Q Consensus       258 ~~~~~~d~vid~~g~  272 (372)
                       ..+++|++|++.|.
T Consensus        98 -~~g~id~li~nAg~  111 (267)
T 3gdg_A           98 -DFGQIDAFIANAGA  111 (267)
T ss_dssp             -HTSCCSEEEECCCC
T ss_pred             -HcCCCCEEEECCCc
Confidence             24689999998873

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=94.56  E-value=0.1  Score=46.96  Aligned_cols=77  Identities=18%  Similarity=0.170  Sum_probs=47.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHH--HHHHHhCC--C-eEEecCCCcccHHHHHHHHHHHcCCcc
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRL--SVAKEIGA--D-NIVKVSTNLQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~--~~~~~lg~--~-~v~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      +.+|||+|+ |.+|..+++.+...|. .|+++++++++.  +.++.++.  . ..+..|-.  + .+.+.+..+  +.++
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~--d-~~~~~~~~~--~~~~   76 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGIENDVKIIHMDLL--E-FSNIIRTIE--KVQP   76 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTT--C-HHHHHHHHH--HHCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccccCceeEEECCCC--C-HHHHHHHHH--hcCC
Confidence            568999998 9999999998888898 577777765432  23444431  1 11211211  2 123333332  1258


Q ss_pred             eEEEeCCCc
Q 017426          264 DVSFDCAGL  272 (372)
Q Consensus       264 d~vid~~g~  272 (372)
                      |+||++.+.
T Consensus        77 d~vih~A~~   85 (345)
T 2z1m_A           77 DEVYNLAAQ   85 (345)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998874

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=94.55  E-value=0.24  Score=44.91  Aligned_cols=90  Identities=16%  Similarity=0.120  Sum_probs=60.3

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCC
Q 017426          191 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  270 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  270 (372)
                      .+|.|+|.|.+|.+++..++..|. .|++.++++++.+.+.++|+...       .++.+.+....    ...|+||-++
T Consensus         9 ~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~~~~~~~a~~~G~~~~-------~~~~e~~~~a~----~~aDlVilav   76 (341)
T 3ktd_A            9 RPVCILGLGLIGGSLLRDLHAANH-SVFGYNRSRSGAKSAVDEGFDVS-------ADLEATLQRAA----AEDALIVLAV   76 (341)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHTTCCEE-------SCHHHHHHHHH----HTTCEEEECS
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeee-------CCHHHHHHhcc----cCCCEEEEeC
Confidence            579999999999999999999998 58899999999998888887421       12333332211    2568888888


Q ss_pred             CcHHHHHHHHHH---hccCCEEEEEc
Q 017426          271 GLNKTMSTALGA---TCAGGKVCLVG  293 (372)
Q Consensus       271 g~~~~~~~~~~~---l~~~G~~v~~g  293 (372)
                      ... .....+..   ++++..++.++
T Consensus        77 P~~-~~~~vl~~l~~~~~~~iv~Dv~  101 (341)
T 3ktd_A           77 PMT-AIDSLLDAVHTHAPNNGFTDVV  101 (341)
T ss_dssp             CHH-HHHHHHHHHHHHCTTCCEEECC
T ss_pred             CHH-HHHHHHHHHHccCCCCEEEEcC
Confidence            853 33333322   34444444444

>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*

Probab=94.54  E-value=0.22  Score=42.46  Aligned_cols=101  Identities=16%  Similarity=0.085  Sum_probs=57.7

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHH----HHHHhCCCeEEecCCCcccHHHHHHHHHHH
Q 017426          184 RANIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLS----VAKEIGADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       184 ~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~----~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      ...+++|++||=.|+|+ |..+..+++..| -..|++++.++...+    .+++..-...+.-+......   ...    
T Consensus        71 ~~~l~~g~~VLDlG~Gt-G~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~---~~~----  142 (232)
T 3id6_C           71 TNPIRKGTKVLYLGAAS-GTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQS---YKS----  142 (232)
T ss_dssp             CCSCCTTCEEEEETCTT-SHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGG---TTT----
T ss_pred             hcCCCCCCEEEEEeecC-CHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchh---hhc----
Confidence            35689999999998753 556666776654 237999999997643    22222111112112111110   000    


Q ss_pred             cCCcceEEEeCCCcHHH---HH-HHHHHhccCCEEEEE
Q 017426          259 MGTGIDVSFDCAGLNKT---MS-TALGATCAGGKVCLV  292 (372)
Q Consensus       259 ~~~~~d~vid~~g~~~~---~~-~~~~~l~~~G~~v~~  292 (372)
                      ....+|+||-....+..   +. .+.+.|+++|+++..
T Consensus       143 ~~~~~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvis  180 (232)
T 3id6_C          143 VVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLV  180 (232)
T ss_dssp             TCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccceEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEE
Confidence            13579999855443322   22 333489999999875

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=94.53  E-value=0.21  Score=44.17  Aligned_cols=87  Identities=15%  Similarity=0.206  Sum_probs=56.9

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCC
Q 017426          191 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  270 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  270 (372)
                      -+|.|+|+|.+|...+..+...|. .|++.++++++.+.+.+.|..   .+    .++.+.+        ...|+||-++
T Consensus         5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~---~~----~~~~~~~--------~~~D~vi~~v   68 (301)
T 3cky_A            5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLMEANVAAVVAQGAQ---AC----ENNQKVA--------AASDIIFTSL   68 (301)
T ss_dssp             CEEEEECCCTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHTTTCE---EC----SSHHHHH--------HHCSEEEECC
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCe---ec----CCHHHHH--------hCCCEEEEEC
Confidence            479999999999999888888898 578888888887776665542   11    1222211        2478888888


Q ss_pred             CcHHHHHHHH-------HHhccCCEEEEEc
Q 017426          271 GLNKTMSTAL-------GATCAGGKVCLVG  293 (372)
Q Consensus       271 g~~~~~~~~~-------~~l~~~G~~v~~g  293 (372)
                      ..+......+       ..++++..++.++
T Consensus        69 p~~~~~~~v~~~~~~l~~~l~~~~~vv~~~   98 (301)
T 3cky_A           69 PNAGIVETVMNGPGGVLSACKAGTVIVDMS   98 (301)
T ss_dssp             SSHHHHHHHHHSTTCHHHHSCTTCEEEECC
T ss_pred             CCHHHHHHHHcCcchHhhcCCCCCEEEECC
Confidence            6554444443       3455555555543

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=94.53  E-value=0.079  Score=48.26  Aligned_cols=89  Identities=18%  Similarity=0.222  Sum_probs=59.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          189 PETNVLIMGAGPIGLVTMLAAR-AFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~-~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      .|.+|.|+|.|.+|..+++.++ .+|. .|++.+++.++.+...++|+..+       .++.+    +.    ...|+|+
T Consensus       162 ~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~e----ll----~~aDvVi  225 (348)
T 2w2k_A          162 RGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVAPADAETEKALGAERV-------DSLEE----LA----RRSDCVS  225 (348)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHTCEEC-------SSHHH----HH----HHCSEEE
T ss_pred             CCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCCCcchhhHhhcCcEEe-------CCHHH----Hh----ccCCEEE
Confidence            5789999999999999999999 9998 68888887766665666665321       12222    21    2468888


Q ss_pred             eCCCcHHH----H-HHHHHHhccCCEEEEEc
Q 017426          268 DCAGLNKT----M-STALGATCAGGKVCLVG  293 (372)
Q Consensus       268 d~~g~~~~----~-~~~~~~l~~~G~~v~~g  293 (372)
                      .++.....    + ...+..|+++..++.++
T Consensus       226 l~vp~~~~t~~li~~~~l~~mk~gailin~s  256 (348)
T 2w2k_A          226 VSVPYMKLTHHLIDEAFFAAMKPGSRIVNTA  256 (348)
T ss_dssp             ECCCCSGGGTTCBCHHHHHHSCTTEEEEECS
T ss_pred             EeCCCChHHHHHhhHHHHhcCCCCCEEEECC
Confidence            77664311    1 23556677666665554

>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53

Probab=94.53  E-value=0.51  Score=39.36  Aligned_cols=99  Identities=9%  Similarity=0.065  Sum_probs=63.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHHHcCCcc
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      .++.+||=+|+| .|..++.+++......+++++.+++..+.+++    .+...+.....+..++    ....  ..+.+
T Consensus        37 ~~~~~vLDiGcG-~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l----~~~~--~~~~~  109 (213)
T 2fca_A           37 NDNPIHIEVGTG-KGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTL----TDVF--EPGEV  109 (213)
T ss_dssp             SCCCEEEEECCT-TSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGH----HHHC--CTTSC
T ss_pred             CCCceEEEEecC-CCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHH----Hhhc--CcCCc
Confidence            356777778876 37888888888643479999999988776654    3544333222222222    1111  23568


Q ss_pred             eEEEeCCC--------------cHHHHHHHHHHhccCCEEEEEc
Q 017426          264 DVSFDCAG--------------LNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       264 d~vid~~g--------------~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      |.|+-...              ....+..+.+.|+++|.++...
T Consensus       110 d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t  153 (213)
T 2fca_A          110 KRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT  153 (213)
T ss_dssp             CEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred             CEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence            88864332              1356788999999999988753

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=94.52  E-value=0.074  Score=47.85  Aligned_cols=89  Identities=16%  Similarity=0.071  Sum_probs=60.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEec-ChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV-DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~-~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      .|.+|.|+|.|.+|..+++.++.+|. .|++.++ +.++ +.+.++|+..   .    .++.+    +.    ...|+|+
T Consensus       145 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~---~----~~l~e----ll----~~aDvVi  207 (320)
T 1gdh_A          145 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASS-SDEASYQATF---H----DSLDS----LL----SVSQFFS  207 (320)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCH-HHHHHHTCEE---C----SSHHH----HH----HHCSEEE
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcCh-hhhhhcCcEE---c----CCHHH----HH----hhCCEEE
Confidence            57789999999999999999999998 6888887 6665 3556677632   1    12222    22    2578888


Q ss_pred             eCCCcHH----HH-HHHHHHhccCCEEEEEcC
Q 017426          268 DCAGLNK----TM-STALGATCAGGKVCLVGM  294 (372)
Q Consensus       268 d~~g~~~----~~-~~~~~~l~~~G~~v~~g~  294 (372)
                      -++....    .+ ...+..|+++..++.++.
T Consensus       208 l~~p~~~~t~~~i~~~~l~~mk~gailIn~ar  239 (320)
T 1gdh_A          208 LNAPSTPETRYFFNKATIKSLPQGAIVVNTAR  239 (320)
T ss_dssp             ECCCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             EeccCchHHHhhcCHHHHhhCCCCcEEEECCC
Confidence            8776431    11 235567888777777654

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=94.52  E-value=0.17  Score=48.45  Aligned_cols=82  Identities=18%  Similarity=0.259  Sum_probs=51.2

Q ss_pred             CCC--CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChh-------HHHHHHHhCCCeE-EecCCCcccHHHHHHHHH
Q 017426          188 GPE--TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY-------RLSVAKEIGADNI-VKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       188 ~~g--~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~-------~~~~~~~lg~~~v-~~~~~~~~~~~~~~~~~~  256 (372)
                      +++  .++||+|+ |++|..+++.+...|+++++.+.++..       ..+.+++.|.... +..|-.+.   +.+.++.
T Consensus       235 ~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~---~~v~~~~  311 (496)
T 3mje_A          235 RPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADR---EALAALL  311 (496)
T ss_dssp             CCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCH---HHHHHHH
T ss_pred             CCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCH---HHHHHHH
Confidence            455  89999987 999999999888899977788777532       1233445565332 22232222   2233333


Q ss_pred             HH--cCCcceEEEeCCCc
Q 017426          257 KA--MGTGIDVSFDCAGL  272 (372)
Q Consensus       257 ~~--~~~~~d~vid~~g~  272 (372)
                      +.  ..+++|++|++.|.
T Consensus       312 ~~i~~~g~ld~vVh~AGv  329 (496)
T 3mje_A          312 AELPEDAPLTAVFHSAGV  329 (496)
T ss_dssp             HTCCTTSCEEEEEECCCC
T ss_pred             HHHHHhCCCeEEEECCcc
Confidence            21  12579999998874

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4

Probab=94.52  E-value=0.28  Score=39.72  Aligned_cols=102  Identities=18%  Similarity=0.265  Sum_probs=65.9

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh----CCCe--EEecCCCcccHHHHHHH
Q 017426          181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GADN--IVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       181 ~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l----g~~~--v~~~~~~~~~~~~~~~~  254 (372)
                      .++....+++.+||-.|+|. |..+..+++. +. .+++++.+++..+.+++.    +...  +.....   ++.+..  
T Consensus        44 l~~~~~~~~~~~vLdiG~G~-G~~~~~~~~~-~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~---d~~~~~--  115 (194)
T 1dus_A           44 LVENVVVDKDDDILDLGCGY-GVIGIALADE-VK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHS---DLYENV--  115 (194)
T ss_dssp             HHHHCCCCTTCEEEEETCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEEC---STTTTC--
T ss_pred             HHHHcccCCCCeEEEeCCCC-CHHHHHHHHc-CC-eEEEEECCHHHHHHHHHHHHHcCCCccceEEEEC---chhccc--
Confidence            44566777899999998763 6777777777 65 799999999887776543    4332  211111   111101  


Q ss_pred             HHHHcCCcceEEEeCCCc-------HHHHHHHHHHhccCCEEEEEcC
Q 017426          255 IQKAMGTGIDVSFDCAGL-------NKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~-------~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                          ....+|+|+....-       ...+..+.+.|+++|.++....
T Consensus       116 ----~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  158 (194)
T 1dus_A          116 ----KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ  158 (194)
T ss_dssp             ----TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ----ccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence                13579999864321       2356677889999999887643

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=94.49  E-value=0.34  Score=44.06  Aligned_cols=98  Identities=14%  Similarity=0.094  Sum_probs=56.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHH--HHHHHhCCCeEEecC-CCcccHHHHHHHHHHHcCCcceE
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRL--SVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~--~~~~~lg~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~d~  265 (372)
                      +.+|||+|+ |.+|..+++.+...|.+ |+++.+++++.  +.+....-..++..| -.+   .+.+.+..    .++|+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d---~~~l~~~~----~~~d~   76 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHH-VRAQVHSLKGLIAEELQAIPNVTLFQGPLLNN---VPLMDTLF----EGAHL   76 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCSCSHHHHHHHTSTTEEEEESCCTTC---HHHHHHHH----TTCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCE-EEEEECCCChhhHHHHhhcCCcEEEECCccCC---HHHHHHHH----hcCCE
Confidence            468999998 99999999988888985 66666666543  223322111222222 211   22344433    46899


Q ss_pred             EEeCCCcH-----HHHHHHHHHhccC---CEEEEEcCC
Q 017426          266 SFDCAGLN-----KTMSTALGATCAG---GKVCLVGMG  295 (372)
Q Consensus       266 vid~~g~~-----~~~~~~~~~l~~~---G~~v~~g~~  295 (372)
                      ||.+.+..     .....+++.+...   ++++.++..
T Consensus        77 Vi~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~  114 (352)
T 1xgk_A           77 AFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMP  114 (352)
T ss_dssp             EEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred             EEEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence            99766532     1223444444433   588887643

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=94.49  E-value=0.11  Score=45.97  Aligned_cols=74  Identities=24%  Similarity=0.396  Sum_probs=47.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecC------hhHHHHHHH---hCCCeEEecCCCcccHHHHHHHHHHHc
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD------DYRLSVAKE---IGADNIVKVSTNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~------~~~~~~~~~---lg~~~v~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      ..+|||+|+ |.+|..+++.+...|.+ |+++.++      +++.+.++.   .++. ++..|-.  + .+.+.+..   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~l~R~~~~~~~~~~~~~~~~l~~~~v~-~v~~D~~--d-~~~l~~~~---   75 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHP-TFLLVRESTASSNSEKAQLLESFKASGAN-IVHGSID--D-HASLVEAV---   75 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCC-EEEECCCCCTTTTHHHHHHHHHHHTTTCE-EECCCTT--C-HHHHHHHH---
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCC-EEEEECCcccccCHHHHHHHHHHHhCCCE-EEEeccC--C-HHHHHHHH---
Confidence            357999998 99999999999989985 6666665      334443333   3443 2222222  2 23344443   


Q ss_pred             CCcceEEEeCCCc
Q 017426          260 GTGIDVSFDCAGL  272 (372)
Q Consensus       260 ~~~~d~vid~~g~  272 (372)
                       .++|+||.+.+.
T Consensus        76 -~~~d~vi~~a~~   87 (308)
T 1qyc_A           76 -KNVDVVISTVGS   87 (308)
T ss_dssp             -HTCSEEEECCCG
T ss_pred             -cCCCEEEECCcc
Confidence             369999999875

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=94.45  E-value=0.051  Score=49.02  Aligned_cols=72  Identities=21%  Similarity=0.278  Sum_probs=44.7

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCC
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  270 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  270 (372)
                      +|||+|+ |.+|..+++.+...|. .|+++++++.+.+.+...++.. +..+-.  + .+.+.+..    .++|+||.+.
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~-~~~Dl~--d-~~~~~~~~----~~~d~vih~a   85 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLAYLEPEC-RVAEML--D-HAGLERAL----RGLDGVIFSA   85 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGGGGCCEE-EECCTT--C-HHHHHHHT----TTCSEEEEC-
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhccCCeEE-EEecCC--C-HHHHHHHH----cCCCEEEECC
Confidence            7999998 9999999999988998 5777777665443333234332 222221  1 12344332    4699999988


Q ss_pred             Cc
Q 017426          271 GL  272 (372)
Q Consensus       271 g~  272 (372)
                      +.
T Consensus        86 ~~   87 (342)
T 2x4g_A           86 GY   87 (342)
T ss_dssp             --
T ss_pred             cc
Confidence            74

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=94.43  E-value=0.054  Score=48.69  Aligned_cols=81  Identities=14%  Similarity=0.016  Sum_probs=45.8

Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhH--HHHHHHhC--C-CeEEecCCCcccHHHHHHHHHHHc
Q 017426          186 NIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR--LSVAKEIG--A-DNIVKVSTNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       186 ~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~--~~~~~~lg--~-~~v~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      ..+++.+|||+|+ |.+|..+++.+...|. .|+++++++++  .+.++.+.  . ..++..+-.+   .+.+.++.+  
T Consensus        10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d---~~~~~~~~~--   83 (335)
T 1rpn_A           10 HGSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD---ACSVQRAVI--   83 (335)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTC---HHHHHHHHH--
T ss_pred             ccccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccccCceEEEECCCCC---HHHHHHHHH--
Confidence            3568899999998 9999999999988998 57777665543  12233331  1 1122222211   123333332  


Q ss_pred             CCcceEEEeCCCc
Q 017426          260 GTGIDVSFDCAGL  272 (372)
Q Consensus       260 ~~~~d~vid~~g~  272 (372)
                      +.++|+||.+.+.
T Consensus        84 ~~~~d~Vih~A~~   96 (335)
T 1rpn_A           84 KAQPQEVYNLAAQ   96 (335)
T ss_dssp             HHCCSEEEECCSC
T ss_pred             HcCCCEEEECccc
Confidence            1258999998763

>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}

Probab=94.43  E-value=0.14  Score=46.99  Aligned_cols=104  Identities=15%  Similarity=0.185  Sum_probs=65.9

Q ss_pred             HHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh------------hHHHHHHHhCCCeEEecCCCc
Q 017426          179 VHACRRANIG-PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD------------YRLSVAKEIGADNIVKVSTNL  245 (372)
Q Consensus       179 ~~~l~~~~~~-~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~------------~~~~~~~~lg~~~v~~~~~~~  245 (372)
                      +.+++..+.+ +..+|+|.|+|..|..+++++..+|+++|++++++-            .+..+++....     + ...
T Consensus       176 l~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~-----~-~~~  249 (398)
T 2a9f_A          176 FNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNR-----E-FKS  249 (398)
T ss_dssp             HHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSC-----T-TCC
T ss_pred             HHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCc-----c-cch
Confidence            3444544333 456899999999999999999999998899998752            12222222111     0 112


Q ss_pred             ccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCC
Q 017426          246 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH  296 (372)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  296 (372)
                      .++.+.+        .++|++|.+++....-+..++.|+++..+..++...
T Consensus       250 ~~L~eav--------~~ADV~IG~Sapgl~T~EmVk~Ma~~pIIfalsNPt  292 (398)
T 2a9f_A          250 GTLEDAL--------EGADIFIGVSAPGVLKAEWISKMAARPVIFAMANPI  292 (398)
T ss_dssp             CSCSHHH--------HTTCSEEECCSTTCCCHHHHHTSCSSCEEEECCSSS
T ss_pred             hhHHHHh--------ccCCEEEecCCCCCCCHHHHHhhCCCCEEEECCCCC
Confidence            2333333        247999998774333456888899888777766544

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=94.42  E-value=0.15  Score=42.04  Aligned_cols=62  Identities=19%  Similarity=0.305  Sum_probs=40.2

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCC
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  270 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  270 (372)
                      ++||+|+ |.+|..+++.+. .|+ .|++++++++            .+..|-.+.+   .+.++.+.. +++|++|.+.
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~-~V~~~~r~~~------------~~~~D~~~~~---~~~~~~~~~-~~~d~vi~~a   66 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKA-EVITAGRHSG------------DVTVDITNID---SIKKMYEQV-GKVDAIVSAT   66 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTS-EEEEEESSSS------------SEECCTTCHH---HHHHHHHHH-CCEEEEEECC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCC-eEEEEecCcc------------ceeeecCCHH---HHHHHHHHh-CCCCEEEECC
Confidence            7999998 999999999888 898 5777777654            1122222211   222222211 4799999988


Q ss_pred             C
Q 017426          271 G  271 (372)
Q Consensus       271 g  271 (372)
                      |
T Consensus        67 g   67 (202)
T 3d7l_A           67 G   67 (202)
T ss_dssp             C
T ss_pred             C
Confidence            7

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=94.40  E-value=0.08  Score=44.69  Aligned_cols=64  Identities=16%  Similarity=0.148  Sum_probs=42.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      .+.++||+|+ +++|.++++.+...|+ .|++++++++             .+..+ .++..+.+.++     +++|+++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~-------------~D~~~-~~~v~~~~~~~-----g~id~lv   64 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG-------------LDISD-EKSVYHYFETI-----GAFDHLI   64 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT-------------CCTTC-HHHHHHHHHHH-----CSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc-------------cCCCC-HHHHHHHHHHh-----CCCCEEE
Confidence            3568899987 9999999999888898 5777766554             12211 12222222222     5799999


Q ss_pred             eCCCc
Q 017426          268 DCAGL  272 (372)
Q Consensus       268 d~~g~  272 (372)
                      ++.|.
T Consensus        65 ~nAg~   69 (223)
T 3uce_A           65 VTAGS   69 (223)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            98773

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=94.38  E-value=0.38  Score=40.80  Aligned_cols=95  Identities=15%  Similarity=0.123  Sum_probs=59.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      ....+++|+|+|.+|..+++.+...|.  |+++++++++.+.+. .+.. ++.-+..+.   +.+++.   .-.++|.+|
T Consensus         7 ~~~~~viI~G~G~~G~~la~~L~~~g~--v~vid~~~~~~~~~~-~~~~-~i~gd~~~~---~~l~~a---~i~~ad~vi   76 (234)
T 2aef_A            7 AKSRHVVICGWSESTLECLRELRGSEV--FVLAEDENVRKKVLR-SGAN-FVHGDPTRV---SDLEKA---NVRGARAVI   76 (234)
T ss_dssp             ---CEEEEESCCHHHHHHHHHSTTSEE--EEEESCGGGHHHHHH-TTCE-EEESCTTCH---HHHHHT---TCTTCSEEE
T ss_pred             CCCCEEEEECCChHHHHHHHHHHhCCe--EEEEECCHHHHHHHh-cCCe-EEEcCCCCH---HHHHhc---CcchhcEEE
Confidence            445789999999999999998888886  778888888887776 5643 333222221   223221   236899999


Q ss_pred             eCCCcHHH---HHHHHHHhccCCEEEEE
Q 017426          268 DCAGLNKT---MSTALGATCAGGKVCLV  292 (372)
Q Consensus       268 d~~g~~~~---~~~~~~~l~~~G~~v~~  292 (372)
                      -+++....   .....+.+.+.-+++.-
T Consensus        77 ~~~~~d~~n~~~~~~a~~~~~~~~iia~  104 (234)
T 2aef_A           77 VDLESDSETIHCILGIRKIDESVRIIAE  104 (234)
T ss_dssp             ECCSCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred             EcCCCcHHHHHHHHHHHHHCCCCeEEEE
Confidence            99887522   11233445555565554

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=94.37  E-value=0.34  Score=44.24  Aligned_cols=45  Identities=18%  Similarity=0.269  Sum_probs=38.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA  235 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~  235 (372)
                      .-+|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|+
T Consensus        22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~   66 (358)
T 4e21_A           22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGI   66 (358)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTC
T ss_pred             CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCC
Confidence            3589999999999999999999998 68889999998887776664

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=94.31  E-value=0.086  Score=47.65  Aligned_cols=89  Identities=17%  Similarity=0.166  Sum_probs=59.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .|.+|.|+|.|.+|..+++.++.+|.+ |++.+++.++.+.+.++|....        ++.+    +.    ...|+|+.
T Consensus       154 ~g~~vgIIG~G~iG~~iA~~l~~~G~~-V~~~d~~~~~~~~~~~~g~~~~--------~l~e----~l----~~aDvVi~  216 (330)
T 2gcg_A          154 TQSTVGIIGLGRIGQAIARRLKPFGVQ-RFLYTGRQPRPEEAAEFQAEFV--------STPE----LA----AQSDFIVV  216 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTCC-EEEEESSSCCHHHHHTTTCEEC--------CHHH----HH----HHCSEEEE
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCCE-EEEECCCCcchhHHHhcCceeC--------CHHH----HH----hhCCEEEE
Confidence            467899999999999999999999995 7888777665555555554311        2222    21    25788888


Q ss_pred             CCCcHH----HH-HHHHHHhccCCEEEEEcC
Q 017426          269 CAGLNK----TM-STALGATCAGGKVCLVGM  294 (372)
Q Consensus       269 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~  294 (372)
                      ++....    .+ ...+..|+++..++..+.
T Consensus       217 ~vp~~~~t~~~i~~~~~~~mk~gailIn~sr  247 (330)
T 2gcg_A          217 ACSLTPATEGLCNKDFFQKMKETAVFINISR  247 (330)
T ss_dssp             CCCCCTTTTTCBSHHHHHHSCTTCEEEECSC
T ss_pred             eCCCChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence            876431    11 345567777776666543

>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}

Probab=94.30  E-value=0.12  Score=45.58  Aligned_cols=96  Identities=21%  Similarity=0.295  Sum_probs=63.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC----------CC-eEEecCCCcccHHHHHHHHH
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG----------AD-NIVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg----------~~-~v~~~~~~~~~~~~~~~~~~  256 (372)
                      ...++|||+|+|. |..+-.+++..+.+.+.+++.+++-.+.++++-          .. .++. .+ ...+   +    
T Consensus        82 p~pk~VLIiGgGd-G~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~-~D-g~~~---l----  151 (294)
T 3o4f_A           82 GHAKHVLIIGGGD-GAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVI-DD-GVNF---V----  151 (294)
T ss_dssp             SCCCEEEEESCTT-SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE-SC-TTTT---T----
T ss_pred             CCCCeEEEECCCc-hHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEe-ch-HHHH---H----
Confidence            4457999998644 555667888888888999999999888887642          11 1222 11 1111   2    


Q ss_pred             HHcCCcceEEE-eCCC---------cHHHHHHHHHHhccCCEEEEEc
Q 017426          257 KAMGTGIDVSF-DCAG---------LNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       257 ~~~~~~~d~vi-d~~g---------~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      +.....+|+|| |...         +.+-++.+.+.|+++|.++..+
T Consensus       152 ~~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~  198 (294)
T 3o4f_A          152 NQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN  198 (294)
T ss_dssp             SCSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred             hhccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence            22356899998 3321         1246788999999999998764

>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}

Probab=94.29  E-value=0.56  Score=42.66  Aligned_cols=131  Identities=16%  Similarity=0.167  Sum_probs=79.8

Q ss_pred             EEEEECCCHHHHHHHHHHH-H-cCCCeEEEEecChhHHH-HHHHhCC-CeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          192 NVLIMGAGPIGLVTMLAAR-A-FGAPRIVIVDVDDYRLS-VAKEIGA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~-~-~g~~~vv~v~~~~~~~~-~~~~lg~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      +|.|+|+|.+|...+..++ . -+++.+.+.++++++.+ +++++|. ...  +    .++.    ++.+  ...+|+|+
T Consensus        25 rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~--~----~~~~----~ll~--~~~~D~V~   92 (357)
T 3ec7_A           25 KAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKD--Y----NDYH----DLIN--DKDVEVVI   92 (357)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEE--E----SSHH----HHHH--CTTCCEEE
T ss_pred             eEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCee--e----CCHH----HHhc--CCCCCEEE
Confidence            7899999999988777766 4 46755556777777755 5567884 222  2    2333    2332  35799999


Q ss_pred             eCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchh----hhccCcE--EEee-ccCCCcHHHHHHHHHcCCC
Q 017426          268 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVD--VVGV-FRYKNTWPLCLELLRSGKI  335 (372)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~--i~~~-~~~~~~~~~~~~ll~~g~~  335 (372)
                      .|+....+.+.+..++.. |+.+.+.-......-....    .-.++..  ..+. ..+...+..+.+++++|.+
T Consensus        93 i~tp~~~h~~~~~~al~a-Gk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~~v~~~~R~~p~~~~~k~~i~~g~i  166 (357)
T 3ec7_A           93 ITASNEAHADVAVAALNA-NKYVFCEKPLAVTAADCQRVIEAEQKNGKRMVQIGFMRRYDKGYVQLKNIIDSGEI  166 (357)
T ss_dssp             ECSCGGGHHHHHHHHHHT-TCEEEEESSSCSSHHHHHHHHHHHHHHTSCCEEEECGGGGSHHHHHHHHHHHHTTT
T ss_pred             EcCCcHHHHHHHHHHHHC-CCCEEeecCccCCHHHHHHHHHHHHHhCCeEEEEeecccCCHHHHHHHHHHhcCCC
Confidence            999987777778888875 4556664221111111111    1122222  2333 2336678888889998887

>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}

Probab=94.28  E-value=0.1  Score=46.12  Aligned_cols=45  Identities=27%  Similarity=0.366  Sum_probs=36.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI  233 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l  233 (372)
                      .++.+||=+|+|. |..++.+++..+...|++++.++.-.+.+++.
T Consensus        45 ~~~~~VLDiGCG~-G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~   89 (292)
T 3g07_A           45 FRGRDVLDLGCNV-GHLTLSIACKWGPSRMVGLDIDSRLIHSARQN   89 (292)
T ss_dssp             TTTSEEEEESCTT-CHHHHHHHHHTCCSEEEEEESCHHHHHHHHHT
T ss_pred             cCCCcEEEeCCCC-CHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH
Confidence            3678999999864 78888999988666899999999888777653

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=94.25  E-value=0.11  Score=44.79  Aligned_cols=99  Identities=12%  Similarity=0.105  Sum_probs=62.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHH--HcC
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK--AMG  260 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~--~~~  260 (372)
                      .+++.+||=.|+|. |..++.+++......|++++.+++..+.+++    +|...+.....   +..    ++..  ...
T Consensus        78 ~~~~~~vLDiG~G~-G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~---d~~----~~~~~~~~~  149 (249)
T 3g89_A           78 WQGPLRVLDLGTGA-GFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWG---RAE----VLAREAGHR  149 (249)
T ss_dssp             CCSSCEEEEETCTT-TTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEEC---CHH----HHTTSTTTT
T ss_pred             cCCCCEEEEEcCCC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEEC---cHH----HhhcccccC
Confidence            35788888888642 5566667776544479999999998877654    56543322222   221    1110  012


Q ss_pred             CcceEEEeC-CCc-HHHHHHHHHHhccCCEEEEEc
Q 017426          261 TGIDVSFDC-AGL-NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       261 ~~~d~vid~-~g~-~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ..||+|+.. +.. ...++.+.+.|+++|+++.+.
T Consensus       150 ~~fD~I~s~a~~~~~~ll~~~~~~LkpgG~l~~~~  184 (249)
T 3g89_A          150 EAYARAVARAVAPLCVLSELLLPFLEVGGAAVAMK  184 (249)
T ss_dssp             TCEEEEEEESSCCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             CCceEEEECCcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence            579999863 222 345667778999999998764

>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}

Probab=94.25  E-value=0.48  Score=45.05  Aligned_cols=98  Identities=17%  Similarity=0.241  Sum_probs=62.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHHHcCCc
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~  262 (372)
                      ++|++||=.|||+ |..++++++.++ ...|++++.++++.+.+++    +|...+........++..    .   ....
T Consensus       116 ~~g~~VLDl~aGp-G~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~----~---~~~~  187 (479)
T 2frx_A          116 NAPQRVMDVAAAP-GSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGA----A---VPEM  187 (479)
T ss_dssp             CCCSEEEESSCTT-SHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHH----H---STTC
T ss_pred             CCCCEEEEeCCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhh----h---cccc
Confidence            3899988877643 566667777764 2379999999998876644    576544332222222211    1   1357


Q ss_pred             ceEEEe---CCCcH-------------------------HHHHHHHHHhccCCEEEEEc
Q 017426          263 IDVSFD---CAGLN-------------------------KTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       263 ~d~vid---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ||.|+-   |+|..                         ..+..+++.|+++|+++...
T Consensus       188 fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysT  246 (479)
T 2frx_A          188 FDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYST  246 (479)
T ss_dssp             EEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEec
Confidence            999985   54421                         24566788999999988653

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=94.25  E-value=0.37  Score=41.76  Aligned_cols=87  Identities=11%  Similarity=0.109  Sum_probs=57.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH-hCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          191 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      -+|.|+|+|.+|...++.+...|.+.|.+.++++++.+.+.+ +|....   .+    +.+    .    -...|+||.+
T Consensus        11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~---~~----~~~----~----~~~~Dvvi~a   75 (266)
T 3d1l_A           11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYT---TD----LAE----V----NPYAKLYIVS   75 (266)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEE---SC----GGG----S----CSCCSEEEEC
T ss_pred             CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCcee---CC----HHH----H----hcCCCEEEEe
Confidence            479999999999999888888898657788888887776544 475321   11    110    1    2468999999


Q ss_pred             CCcHHHHHHHHHHhc----cCCEEEEEc
Q 017426          270 AGLNKTMSTALGATC----AGGKVCLVG  293 (372)
Q Consensus       270 ~g~~~~~~~~~~~l~----~~G~~v~~g  293 (372)
                      +... .....+..+.    ++..++.++
T Consensus        76 v~~~-~~~~v~~~l~~~~~~~~ivv~~s  102 (266)
T 3d1l_A           76 LKDS-AFAELLQGIVEGKREEALMVHTA  102 (266)
T ss_dssp             CCHH-HHHHHHHHHHTTCCTTCEEEECC
T ss_pred             cCHH-HHHHHHHHHHhhcCCCcEEEECC
Confidence            9975 3455544443    444455553

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=94.23  E-value=0.3  Score=43.64  Aligned_cols=96  Identities=14%  Similarity=0.126  Sum_probs=62.5

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc-CCCeEEEEecChhHHHHHHHh-CCC---eEEecCCCcccHHHHHHHHHHHcCCcceE
Q 017426          191 TNVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEI-GAD---NIVKVSTNLQDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~~~~~l-g~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~d~  265 (372)
                      .+||++|+|. |.++..+++.. +. .+++++.+++-.+.+++. +..   .+...   ..|..+.+...   ..+.||+
T Consensus        91 ~rVLdIG~G~-G~la~~la~~~p~~-~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~---~~Da~~~l~~~---~~~~fDv  162 (317)
T 3gjy_A           91 LRITHLGGGA-CTMARYFADVYPQS-RNTVVELDAELARLSREWFDIPRAPRVKIR---VDDARMVAESF---TPASRDV  162 (317)
T ss_dssp             CEEEEESCGG-GHHHHHHHHHSTTC-EEEEEESCHHHHHHHHHHSCCCCTTTEEEE---ESCHHHHHHTC---CTTCEEE
T ss_pred             CEEEEEECCc-CHHHHHHHHHCCCc-EEEEEECCHHHHHHHHHhccccCCCceEEE---ECcHHHHHhhc---cCCCCCE
Confidence            3999998753 67777888865 55 799999999999988764 321   11111   12333322221   2467999


Q ss_pred             EEeCC-C---------cHHHHHHHHHHhccCCEEEEEcC
Q 017426          266 SFDCA-G---------LNKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       266 vid~~-g---------~~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      ||-.. .         ..+.++.+.+.|+++|.++....
T Consensus       163 Ii~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~  201 (317)
T 3gjy_A          163 IIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG  201 (317)
T ss_dssp             EEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence            98522 1         13467889999999999887643

>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A

Probab=94.20  E-value=0.21  Score=42.97  Aligned_cols=95  Identities=19%  Similarity=0.242  Sum_probs=63.7

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC---CCe--EEecCCCcccHHHHHHHHHHHc
Q 017426          185 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG---ADN--IVKVSTNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       185 ~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg---~~~--v~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      ..++++.+||-.|+|. |..+..+++. +. .+++++.+++..+.+++.-   ...  ++..+.  .++.     +   .
T Consensus        35 ~~~~~~~~vLDiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~--~~~~-----~---~  101 (263)
T 2yqz_A           35 HPKGEEPVFLELGVGT-GRIALPLIAR-GY-RYIALDADAAMLEVFRQKIAGVDRKVQVVQADA--RAIP-----L---P  101 (263)
T ss_dssp             CCSSSCCEEEEETCTT-STTHHHHHTT-TC-EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCT--TSCC-----S---C
T ss_pred             cCCCCCCEEEEeCCcC-CHHHHHHHHC-CC-EEEEEECCHHHHHHHHHHhhccCCceEEEEccc--ccCC-----C---C
Confidence            3578899999998754 6667777765 65 7999999999888877641   111  121111  1110     0   1


Q ss_pred             CCcceEEEeCCC------cHHHHHHHHHHhccCCEEEEE
Q 017426          260 GTGIDVSFDCAG------LNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       260 ~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~  292 (372)
                      .+.+|+|+....      ....+..+.+.|+|+|.++..
T Consensus       102 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~  140 (263)
T 2yqz_A          102 DESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG  140 (263)
T ss_dssp             TTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence            357999986432      235677889999999998876

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=94.20  E-value=0.33  Score=41.21  Aligned_cols=96  Identities=17%  Similarity=0.145  Sum_probs=64.0

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceE
Q 017426          186 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       186 ~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~  265 (372)
                      .++++.+||=+|+|. |..+..+++. |. .+++++.+++..+.+++.  ..++.     .+..+.+..+   ..+.+|+
T Consensus        38 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~--~~~~~-----~d~~~~~~~~---~~~~fD~  104 (240)
T 3dli_A           38 YFKGCRRVLDIGCGR-GEFLELCKEE-GI-ESIGVDINEDMIKFCEGK--FNVVK-----SDAIEYLKSL---PDKYLDG  104 (240)
T ss_dssp             GTTTCSCEEEETCTT-THHHHHHHHH-TC-CEEEECSCHHHHHHHHTT--SEEEC-----SCHHHHHHTS---CTTCBSE
T ss_pred             hhcCCCeEEEEeCCC-CHHHHHHHhC-CC-cEEEEECCHHHHHHHHhh--cceee-----ccHHHHhhhc---CCCCeeE
Confidence            367889999998753 5556666665 77 589999999988888775  22222     2222221111   2467999


Q ss_pred             EEeC-----CCc---HHHHHHHHHHhccCCEEEEEcC
Q 017426          266 SFDC-----AGL---NKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       266 vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      |+..     ...   ...+..+.+.|+|+|.++....
T Consensus       105 i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  141 (240)
T 3dli_A          105 VMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESP  141 (240)
T ss_dssp             EEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEE
T ss_pred             EEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            9863     232   3567788999999999887643

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=94.19  E-value=0.023  Score=48.53  Aligned_cols=75  Identities=20%  Similarity=0.285  Sum_probs=44.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~-~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      +.++||+|+ |.+|..+++.+...|.. .|+++++++++.+....-++. .+..|-.+.   +.+.+.    -.++|++|
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~-~~~~D~~d~---~~~~~~----~~~~d~vi   89 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVN-QEVVDFEKL---DDYASA----FQGHDVGF   89 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCE-EEECCGGGG---GGGGGG----GSSCSEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCce-EEecCcCCH---HHHHHH----hcCCCEEE
Confidence            568999997 99999999998888971 366666665443211111221 222221111   112222    14799999


Q ss_pred             eCCCc
Q 017426          268 DCAGL  272 (372)
Q Consensus       268 d~~g~  272 (372)
                      ++.|.
T Consensus        90 ~~ag~   94 (242)
T 2bka_A           90 CCLGT   94 (242)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99885

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=94.19  E-value=0.1  Score=47.19  Aligned_cols=70  Identities=16%  Similarity=0.268  Sum_probs=44.2

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          188 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       188 ~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .++.+|||+|+ |.+|..+++.+...|.+ |+++++++.+      .+...+ ..+-.+   .+.+.+..    .++|+|
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~-V~~~~r~~~~------~~~~~~-~~Dl~d---~~~~~~~~----~~~d~v   81 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRT-VRGFDLRPSG------TGGEEV-VGSLED---GQALSDAI----MGVSAV   81 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCC-EEEEESSCCS------SCCSEE-ESCTTC---HHHHHHHH----TTCSEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCE-EEEEeCCCCC------CCccEE-ecCcCC---HHHHHHHH----hCCCEE
Confidence            45678999998 99999999999999985 6777676554      233322 222221   12343333    379999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      |.+.+.
T Consensus        82 ih~A~~   87 (347)
T 4id9_A           82 LHLGAF   87 (347)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            988753

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=94.17  E-value=0.12  Score=45.91  Aligned_cols=69  Identities=12%  Similarity=0.116  Sum_probs=45.6

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      .+|||+|+ |.+|..+++.+...|. .|+++++++.+.+ ++  +.. ++..+   -. .+.+.+..    .++|+||.+
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~--~~~-~~~~D---l~-~~~~~~~~----~~~d~Vih~   69 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGNKA-IN--DYE-YRVSD---YT-LEDLINQL----NDVDAVVHL   69 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC--------CCE-EEECC---CC-HHHHHHHT----TTCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCccc-CC--ceE-EEEcc---cc-HHHHHHhh----cCCCEEEEc
Confidence            58999998 9999999999999998 5777777755544 33  333 22222   22 44455543    489999998


Q ss_pred             CCc
Q 017426          270 AGL  272 (372)
Q Consensus       270 ~g~  272 (372)
                      .+.
T Consensus        70 a~~   72 (311)
T 3m2p_A           70 AAT   72 (311)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            764

>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A

Probab=94.16  E-value=0.17  Score=46.05  Aligned_cols=132  Identities=14%  Similarity=0.115  Sum_probs=75.2

Q ss_pred             EEEEECCCHHHH-HHHHHHHHc-CCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          192 NVLIMGAGPIGL-VTMLAARAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       192 ~vlI~Gag~~G~-~ai~l~~~~-g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      +|.|+|+|.+|. ..+..++.. +++.+.+++++ ...+++++++...+..+.    ++.    ++..  ...+|+|+.|
T Consensus         4 rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~~~~~~~~~~~~----~~~----~ll~--~~~~D~V~i~   72 (349)
T 3i23_A            4 KMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAAPFKEKGVNFTA----DLN----ELLT--DPEIELITIC   72 (349)
T ss_dssp             EEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHHHHHTTTCEEES----CTH----HHHS--CTTCCEEEEC
T ss_pred             EEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHHhhCCCCCeEEC----CHH----HHhc--CCCCCEEEEe
Confidence            688999999998 677766554 66544455554 445566665432222222    222    2322  3579999999


Q ss_pred             CCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchh----hhccCcEEE-ee-ccCCCcHHHHHHHHHcCCC
Q 017426          270 AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDVV-GV-FRYKNTWPLCLELLRSGKI  335 (372)
Q Consensus       270 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i~-~~-~~~~~~~~~~~~ll~~g~~  335 (372)
                      +....+.+.+..+|.. |+.+.+.-......-....    .-.+++.+. +. ..+...+..+.+++++|.+
T Consensus        73 tp~~~h~~~~~~al~a-Gk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~i  143 (349)
T 3i23_A           73 TPAHTHYDLAKQAILA-GKSVIVEKPFCDTLEHAEELFALGQEKGVVVMPYQNRRFDGDYLAMKQVVEQGFL  143 (349)
T ss_dssp             SCGGGHHHHHHHHHHT-TCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHHTTT
T ss_pred             CCcHHHHHHHHHHHHc-CCEEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhcCCC
Confidence            9987777888888874 5666664211110111111    112233222 22 2235667888888988877

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	372
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	2e-35
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	4e-34
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	7e-31
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	4e-27
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	5e-24
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	7e-24
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	4e-23
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	5e-22
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	4e-20
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	6e-20
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	2e-19
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	2e-18
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	2e-18
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	2e-18
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	5e-18
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	9e-18
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	3e-17
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	1e-16
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	1e-14
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	3e-14
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	7e-14
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	3e-13
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	4e-11
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	1e-10
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	2e-10
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	2e-10
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	2e-10
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	2e-10
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	3e-10
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	5e-10
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	4e-09
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	2e-08
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	5e-08
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	2e-07
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	4e-06
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	1e-05
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	2e-05
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	5e-05
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	5e-05
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	2e-04
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	7e-04
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	0.001
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	0.001
d1u2za_	406	c.66.1.31 (A:) Catalytic, N-terminal domain of his	0.003
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	0.003

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (314), Expect = 2e-35
 Identities = 78/173 (45%), Positives = 112/173 (64%), Gaps = 2/173 (1%)

Query: 164 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD 223
           V+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+VT+L A+A GA ++V+ D+ 
Sbjct: 1   VTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLS 60

Query: 224 DYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGAT 283
             RLS AKEIGAD ++++S           + Q  +G   +V+ +C G   ++   + AT
Sbjct: 61  ATRLSKAKEIGADLVLQISKESPQEIARKVEGQ--LGCKPEVTIECTGAEASIQAGIYAT 118

Query: 284 CAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKID 336
            +GG + LVG+G    TVPL  AA+REVD+ GVFRY NTWP+ + +L S  ++
Sbjct: 119 RSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVN 171

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (307), Expect = 4e-34
 Identities = 76/185 (41%), Positives = 103/185 (55%), Gaps = 10/185 (5%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct: 8   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
           GHE +G +EKVGS VK L PGDRV         +EPG      + CK GRYNL P + F 
Sbjct: 68  GHEASGTVEKVGSSVKHLKPGDRVA--------IEPGAPRENDEFCKMGRYNLSPSIFFC 119

Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
           ATPP  G+L     H A  C+KLPDNV         PL   + A      G    +++  
Sbjct: 120 ATPPDDGNLCRFYKHNAAFCYKLPDNVKPLV-THRFPLEKALEAFETFKKGLGLKIML-K 177

Query: 198 AGPIG 202
             P  
Sbjct: 178 CDPSD 182

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score =  113 bits (283), Expect = 7e-31
 Identities = 81/171 (47%), Positives = 113/171 (66%), Gaps = 1/171 (0%)

Query: 164 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD 223
           VSLEEGA+ EPLSVGVHACRRA +   T VL++GAGPIGLV++LAA+A+GA  +      
Sbjct: 1   VSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTAR-S 59

Query: 224 DYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGAT 283
             RL VAK  GAD  + V    ++ +  +E+I+ A+G   +V+ DC+G  K ++  +  T
Sbjct: 60  PRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINIT 119

Query: 284 CAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGK 334
             GG + LVGMG   +TVPL  A  RE+D+  VFRY N +P+ LE++ SG+
Sbjct: 120 RTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASGR 170

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score =  103 bits (258), Expect = 4e-27
 Identities = 81/182 (44%), Positives = 109/182 (59%), Gaps = 9/182 (4%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++A L   N L+++   +P     +VL++M  VGICGSDVHY +  R ADF+VK+PMVI
Sbjct: 2   NLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 61

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
           GHE +G + KVG  VK         L  GDRVA+EPG+ C RC  CK G+YNLCP++ F 
Sbjct: 62  GHEASGTVVKVGKNVK--------HLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC 113

Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIM 196
           ATPP  G+LA   VH AD C KLPDN ++++       L   V A   A    +  + +M
Sbjct: 114 ATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVM 173

Query: 197 GA 198
            +
Sbjct: 174 IS 175

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 96.1 bits (238), Expect = 5e-24
 Identities = 43/216 (19%), Positives = 73/216 (33%), Gaps = 35/216 (16%)

Query: 18  NMAAWLLGVNTLKIQPFELPSL-------GPYDVLVRMKAVGICGSDVHYLKTLRCADFV 70
           N     LG   +++Q  + P +         + V++++ +  ICGSD H ++    A   
Sbjct: 2   NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQVG 61

Query: 71  VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNL 130
           +     I            +        D   L  GD V++   ++C RC  CK     +
Sbjct: 62  LVLGHEI------------TGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGV 109

Query: 131 CPEMK---------FFATPPVHGSLANQVVHPAD--LCFKLPDNVS-LEEGAMCEPLSVG 178
           C  +          +       G  A  V+ P       KLPD    +E+  + E + V 
Sbjct: 110 CLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQ 169

Query: 179 VHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA 214
           V +   A  G         AG      +   + F A
Sbjct: 170 VISLDDAPRGYG----EFDAGVPKKFVIDPHKTFSA 201

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 95.3 bits (236), Expect = 7e-24
 Identities = 35/180 (19%), Positives = 67/180 (37%), Gaps = 16/180 (8%)

Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
              K   ++      +D+ ++++A G+CGSD+H           +K P+V+GHE  G + 
Sbjct: 19  KNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCA---AGHWGNMKMPLVVGHEIVGKVV 75

Query: 87  KVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV---- 142
           K+G +  + +   +   V           SC  CD CK      C +     + P     
Sbjct: 76  KLGPKSNSGLKVGQRVGVGAQV------FSCLECDRCKNDNEPYCTKFVTTYSQPYEDGY 129

Query: 143 --HGSLANQVVHPADLCFKLPDNVSLEEGAMCEP-LSVGVHACRRANIGPETNVLIMGAG 199
              G  AN V         +P+N+ +E   + E  +        + ++     ++     
Sbjct: 130 VSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERMEKGDVRYRFTLVGYDKE 189

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 93.4 bits (231), Expect = 4e-23
 Identities = 36/187 (19%), Positives = 64/187 (34%), Gaps = 24/187 (12%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L ++   +     ++V +++ A GICGSD              K P+++GHE  GV+E +
Sbjct: 21  LSLETITVAPPKAHEVRIKILASGICGSDSSV----LKEIIPSKFPVILGHEAVGVVESI 76

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 148
           G+            + PGD+V       C  C  CK    N C +    A   +   + +
Sbjct: 77  GA--------GVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTS 128

Query: 149 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGV------------HACRRANIGPETNVLIM 196
           +        + L    +  E  +   ++V                     I     +L  
Sbjct: 129 RFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLTLDQINKAFELLSS 188

Query: 197 GAGPIGL 203
           G G   +
Sbjct: 189 GQGVRSI 195

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 90.3 bits (223), Expect = 5e-22
 Identities = 46/176 (26%), Positives = 72/176 (40%), Gaps = 20/176 (11%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L  + FE+  +    +LV + + G+CGSDVH     R  D  V  P+++GHE AG + +V
Sbjct: 17  LVYKEFEISDIPRGSILVEILSAGVCGSDVHM---FRGEDPRVPLPIILGHEGAGRVVEV 73

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCK-GGRYNLCPEMKFF-------ATP 140
             E + L         PGD +    GI+C  C  CK      LCP  K +         P
Sbjct: 74  NGEKRDLNGELL---KPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYP 130

Query: 141 PVHGSLANQ-VVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLI 195
            + G  ++  V+ P     K+ + ++        PL     A           V++
Sbjct: 131 HLRGCYSSHIVLDPETDVLKVSEKITHR-----LPLKEANKALELMESREALKVIL 181

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 84.6 bits (208), Expect = 4e-20
 Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 12/169 (7%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+I+  ++P  GP  VLV+++A G+C +D+H  +           P + GHE  G +  V
Sbjct: 18  LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAE--GDWPVKPPLPFIPGHEGVGYVAAV 75

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 148
           GS V  +  GDRV +            +C  C+HC  G   LC   +      V+G  A 
Sbjct: 76  GSGVTRVKEGDRVGIPW-------LYTACGCCEHCLTGWETLCESQQNT-GYSVNGGYAE 127

Query: 149 QVVHPADLCFKLPDNVSLEEGA-MCEPLSVGVHACRRANIGPETNVLIM 196
            V+   +    LP NV         + ++  +   R   I     VL M
Sbjct: 128 YVLADPNYVGILPKNVKATIHPGKLDDINQILDQMRAGQIEGRI-VLEM 175

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 83.9 bits (206), Expect = 6e-20
 Identities = 52/169 (30%), Positives = 75/169 (44%), Gaps = 12/169 (7%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           LKI+  E P++   +VLVR+KA G+C +D+H            K P++ GHE  G++E+V
Sbjct: 13  LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH--GDWPVKPKLPLIPGHEGVGIVEEV 70

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 148
           G  V  L  GDRV +            +C  CD+C  G+  LC   K      V G  A 
Sbjct: 71  GPGVTHLKVGDRVGIPW-------LYSACGHCDYCLSGQETLCEHQKNA-GYSVDGGYAE 122

Query: 149 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMG 197
                AD   K+PDN  +E     E ++       +  I     VL + 
Sbjct: 123 YCRAAADYVVKIPDNTIIEV-QPLEKINEVFDRMLKGQINGRV-VLTLE 169

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 83.4 bits (205), Expect = 2e-19
 Identities = 37/190 (19%), Positives = 65/190 (34%), Gaps = 33/190 (17%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  E+      ++ +++ A G+C +D+++L   +  D          HE AG++E V
Sbjct: 21  LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLG---HEGAGIVESV 77

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH----- 143
           G  V            PG++V       C  C  C+  + N C +     +P V      
Sbjct: 78  GPGVT--------EFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKET 129

Query: 144 ---------------GSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGVHAC-RRAN 186
                           + +   V       K+  +V L+E      PL     A     +
Sbjct: 130 RFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKH 189

Query: 187 IGPETNVLIM 196
                 VL +
Sbjct: 190 GKCIRTVLSL 199

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 80.3 bits (197), Expect = 2e-18
 Identities = 37/181 (20%), Positives = 63/181 (34%), Gaps = 39/181 (21%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  E+      +V +++ A  +C +D++              P+V+GHECAG++E V
Sbjct: 21  LCIEEIEVSPPKACEVRIQVIATCVCPTDINA----TDPKKKALFPVVLGHECAGIVESV 76

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV------ 142
           G  V            PGD+V       C RC  C     NLC +++ F  P +      
Sbjct: 77  GPGVT--------NFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELME 128

Query: 143 ------------------HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRR 184
                               S +   V       ++ D   L+        ++   +   
Sbjct: 129 DRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLV---THALPFESIND 185

Query: 185 A 185
           A
Sbjct: 186 A 186

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 80.0 bits (196), Expect = 2e-18
 Identities = 37/167 (22%), Positives = 58/167 (34%), Gaps = 19/167 (11%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+         GP DV + +   G+C SD+H    +R        P V GHE  G +  V
Sbjct: 13  LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQ---VRSEWAGTVYPCVPGHEIVGRVVAV 69

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL-- 146
           G +V+   PGD V +            SC  C+ C+ G  N C  M      P       
Sbjct: 70  GDQVEKYAPGDLVGVGC-------IVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGH 122

Query: 147 -----ANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIG 188
                + Q+V       ++       E    + ++       R ++ 
Sbjct: 123 TLGGYSQQIVVHERYVLRIRVA--DIEMIRADQINEAYERMLRGDVK 167

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 79.6 bits (195), Expect = 2e-18
 Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 17/174 (9%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVH-----YLKTLRCADFVVKEPMVIGHECAG 83
           L +Q   +P      VL++++A G+C SDVH     +       D  VK P+ +GHE AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72

Query: 84  VIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 143
            IE+VG         + V    GD VA+ P      C +C+ G  +LC   ++       
Sbjct: 73  KIEEVGD--------EVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGIN-FD 123

Query: 144 GSLANQVVHPA-DLCFKLPDNVSLEEGAM-CEPLSVGVHACRRANIGPETNVLI 195
           G+ A  V+ P     +KL     +    M  E  +  +             VLI
Sbjct: 124 GAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLENFKAIGRQ-VLI 176

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 79.1 bits (194), Expect = 5e-18
 Identities = 34/177 (19%), Positives = 63/177 (35%), Gaps = 34/177 (19%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  E+     ++V +++ A  +C +D +   TL  AD     P+++GH  AG++E V
Sbjct: 19  LSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHLGAGIVESV 75

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH----- 143
           G  V          L  GD V       C  C  C   + NLC +++      +      
Sbjct: 76  GEGVT--------KLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTS 127

Query: 144 ---------------GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRA 185
                           + +   V       K+   + ++E       ++      +A
Sbjct: 128 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFV---THNLSFDEINKA 181

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 78.1 bits (191), Expect = 9e-18
 Identities = 45/194 (23%), Positives = 67/194 (34%), Gaps = 24/194 (12%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
              +LG+N L     E P  G YD +VR  AV  C SD+H    +       ++ M++GH
Sbjct: 3   GFAMLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHT---VFEGALGDRKNMILGH 59

Query: 80  ECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF-- 137
           E  G + +VGS        +     PGDRV +      WR    + G       M     
Sbjct: 60  EAVGEVVEVGS--------EVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWK 111

Query: 138 ATPPVHGSLANQVVHPA--DLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLI 195
            +    G                 LP +V L +      +  G      A       +L+
Sbjct: 112 FSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTH--VYHGFDHIEEA-------LLL 162

Query: 196 MGAGPIGLVTMLAA 209
           M   P  L+  +  
Sbjct: 163 MKDKPKDLIKAVVI 176

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 76.9 bits (188), Expect = 3e-17
 Identities = 35/205 (17%), Positives = 67/205 (32%), Gaps = 19/205 (9%)

Query: 19  MAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           +AA         ++Q  ++      +VLV++ A G+C +D+               P V+
Sbjct: 5   IAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPL----PAVL 60

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 137
           GHE +G+IE +G  V  L  GD V L             C +C  C  G    C E    
Sbjct: 61  GHEGSGIIEAIGPNVTELQVGDHVVLSY---------GYCGKCTQCNTGNPAYCSEF--- 108

Query: 138 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRR--ANIGPETNVLI 195
                 G+ +            + ++    + +         +   +   +   +  V  
Sbjct: 109 FGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKF 168

Query: 196 MGAGPIGLVTMLAARAFGAPRIVIV 220
                I    + + +      I+ +
Sbjct: 169 YAFDEINQAAIDSRKGITLKPIIKI 193

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 74.7 bits (182), Expect = 1e-16
 Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 12/169 (7%)

Query: 29  LKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
           L+I+  + P L G +DV+VR+   G+C +D+H ++ +       K P  +GHE  G IE+
Sbjct: 12  LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEE 71

Query: 88  VGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 147
           V   V+ L  GD V         L P ++   C  C+ G    C  ++F       G  A
Sbjct: 72  VAEGVEGLEKGDPV--------ILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGF-A 122

Query: 148 NQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGVHACRRANIGPETNVLI 195
             +        KLP +V +E      + ++  +    +  +     VLI
Sbjct: 123 EFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERLEKGEVLGRA-VLI 170

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 69.9 bits (170), Expect = 1e-14
 Identities = 40/190 (21%), Positives = 63/190 (33%), Gaps = 40/190 (21%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H          V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHV----VSGTLVTPLPVIAGHEAAGIVESI 76

Query: 89  GSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH----- 143
           G            T+ PGD+V       C +C  CK    N C +               
Sbjct: 77  GE--------GVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTS 128

Query: 144 ---------------GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIG 188
                           + +   V       K+    +L      +PL   V    +  I 
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFAL------DPLITHVLPFEK--IN 180

Query: 189 PETNVLIMGA 198
              ++L  G 
Sbjct: 181 EGFDLLRSGE 190

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 68.3 bits (166), Expect = 3e-14
 Identities = 34/155 (21%), Positives = 63/155 (40%), Gaps = 19/155 (12%)

Query: 170 AMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV 229
            + + L  G H    A +GP + V + GAGP+GL    +AR  GA  +++ D++  RL+ 
Sbjct: 6   CLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAH 65

Query: 230 AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGL---------------NK 274
           AK  G +      +    + E++  +       +D + D  G                  
Sbjct: 66  AKAQGFEIA--DLSLDTPLHEQIAALL--GEPEVDCAVDAVGFEARGHGHEGAKHEAPAT 121

Query: 275 TMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVR 309
            +++ +  T   GK+ + G+   E    +  AA  
Sbjct: 122 VLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKI 156

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 66.8 bits (162), Expect = 7e-14
 Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 16/173 (9%)

Query: 173 EPLSVGVH-----ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRL 227
            PL  G+            + P ++ +  GAG +GL  +LAA+  GA  I+ VD+ + RL
Sbjct: 7   GPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRL 66

Query: 228 SVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGG 287
            +AK++GA +++   T      + V  I++    G++ + +  G  + +   + A    G
Sbjct: 67  ELAKQLGATHVINSKTQ-----DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILG 121

Query: 288 KVCLVGMGH--HEMTVPLTPAAVREVDVVGVF----RYKNTWPLCLELLRSGK 334
           K+ +VG           +    +    ++GV       K   P  + L + GK
Sbjct: 122 KIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGK 174

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 65.3 bits (158), Expect = 3e-13
 Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 5/145 (3%)

Query: 164 VSLEEGAM-CEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV 222
           + LE   M  + ++ G H    A+I   ++V+++G G +GL+ +  A+  GA RI+ V  
Sbjct: 1   MPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60

Query: 223 DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGA 282
               +  AK  GA +I     N ++   E + ++   G G+D      G ++T+S A+  
Sbjct: 61  RPICVEAAKFYGATDI----LNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKM 116

Query: 283 TCAGGKVCLVGMGHHEMTVPLTPAA 307
              GG +  +        + +    
Sbjct: 117 VKPGGIISNINYHGSGDALLIPRVE 141

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 59.2 bits (142), Expect = 4e-11
 Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 11/159 (6%)

Query: 183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 242
           + A +   +   + G G +GL  ++  +A GA RI+ VD++  + + AKE+GA   V   
Sbjct: 22  KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV--- 78

Query: 243 TNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTV 301
            N QD  + ++++   M   G+D SF+  G   TM TAL        V ++     +   
Sbjct: 79  -NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQN 137

Query: 302 PLTPAA--VREVDVVGV----FRYKNTWPLCLELLRSGK 334
                   +      G     F+ K++ P  +    + K
Sbjct: 138 LSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKK 176

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 57.9 bits (139), Expect = 1e-10
 Identities = 35/160 (21%), Positives = 64/160 (40%), Gaps = 10/160 (6%)

Query: 181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 240
           A   A + P +   + G G +G   ++  +A GA RI+ V     +   A E+GA   + 
Sbjct: 19  AVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECL- 77

Query: 241 VSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCA-GGKVCLVGMGHHE 298
              N +D  + + ++       G+D + +CAG  +TM  AL +T    G   ++G+    
Sbjct: 78  ---NPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPN 134

Query: 299 MTVPLTPAA-VREVDVVGVF---RYKNTWPLCLELLRSGK 334
             +PL P   +    + G              ++     K
Sbjct: 135 ERLPLDPLLLLTGRSLKGSVFGGFKGEEVSRLVDDYMKKK 174

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 57.6 bits (138), Expect = 2e-10
 Identities = 35/183 (19%), Positives = 70/183 (38%), Gaps = 5/183 (2%)

Query: 162 DNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD 221
           D++ +   AMC   +                V+I GAGP+GL  ++ AR+ GA  ++++ 
Sbjct: 1   DDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIA 60

Query: 222 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALG 281
               RL +A+EIGAD  +       +   +   +    G G D   +  G ++ +     
Sbjct: 61  GSPNRLKLAEEIGADLTLNRRETSVEERRK-AIMDITHGRGADFILEATGDSRALLEGSE 119

Query: 282 ATCAGGKVCLVGMGHHEMTVPLTPAA---VREVDVVGVFRY-KNTWPLCLELLRSGKIDV 337
               GG   + G+   +  VP        ++     G++    + +   + +       +
Sbjct: 120 LLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLL 179

Query: 338 KPL 340
             L
Sbjct: 180 SKL 182

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 56.9 bits (136), Expect = 2e-10
 Identities = 34/158 (21%), Positives = 68/158 (43%), Gaps = 7/158 (4%)

Query: 181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 240
           A   A + P +   + G G +GL  ++  +  GA RI+ +D++  +   AK +GA + + 
Sbjct: 20  AINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLN 79

Query: 241 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT 300
                + + + + ++      G+D S DCAG  +T+  A+  T  G   C V     +  
Sbjct: 80  PRELDKPVQDVITELTAG---GVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEM 136

Query: 301 VPLTPAAVREVDVVGVF----RYKNTWPLCLELLRSGK 334
              T   +    + G F    +  ++ P  +   ++ K
Sbjct: 137 TIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKK 174

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 56.9 bits (136), Expect = 2e-10
 Identities = 44/180 (24%), Positives = 71/180 (39%), Gaps = 17/180 (9%)

Query: 166 LEEGAMCEPLSVGVH-----ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV 220
           L++      L  G+      A   A + P +   + G G +GL  ++  +  GA RI+ V
Sbjct: 3   LDKVC---LLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGV 59

Query: 221 DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTAL 280
           D++  + + AKE GA   +      + I    E + +    G+D SF+C G  K M  AL
Sbjct: 60  DINKDKFARAKEFGATECINPQDFSKPI---QEVLIEMTDGGVDYSFECIGNVKVMRAAL 116

Query: 281 GATCAG-GKVCLVGMGHHEMTVPLTPAA-VREVDVVGVF----RYKNTWPLCLELLRSGK 334
            A   G G   +VG+      +   P   V      G      +   + P  +    S K
Sbjct: 117 EACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKK 176

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 57.0 bits (136), Expect = 2e-10
 Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 8/157 (5%)

Query: 183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 242
             A + P +   + G G +GL  ++   + GA RI+ VD++  +   AK  GA + V  +
Sbjct: 22  NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN 81

Query: 243 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVC-LVGMGHHEMTV 301
            + + I    + + K    G+D S +C G    M  AL +   G  V  LVG        
Sbjct: 82  DHSEPI---SQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVA 138

Query: 302 PLTPAAVREVDVVGV----FRYKNTWPLCLELLRSGK 334
                 +      G     F+ K+  P  ++     K
Sbjct: 139 TRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKK 175

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 56.5 bits (135), Expect = 3e-10
 Identities = 37/178 (20%), Positives = 70/178 (39%), Gaps = 13/178 (7%)

Query: 164 VSLEEGAMCEPLSVGV----HACRRA--NIGPETNVLIMGAGPIGLVTMLAARAFGAPRI 217
           +S E+     PL+        A ++A   + P   V I+G G +G + +   +      +
Sbjct: 1   ISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATV 60

Query: 218 VIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMS 277
           + +DV + +L +A+ +GAD++V    +          ++   G G++V+ D  G   T+ 
Sbjct: 61  IALDVKEEKLKLAERLGADHVVDARRDPVKQ-----VMELTRGRGVNVAMDFVGSQATVD 115

Query: 278 TALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGK 334
                    G++ +VG    E+  P       EV   G            + L   GK
Sbjct: 116 YTPYLLGRMGRLIIVGY-GGELRFPTIRVISSEVSFEGSLVGNYVELHELVTLALQGK 172

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 56.0 bits (134), Expect = 5e-10
 Identities = 28/147 (19%), Positives = 59/147 (40%), Gaps = 8/147 (5%)

Query: 175 LSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI 233
            S G  A  +   + P +  ++ G G +GL  ++  ++ GA RI+ +D++  +   A  +
Sbjct: 14  FSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV 73

Query: 234 GADNIVKVSTNLQDIAEEVEKIQKAMG-TGIDVSFDCAGLNKTMSTALGATCAGGKVC-L 291
           GA   +    + +D  + + ++   M    +  +F+  G  +TM  AL +         +
Sbjct: 74  GATECI----SPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVV 129

Query: 292 VGMGHHEMTVPLTP-AAVREVDVVGVF 317
           VG+      +   P          G  
Sbjct: 130 VGVPPSAKMLTYDPMLLFTGRTWKGCV 156

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 52.9 bits (126), Expect = 4e-09
 Identities = 23/180 (12%), Positives = 44/180 (24%), Gaps = 35/180 (19%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
              ++ ++      L    VL+++   GI   D    K            + I       
Sbjct: 14  DDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAG--- 70

Query: 85  IEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
                                          +    +  +    +      +       G
Sbjct: 71  -------------------------------TVVSSNDPRFAEGDEVIATSYELGVSRDG 99

Query: 145 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLV 204
            L+     P D    LP N+SL+E  + + L++           P     I+     G V
Sbjct: 100 GLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSL-EETPGALKDILQNRIQGRV 158

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 50.9 bits (120), Expect = 2e-08
 Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 11/174 (6%)

Query: 165 SLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV 222
           S EE A   C  ++    A +     P   V I G G +G V +  A+A G   +V VD+
Sbjct: 2   SFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMG-LNVVAVDI 59

Query: 223 DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGA 282
            D +L +AKE+GAD +V              K  K    G+  +   A       +A  +
Sbjct: 60  GDEKLELAKELGADLVVNPLKEDAA------KFMKEKVGGVHAAVVTAVSKPAFQSAYNS 113

Query: 283 TCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF-RYKNTWPLCLELLRSGKI 335
              GG   LVG+   EM +P+    +  + ++G     +      L+    GK+
Sbjct: 114 IRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKV 167

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 50.1 bits (118), Expect = 5e-08
 Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 11/173 (6%)

Query: 164 VSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD 221
           V   E A  +C  ++V     ++ N  P   V I G G +G V +  ARA G   +  +D
Sbjct: 1   VEFAEIAPILCAGVTV-YKGLKQTNARPGQWVAISGIGGLGHVAVQYARAMG-LHVAAID 58

Query: 222 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALG 281
           +DD +L +A+++GA   V          E+  +  +    G       A  N     A+G
Sbjct: 59  IDDAKLELARKLGASLTV------NARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIG 112

Query: 282 ATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG 333
               GG + LVG+   +   P+    ++ + + G     +      L+    G
Sbjct: 113 MARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGEG 165

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 48.3 bits (114), Expect = 2e-07
 Identities = 23/185 (12%), Positives = 39/185 (21%), Gaps = 40/185 (21%)

Query: 18  NMAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE 73
              A+++       T  +Q   +  L   DVLVR+    +   D                
Sbjct: 3   AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPF 62

Query: 74  PMVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE 133
              I          V S+      GD V                                
Sbjct: 63  VPGIDLAG----VVVSSQHPRFREGDEV---------------IATGYEIGVTH------ 97

Query: 134 MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAM-CEPLSVGVHACRRANIGPETN 192
                     G  +       +    LP  +      +    L   +    R  +   T 
Sbjct: 98  ---------FGGYSEYARLHGEWLVPLPKGLERIAQEISLAELPQALKRILRGELRGRT- 147

Query: 193 VLIMG 197
           V+ + 
Sbjct: 148 VVRLA 152

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.2 bits (103), Expect = 4e-06
 Identities = 35/175 (20%), Positives = 61/175 (34%), Gaps = 11/175 (6%)

Query: 164 VSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD 221
           +     A  +C  L+V      R   GP   V I+G G IG +  L ++A GA   VI  
Sbjct: 1   IPSHLAAPLLCGGLTV-YSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISR 59

Query: 222 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALG 281
               R   A ++GAD+         +  +  EK        +      +  +   +    
Sbjct: 60  SSRKR-EDAMKMGADHY----IATLEEGDWGEKYFDTFDLIVV--CASSLTDIDFNIMPK 112

Query: 282 ATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKI 335
           A   GG++  + +      + L P  ++ V +              L+L+    I
Sbjct: 113 AMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDI 167

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 42.6 bits (99), Expect = 1e-05
 Identities = 24/171 (14%), Positives = 41/171 (23%), Gaps = 38/171 (22%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP 74
           + A LL    G     +Q  +   L   DV V +    +   D   +        +   P
Sbjct: 1   LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAIT--GKGKIIRNFP 58

Query: 75  MVIGHECAGVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM 134
           M+ G + AG +                      R      +                   
Sbjct: 59  MIPGIDFAGTVRT----------------SEDPRFHAGQEVLLTGWGVG----------- 91

Query: 135 KFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRA 185
                    G LA Q     D    +P   + +E ++ E  +         
Sbjct: 92  -----ENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAIINNQ 137

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 42.7 bits (99), Expect = 2e-05
 Identities = 28/190 (14%), Positives = 63/190 (33%), Gaps = 20/190 (10%)

Query: 164 VSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGA--GPIGLVTMLAARAFGAPRIVI 219
           +++ +GA     PL+  +       + P  +  I       +G       +      I +
Sbjct: 1   LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISV 60

Query: 220 VDVD---DYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKT 275
           +      D  ++  KE+GA  ++     N ++    +++  K  G    ++ +C G  K+
Sbjct: 61  IRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVG-GKS 119

Query: 276 MSTALGATCAGGKVCLV-GMGHHEMTVPLTPAAVREVDVVGVF----------RYKNTWP 324
            +         G +    GM    +T+P +    +     G +             +T  
Sbjct: 120 STGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLN 179

Query: 325 LCLELLRSGK 334
             +     GK
Sbjct: 180 QIIAWYEEGK 189

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 41.3 bits (95), Expect = 5e-05
 Identities = 34/157 (21%), Positives = 64/157 (40%), Gaps = 6/157 (3%)

Query: 180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNI 238
            A R+A++ P   +L++GAG       +      +   +I           AK  GAD +
Sbjct: 18  RAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYV 77

Query: 239 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE 298
           +  S   QD   E+ +I ++ G    +  + +   KT+S    A    GK  +VG+   +
Sbjct: 78  INASM--QDPLAEIRRITESKGVDAVIDLNNS--EKTLSVYPKALAKQGKYVMVGLFGAD 133

Query: 299 MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGK 334
           +        + E+  VG     ++ +   + L  +GK
Sbjct: 134 LHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGK 170

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 42.1 bits (99), Expect = 5e-05
 Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 3/83 (3%)

Query: 192 NVLIMGAGP-IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE 250
            VL+ G    IG     A    GA  + + D+      VA+ IG         + ++   
Sbjct: 7   GVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVR 65

Query: 251 EVEKIQKAMGTGIDVSFDCAGLN 273
            VE+   A+G  +DV  + A + 
Sbjct: 66  FVEEAAYALG-RVDVLVNNAAIA 87

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 39.6 bits (91), Expect = 2e-04
 Identities = 29/156 (18%), Positives = 46/156 (29%), Gaps = 15/156 (9%)

Query: 167 EEGAMCEPLSVGV----HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV 222
           E+ A   PL           R    GP   V ++G G +G + +  A A GA  +     
Sbjct: 4   EQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTS 63

Query: 223 DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGA 282
           +  R   AK +GAD +         +         A     D   +       +      
Sbjct: 64  EAKR-EAAKALGADEV---------VNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTL 113

Query: 283 TCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF 317
               G + LVG        P     + +   + G  
Sbjct: 114 LKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSM 149

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 37.8 bits (86), Expect = 7e-04
 Identities = 18/183 (9%), Positives = 40/183 (21%), Gaps = 29/183 (15%)

Query: 26  VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI 85
           V   +    +  +L P +V+V+     +  SD++ ++ +  +              A   
Sbjct: 18  VLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPC- 76

Query: 86  EKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 145
                                           +          +L        +    G+
Sbjct: 77  ---------------------------GNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGT 109

Query: 146 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACR-RANIGPETNVLIMGAGPIGLV 204
                +   D   KLP+    +       L+             P   +   G       
Sbjct: 110 WRTHALGNDDDFIKLPNPAQSKANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDG 169

Query: 205 TML 207
             L
Sbjct: 170 KQL 172

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 36.5 bits (83), Expect = 0.001
 Identities = 26/174 (14%), Positives = 42/174 (24%), Gaps = 41/174 (23%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G   L+   F        ++ V  KA+GI                    P  +G E AG+
Sbjct: 11  GPEVLQAVEFTPADPAENEIQVENKAIGIN---FIDTYIRSGLYPPPSLPSGLGTEAAGI 67

Query: 85  IEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 144
           + KV                                    G R                 
Sbjct: 68  VSKV---------------------------GSGVKHIKAGDRVVYAQSALGA------- 93

Query: 145 SLANQVVHPADLCFKLPDNVSLEEG-AMCEPLSVGV--HACRRANIGPETNVLI 195
             ++     AD    LP  + ++       PL      H    +     +++LI
Sbjct: 94  -YSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLI 146

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (84), Expect = 0.001
 Identities = 30/174 (17%), Positives = 60/174 (34%), Gaps = 11/174 (6%)

Query: 165 SLEEGA-MCEPLSVGVHA-CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV 222
             ++GA +  P      A    A +    +VL+ GA     +           +I+    
Sbjct: 2   DFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG 61

Query: 223 DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGA 282
            +    +  + GA  +             ++KI+K +G            N  +S  L  
Sbjct: 62  TEEGQKIVLQNGAHEVFN-----HREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSL 116

Query: 283 TCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT---WPLCLELLRSG 333
              GG+V +VG     + +       +E  ++GV  + +T   +      L++G
Sbjct: 117 LSHGGRVIVVGSR-GTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAG 169

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 406

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.0 bits (85), Expect = 0.003
 Identities = 8/93 (8%), Positives = 26/93 (27%), Gaps = 3/93 (3%)

Query: 180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 239
              ++  +      + +G+G +G   + AA   G       ++ D    +      +   
Sbjct: 207 DVYQQCQLKKGDTFMDLGSG-VGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKK 265

Query: 240 KVSTNLQDIAEEVEKIQKAMGTG--IDVSFDCA 270
           +       +      ++K+      +       
Sbjct: 266 RCKLYGMRLNNVEFSLKKSFVDNNRVAELIPQC 298

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 35.7 bits (81), Expect = 0.003
 Identities = 29/165 (17%), Positives = 59/165 (35%), Gaps = 11/165 (6%)

Query: 178 GVHACRRANIGPE-TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 235
            VH   +  + PE  +VL+ GA G +G + +      G   +      +    + +   +
Sbjct: 11  SVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGAS 70

Query: 236 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGK-VCLVGM 294
           + I     + +D+ +   K           + D  G  K +++ L     GG        
Sbjct: 71  EVI-----SREDVYDGTLKAL--SKQQWQGAVDPVG-GKQLASLLSKIQYGGSVAVSGLT 122

Query: 295 GHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKP 339
           G  E+   + P  +R V ++G+        +   +      D+KP
Sbjct: 123 GGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSDLKP 167

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	372
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	100.0
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	100.0
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	100.0
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.98
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.98
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.98
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.97
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.97
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.97
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.97
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.97
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.97
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.96
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.96
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.96
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.96
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.96
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.95
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.95
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.95
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.93
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.92
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.92
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.92
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.91
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.91
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.91
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.91
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.91
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.9
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.9
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.9
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.9
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.89
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.89
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.89
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.89
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.89
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.88
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.88
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.88
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.88
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.87
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.87
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.87
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.87
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.86
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.86
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.85
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.84
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.78
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.77
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.57
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.56
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.37
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.98
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.88
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.75
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.61
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.6
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.57
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.42
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.4
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.37
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.36
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.35
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.34
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.33
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.33
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.27
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.26
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.26
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.26
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.23
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.17
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.14
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.13
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.12
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.12
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.11
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.08
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.07
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.06
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.06
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.06
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.05
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	96.98
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.97
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.97
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	96.97
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.92
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	96.92
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.9
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	96.89
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.89
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	96.86
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.86
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	96.84
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	96.83
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.82
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	96.8
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.77
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.75
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.74
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.73
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.69
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.66
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.66
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.64
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	96.62
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	96.62
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.62
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.62
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.61
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.61
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.6
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.59
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.58
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	96.57
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.56
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.56
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.55
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.53
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.53
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.52
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.51
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.51
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.46
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	96.33
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.28
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	96.28
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.26
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.24
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	96.24
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	96.21
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.2
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.2
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.15
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.01
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	95.98
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	95.97
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	95.96
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	95.96
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	95.93
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	95.86
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	95.82
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	95.77
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.69
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	95.61
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	95.58
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	95.56
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.44
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	95.42
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.39
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	95.35
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	95.31
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.24
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	95.24
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	95.18
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.18
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.14
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.93
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	94.81
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	94.79
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	94.78
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	94.76
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	94.71
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	94.63
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	94.59
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.54
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.47
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	94.42
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	94.38
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	94.36
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	94.33
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	94.28
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.26
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.19
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	94.13
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.05
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	94.0
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	93.92
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	93.87
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	93.73
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	93.69
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	93.64
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.59
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	93.31
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	93.28
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	93.25
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	93.08
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.08
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	92.96
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	92.95
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.95
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	92.92
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	92.92
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	92.91
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	92.78
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.78
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	92.77
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	92.67
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	92.67
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	92.63
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	92.55
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	92.54
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	92.49
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	92.4
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	92.3
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	92.28
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	92.21
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	92.18
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	92.17
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	92.09
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	92.07
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	92.05
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.0
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	91.95
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	91.79
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	91.76
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	91.71
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	91.7
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	91.69
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	91.66
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	91.37
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	91.36
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	91.32
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	91.18
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	91.18
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	91.05
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	90.91
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	90.9
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	90.9
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	90.88
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	90.84
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	90.77
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	90.65
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	90.58
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	90.31
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	90.3
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	90.3
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	90.27
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	90.22
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	90.16
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	90.08
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	90.07
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	89.96
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	89.87
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	89.87
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	89.77
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	89.75
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	89.74
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	89.73
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	89.71
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	89.57
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	89.35
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	89.33
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	89.29
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	89.26
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	89.12
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	89.09
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	89.07
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	89.05
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	88.83
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	88.63
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	88.57
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	88.39
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	88.28
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	88.2
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	88.2
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	88.2
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	88.19
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	88.16
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	88.04
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	87.94
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	87.84
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.76
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	87.66
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	87.45
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	87.25
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	87.25
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	87.24
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	87.14
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	87.14
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	87.1
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	87.05
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	86.95
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	86.87
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	86.86
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	86.82
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	86.71
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	86.64
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	86.61
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	86.6
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	86.47
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	86.33
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	86.23
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	86.09
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	86.0
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	86.0
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	85.69
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	85.66
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	85.66
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	85.63
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.35
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	85.22
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	85.19
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	84.43
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	84.31
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	84.27
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	84.23
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	84.07
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	84.03
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	84.02
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	83.96
d1yzha1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep	83.8
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.67
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	83.56
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	83.53
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	83.43
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	83.42
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	83.24
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	83.22
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	83.07
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	83.05
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	82.9
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	82.85
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	82.79
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	82.57
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	82.18
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	82.12
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	82.09
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	82.08
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	81.66
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	81.66
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	81.51
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	81.45
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	81.22
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	80.9
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	80.77
d1p3ha_	99	Chaperonin-10 (GroES) {Mycobacterium tuberculosis	80.61
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	80.61
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	80.59
d1vl6a1	222	Malate oxidoreductase (malic enzyme) {Thermotoga m	80.51

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=100.00  E-value=4.5e-37  Score=256.41  Aligned_cols=173  Identities=47%  Similarity=0.823  Sum_probs=161.8

Q ss_pred             ceeEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccc
Q 017426           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (372)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (372)
                      |+++++++++.|+++++|.|+|+++||||||+++|+|++|++.+.+.....+...+|.++|||++|+|+++|++|++|++
T Consensus         2 ~maAVl~g~~~l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~~   81 (178)
T d1e3ja1           2 NLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKK   81 (178)
T ss_dssp             CEEEEEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCT
T ss_pred             ceEEEEEcCCcEEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCCC
Confidence            57788889999999999999999999999999999999999999886655555678999999999999999999999999


Q ss_pred             cccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-hhH
Q 017426           98 GDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLS  176 (372)
Q Consensus        98 gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~~  176 (372)
                              ||||++.+...|+.|++|..++.++|++..+.+....+|+|+||+.+|+++++++|+++++++|+++. .+.
T Consensus        82 --------GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~  153 (178)
T d1e3ja1          82 --------GDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLE  153 (178)
T ss_dssp             --------TCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGG
T ss_pred             --------CCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHHHhHHH
Confidence                    99999999999999999999999999999999988889999999999999999999999999999885 788


Q ss_pred             HHHHHHHhcCCCCCCEEEEECC
Q 017426          177 VGVHACRRANIGPETNVLIMGA  198 (372)
Q Consensus       177 ~a~~~l~~~~~~~g~~vlI~Ga  198 (372)
                      |||++++.+++++|++|+|+|+
T Consensus       154 ta~~a~~~~~~~~g~~VlVig~  175 (178)
T d1e3ja1         154 QTVDAFEAARKKADNTIKVMIS  175 (178)
T ss_dssp             GHHHHHHHHHHCCTTCSEEEEE
T ss_pred             HHHHHHHHhCCCCCCEEEEEcc
Confidence            9999999999999999999864

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-35  Score=245.36  Aligned_cols=173  Identities=44%  Similarity=0.762  Sum_probs=158.6

Q ss_pred             cceeEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           17 VNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        17 ~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      .++++++++++.|+++++|.|+|+++||+|||.++|+|++|++.+++.+.+....++|.++|||++|+|+++|+++++|+
T Consensus         7 ~~~a~V~~gp~~l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~   86 (185)
T d1pl8a1           7 NNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLK   86 (185)
T ss_dssp             CCEEEEEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSCC
T ss_pred             CCEEEEEeCCCeEEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceeeec
Confidence            47899999999999999999999999999999999999999999987655545567899999999999999999999999


Q ss_pred             ccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccchhH
Q 017426           97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS  176 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~~  176 (372)
                      +        ||||++.+..+|+.|++|..++.++|.+...++....+|+|+||+.+++++++++|+++++++|+++ +++
T Consensus        87 ~--------GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~-pl~  157 (185)
T d1pl8a1          87 P--------GDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRF-PLE  157 (185)
T ss_dssp             T--------TCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEE-EGG
T ss_pred             c--------cccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHHHH-HHH
Confidence            9        9999999999999999999999999999999998888999999999999999999999999988764 566


Q ss_pred             HHHHHHHhcCCCCCCEEEEECCC
Q 017426          177 VGVHACRRANIGPETNVLIMGAG  199 (372)
Q Consensus       177 ~a~~~l~~~~~~~g~~vlI~Gag  199 (372)
                      +|+++++..++++|++||| |+|
T Consensus       158 ~a~~a~~~~~~~~G~~VlI-g~G  179 (185)
T d1pl8a1         158 KALEAFETFKKGLGLKIML-KCD  179 (185)
T ss_dssp             GHHHHHHHHHTTCCSEEEE-ECC
T ss_pred             HHHHHHHHhCCCCCCEEEE-EeC
Confidence            7888888888899999999 444

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=5.9e-33  Score=229.24  Aligned_cols=167  Identities=29%  Similarity=0.499  Sum_probs=150.2

Q ss_pred             eeEEEecCC-ceeEEEecCCCC-CCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           19 MAAWLLGVN-TLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        19 ~~~~~~~~~-~l~~~~~~~p~~-~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      ||+++.+.+ +|++++++.|++ +++||||||.++++|++|++.+.|.........+|.++|||++|+|+++|+++++|+
T Consensus         1 kA~~~~~~g~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~   80 (171)
T d1h2ba1           1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE   80 (171)
T ss_dssp             CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCC
T ss_pred             CEEEEEeCCCCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCC
Confidence            678888754 599999999986 689999999999999999999988654433457799999999999999999999999


Q ss_pred             ccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccccccc-chh
Q 017426           97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPL  175 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~-~~~  175 (372)
                      +        ||||++.+...|+.|..|..+..++|++...++. ..+|+|+||+.+++++++++|++++++.++++ .++
T Consensus        81 ~--------GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~  151 (171)
T d1h2ba1          81 K--------GDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEI  151 (171)
T ss_dssp             T--------TCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTT-TBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGH
T ss_pred             C--------CCEEEEcCccCCCCccccccccccccccccccee-ecccccceeeeehhhcceecCCCCCHHHHHHHHhHH
Confidence            9        9999999999999999999999999999888876 57899999999999999999999999877755 588


Q ss_pred             HHHHHHHHhcCCCCCCEEEE
Q 017426          176 SVGVHACRRANIGPETNVLI  195 (372)
Q Consensus       176 ~~a~~~l~~~~~~~g~~vlI  195 (372)
                      +|+|++++.+++ .|++|||
T Consensus       152 ~ta~~al~~~~~-~G~~VlI  170 (171)
T d1h2ba1         152 NDVLERLEKGEV-LGRAVLI  170 (171)
T ss_dssp             HHHHHHHHTTCC-SSEEEEE
T ss_pred             HHHHHHHHhcCC-CCCEEEe
Confidence            899999988888 8999998

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.98  E-value=1.1e-32  Score=229.00  Aligned_cols=167  Identities=27%  Similarity=0.462  Sum_probs=146.5

Q ss_pred             chhcceeEEEecCC-ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCC
Q 017426           14 GEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (372)
Q Consensus        14 ~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (372)
                      |.+++||+++.++. +|++++++.|.|+++||||||.++|||++|+++++|.+.   ..++|+++|||++|+|+++|++|
T Consensus         1 m~~k~kA~v~~~~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~---~~~~P~vlGHE~~G~V~~vG~~v   77 (184)
T d1vj0a1           1 MGLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDP---RVPLPIILGHEGAGRVVEVNGEK   77 (184)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCT---TCCSSBCCCCEEEEEEEEESSCC
T ss_pred             CCceEEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCC---ccccccccceeeeeeeeEEeccc
Confidence            45678999999764 699999999999999999999999999999999998653   24689999999999999999998


Q ss_pred             cc-----ccccccccCCCCCEEEEcCCcCCCCCccccCCC-CCCCCCccccccC-------CCCCcceeEEEec-CCceE
Q 017426           93 KT-----LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGR-YNLCPEMKFFATP-------PVHGSLANQVVHP-ADLCF  158 (372)
Q Consensus        93 ~~-----~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-------~~~g~~~e~~~v~-~~~~~  158 (372)
                      ++     +++        ||+|.+.++.+|++|.+|..++ +++|+++..+|..       ..+|+|+||+.++ +++++
T Consensus        78 ~~~~~~~~~~--------Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~  149 (184)
T d1vj0a1          78 RDLNGELLKP--------GDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVL  149 (184)
T ss_dssp             BCTTSCBCCT--------TCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEE
T ss_pred             cccccccccc--------eeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEE
Confidence            74     466        9999999999999999999998 4789999988753       3589999999996 57999


Q ss_pred             ECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEE
Q 017426          159 KLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIM  196 (372)
Q Consensus       159 ~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~  196 (372)
                      ++|+++++++     ++++|+++++++++++|++|||+
T Consensus       150 ~ip~~l~~~~-----pl~~A~~a~~~~~~~~G~~VlI~  182 (184)
T d1vj0a1         150 KVSEKITHRL-----PLKEANKALELMESREALKVILY  182 (184)
T ss_dssp             EECTTCCEEE-----EGGGHHHHHHHHHHTSCSCEEEE
T ss_pred             ECCCCCCHHH-----HHHHHHHHHHHhCCCcCCEEEEe
Confidence            9999999753     45678888999999999999997

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.98  E-value=3e-32  Score=226.38  Aligned_cols=172  Identities=28%  Similarity=0.377  Sum_probs=150.4

Q ss_pred             cchhcceeEEEecCC-ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCC
Q 017426           13 DGEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (372)
Q Consensus        13 ~~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (372)
                      ++|.+|||+++.+++ +++++++|.|.|+++||||||.++|+|++|++.+.|.+..  ...+|.++|||++|+|+++|++
T Consensus         1 ~~P~tMkA~v~~~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~--~~~~P~i~GhE~~G~V~~~G~~   78 (175)
T d1llua1           1 TLPQTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPV--KPPLPFIPGHEGVGYVAAVGSG   78 (175)
T ss_dssp             CCCSEEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSS--CCCSSBCCCSCEEEEEEEECTT
T ss_pred             CcchhcEEEEEEeCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccc--cccCCcCCCCcceEEEEEeCCC
Confidence            467889999999875 5999999999999999999999999999999999986532  2467999999999999999999


Q ss_pred             CccccccccccCCCCCEEEEcC-CcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccccc
Q 017426           92 VKTLVPGDRVTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA  170 (372)
Q Consensus        92 v~~~~~gd~v~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa  170 (372)
                      |++|++        ||||.+.+ ...|+.|.+|..++.++|.+...++. ..+|+|+||+.+++++++++|+++++..++
T Consensus        79 v~~~~~--------GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~-~~~gg~aey~~v~~~~~~~iPd~l~~~~a~  149 (175)
T d1llua1          79 VTRVKE--------GDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGY-SVNGGYAEYVLADPNYVGILPKNVKATIHP  149 (175)
T ss_dssp             CCSCCT--------TCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEECTTTSEECCTTCCCCEEE
T ss_pred             cccccc--------CCEEEeccccccCCccccccCCccccccccccccc-ccccccceEEEechHHEEECCCCCChhHHH
Confidence            999999        99998764 45699999999999999999888876 578999999999999999999999988777


Q ss_pred             ccc-hhHHHHHHHHhcCCCCCCEEEEE
Q 017426          171 MCE-PLSVGVHACRRANIGPETNVLIM  196 (372)
Q Consensus       171 ~~~-~~~~a~~~l~~~~~~~g~~vlI~  196 (372)
                      .+. .+.++++.++.+.+ +|++|||+
T Consensus       150 ~~~~~~~t~~~~~~~g~~-~G~~VLVl  175 (175)
T d1llua1         150 GKLDDINQILDQMRAGQI-EGRIVLEM  175 (175)
T ss_dssp             ECGGGHHHHHHHHHTTCC-SSEEEEEC
T ss_pred             HHHhHHHHHHHHHHhCCC-CCCEEEeC
Confidence            554 66778877766554 69999984

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.98  E-value=4e-32  Score=229.83  Aligned_cols=171  Identities=23%  Similarity=0.274  Sum_probs=150.3

Q ss_pred             hhcceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCc
Q 017426           15 EEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (372)
Q Consensus        15 ~~~~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (372)
                      .+++||+++..+ .++++++++.|.|+++||+|||.++|+|++|++.+.|...   ...+|.++|||++|+|+++|++++
T Consensus         6 ~~~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~---~~~~p~i~GhE~~G~v~~vG~~v~   82 (199)
T d1cdoa1           6 VIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKH---KDGFPVVLGHEGAGIVESVGPGVT   82 (199)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCC---TTSCSEECCCCEEEEEEEECTTCC
T ss_pred             ceEEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhccc---ccccccccccccceEEEEEcCCCc
Confidence            456789998876 4799999999999999999999999999999999988543   246799999999999999999999


Q ss_pred             cccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCC--------------------CCCcceeEEEec
Q 017426           94 TLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP--------------------VHGSLANQVVHP  153 (372)
Q Consensus        94 ~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~g~~~e~~~v~  153 (372)
                      +|++        ||||.+.+..+|+.|++|..++.++|++........                    ..|+|+||+.++
T Consensus        83 ~~~~--------GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~  154 (199)
T d1cdoa1          83 EFQP--------GEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVN  154 (199)
T ss_dssp             SCCT--------TCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEE
T ss_pred             eecC--------CCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEc
Confidence            9999        999999999999999999999999998754432211                    149999999999


Q ss_pred             CCceEECCCCCCcccccccc-hhHHHHHHHHh-cCCCCCCEEEEE
Q 017426          154 ADLCFKLPDNVSLEEGAMCE-PLSVGVHACRR-ANIGPETNVLIM  196 (372)
Q Consensus       154 ~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~g~~vlI~  196 (372)
                      +++++++|+++++++++++. ++.|++.+++. .+.+.|++|||+
T Consensus       155 ~~~~~~iP~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         155 QIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             GGGEEECCTTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             hHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            99999999999999988776 78899999975 678899999984

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.97  E-value=5.5e-32  Score=227.43  Aligned_cols=169  Identities=22%  Similarity=0.336  Sum_probs=143.6

Q ss_pred             hcceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           16 EVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        16 ~~~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      .+|+|+++... ++|+++++|.|+|+++||||||.++|+|++|++++.|.+.    .++|.++|||++|+|+++|++|++
T Consensus         2 k~~~Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~----~~~P~i~GHE~~G~V~~vG~~v~~   77 (194)
T d1f8fa1           2 KDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP----VPLPAVLGHEGSGIIEAIGPNVTE   77 (194)
T ss_dssp             EEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC----CCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             ceeEEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhccc----ccCCcccccceEEEeeecCcccee
Confidence            45789998865 5799999999999999999999999999999999987543    468999999999999999999999


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCC----------------------CCCcceeEEEe
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP----------------------VHGSLANQVVH  152 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~g~~~e~~~v  152 (372)
                      |++        ||||+.. ..+|++|.+|..+++++|++.....+..                      ..|+|+||+.+
T Consensus        78 ~~v--------GDrVv~~-~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v  148 (194)
T d1f8fa1          78 LQV--------GDHVVLS-YGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALS  148 (194)
T ss_dssp             CCT--------TCEEEEC-CCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEE
T ss_pred             Ecc--------Cceeeee-cccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEE
Confidence            999        9999554 5589999999999999998753322110                      13799999999


Q ss_pred             cCCceEECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Q 017426          153 PADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV  220 (372)
Q Consensus       153 ~~~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v  220 (372)
                      ++.+++++|++++++++                       ++|.|+|.+|++++|+++.+|+..++++
T Consensus       149 ~~~~~~~ip~~i~~~~~-----------------------~~i~g~g~~g~~aiq~a~~~g~~~iiaV  193 (194)
T d1f8fa1         149 RENNTVKVTKDFPFDQL-----------------------VKFYAFDEINQAAIDSRKGITLKPIIKI  193 (194)
T ss_dssp             EGGGEEEECTTCCGGGG-----------------------EEEEEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred             ehHHEEECCCCCCcccE-----------------------EEEeCcHHHHHHHHHHHHHcCCCEEEEe
Confidence            99999999998886544                       4456779999999999999999777664

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.97  E-value=7.5e-32  Score=229.06  Aligned_cols=168  Identities=24%  Similarity=0.350  Sum_probs=145.6

Q ss_pred             hhcceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCc
Q 017426           15 EEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (372)
Q Consensus        15 ~~~~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (372)
                      +++|||+++.++ .+++++++|.|.|+++||||||.++|+|++|+++++|.+.    ..+|.++|||++|+|+++|++|+
T Consensus         6 ~~~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~----~~~P~v~GHE~~G~V~~vG~~V~   81 (202)
T d1e3ia1           6 VIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKK----ALFPVVLGHECAGIVESVGPGVT   81 (202)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSC----CCSSBCCCCEEEEEEEEECTTCC
T ss_pred             eEEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeecc----cccccccccccceEEeeecCCce
Confidence            347999999977 4699999999999999999999999999999999987543    46799999999999999999999


Q ss_pred             cccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC------------------------CCCCcceeE
Q 017426           94 TLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------------------------PVHGSLANQ  149 (372)
Q Consensus        94 ~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~g~~~e~  149 (372)
                      +|++        ||||++.+...|+.|++|..++.++|++...++..                        ...|+|+||
T Consensus        82 ~~~~--------GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey  153 (202)
T d1e3ia1          82 NFKP--------GDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQY  153 (202)
T ss_dssp             SCCT--------TCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSE
T ss_pred             eccC--------CCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEE
Confidence            9999        99999999999999999999999999887666531                        124899999


Q ss_pred             EEecCCceEECCCCCCcccccccc-hhHHHHHHHHhcCCCCCCEEEEE
Q 017426          150 VVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACRRANIGPETNVLIM  196 (372)
Q Consensus       150 ~~v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~  196 (372)
                      +.+++..++++|++++++.+++.. .+.+++.+++.  +++|++|.|+
T Consensus       154 ~~v~~~~l~~lP~~~~~~~~~~~~~~~~~~~~a~~~--~k~G~~V~vi  199 (202)
T d1e3ia1         154 TVVSEANLARVDDEFDLDLLVTHALPFESINDAIDL--MKEGKSIRTI  199 (202)
T ss_dssp             EEEEGGGEEECCTTSCGGGGEEEEEEGGGHHHHHHH--HHTTCCSEEE
T ss_pred             EEEehhhEEECCCCCCHHHHHHHHHHHHHHHHHHHh--CCCCCEEEEE
Confidence            999999999999999998777665 55666777754  3679988775

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=4e-31  Score=221.46  Aligned_cols=174  Identities=22%  Similarity=0.354  Sum_probs=149.9

Q ss_pred             ccchhcceeEEEecC---CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEe
Q 017426           12 EDGEEVNMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV   88 (372)
Q Consensus        12 ~~~~~~~~~~~~~~~---~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   88 (372)
                      |..|.+||+..+.++   ..+++.+.+.++++|+||||||.++|+|++|++.+.|.+.   ...+|+++|||++|+|+++
T Consensus         1 m~~P~~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~---~~~~P~i~GHE~~G~Vv~v   77 (192)
T d1piwa1           1 MSYPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWG---NMKMPLVVGHEIVGKVVKL   77 (192)
T ss_dssp             CCTTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTS---CCCSSEECCCCEEEEEEEE
T ss_pred             CCCCceeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCC---CCCCCcCcccccccchhhc
Confidence            456778999999866   4577888877778999999999999999999999988543   2578999999999999999


Q ss_pred             cCCC-ccccccccccCCCCCEEEEcCCc-CCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCceEEC
Q 017426           89 GSEV-KTLVPGDRVTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKL  160 (372)
Q Consensus        89 G~~v-~~~~~gd~v~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~v~~~~~~~~  160 (372)
                      |+++ +.+++        ||||...+.. +|+.|.+|..+..++|++...+.      +...+|+|+||+.+++++++++
T Consensus        78 G~~v~~~~k~--------GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~i  149 (192)
T d1piwa1          78 GPKSNSGLKV--------GQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPI  149 (192)
T ss_dssp             CTTCCSSCCT--------TCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEEC
T ss_pred             ccccccccCC--------CCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEEC
Confidence            9988 56999        9999776644 69999999999999999877664      2356799999999999999999


Q ss_pred             CCCCCcccccccch-hHHHHHHHHhcCCCCCCEEEEE
Q 017426          161 PDNVSLEEGAMCEP-LSVGVHACRRANIGPETNVLIM  196 (372)
Q Consensus       161 P~~~~~~~aa~~~~-~~~a~~~l~~~~~~~g~~vlI~  196 (372)
                      |+++++++|+++.+ +.+||++++++++++|++|||.
T Consensus       150 P~~l~~e~Aal~~~~~~ta~~~l~~~~vk~g~~Vvv~  186 (192)
T d1piwa1         150 PENIWVETLPVGEAGVHEAFERMEKGDVRYRFTLVGY  186 (192)
T ss_dssp             CTTCCEEEEESSHHHHHHHHHHHHHTCCSSEEEEECC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence            99999998887765 5689999999999999999985

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.97  E-value=2.9e-31  Score=223.69  Aligned_cols=173  Identities=20%  Similarity=0.225  Sum_probs=149.6

Q ss_pred             cchhcceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCC
Q 017426           13 DGEEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (372)
Q Consensus        13 ~~~~~~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (372)
                      |..++|||+++.++ ++|+++++|.|.|+++||||||+++|||++|+++++|.+.   ...+|.++|||++|+|+++|++
T Consensus         2 ~~~~~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~---~~~~p~v~GhE~~G~V~~vG~~   78 (197)
T d2fzwa1           2 NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP---EGCFPVILGHLGAGIVESVGEG   78 (197)
T ss_dssp             CCCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCT---TCCSSBCCCCEEEEEEEEECTT
T ss_pred             CCceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcc---cccccccCCcceeeEEEeecCC
Confidence            45678999999876 5699999999999999999999999999999999998542   2578999999999999999999


Q ss_pred             CccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC--------------------CCCCcceeEEE
Q 017426           92 VKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP--------------------PVHGSLANQVV  151 (372)
Q Consensus        92 v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~g~~~e~~~  151 (372)
                      |+++++        ||||.+.+..+|+.|.+|..++.++|++...+...                    ...|+|+||+.
T Consensus        79 V~~~~~--------GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~v  150 (197)
T d2fzwa1          79 VTKLKA--------GDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTV  150 (197)
T ss_dssp             CCSCCT--------TCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEE
T ss_pred             ceecCC--------CCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEE
Confidence            999999        99999999999999999999999999875443220                    11489999999


Q ss_pred             ecCCceEECCCCCCcccccccc-hhHHHHHHHHh-cCCCCCCEEEEE
Q 017426          152 HPADLCFKLPDNVSLEEGAMCE-PLSVGVHACRR-ANIGPETNVLIM  196 (372)
Q Consensus       152 v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~g~~vlI~  196 (372)
                      +++..++++|+++++++|+++. .+.+++.++++ ...+.+++|||+
T Consensus       151 vp~~~~~~vp~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         151 VADISVAKIDPLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             EEGGGEEECCTTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             echHHEEECCCCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            9999999999999999999776 67788888855 334678899874

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.97  E-value=8.6e-31  Score=217.92  Aligned_cols=168  Identities=29%  Similarity=0.409  Sum_probs=144.7

Q ss_pred             ceeEEEecCC-ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCC-----cccCCCcccccceeEEEEEecCC
Q 017426           18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCAD-----FVVKEPMVIGHECAGVIEKVGSE   91 (372)
Q Consensus        18 ~~~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~-----~~~~~p~~~G~e~~G~V~~vG~~   91 (372)
                      |||+++++++ +|++++++.|.|+++||+|||.++|+|++|+++++|.+...     ...++|+++|||++|+|+++|++
T Consensus         1 MKA~~~~~~G~pl~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~   80 (177)
T d1jvba1           1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (177)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEEeCCCCCEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccC
Confidence            7999999774 59999999999999999999999999999999999865321     23478999999999999999999


Q ss_pred             CccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCc-eEECCCCCCccccc
Q 017426           92 VKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL-CFKLPDNVSLEEGA  170 (372)
Q Consensus        92 v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~-~~~~P~~~~~~~aa  170 (372)
                      +++|++        ||||.+.+...|+.|.+|..++.++|++...++. ..+|+|+||+.++... ++++|+..+.+.|+
T Consensus        81 v~~~~~--------GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~-~~~G~~aey~~vp~~~~~~~~~~~~~~~~a~  151 (177)
T d1jvba1          81 VVGYSK--------GDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVIVPHYKYMYKLRRVKPMITKT  151 (177)
T ss_dssp             CCSCCT--------TCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTT-TBCCSSBSEEEESCGGGEEECSSSCCCCEEE
T ss_pred             cccccc--------CceEeeeeccccccccccccccccccCCcceeee-ccccccccEEEEEhHHeEEECCCCChHHHHH
Confidence            999999        9999999999999999999999999999988876 5789999999998654 66666655544444


Q ss_pred             cc-chhHHHHHHHHhcCCCCCCEEEE
Q 017426          171 MC-EPLSVGVHACRRANIGPETNVLI  195 (372)
Q Consensus       171 ~~-~~~~~a~~~l~~~~~~~g~~vlI  195 (372)
                      .. .+++++++++..+++ .|++|||
T Consensus       152 ~~~~~~~~a~~~~~~~~~-~G~~VlI  176 (177)
T d1jvba1         152 MKLEEANEAIDNLENFKA-IGRQVLI  176 (177)
T ss_dssp             EEGGGHHHHHHHHHTTCC-CSEEEEE
T ss_pred             HHHHHHHHHHHHHHhhcc-cCCceEC
Confidence            33 478899999988876 5999998

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.97  E-value=1.5e-30  Score=215.43  Aligned_cols=167  Identities=32%  Similarity=0.459  Sum_probs=144.9

Q ss_pred             ceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      |||+++++. ++|+++++|.|.|+++||||||+++|+|++|++.+.+...  ....+|.++|||++|+|+++|+++++++
T Consensus         1 MkA~v~~~~g~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~--~~~~~p~v~GhE~~G~Vv~vG~~v~~~~   78 (171)
T d1rjwa1           1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWP--VKPKLPLIPGHEGVGIVEEVGPGVTHLK   78 (171)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSS--SCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEecCCCCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccc--cccccccccCCEEEEEEEEecccccCce
Confidence            799999975 4699999999999999999999999999999998876432  2357799999999999999999999999


Q ss_pred             ccccccCCCCCEEEEcC-CcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccchh
Q 017426           97 PGDRVTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL  175 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~~  175 (372)
                      +        ||||.+.+ ...|+.|..|..+..++|.+...++. ..+|+|+||+.+++++++++|++++++.|+ +.++
T Consensus        79 v--------GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~e~A~-l~~~  148 (171)
T d1rjwa1          79 V--------GDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGGYAEYCRAAADYVVKIPDNTIIEVQP-LEKI  148 (171)
T ss_dssp             T--------TCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGCEECCTTCCEEEEE-GGGH
T ss_pred             e--------eeEEeeccccccccccccccCCCccccccccccce-eccCccccceEecHHHEEECCCCCCHHHHH-HHHH
Confidence            9        99998765 45688999999999999999887775 578999999999999999999999987665 4677


Q ss_pred             HHHHHHHHhcCCCCCCEEEEEC
Q 017426          176 SVGVHACRRANIGPETNVLIMG  197 (372)
Q Consensus       176 ~~a~~~l~~~~~~~g~~vlI~G  197 (372)
                      .++++.+.++.+ +|++|||+|
T Consensus       149 ~~~~~~~~~~~~-~G~tVlViG  169 (171)
T d1rjwa1         149 NEVFDRMLKGQI-NGRVVLTLE  169 (171)
T ss_dssp             HHHHHHHHTTCC-SSEEEEECC
T ss_pred             HHHHHHHHhcCC-CCCEEEEeC
Confidence            788877766666 499999987

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.96  E-value=2.8e-33  Score=236.38  Aligned_cols=181  Identities=26%  Similarity=0.391  Sum_probs=148.6

Q ss_pred             ceeEEEecCCceeEEEecCCCC-------CCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecC
Q 017426           18 NMAAWLLGVNTLKIQPFELPSL-------GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (372)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~-------~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (372)
                      +||+++++++.++++++|.|.+       .++||+|||.+++||++|++.+.|...    ..+|.++|||++|+|+++|+
T Consensus         2 ~kA~v~~~~~~le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~----~~~P~v~GHE~~G~Vv~vG~   77 (201)
T d1kola1           2 NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT----AQVGLVLGHEITGEVIEKGR   77 (201)
T ss_dssp             EEEEEEEETTEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC----CCTTCBCCCCEEEEEEEECT
T ss_pred             cEEEEEeCCCceEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcc----cccceeccceeeeeeecccc
Confidence            6999999999999999999865       469999999999999999999987542    46899999999999999999


Q ss_pred             CCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccc---------cCCCCCcceeEEEecC--CceEE
Q 017426           91 EVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA---------TPPVHGSLANQVVHPA--DLCFK  159 (372)
Q Consensus        91 ~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~g~~~e~~~v~~--~~~~~  159 (372)
                      +|++|++        ||||.+.+..+|+.|++|..++++.|.+.....         ....+|+|+||+++|.  .++++
T Consensus        78 ~V~~~~v--------GdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~  149 (201)
T d1kola1          78 DVENLQI--------GDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLK  149 (201)
T ss_dssp             TCCSCCT--------TCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEE
T ss_pred             ccccccc--------cceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEE
Confidence            9999999        999999999999999999999998886643221         1245799999999985  36999


Q ss_pred             CCCCCCccccc-ccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Q 017426          160 LPDNVSLEEGA-MCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA  214 (372)
Q Consensus       160 ~P~~~~~~~aa-~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~  214 (372)
                      ||++....+++ +..+++++++++...+.+.++    +|+|++|++++|+||.+|+
T Consensus       150 iPd~~~~~~~~~~~~~~~~~~~a~~~~~~~~g~----~g~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         150 LPDRDKAMEKINIAEVVGVQVISLDDAPRGYGE----FDAGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             CSCHHHHHHTCCHHHHHTEEEECGGGHHHHHHH----HHHTCSCEEEECTTCSSCC
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHhCCCCCeE----EeeCHHHHHHHHHHHHcCC
Confidence            99985555544 444666666666544333332    4889999999999999886

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.96  E-value=6.6e-31  Score=221.71  Aligned_cols=169  Identities=24%  Similarity=0.348  Sum_probs=140.8

Q ss_pred             hhcceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCc
Q 017426           15 EEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (372)
Q Consensus        15 ~~~~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (372)
                      ..+|||+++.++ ++|+++++|.|.|+++||||||.++|+|++|+++++|..+    .++|.++|||++|+|+++|++++
T Consensus         6 ~~~~KAav~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~----~~~P~i~GHE~~G~Vv~~G~~v~   81 (198)
T d1p0fa1           6 DITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP----SKFPVILGHEAVGVVESIGAGVT   81 (198)
T ss_dssp             CEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC----CCSSBCCCCCEEEEEEEECTTCC
T ss_pred             ceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeeccc----cccccccceeeeeeeeecCcccc
Confidence            358999999977 5799999999999999999999999999999999987543    46899999999999999999999


Q ss_pred             cccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC--------------------CCCCcceeEEEec
Q 017426           94 TLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP--------------------PVHGSLANQVVHP  153 (372)
Q Consensus        94 ~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~g~~~e~~~v~  153 (372)
                      ++++        ||||.+.+..+|+.|.+|..+..++|++....+..                    ...|+|+||+.++
T Consensus        82 ~~~~--------GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~  153 (198)
T d1p0fa1          82 CVKP--------GDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVA  153 (198)
T ss_dssp             SCCT--------TCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEE
T ss_pred             cCcC--------CCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEec
Confidence            9999        99999999999999999999999999876664331                    1248999999999


Q ss_pred             CCceEECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHH
Q 017426          154 ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGL  203 (372)
Q Consensus       154 ~~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~  203 (372)
                      +..++++|++++...++....        ....+.++++|||.|+|++|+
T Consensus       154 ~~~~~kip~~~~~~~~~~~~~--------~~~~v~~~~~vlv~G~G~iGl  195 (198)
T d1p0fa1         154 DIAVAKIDPKINVNFLVSTKL--------TLDQINKAFELLSSGQGVRSI  195 (198)
T ss_dssp             TTSEEEECTTSCGGGGEEEEE--------CGGGHHHHHHHTTTSSCSEEE
T ss_pred             HHHEEECCCCCCHHHHHHhhc--------chhhcCCCCEEEEECCCcceE
Confidence            999999999998776654321        112223344577777777764

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.96  E-value=2.7e-29  Score=207.45  Aligned_cols=144  Identities=29%  Similarity=0.342  Sum_probs=128.0

Q ss_pred             ceeEEEecCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccc
Q 017426           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (372)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (372)
                      ||++++.+++.+++.++|.|.|+++||+||++++|||++|++.+.+..   ...++|.++|||++|+|+++|++|++|++
T Consensus         1 MKa~v~~~~~~l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~---~~~~~P~i~GhE~~G~V~~vG~~v~~~~v   77 (177)
T d1jqba1           1 MKGFAMLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGA---LGDRKNMILGHEAVGEVVEVGSEVKDFKP   77 (177)
T ss_dssp             CEEEEEEETTEEEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCT---TCCCSSEECCCCEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEEeCCCeEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCC---CCCCCCccCcceeeEEeeecccccceecC
Confidence            799999999999999999999999999999999999999998887633   22477999999999999999999999999


Q ss_pred             cccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccc--cCCCCCcceeEEEecC--CceEECCCCCCccccccc
Q 017426           98 GDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA--TPPVHGSLANQVVHPA--DLCFKLPDNVSLEEGAMC  172 (372)
Q Consensus        98 gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~e~~~v~~--~~~~~~P~~~~~~~aa~~  172 (372)
                              ||||.+.+..+|++|++|+.+..++|++.....  +...+|+|+||+++|.  .+++++|+++++++++..
T Consensus        78 --------GdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~  148 (177)
T d1jqba1          78 --------GDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTH  148 (177)
T ss_dssp             --------TCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEE
T ss_pred             --------CCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHH
Confidence                    999999999999999999999999998875432  2346799999999996  369999999998877643

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=5.1e-29  Score=206.31  Aligned_cols=158  Identities=23%  Similarity=0.353  Sum_probs=133.6

Q ss_pred             ceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      |||+...++ ++|++.++|.|.|+++||||||.++|||++|++.+.|....   ..+|.++|||++|+|+++|++|++++
T Consensus         1 m~a~~~~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~---~~~P~i~GhE~~G~V~~vG~~V~~~~   77 (179)
T d1uufa1           1 IKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAG---TVYPCVPGHEIVGRVVAVGDQVEKYA   77 (179)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSC---CCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeecc---ccccccccccccccchhhccccccCC
Confidence            688887754 68999999999999999999999999999999999985432   47799999999999999999999999


Q ss_pred             ccccccCCCCCEEEEcC-CcCCCCCccccCCCCCCCCCcccccc-------CCCCCcceeEEEecCCceEECCCCCCccc
Q 017426           97 PGDRVTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFAT-------PPVHGSLANQVVHPADLCFKLPDNVSLEE  168 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~e~~~v~~~~~~~~P~~~~~~~  168 (372)
                      +        ||||.+++ ..+|++|++|..+++++|+++...+.       ...+|+|+||+.+++++++++|+..  ..
T Consensus        78 v--------GdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~--~~  147 (179)
T d1uufa1          78 P--------GDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVAD--IE  147 (179)
T ss_dssp             T--------TCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCC--EE
T ss_pred             C--------CCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCC--cC
Confidence            9        99997775 45899999999999999998754322       1346999999999999999999654  33


Q ss_pred             ccccchhHHHHHHHHhcCCC
Q 017426          169 GAMCEPLSVGVHACRRANIG  188 (372)
Q Consensus       169 aa~~~~~~~a~~~l~~~~~~  188 (372)
                      ++.+.++.++++++.++.++
T Consensus       148 ~~~a~~l~~a~~a~~~a~v~  167 (179)
T d1uufa1         148 MIRADQINEAYERMLRGDVK  167 (179)
T ss_dssp             EECGGGHHHHHHHHHTTCSS
T ss_pred             hhHhchhHHHHHHHHHhCcc
Confidence            44456778899998877664

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.96  E-value=1.2e-28  Score=208.41  Aligned_cols=170  Identities=22%  Similarity=0.296  Sum_probs=140.4

Q ss_pred             cchhcceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCC
Q 017426           13 DGEEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (372)
Q Consensus        13 ~~~~~~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (372)
                      -..++|||+++..+ ++|++++++.|.|+|+||||||.++|||++|++.+.|.+.    ..+|.++|||++|+|+++|++
T Consensus         4 ~~~~k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~----~~~P~i~GHE~~G~Vv~vG~~   79 (198)
T d2jhfa1           4 GKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV----TPLPVIAGHEAAGIVESIGEG   79 (198)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC----CCSSBCCCCSEEEEEEEECTT
T ss_pred             CCceEEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCcc----cccceecccceeEEEEecCcc
Confidence            34567999998855 5699999999999999999999999999999999998543    467999999999999999999


Q ss_pred             CccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC--------------------CCCCcceeEEE
Q 017426           92 VKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP--------------------PVHGSLANQVV  151 (372)
Q Consensus        92 v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~g~~~e~~~  151 (372)
                      ++++++        ||||++.+..+|+.|++|..+..++|++.......                    ...|+|+||++
T Consensus        80 v~~~~v--------GdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~  151 (198)
T d2jhfa1          80 VTTVRP--------GDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTV  151 (198)
T ss_dssp             CCSCCT--------TCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEE
T ss_pred             ccCcCC--------CCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEE
Confidence            999999        99999999999999999999999999877653221                    12489999999


Q ss_pred             ecCCceEECCCCCCcccccccc-hhHHHHHHHHhcCCCCCCEEEEE
Q 017426          152 HPADLCFKLPDNVSLEEGAMCE-PLSVGVHACRRANIGPETNVLIM  196 (372)
Q Consensus       152 v~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~  196 (372)
                      +|+.+++++|+.++++.++... ++.....+.  ..+++|++|.|.
T Consensus       152 v~~~~~~~~p~~~~~e~l~~~~~~~~~v~~g~--~~l~~G~~VaVi  195 (198)
T d2jhfa1         152 VDEISVAKIDAAFALDPLITHVLPFEKINEGF--DLLRSGESIRTI  195 (198)
T ss_dssp             EEGGGEEECCTTSCCGGGEEEEEEGGGHHHHH--HHHHTTCCSEEE
T ss_pred             eCHHHeEECCCCCCHHHHHHHHHHHHhhhhCC--ceeeCCCEEEEE
Confidence            9999999999998876655432 333222222  235788988775

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.2e-27  Score=194.42  Aligned_cols=170  Identities=46%  Similarity=0.824  Sum_probs=154.0

Q ss_pred             CCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCC
Q 017426          164 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  243 (372)
Q Consensus       164 ~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~  243 (372)
                      +|+++||++.|+++||++++++++++|++|+|+|+|++|++++|+++.+|+++|++++++++|.++++++|++.+++++.
T Consensus         1 vS~e~Aal~epla~a~~a~~~~~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~   80 (171)
T d1pl8a2           1 VTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK   80 (171)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccccc
Confidence            47899999999999999999999999999999999999999999999999988999999999999999999999887544


Q ss_pred             CcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccCCCcH
Q 017426          244 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW  323 (372)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  323 (372)
                        +++.+..+.+..+.+.++|++|||+|++..++.++++++++|+++.+|......+++...+..|++++.|++.+.+++
T Consensus        81 --~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~~~~~~~~~~~~k~l~i~Gs~~~~~~~  158 (171)
T d1pl8a2          81 --ESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTW  158 (171)
T ss_dssp             --CCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSCSSCH
T ss_pred             --cccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHHCCcEEEEEeCCHhHH
Confidence              455555555555567899999999999989999999999999999999877777888889999999999998888899


Q ss_pred             HHHHHHHHcCCC
Q 017426          324 PLCLELLRSGKI  335 (372)
Q Consensus       324 ~~~~~ll~~g~~  335 (372)
                      +++++++++|++
T Consensus       159 ~~al~li~~gki  170 (171)
T d1pl8a2         159 PVAISMLASKSV  170 (171)
T ss_dssp             HHHHHHHHTTSC
T ss_pred             HHHHHHHHcCCC
Confidence            999999999987

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.95  E-value=5.2e-27  Score=193.81  Aligned_cols=170  Identities=48%  Similarity=0.793  Sum_probs=154.2

Q ss_pred             CCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCC
Q 017426          164 VSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  243 (372)
Q Consensus       164 ~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~  243 (372)
                      +|+++||++.|+++||++++++++++|++|||+|+|++|++++|+++.+|+ +|++++++++|.++++++|++..+.++.
T Consensus         1 VS~e~Aal~ePla~a~~a~~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga~~~~~~~~   79 (170)
T d1e3ja2           1 VSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDP   79 (170)
T ss_dssp             SCHHHHHTHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEECCT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCCcEEEeccc
Confidence            478999999999999999999999999999999999999999999999999 6999999999999999999999887776


Q ss_pred             CcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccCCCcH
Q 017426          244 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW  323 (372)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  323 (372)
                      ...+..+...++.+..+.++|++|||+|++..++.++++++++|+++.+|.......++...+..|++++.|+..+.+++
T Consensus        80 ~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~gs~~~~~~~  159 (170)
T d1e3ja2          80 AKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDY  159 (170)
T ss_dssp             TTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCSSCH
T ss_pred             cccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCCCCCcCHHHHHHCCCEEEEEECCHHHH
Confidence            66676666666666667899999999999888999999999999999999877767788888999999999998888899


Q ss_pred             HHHHHHHHcCC
Q 017426          324 PLCLELLRSGK  334 (372)
Q Consensus       324 ~~~~~ll~~g~  334 (372)
                      +++++++++|+
T Consensus       160 ~~ai~li~~Gk  170 (170)
T d1e3ja2         160 PIALEMVASGR  170 (170)
T ss_dssp             HHHHHHHHTTS
T ss_pred             HHHHHHHHcCC
Confidence            99999999885

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.8e-27  Score=189.10  Aligned_cols=142  Identities=21%  Similarity=0.310  Sum_probs=122.2

Q ss_pred             ceeEEEe---cCCceeEE-EecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCc
Q 017426           18 NMAAWLL---GVNTLKIQ-PFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (372)
Q Consensus        18 ~~~~~~~---~~~~l~~~-~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (372)
                      |||++++   +++.+++. ++|.|.|+++||+|||.++++|++|++.+.|.+..  ...+|.++|+|++|+|+++|++++
T Consensus         3 MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~--~~~~p~i~G~e~~G~V~~vG~~v~   80 (150)
T d1yb5a1           3 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR--KPLLPYTPGSDVAGVIEAVGDNAS   80 (150)
T ss_dssp             EEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC--CCCSSBCCCSCEEEEEEEECTTCT
T ss_pred             eeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCc--cccccccCccceeeeeEeecceee
Confidence            6888888   45678885 68999999999999999999999999999886533  246788999999999999999999


Q ss_pred             cccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc
Q 017426           94 TLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE  173 (372)
Q Consensus        94 ~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~  173 (372)
                      +|++        ||||++.+                           ..+|+|+||+.+++++++++|+++++++|+.++
T Consensus        81 ~~~v--------GdrV~~~~---------------------------~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~  125 (150)
T d1yb5a1          81 AFKK--------GDRVFTSS---------------------------TISGGYAEYALAADHTVYKLPEKLKPVIGSQYP  125 (150)
T ss_dssp             TCCT--------TCEEEESC---------------------------CSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEE
T ss_pred             cccc--------Cccccccc---------------------------cccccccccccccccccccccCCCCHHHHHHhh
Confidence            9999        88887622                           346999999999999999999999999999877


Q ss_pred             -hhHHHHHHH-HhcCCCCCCEEEEE
Q 017426          174 -PLSVGVHAC-RRANIGPETNVLIM  196 (372)
Q Consensus       174 -~~~~a~~~l-~~~~~~~g~~vlI~  196 (372)
                       ...++|+.+ ..+..++|+++||+
T Consensus       126 ~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1         126 LEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             GGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             hhhhhehhhheEEcCcccCCEEEEC
Confidence             566788876 56788999999984

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=1.2e-25  Score=180.52  Aligned_cols=133  Identities=25%  Similarity=0.289  Sum_probs=113.9

Q ss_pred             cCCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCccccccccccCC
Q 017426           25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVTLV  104 (372)
Q Consensus        25 ~~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~gd~v~~~  104 (372)
                      +++.|++.+.+.|.|+++||+|||+++++|++|+.++.|.+..   ..+|.++|+|++|+|+++|++|++|++       
T Consensus        11 ~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~v-------   80 (147)
T d1qora1          11 GPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPP---PSLPSGLGTEAAGIVSKVGSGVKHIKA-------   80 (147)
T ss_dssp             SGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC---SSSSBCCCSCEEEEEEEECTTCCSCCT-------
T ss_pred             CCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCC---Ccceeeeccccccceeeeeeecccccc-------
Confidence            4567999999999999999999999999999999999986532   467999999999999999999999999       


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccccc--ccc-hhHHHHHH
Q 017426          105 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCE-PLSVGVHA  181 (372)
Q Consensus       105 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa--~~~-~~~~a~~~  181 (372)
                       ||||+..                           ....|+|+||+.++.+.++++|++++++.|+  .++ ..++++++
T Consensus        81 -GdrV~~~---------------------------~~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~  132 (147)
T d1qora1          81 -GDRVVYA---------------------------QSALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHE  132 (147)
T ss_dssp             -TCEEEES---------------------------CCSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHH
T ss_pred             -cceeeee---------------------------ccccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHH
Confidence             8887631                           1246999999999999999999999887554  333 56678888


Q ss_pred             HHhcCCCCCCEEEE
Q 017426          182 CRRANIGPETNVLI  195 (372)
Q Consensus       182 l~~~~~~~g~~vlI  195 (372)
                      +...++++|++|||
T Consensus       133 l~~~~~~~G~~VLI  146 (147)
T d1qora1         133 ILESRATQGSSLLI  146 (147)
T ss_dssp             HHHTTCCCBCCEEE
T ss_pred             HHHhCCCCCCEEEe
Confidence            77788999999998

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.92  E-value=7.7e-25  Score=180.68  Aligned_cols=167  Identities=22%  Similarity=0.311  Sum_probs=139.6

Q ss_pred             CCcccccccc-hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecC
Q 017426          164 VSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  242 (372)
Q Consensus       164 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~  242 (372)
                      +|+++|+.++ +++|+|++++.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|.++++++|+++++++.
T Consensus         1 ip~e~A~~l~~~~~ta~~a~~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~~   80 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYK   80 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECGG
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCcccccccc
Confidence            4788999885 789999999999999999999999999999999999999998899999999999999999999998764


Q ss_pred             CCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchh----hhccCcEEEeecc
Q 017426          243 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDVVGVFR  318 (372)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i~~~~~  318 (372)
                        ++++.+.+++++  .+.++|++|||+|++..+++++++++++|+++.+|.......+++..    ...+.+++.+...
T Consensus        81 --~~~~~~~v~~~t--~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~  156 (174)
T d1jqba2          81 --NGHIEDQVMKLT--NGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLC  156 (174)
T ss_dssp             --GSCHHHHHHHHT--TTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBCC
T ss_pred             --chhHHHHHHHHh--hccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEecC
Confidence              367778787775  46789999999999888999999999999999999765543333322    2446778888754


Q ss_pred             C--CCcHHHHHHHHHcCC
Q 017426          319 Y--KNTWPLCLELLRSGK  334 (372)
Q Consensus       319 ~--~~~~~~~~~ll~~g~  334 (372)
                      .  +..++.++++++.|+
T Consensus       157 ~~~r~~~e~l~~li~~gk  174 (174)
T d1jqba2         157 PGGRLRAERLRDMVVYNR  174 (174)
T ss_dssp             CCHHHHHHHHHHHHHTTS
T ss_pred             CCCcccHHHHHHHHHcCC
Confidence            3  345677888888764

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.92  E-value=1.1e-24  Score=179.69  Aligned_cols=167  Identities=26%  Similarity=0.374  Sum_probs=148.3

Q ss_pred             CCcccccccch-hHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEec
Q 017426          164 VSLEEGAMCEP-LSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  241 (372)
Q Consensus       164 ~~~~~aa~~~~-~~~a~~~l~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~  241 (372)
                      +++.+||++++ ..|||++++++++++|++|||+|+ |++|++++|+++..|...|++++.+++|.++++++|++.++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~   80 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINA   80 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeecc
Confidence            47789998885 568999999999999999999996 9999999999999998889999999999999999999998875


Q ss_pred             CCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-C
Q 017426          242 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-K  320 (372)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~  320 (372)
                      +  .+++.+.+++.+  .+.++|++|||+|++..++.++++++++|+++.+|....+..++...+..+++++.|+..+ +
T Consensus        81 ~--~~~~~~~~~~~~--~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~Gs~~~~~  156 (170)
T d1jvba2          81 S--MQDPLAEIRRIT--ESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQ  156 (170)
T ss_dssp             T--TSCHHHHHHHHT--TTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCCCCCHHHHHHHTCEEEECCSCCH
T ss_pred             C--CcCHHHHHHHHh--hcccchhhhcccccchHHHhhhhhcccCCEEEEeccccCccccCHHHHHhCCcEEEEEecCCH
Confidence            4  367777776654  4678999999999988899999999999999999988777888888999999999999876 5


Q ss_pred             CcHHHHHHHHHcCC
Q 017426          321 NTWPLCLELLRSGK  334 (372)
Q Consensus       321 ~~~~~~~~ll~~g~  334 (372)
                      ++++++++|+++|+
T Consensus       157 ~d~~~~l~lv~~GK  170 (170)
T d1jvba2         157 SDFLGIMRLAEAGK  170 (170)
T ss_dssp             HHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHcCC
Confidence            77999999999885

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.92  E-value=9.9e-25  Score=176.00  Aligned_cols=146  Identities=18%  Similarity=0.093  Sum_probs=115.9

Q ss_pred             hcceeEEEecCC---ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCC
Q 017426           16 EVNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (372)
Q Consensus        16 ~~~~~~~~~~~~---~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (372)
                      .+|||+++...+   .+++++++.|.|+++||||||+++|+|++|+..+.|.+.  .....|.++|+|++|+|++  .++
T Consensus         2 ~~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~--~~~~~p~v~g~e~~G~v~~--~~~   77 (152)
T d1xa0a1           2 SAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGK--IVKTYPFVPGIDLAGVVVS--SQH   77 (152)
T ss_dssp             CEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGS--SCCSSSBCCCSEEEEEEEE--CCS
T ss_pred             CceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhccc--ccccccceeeeeeeeeeec--cCC
Confidence            468999888543   577889999999999999999999999999998887542  2246799999999999998  556


Q ss_pred             ccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccccccc
Q 017426           93 KTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC  172 (372)
Q Consensus        93 ~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~  172 (372)
                      +.|++        ||+|....+.-                      ....+|+|+||+.+|+++++++|+++++ +|+++
T Consensus        78 ~~~~~--------g~~v~~~~~~~----------------------~~~~~G~~aEy~~v~~~~~~~iP~~l~~-~aa~l  126 (152)
T d1xa0a1          78 PRFRE--------GDEVIATGYEI----------------------GVTHFGGYSEYARLHGEWLVPLPKGLER-IAQEI  126 (152)
T ss_dssp             SSCCT--------TCEEEEESTTB----------------------TTTBCCSSBSEEEECGGGCEECCTTHHH-HEEEE
T ss_pred             Ccccc--------CCEEEEecCcc----------------------ccccCCCcceeeeehhhccccCCCCCCH-HHHHH
Confidence            78999        77776532110                      1235799999999999999999999985 56656


Q ss_pred             c-hhHHHHHHH-HhcCCCCCCEEEEEC
Q 017426          173 E-PLSVGVHAC-RRANIGPETNVLIMG  197 (372)
Q Consensus       173 ~-~~~~a~~~l-~~~~~~~g~~vlI~G  197 (372)
                      + ...|||.++ ..++++ |++|||+|
T Consensus       127 ~~a~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1         127 SLAELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             EGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             HHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence            5 456777666 567775 99999975

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.91  E-value=6.3e-24  Score=175.49  Aligned_cols=165  Identities=25%  Similarity=0.442  Sum_probs=142.7

Q ss_pred             Ccccccccch-hHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecC
Q 017426          165 SLEEGAMCEP-LSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  242 (372)
Q Consensus       165 ~~~~aa~~~~-~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~  242 (372)
                      +++.|+++++ ..|||+++ +.++++||++|||+|+|++|++++|+|+.+|++++++++++++|.++++++|++++++++
T Consensus         2 P~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~~   81 (174)
T d1f8fa2           2 PIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSK   81 (174)
T ss_dssp             CGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETT
T ss_pred             CHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeCC
Confidence            5677888885 66899986 568999999999999999999999999999999889999999999999999999998865


Q ss_pred             CCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCC--CCccccchhhhccCcEEEeeccC-
Q 017426          243 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH--HEMTVPLTPAAVREVDVVGVFRY-  319 (372)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~-  319 (372)
                      +  +++.+.+++++   ++++|++|||+|++..++.+++.++++|+++.+|...  ...+++...+..+++++.|+... 
T Consensus        82 ~--~~~~~~i~~~t---~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g~  156 (174)
T d1f8fa2          82 T--QDPVAAIKEIT---DGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGS  156 (174)
T ss_dssp             T--SCHHHHHHHHT---TSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGG
T ss_pred             C--cCHHHHHHHHc---CCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCcccccCHHHHHHCCCEEEEEEecC
Confidence            3  67888888774   4689999999999889999999999999999998643  33467778889999999998643 


Q ss_pred             ---CCcHHHHHHHHHcCC
Q 017426          320 ---KNTWPLCLELLRSGK  334 (372)
Q Consensus       320 ---~~~~~~~~~ll~~g~  334 (372)
                         .++++++++|+++|+
T Consensus       157 ~~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         157 GSPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             SCHHHHHHHHHHHHHTTS
T ss_pred             CChHHHHHHHHHHHHcCC
Confidence               457889999999885

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=4.5e-24  Score=176.56  Aligned_cols=163  Identities=22%  Similarity=0.353  Sum_probs=137.4

Q ss_pred             CCcccccccc-hhHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEe
Q 017426          164 VSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  240 (372)
Q Consensus       164 ~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~  240 (372)
                      +|+++||+++ ++.|||+++. .+++++|++|||+|+ |++|++++|+|+.+|+ .++++++++++.++++++|++.+++
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCc-ccccccccccccccccccCcccccc
Confidence            5789999887 7789999985 588999999999997 9999999999999999 5788878899999999999999988


Q ss_pred             cCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-
Q 017426          241 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-  319 (372)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-  319 (372)
                      ++  ++++.+.+++.+  .+.++|++||++|+ ..++.++++|+++|+++.+|... ..+++...+..+++++.++..+ 
T Consensus        80 ~~--~~~~~~~i~~~t--~~~g~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~k~~~i~g~~~~~  153 (174)
T d1yb5a2          80 HR--EVNYIDKIKKYV--GEKGIDIIIEMLAN-VNLSKDLSLLSHGGRVIVVGSRG-TIEINPRDTMAKESSIIGVTLFS  153 (174)
T ss_dssp             TT--STTHHHHHHHHH--CTTCEEEEEESCHH-HHHHHHHHHEEEEEEEEECCCCS-CEEECTHHHHTTTCEEEECCGGG
T ss_pred             cc--cccHHHHhhhhh--ccCCceEEeecccH-HHHHHHHhccCCCCEEEEEecCC-CCCCCHHHHHHCCCEEEEEEecC
Confidence            64  367888887765  47789999999996 58999999999999999998643 3566777888999999998654 


Q ss_pred             --CCcHHHHHHHHHcC
Q 017426          320 --KNTWPLCLELLRSG  333 (372)
Q Consensus       320 --~~~~~~~~~ll~~g  333 (372)
                        .+++++++++++++
T Consensus       154 ~~~~~~~~~~~~l~~g  169 (174)
T d1yb5a2         154 STKEEFQQYAAALQAG  169 (174)
T ss_dssp             CCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHH
Confidence              34567777776553

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.91  E-value=9.1e-24  Score=173.37  Aligned_cols=163  Identities=24%  Similarity=0.362  Sum_probs=141.1

Q ss_pred             CCcccccccc-hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecC
Q 017426          164 VSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  242 (372)
Q Consensus       164 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~  242 (372)
                      +++++||.++ ...|||++++++++++|++|+|+|+|++|++++|+++.+|+ +|++++++++|.++++++|+++++++.
T Consensus         1 v~f~~aA~l~ca~~Ta~~al~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~Ga~~~i~~~   79 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGLKQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNAR   79 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEETT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeeccccHHHHHHHHHHcCC-ccceecchhhHHHhhhccCcccccccc
Confidence            4788999888 55689999999999999999999999999999999999997 799999999999999999999998764


Q ss_pred             CCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-CC
Q 017426          243 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KN  321 (372)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~  321 (372)
                      .  +++.+.+++..    .+.+.++++.++++.++.++++++++|+++.+|......+++...+..|++++.|+..+ .+
T Consensus        80 ~--~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~~~~~  153 (166)
T d1llua2          80 Q--EDPVEAIQRDI----GGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRA  153 (166)
T ss_dssp             T--SCHHHHHHHHH----SSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHH
T ss_pred             c--hhHHHHHHHhh----cCCcccccccccchHHHHHHHHhcCCcEEEEEEecCCCccCCHHHHHhCCcEEEEEeecCHH
Confidence            3  56666665542    45666777777778999999999999999999987777788888899999999998876 56


Q ss_pred             cHHHHHHHHHcC
Q 017426          322 TWPLCLELLRSG  333 (372)
Q Consensus       322 ~~~~~~~ll~~g  333 (372)
                      +++++++++++|
T Consensus       154 d~~e~l~l~~~G  165 (166)
T d1llua2         154 DLQEALDFAGEG  165 (166)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHHHCc
Confidence            799999999887

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.91  E-value=3.6e-23  Score=170.65  Aligned_cols=166  Identities=22%  Similarity=0.335  Sum_probs=137.0

Q ss_pred             cccccccch-hHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCC
Q 017426          166 LEEGAMCEP-LSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  243 (372)
Q Consensus       166 ~~~aa~~~~-~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~  243 (372)
                      |.+||++.+ +.|+|+++ +.+++++|++|||+|+|++|++++|+++.+|+++|++++++++|.++++++|+++++++..
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~   81 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKD   81 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCC
Confidence            567888884 67899997 5689999999999999999999999999999989999999999999999999999998765


Q ss_pred             CcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhcc-CCEEEEEcCCCCCccccchh-hhccCcEEEeeccC--
Q 017426          244 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCA-GGKVCLVGMGHHEMTVPLTP-AAVREVDVVGVFRY--  319 (372)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~--  319 (372)
                      .+....+..+..   .++++|++||++|+...++.++..+++ +|+++.+|.......++... ...+++++.|+...  
T Consensus        82 ~d~~~~~~~~~~---~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  158 (174)
T d1p0fa2          82 YDKPIYEVICEK---TNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGF  158 (174)
T ss_dssp             CSSCHHHHHHHH---TTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGGC
T ss_pred             chhHHHHHHHHh---cCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeCCC
Confidence            433344333332   467999999999999888999988876 59999999876666666654 34577899998732  


Q ss_pred             -CCcHHHHHHHHHcCC
Q 017426          320 -KNTWPLCLELLRSGK  334 (372)
Q Consensus       320 -~~~~~~~~~ll~~g~  334 (372)
                       .++++++++|+++|+
T Consensus       159 ~~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         159 KGEEVSRLVDDYMKKK  174 (174)
T ss_dssp             CGGGHHHHHHHHHTTS
T ss_pred             CHHHHHHHHHHHHcCC
Confidence             568999999999875

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.91  E-value=3.3e-24  Score=167.60  Aligned_cols=129  Identities=21%  Similarity=0.207  Sum_probs=109.4

Q ss_pred             ceeEEEecC-CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcccc
Q 017426           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (372)
Q Consensus        18 ~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (372)
                      |||+++.+. +++++.+++.|.|+++||+|||+++|+|++|+..+.|.+..  ...+|+++|+|++|+|           
T Consensus         1 MkA~~~~~~G~~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~--~~~~P~v~G~E~~G~V-----------   67 (131)
T d1iz0a1           1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLT--RLHPPFIPGMEVVGVV-----------   67 (131)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCCEEEEEE-----------
T ss_pred             CcEEEEccCCCCCEEEEccCCCCCCCEEEEEEEEEeccccccccccccccc--cccceeEeeeeeEEee-----------
Confidence            788888876 46999999999999999999999999999999999986533  2468999999999999           


Q ss_pred             ccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccc-hh
Q 017426           97 PGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PL  175 (372)
Q Consensus        97 ~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~-~~  175 (372)
                      +        ||+|...                            ..+|+|+||+.+++++++++|+++++++|++++ .+
T Consensus        68 v--------Gd~V~~~----------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~  111 (131)
T d1iz0a1          68 E--------GRRYAAL----------------------------VPQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEA  111 (131)
T ss_dssp             T--------TEEEEEE----------------------------CSSCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGH
T ss_pred             c--------cceEEEE----------------------------eccCccceeeeeCHHHeEEccCCCCHHHHHHHHHHH
Confidence            3        7777652                            246999999999999999999999999999886 67


Q ss_pred             HHHHHHHHhcCCCCCCEEEEE
Q 017426          176 SVGVHACRRANIGPETNVLIM  196 (372)
Q Consensus       176 ~~a~~~l~~~~~~~g~~vlI~  196 (372)
                      .|||+++... .+.|++||++
T Consensus       112 ~Ta~~al~~~-g~~g~tvl~l  131 (131)
T d1iz0a1         112 EAAFRALLDR-GHTGKVVVRL  131 (131)
T ss_dssp             HHHHHHTTCT-TCCBEEEEEC
T ss_pred             HHHHHHHHhc-ccCCCEEEEC
Confidence            7999998542 2569999873

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.90  E-value=2.9e-23  Score=170.92  Aligned_cols=166  Identities=26%  Similarity=0.433  Sum_probs=135.2

Q ss_pred             Ccccccccch-hHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecC
Q 017426          165 SLEEGAMCEP-LSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  242 (372)
Q Consensus       165 ~~~~aa~~~~-~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~  242 (372)
                      ++++||++.+ +.|+|+++ +.+++++|++|||+|+|++|++++|+++.+|+++|++++.+++|.++++++|++.++++.
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~   81 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR   81 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCc
Confidence            4678888885 67899997 569999999999999999999999999999999999999999999999999999998765


Q ss_pred             CCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccC-CEEEEEcCCCCCccccchhhhccCcEEEeeccC--
Q 017426          243 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--  319 (372)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--  319 (372)
                      ..+..... +.+.+  .++++|++|||+|.+..+++++++++++ |+++.+|.......++...+.. +.++.|+...  
T Consensus        82 ~~~~~~~~-~~~~~--~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~~~i~~~~~~~-~k~i~Gs~~Gs~  157 (174)
T d1e3ia2          82 ELDKPVQD-VITEL--TAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVIL-GRSINGTFFGGW  157 (174)
T ss_dssp             GCSSCHHH-HHHHH--HTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHT-TCEEEECSGGGC
T ss_pred             cchhhhhh-hHhhh--hcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCccccchHHHhc-cCEEEEEEeeCC
Confidence            43333333 33322  3789999999999999999999999996 9999999876665666555543 5678887643  


Q ss_pred             --CCcHHHHHHHHHcCC
Q 017426          320 --KNTWPLCLELLRSGK  334 (372)
Q Consensus       320 --~~~~~~~~~ll~~g~  334 (372)
                        .++++++++++++|+
T Consensus       158 ~~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         158 KSVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             ChHHHHHHHHHHHHCcC
Confidence              457788888888875

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.90  E-value=3e-23  Score=172.82  Aligned_cols=165  Identities=22%  Similarity=0.352  Sum_probs=133.4

Q ss_pred             ccccccc-hhHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCC
Q 017426          167 EEGAMCE-PLSVGVHACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN  244 (372)
Q Consensus       167 ~~aa~~~-~~~~a~~~l~~-~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~  244 (372)
                      ..+|.+. ..+|||+++.+ .++++|++|||+|+|++|++++|+|+++|++.|++++++++|.++++++|++.++++.+ 
T Consensus         4 ~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~-   82 (182)
T d1vj0a2           4 DVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRE-   82 (182)
T ss_dssp             HHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTT-
T ss_pred             HHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEeccc-
Confidence            3455555 46799999965 78999999999999999999999999999988999999999999999999999988654 


Q ss_pred             cccHHHHHHHHHH-HcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccc---hhhhccCcEEEeeccC-
Q 017426          245 LQDIAEEVEKIQK-AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPL---TPAAVREVDVVGVFRY-  319 (372)
Q Consensus       245 ~~~~~~~~~~~~~-~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~i~~~~~~-  319 (372)
                       .++.+..+++.+ +.+.++|+||||+|++..++.++++++++|+++.+|...+..+++.   ..+..|++++.|++.+ 
T Consensus        83 -~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~~  161 (182)
T d1vj0a2          83 -TSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD  161 (182)
T ss_dssp             -SCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCC
T ss_pred             -cchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeCC
Confidence             344443333332 2466899999999998889999999999999999987554433333   3366899999999876 


Q ss_pred             CCcHHHHHHHHHcC
Q 017426          320 KNTWPLCLELLRSG  333 (372)
Q Consensus       320 ~~~~~~~~~ll~~g  333 (372)
                      .+++++++++++++
T Consensus       162 ~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         162 TSHFVKTVSITSRN  175 (182)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHC
Confidence            56788999988765

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.90  E-value=4.4e-23  Score=169.58  Aligned_cols=165  Identities=27%  Similarity=0.390  Sum_probs=143.2

Q ss_pred             CCcccccccc-hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecC
Q 017426          164 VSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  242 (372)
Q Consensus       164 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~  242 (372)
                      +|+++||+++ ...|||++++.++++||++|||+|+|++|++++|+++..|+ .|++++++++|.++++++|++.++++.
T Consensus         1 ls~eeAA~l~~~~~Ta~~al~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~Ga~~~~~~~   79 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPL   79 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeecccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhcCcceecccc
Confidence            5789999887 55689999999999999999999999999999999999999 689999999999999999999988754


Q ss_pred             CCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-CC
Q 017426          243 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KN  321 (372)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~  321 (372)
                      +  +++.+.+++.+    .+.+.++++.+++..++.++++++++|+++.+|....+..++...+..+++++.++..+ .+
T Consensus        80 ~--~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~  153 (168)
T d1rjwa2          80 K--EDAAKFMKEKV----GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRK  153 (168)
T ss_dssp             T--SCHHHHHHHHH----SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHH
T ss_pred             c--chhhhhccccc----CCCceEEeecCCHHHHHHHHHHhccCCceEecccccCCCCCCHHHHHHCCcEEEEEeeCCHH
Confidence            3  67777777664    34455555666678999999999999999999988777788888899999999998865 67


Q ss_pred             cHHHHHHHHHcCCC
Q 017426          322 TWPLCLELLRSGKI  335 (372)
Q Consensus       322 ~~~~~~~ll~~g~~  335 (372)
                      +++++++++++|++
T Consensus       154 ~~~~~l~l~~~Gki  167 (168)
T d1rjwa2         154 DLQEALQFAAEGKV  167 (168)
T ss_dssp             HHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHhCCC
Confidence            89999999999987

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.90  E-value=3.6e-23  Score=170.67  Aligned_cols=163  Identities=24%  Similarity=0.354  Sum_probs=138.4

Q ss_pred             cccccccc-hhHHHHHHHHh-c-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecC
Q 017426          166 LEEGAMCE-PLSVGVHACRR-A-NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  242 (372)
Q Consensus       166 ~~~aa~~~-~~~~a~~~l~~-~-~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~  242 (372)
                      +.++|+++ ++.|||+++++ . .++||++|||+|+|++|++++|+++.+|+.++++++++++|.++++++|++++++++
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~   85 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR   85 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCc
Confidence            45677776 67899999976 3 589999999999999999999999999998999999999999999999999998764


Q ss_pred             CCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-CC
Q 017426          243 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KN  321 (372)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~  321 (372)
                      +   +..+...+.  +.+.++|++||++|+...++.+++.++++|+++.+|... ..+++...+..|++++.|+..+ .+
T Consensus        86 ~---~~~~~~~~~--~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~-~~~~~~~~l~~k~~~i~Gs~~~~~~  159 (172)
T d1h2ba2          86 R---DPVKQVMEL--TRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG-ELRFPTIRVISSEVSFEGSLVGNYV  159 (172)
T ss_dssp             S---CHHHHHHHH--TTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSS-CCCCCHHHHHHTTCEEEECCSCCHH
T ss_pred             c---cHHHHHHHh--hCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcc-cccCCHHHHHhCCcEEEEEEecCHH
Confidence            3   333334333  246789999999999888999999999999999998643 4577788899999999999876 56


Q ss_pred             cHHHHHHHHHcCC
Q 017426          322 TWPLCLELLRSGK  334 (372)
Q Consensus       322 ~~~~~~~ll~~g~  334 (372)
                      +++++++++++|+
T Consensus       160 d~~~~l~l~~~GK  172 (172)
T d1h2ba2         160 ELHELVTLALQGK  172 (172)
T ss_dssp             HHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHcCC
Confidence            7999999999885

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.89  E-value=7.4e-23  Score=170.66  Aligned_cols=166  Identities=20%  Similarity=0.267  Sum_probs=133.4

Q ss_pred             ccccccc-hhHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCC
Q 017426          167 EEGAMCE-PLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  243 (372)
Q Consensus       167 ~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~  243 (372)
                      +|||+++ ++.|||+++. .+++++|++|||+|+ |++|++++|+|+.+|+ .++++.+++++.++++++|++++++++ 
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~Ga~~vi~~~-   78 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSR-   78 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETT-
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccccccccccCC-
Confidence            4677777 7789999985 578999999999986 9999999999999999 577777889999999999999998754 


Q ss_pred             CcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCCCcc-ccchhhhccCcEEEeeccC---
Q 017426          244 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT-VPLTPAAVREVDVVGVFRY---  319 (372)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~---  319 (372)
                       ++++.+.+++++  .+.++|++||++|+ +.++.++++|+++|+++.+|....... ........++.++.++...   
T Consensus        79 -~~~~~~~v~~~t--~~~g~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (183)
T d1pqwa_          79 -SVDFADEILELT--DGYGVDVVLNSLAG-EAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNL  154 (183)
T ss_dssp             -CSTHHHHHHHHT--TTCCEEEEEECCCT-HHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHH
T ss_pred             -ccCHHHHHHHHh--CCCCEEEEEecccc-hHHHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEEEEEcccee
Confidence             478888888765  46789999999998 588999999999999999985443222 2222234577777776432   


Q ss_pred             -------CCcHHHHHHHHHcCCCCCC
Q 017426          320 -------KNTWPLCLELLRSGKIDVK  338 (372)
Q Consensus       320 -------~~~~~~~~~ll~~g~~~~~  338 (372)
                             .+.++++++++++|++++.
T Consensus       155 ~~~~~~~~~~~~~v~~~i~~G~i~p~  180 (183)
T d1pqwa_         155 KLQPARYRQLLQHILQHVADGKLEVL  180 (183)
T ss_dssp             HHCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             ccCHHHHHHHHHHHHHHHHCCCCcee
Confidence                   4568889999999999543

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.89  E-value=1.8e-22  Score=167.20  Aligned_cols=167  Identities=26%  Similarity=0.310  Sum_probs=134.0

Q ss_pred             Ccccccccch-hHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecC
Q 017426          165 SLEEGAMCEP-LSVGVHACR-RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  242 (372)
Q Consensus       165 ~~~~aa~~~~-~~~a~~~l~-~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~  242 (372)
                      ++++||++++ +.|+|+++. .++++||++|||+|+|++|++++|+++.+|+++|++++++++|.++++++|+++++++.
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~   81 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence            5678888885 679999985 68999999999999999999999999999998999999999999999999999999876


Q ss_pred             CCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCC-C-CccccchhhhccCcEEEeeccC-
Q 017426          243 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-H-EMTVPLTPAAVREVDVVGVFRY-  319 (372)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~-~~~~~~~~~~~~~~~i~~~~~~-  319 (372)
                      ....+..+.++..   .++++|++||++|.+..++.+...++++|+.+.++... . ....+......+.+++.|+... 
T Consensus        82 ~~~~~~~~~~~~~---~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~  158 (176)
T d2fzwa2          82 DFSKPIQEVLIEM---TDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGG  158 (176)
T ss_dssp             GCSSCHHHHHHHH---TTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             chhhHHHHHHHHH---cCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccccccHHHHHCCCEEEEEeeeC
Confidence            5545555544443   46799999999999888899999999998887765332 2 2233334445678899988653 


Q ss_pred             ---CCcHHHHHHHHHcCC
Q 017426          320 ---KNTWPLCLELLRSGK  334 (372)
Q Consensus       320 ---~~~~~~~~~ll~~g~  334 (372)
                         .+++.++++++++|+
T Consensus       159 ~~~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         159 WKSVESVPKLVSEYMSKK  176 (176)
T ss_dssp             CCHHHHHHHHHHHHHTTS
T ss_pred             CcHHHHHHHHHHHHHcCC
Confidence               356778888888875

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=2.5e-23  Score=170.87  Aligned_cols=161  Identities=20%  Similarity=0.222  Sum_probs=136.5

Q ss_pred             cccccccch-hHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCC
Q 017426          166 LEEGAMCEP-LSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN  244 (372)
Q Consensus       166 ~~~aa~~~~-~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~  244 (372)
                      .+.||.+.+ ..|+|++++++++++|++|||+|+|++|++++|+++.+|+ +|++++++++|.++++++|+++++++.+.
T Consensus         3 ~e~AApl~cag~Ta~~al~~~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~lGa~~~i~~~~~   81 (168)
T d1piwa2           3 SHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATLEE   81 (168)
T ss_dssp             HHHHGGGGTHHHHHHHHHHHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEECCCCcchhHHHHhhhccc-cccccccchhHHHHhhccCCcEEeeccch
Confidence            355776664 5689999999999999999999999999999999999999 58889999999999999999999876432


Q ss_pred             cccHHHHHHHHHHHcCCcceEEEeCCCcHH--HHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEEEeeccC-CC
Q 017426          245 LQDIAEEVEKIQKAMGTGIDVSFDCAGLNK--TMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KN  321 (372)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~  321 (372)
                       .++.+   +    ..+++|.++||+++..  .+..++++++++|+++.+|.......++...+..|++++.|+..+ .+
T Consensus        82 -~~~~~---~----~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~g~~~  153 (168)
T d1piwa2          82 -GDWGE---K----YFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIK  153 (168)
T ss_dssp             -SCHHH---H----SCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSCCEEECGGGCBSCEEEECCCCCHH
T ss_pred             -HHHHH---h----hhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccccccccHHHHHhCCcEEEEEeeCCHH
Confidence             23322   1    2568999999988643  367889999999999999987777788888999999999998765 67


Q ss_pred             cHHHHHHHHHcCCC
Q 017426          322 TWPLCLELLRSGKI  335 (372)
Q Consensus       322 ~~~~~~~ll~~g~~  335 (372)
                      +++++++|+++|++
T Consensus       154 ~~~e~l~li~~gkI  167 (168)
T d1piwa2         154 ELNQLLKLVSEKDI  167 (168)
T ss_dssp             HHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhCCC
Confidence            89999999999987

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.89  E-value=6.8e-23  Score=168.27  Aligned_cols=164  Identities=18%  Similarity=0.220  Sum_probs=129.8

Q ss_pred             CCcccccccc-hhHHHHHHHH----hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCe
Q 017426          164 VSLEEGAMCE-PLSVGVHACR----RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN  237 (372)
Q Consensus       164 ~~~~~aa~~~-~~~~a~~~l~----~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~  237 (372)
                      +|+++||.++ +..|||++++    .++.++|++|||+|+ |++|.+++|+|+.+|++ |+++.+++++.++++++|++.
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~-Viat~~s~~k~~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYT-VEASTGKAAEHDYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCC-EEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCc-eEEecCchHHHHHHHhcccce
Confidence            5789999998 6679997753    377889999999987 99999999999999995 788889999999999999999


Q ss_pred             EEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCC-CCCccccchhhhccCcEEEee
Q 017426          238 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG-HHEMTVPLTPAAVREVDVVGV  316 (372)
Q Consensus       238 v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~~~~~~~~~i~~~  316 (372)
                      +++++.   ++.+.++   .+.++++|+|||++|+. .+..++++|+++|+++.+|.. .....++...+..|++++.|.
T Consensus        80 vi~~~~---~~~~~~~---~~~~~gvD~vid~vgg~-~~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~~~k~~~i~Gv  152 (176)
T d1xa0a2          80 VLARED---VMAERIR---PLDKQRWAAAVDPVGGR-TLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGI  152 (176)
T ss_dssp             EEECC---------------CCSCCEEEEEECSTTT-THHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEEC
T ss_pred             eeecch---hHHHHHH---HhhccCcCEEEEcCCch-hHHHHHHHhCCCceEEEeecccCcccCCCHHHHHHCCcEEEEE
Confidence            998643   2333332   23467999999999985 999999999999999999965 455688999999999999997


Q ss_pred             ccC---CCcHHHHHHHHHcCCCC
Q 017426          317 FRY---KNTWPLCLELLRSGKID  336 (372)
Q Consensus       317 ~~~---~~~~~~~~~ll~~g~~~  336 (372)
                      ...   .+...++++.+. +.++
T Consensus       153 ~~~~~~~~~~~~~~~~la-g~lk  174 (176)
T d1xa0a2         153 DSVYCPMDLRLRIWERLA-GDLK  174 (176)
T ss_dssp             CSSSCCHHHHHHHHHHHH-TTTC
T ss_pred             eCCcCCHHHHHHHHHHHh-cccC
Confidence            544   234445555553 6663

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=1.6e-22  Score=161.12  Aligned_cols=131  Identities=18%  Similarity=0.128  Sum_probs=105.9

Q ss_pred             ceeEEEecC---CceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCCcc
Q 017426           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (372)
Q Consensus        18 ~~~~~~~~~---~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (372)
                      |||+++.+.   ..+++.+++.|+|+++||+|||+|+|||+.|+..+.|.+..  ...+|.++|+|++|+|+++|.+  .
T Consensus         1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~--~~~~p~v~G~e~~G~V~~~~~~--~   76 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKI--IRNFPMIPGIDFAGTVRTSEDP--R   76 (146)
T ss_dssp             CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSC--CCSSSBCCCSEEEEEEEEECST--T
T ss_pred             CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeeccc--ccccceeccccccccceeeccC--C
Confidence            789988854   45889999999999999999999999999999999886432  2467899999999999998764  6


Q ss_pred             ccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcccccccch
Q 017426           95 LVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEP  174 (372)
Q Consensus        95 ~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~~~  174 (372)
                      |++        ||+|.+....                      -+...+|+|+||+.+|+++++++|+++|+++||++++
T Consensus        77 ~~~--------g~~v~~~~~~----------------------~g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~  126 (146)
T d1o89a1          77 FHA--------GQEVLLTGWG----------------------VGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEA  126 (146)
T ss_dssp             CCT--------TCEEEEECTT----------------------BTTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGH
T ss_pred             ccc--------eeeEEeeccc----------------------ceecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHH
Confidence            888        8877653210                      0123579999999999999999999999999999885


Q ss_pred             h-HHHHHHH
Q 017426          175 L-SVGVHAC  182 (372)
Q Consensus       175 ~-~~a~~~l  182 (372)
                      . .||+.++
T Consensus       127 a~~tA~~~~  135 (146)
T d1o89a1         127 PNFAEAIIN  135 (146)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHH
Confidence            4 3554333

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.88  E-value=2.7e-22  Score=166.86  Aligned_cols=155  Identities=21%  Similarity=0.229  Sum_probs=126.4

Q ss_pred             chhHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHH
Q 017426          173 EPLSVGVHACR-RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE  250 (372)
Q Consensus       173 ~~~~~a~~~l~-~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~  250 (372)
                      .+..|||+++. .+++++|++|||+|+ |.+|++++|+|+..|+ +|+++.+++++.++++++|+++++++++  +++.+
T Consensus        12 ~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga~~vi~~~~--~~~~~   88 (182)
T d1v3va2          12 MPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKT--VNSLE   88 (182)
T ss_dssp             HHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS--CSCHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhhhhhccccc--ccHHH
Confidence            36789999996 589999999999987 9999999999999999 6888889999999999999999988643  56666


Q ss_pred             HHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCC-------CCccccchhhhccCcEEEeeccC----
Q 017426          251 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-------HEMTVPLTPAAVREVDVVGVFRY----  319 (372)
Q Consensus       251 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-------~~~~~~~~~~~~~~~~i~~~~~~----  319 (372)
                      .+.+..  .+.++|+|||++|+ +.++.++++|+++|+++.+|...       ....++...+..|++++.++...    
T Consensus        89 ~~~~~~--~~~Gvd~v~D~vG~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~~~~  165 (182)
T d1v3va2          89 EALKKA--SPDGYDCYFDNVGG-EFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQG  165 (182)
T ss_dssp             HHHHHH--CTTCEEEEEESSCH-HHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGGCCH
T ss_pred             HHHHHh--hcCCCceeEEecCc-hhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEeccCh
Confidence            555543  46789999999996 58999999999999999998422       12234556688899999998654    


Q ss_pred             ---CCcHHHHHHHHHcC
Q 017426          320 ---KNTWPLCLELLRSG  333 (372)
Q Consensus       320 ---~~~~~~~~~ll~~g  333 (372)
                         .+.++++++|+++|
T Consensus       166 ~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         166 DVREKALRDLMKWVLEG  182 (182)
T ss_dssp             HHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhCc
Confidence               23467777887765

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.88  E-value=1.3e-22  Score=169.75  Aligned_cols=170  Identities=14%  Similarity=0.240  Sum_probs=134.3

Q ss_pred             CCcccccccc-hhHHHHHHHHh-cCCCCCCEEEEE-CC-CHHHHHHHHHHHHcCCCeEEEEecCh---hHHHHHHHhCCC
Q 017426          164 VSLEEGAMCE-PLSVGVHACRR-ANIGPETNVLIM-GA-GPIGLVTMLAARAFGAPRIVIVDVDD---YRLSVAKEIGAD  236 (372)
Q Consensus       164 ~~~~~aa~~~-~~~~a~~~l~~-~~~~~g~~vlI~-Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~---~~~~~~~~lg~~  236 (372)
                      +|+++||+++ .+.|||+++.. ++++||++++|+ |+ |++|++++|+||.+|++++.++.+.+   ++.+.++++|++
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad   80 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT   80 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc
Confidence            5789999988 77899999965 889999999997 66 99999999999999995444443333   456678899999


Q ss_pred             eEEecCC-CcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCC-CCCccccchhhhccCcEEE
Q 017426          237 NIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG-HHEMTVPLTPAAVREVDVV  314 (372)
Q Consensus       237 ~v~~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~~~~~~~~~i~  314 (372)
                      ++++++. ...++.+.++++....++++|++||++|++ .+..++++|+++|+++.+|.. .....++...+..|++++.
T Consensus        81 ~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~l~~k~~~i~  159 (189)
T d1gu7a2          81 QVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGK-SSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSA  159 (189)
T ss_dssp             EEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHH-HHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEE
T ss_pred             EEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcc-hhhhhhhhhcCCcEEEEECCccCCCccCcHHHHHHCCcEEE
Confidence            9998753 234566677777666678999999999975 789999999999999999854 4445677788888999999


Q ss_pred             eeccC----------CCcHHHHHHHHHcCC
Q 017426          315 GVFRY----------KNTWPLCLELLRSGK  334 (372)
Q Consensus       315 ~~~~~----------~~~~~~~~~ll~~g~  334 (372)
                      |++..          .+.++++++++++|+
T Consensus       160 G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         160 GFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             ECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            97542          245677777777764

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.88  E-value=1.8e-25  Score=185.40  Aligned_cols=157  Identities=17%  Similarity=0.133  Sum_probs=125.9

Q ss_pred             hcceeEEEecCC------ceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCc-------ccCCCccccccee
Q 017426           16 EVNMAAWLLGVN------TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF-------VVKEPMVIGHECA   82 (372)
Q Consensus        16 ~~~~~~~~~~~~------~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~-------~~~~p~~~G~e~~   82 (372)
                      .+|||++++..+      .++..++|.|.|+++||||||+++++|++|++.++|.+....       ....|.++|+|++
T Consensus         2 ~t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~   81 (175)
T d1gu7a1           2 ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGL   81 (175)
T ss_dssp             EEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCE
T ss_pred             ceeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccccc
Confidence            468999988543      345567888889999999999999999999999998653321       1356789999999


Q ss_pred             EEEEEecCCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCC
Q 017426           83 GVIEKVGSEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD  162 (372)
Q Consensus        83 G~V~~vG~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~  162 (372)
                      |+|+++|.++.+++.        ||+|....                           ...|+|+||+.+++++++++|+
T Consensus        82 g~V~~~~~~~~~~~~--------g~~v~~~~---------------------------~~~g~~aey~~v~~~~~~~iP~  126 (175)
T d1gu7a1          82 FEVIKVGSNVSSLEA--------GDWVIPSH---------------------------VNFGTWRTHALGNDDDFIKLPN  126 (175)
T ss_dssp             EEEEEECTTCCSCCT--------TCEEEESS---------------------------SCCCCSBSEEEEEGGGEEEECC
T ss_pred             ccccccccccccccc--------ccceeccc---------------------------cccccccceeeehhhhccCCCc
Confidence            999999999999999        88887532                           2458999999999999999999


Q ss_pred             CCCcccccccchhHHHHHHHH--hcCCCCCCEEEEEC-C-CHHHHHHHHH
Q 017426          163 NVSLEEGAMCEPLSVGVHACR--RANIGPETNVLIMG-A-GPIGLVTMLA  208 (372)
Q Consensus       163 ~~~~~~aa~~~~~~~a~~~l~--~~~~~~g~~vlI~G-a-g~~G~~ai~l  208 (372)
                      +++.+.++.+ ...|||+++.  ..++++|++|||+| + |++|++++|+
T Consensus       127 ~~~~~~a~~~-~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ~  175 (175)
T d1gu7a1         127 PAQSKANGKP-NGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  175 (175)
T ss_dssp             HHHHHHTTCS-CCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             cchhhhhccc-hHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEeC
Confidence            8876665544 3446777764  36799999999996 4 7799988763

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.88  E-value=8.2e-25  Score=178.45  Aligned_cols=149  Identities=20%  Similarity=0.189  Sum_probs=118.2

Q ss_pred             hcceeEEEec---CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEecCCC
Q 017426           16 EVNMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (372)
Q Consensus        16 ~~~~~~~~~~---~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (372)
                      .+|||+++..   ...+++++++.|+|+++||||||+|+|+|++|+..+.|.+.  .....|.++|+|++|+|++  +.+
T Consensus         2 ~~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~--~~~~~~~~~g~e~~G~v~~--~~~   77 (162)
T d1tt7a1           2 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGN--IVREYPLILGIDAAGTVVS--SND   77 (162)
T ss_dssp             CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCT--TCSSCSEECCSEEEEEEEE--CSS
T ss_pred             CcEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeeccc--ccccceeeeeeeccccccc--ccc
Confidence            3578888884   45799999999999999999999999999999998887543  2246688999999999998  556


Q ss_pred             ccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccccccc
Q 017426           93 KTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC  172 (372)
Q Consensus        93 ~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~~aa~~  172 (372)
                      .++++        ||+|...+..-                      +...+|+|+||+.+|+++++++|+++++++|+.+
T Consensus        78 ~~~~~--------g~~v~~~~~~~----------------------g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~  127 (162)
T d1tt7a1          78 PRFAE--------GDEVIATSYEL----------------------GVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVD  127 (162)
T ss_dssp             TTCCT--------TCEEEEESTTB----------------------TTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHS
T ss_pred             ccccc--------ceeeEeeeccc----------------------eeccccccceEEEecHHHEEECCCCCCHHHHHHH
Confidence            78899        88877533211                      1245799999999999999999999999999988


Q ss_pred             ch-hHHHHHHHHhcCCCCCCEEEEECC
Q 017426          173 EP-LSVGVHACRRANIGPETNVLIMGA  198 (372)
Q Consensus       173 ~~-~~~a~~~l~~~~~~~g~~vlI~Ga  198 (372)
                      ++ ..|||.++...+...+++|||+|+
T Consensus       128 ~~~~~ta~~~~~~~~~~~~~~Vli~ga  154 (162)
T d1tt7a1         128 QLLTIVDREVSLEETPGALKDILQNRI  154 (162)
T ss_dssp             CSTTSEEEEECSTTHHHHHHHTTTTCC
T ss_pred             HHHHHHHHHHHHhcCCCCCCEEEEECC
Confidence            74 446776654444445567888776

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=3.3e-22  Score=166.07  Aligned_cols=127  Identities=23%  Similarity=0.315  Sum_probs=112.4

Q ss_pred             CCcccccccc-hhHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEe
Q 017426          164 VSLEEGAMCE-PLSVGVHACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  240 (372)
Q Consensus       164 ~~~~~aa~~~-~~~~a~~~l~~-~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~  240 (372)
                      +|+++||+++ .+.|||+++.+ +++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|++++++
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhcCCeEEEE
Confidence            5889999887 56799999965 78999999999976 8899999999999999 6899999999999999999999998


Q ss_pred             cCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCC
Q 017426          241 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH  296 (372)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  296 (372)
                      ++.  +++.+.+++++  .+.++|++||++|++ .+..++.+++++|+++.++...
T Consensus        80 ~~~--~d~~~~v~~~t--~g~g~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~  130 (179)
T d1qora2          80 YRE--EDLVERLKEIT--GGKKVRVVYDSVGRD-TWERSLDCLQRRGLMVSFGNSS  130 (179)
T ss_dssp             TTT--SCHHHHHHHHT--TTCCEEEEEECSCGG-GHHHHHHTEEEEEEEEECCCTT
T ss_pred             CCC--CCHHHHHHHHh--CCCCeEEEEeCccHH-HHHHHHHHHhcCCeeeeccccc
Confidence            654  78888888875  478899999999975 8999999999999999987543

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=2.1e-22  Score=165.34  Aligned_cols=161  Identities=19%  Similarity=0.186  Sum_probs=129.6

Q ss_pred             Ccccccccch-hHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCC
Q 017426          165 SLEEGAMCEP-LSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  243 (372)
Q Consensus       165 ~~~~aa~~~~-~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~  243 (372)
                      +++.+|.+.+ ..|+|++++++++++|++|||+|+|++|++++|+|+.+|++ +++++.++++.++++++|++.++++.+
T Consensus         5 ~~a~~Apl~Cag~Tay~al~~~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga~-~i~~~~~~~~~~~a~~lGad~~i~~~~   83 (168)
T d1uufa2           5 QLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAH-VVAFTTSEAKREAAKALGADEVVNSRN   83 (168)
T ss_dssp             GHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESSGGGHHHHHHHTCSEEEETTC
T ss_pred             cHHHHHHHHhHHHHHHHHHHHhCCCCCCEEEEeccchHHHHHHHHhhccccc-chhhccchhHHHHHhccCCcEEEECch
Confidence            4556666664 45899999999999999999999999999999999999995 667888999999999999999988643


Q ss_pred             CcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC-CccccchhhhccCcEEEeeccC-CC
Q 017426          244 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KN  321 (372)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~  321 (372)
                        ++..       ....+++|++||++|++..+..+++.++++|+++.+|.... ...++...+..+++++.|+..+ .+
T Consensus        84 --~~~~-------~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~~~~  154 (168)
T d1uufa2          84 --ADEM-------AAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIP  154 (168)
T ss_dssp             --HHHH-------HTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHH
T ss_pred             --hhHH-------HHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcEEEEEeecCHH
Confidence              2211       11256899999999988789999999999999999986544 3355667788899999999765 67


Q ss_pred             cHHHHHHHHHcCCC
Q 017426          322 TWPLCLELLRSGKI  335 (372)
Q Consensus       322 ~~~~~~~ll~~g~~  335 (372)
                      ++++++++++++++
T Consensus       155 d~~e~l~l~a~~~I  168 (168)
T d1uufa2         155 ETQEMLDFCAEHGI  168 (168)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHcCC
Confidence            78999999987654

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.87  E-value=3.2e-22  Score=164.56  Aligned_cols=144  Identities=24%  Similarity=0.415  Sum_probs=118.4

Q ss_pred             CCcccccccc-hhHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEec
Q 017426          164 VSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  241 (372)
Q Consensus       164 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~  241 (372)
                      +++++||+++ ++.|||+++++++++||++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|++.++++
T Consensus         1 ls~eeAA~l~~~~~TA~~al~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~lGa~~~i~~   79 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATY   79 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHHHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccchhhhhhhhccccc-ccccccccccccccccccccceeeeh
Confidence            4789999887 6789999999899999999999987 9999999999999999 58888889999999999999999876


Q ss_pred             CCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCC-CCccccchhhhccCcEEEeeccC
Q 017426          242 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY  319 (372)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~  319 (372)
                      .+    .   ..+.+  .+.++|+|||++|.  .+..++++++++|+++.+|... ....++...+..|++++.++...
T Consensus        80 ~~----~---~~~~~--~~~g~D~v~d~~G~--~~~~~~~~l~~~G~~v~~G~~~g~~~~~~~~~~~~k~~~i~g~~~~  147 (171)
T d1iz0a2          80 AE----V---PERAK--AWGGLDLVLEVRGK--EVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLT  147 (171)
T ss_dssp             GG----H---HHHHH--HTTSEEEEEECSCT--THHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHH
T ss_pred             hh----h---hhhhh--ccccccccccccch--hHHHHHHHHhcCCcEEEEeCCCCCCCCccHHHHHHCCcEEEEEeCc
Confidence            32    2   22222  36789999999883  6789999999999999998654 34467777888999999998643

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.87  E-value=4.5e-21  Score=158.57  Aligned_cols=167  Identities=23%  Similarity=0.300  Sum_probs=132.2

Q ss_pred             Ccccccccch-hHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecC
Q 017426          165 SLEEGAMCEP-LSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  242 (372)
Q Consensus       165 ~~~~aa~~~~-~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~  242 (372)
                      ++++||++++ +.|+|+++ +.+++++|++|||+|+|++|++++|+++..|+.+|++++++++|.++++++|+++++++.
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~   81 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence            5678898885 57999998 568999999999999999999999999999988999999999999999999999998765


Q ss_pred             CCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEc-CCCCCc-cccchhhhccCcEEEeeccC-
Q 017426          243 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEM-TVPLTPAAVREVDVVGVFRY-  319 (372)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g-~~~~~~-~~~~~~~~~~~~~i~~~~~~-  319 (372)
                      +.+....+..+..   .++++|++||++|.+..++.++..++++|+.+.++ ...... .+.......+++++.|+... 
T Consensus        82 ~~~~~~~~~~~~~---~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~  158 (176)
T d2jhfa2          82 DYKKPIQEVLTEM---SNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGG  158 (176)
T ss_dssp             GCSSCHHHHHHHH---TTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             CchhHHHHHHHHH---hcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeC
Confidence            4433333333332   46799999999999988899999998875544444 433333 33334566789999998643 


Q ss_pred             ---CCcHHHHHHHHHcCC
Q 017426          320 ---KNTWPLCLELLRSGK  334 (372)
Q Consensus       320 ---~~~~~~~~~ll~~g~  334 (372)
                         .++++++++++.+|+
T Consensus       159 ~~~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         159 FKSKDSVPKLVADFMAKK  176 (176)
T ss_dssp             CCHHHHHHHHHHHHHTTS
T ss_pred             CCHHHHHHHHHHHHHCcC
Confidence               557888888888875

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.86  E-value=5.7e-21  Score=157.85  Aligned_cols=167  Identities=23%  Similarity=0.332  Sum_probs=135.2

Q ss_pred             Ccccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecC
Q 017426          165 SLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  242 (372)
Q Consensus       165 ~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~  242 (372)
                      ++++||++. .+.|+|+++ +.+++++|++|+|+|+|++|++++++++..|+.+|++++++++|+++++++|+++++++.
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~   81 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN   81 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence            567889888 567899998 568999999999999999999999999999998999999999999999999999999875


Q ss_pred             CCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEE-EEcCCCCCccccchhhhccCcEEEeeccC--
Q 017426          243 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVC-LVGMGHHEMTVPLTPAAVREVDVVGVFRY--  319 (372)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v-~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--  319 (372)
                      +.+ ++.+..++.+  .++++|++||++|+...+..+...++++|..+ ..+........+......+..++.|+...  
T Consensus        82 ~~~-~~~~~~~~~~--~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  158 (175)
T d1cdoa2          82 DHS-EPISQVLSKM--TNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGF  158 (175)
T ss_dssp             GCS-SCHHHHHHHH--HTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSGGGC
T ss_pred             Ccc-hhHHHHHHhh--ccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccCccHHHHHCCcEEEEEEEeCC
Confidence            432 3334444443  36799999999999888888888887775544 45555555566666777788999998643  


Q ss_pred             --CCcHHHHHHHHHcCC
Q 017426          320 --KNTWPLCLELLRSGK  334 (372)
Q Consensus       320 --~~~~~~~~~ll~~g~  334 (372)
                        .++++++++++++|+
T Consensus       159 ~~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         159 KGKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             cHHHHHHHHHHHHHcCC
Confidence              467889999998875

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.86  E-value=1.1e-20  Score=155.87  Aligned_cols=163  Identities=19%  Similarity=0.307  Sum_probs=129.3

Q ss_pred             Ccccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecC
Q 017426          165 SLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  242 (372)
Q Consensus       165 ~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~  242 (372)
                      ++++||+++ .+.|+|+++ +.+++++|++|+|+|+|++|++++|+++.+|+.+|++++.+++|+++++++|+++++++.
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~   82 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPK   82 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECcc
Confidence            578899998 567899997 568999999999999999999999999999988999999999999999999999999865


Q ss_pred             CCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccC-CEEEEEcCCCCCccccch-hhhccCcEEEeeccC-
Q 017426          243 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPLT-PAAVREVDVVGVFRY-  319 (372)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~i~~~~~~-  319 (372)
                      +. .++.+.+.+.+  .+.++|++||++|.......++..+.++ |+++.+|........... ....++.++.|+... 
T Consensus        83 ~~-~~~~~~~~~~~--~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~  159 (176)
T d1d1ta2          83 DS-TKPISEVLSEM--TGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGG  159 (176)
T ss_dssp             GC-SSCHHHHHHHH--HTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             cc-chHHHHHHHHh--ccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEEEeC
Confidence            42 23334444433  4789999999999988888888877655 999999976655444443 345577899998753 


Q ss_pred             ---CCcHHHHHHHH
Q 017426          320 ---KNTWPLCLELL  330 (372)
Q Consensus       320 ---~~~~~~~~~ll  330 (372)
                         .+++.++++++
T Consensus       160 ~~~~~dip~li~~~  173 (176)
T d1d1ta2         160 LKSRDDVPKLVTEF  173 (176)
T ss_dssp             CCHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHH
Confidence               34555555554

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.85  E-value=1.3e-20  Score=157.79  Aligned_cols=162  Identities=20%  Similarity=0.296  Sum_probs=130.0

Q ss_pred             ccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccH
Q 017426          169 GAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI  248 (372)
Q Consensus       169 aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~  248 (372)
                      +++..+++|||++++.+++++|++|||+|+|++|++++++++.+|+.+|++++.+++|.++++++|+++++++  ..+++
T Consensus         5 ~~l~d~~~ta~~a~~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~--~~~~~   82 (195)
T d1kola2           5 TCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLS--LDTPL   82 (195)
T ss_dssp             GGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETT--SSSCH
T ss_pred             HhcccHHHHHHHHHHHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeC--CCcCH
Confidence            3344589999999999999999999999999999999999999999999999999999999999999988764  34788


Q ss_pred             HHHHHHHHHHcCCcceEEEeCCCc---------------HHHHHHHHHHhccCCEEEEEcCCCCCc-------------c
Q 017426          249 AEEVEKIQKAMGTGIDVSFDCAGL---------------NKTMSTALGATCAGGKVCLVGMGHHEM-------------T  300 (372)
Q Consensus       249 ~~~~~~~~~~~~~~~d~vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~~~~~~-------------~  300 (372)
                      .+.+.+++  .+.++|++||++|.               +..++.+++.++++|+++.+|......             .
T Consensus        83 ~~~i~~~t--~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~~~  160 (195)
T d1kola2          83 HEQIAALL--GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLS  160 (195)
T ss_dssp             HHHHHHHH--SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCCC
T ss_pred             HHHHHHHh--CCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCcee
Confidence            88888775  47789999999984               368999999999999999999644321             2


Q ss_pred             ccchhhhccCcEEEeeccC-CCcHHHHHHHHHcCC
Q 017426          301 VPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGK  334 (372)
Q Consensus       301 ~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ll~~g~  334 (372)
                      +....++.|++++.+.... .+.++++++++.+++
T Consensus       161 ~~~~~~~~k~~~i~~g~~~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         161 IRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             CCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTS
T ss_pred             eeHHHHHhhcceeccCCCchHHHHHHHHHHHHcCC
Confidence            3333455677776543222 445677888776653

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=9.9e-21  Score=157.88  Aligned_cols=165  Identities=20%  Similarity=0.259  Sum_probs=122.2

Q ss_pred             CCcccccccchhHHHHHHHH-hcCCCCC--CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhH-HHHHHHhCCCeE
Q 017426          164 VSLEEGAMCEPLSVGVHACR-RANIGPE--TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR-LSVAKEIGADNI  238 (372)
Q Consensus       164 ~~~~~aa~~~~~~~a~~~l~-~~~~~~g--~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~-~~~~~~lg~~~v  238 (372)
                      +|+.+.++-.+..|||++++ .+++++|  ++|||+|+ |++|++++|+|+.+|+++|+++++++++ .++.+++|++.+
T Consensus         2 ~~~~~galg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~v   81 (187)
T d1vj1a2           2 LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAA   81 (187)
T ss_dssp             GGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEE
T ss_pred             ccHHHHHhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEE
Confidence            45666554457889999985 5888987  88999986 9999999999999999878877666655 446678999999


Q ss_pred             EecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC-----Ccccc-----chhhhc
Q 017426          239 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-----EMTVP-----LTPAAV  308 (372)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~-----~~~~~~  308 (372)
                      +++..  +++.+.+++..   ..++|+|||++|+ +.++.++++++++|+++.+|....     +...+     ...+..
T Consensus        82 i~~~~--~~~~~~~~~~~---~~GvDvv~D~vGg-~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~  155 (187)
T d1vj1a2          82 VNYKT--GNVAEQLREAC---PGGVDVYFDNVGG-DISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKE  155 (187)
T ss_dssp             EETTS--SCHHHHHHHHC---TTCEEEEEESSCH-HHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHH
T ss_pred             eeccc--hhHHHHHHHHh---ccCceEEEecCCc-hhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHh
Confidence            98754  67777777763   5789999999997 589999999999999999985321     01111     112456


Q ss_pred             cCcEEEeeccC------CCcHHHHHHHHHcCC
Q 017426          309 REVDVVGVFRY------KNTWPLCLELLRSGK  334 (372)
Q Consensus       309 ~~~~i~~~~~~------~~~~~~~~~ll~~g~  334 (372)
                      |++++.++...      .+.++++.+|+++|+
T Consensus       156 k~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         156 RNITRERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             TTCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             cceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            88888876432      234667777777764

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=3.1e-19  Score=146.56  Aligned_cols=145  Identities=16%  Similarity=0.228  Sum_probs=116.9

Q ss_pred             CCcccccccc-hhHHHHHHH---HhcC-CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCe
Q 017426          164 VSLEEGAMCE-PLSVGVHAC---RRAN-IGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN  237 (372)
Q Consensus       164 ~~~~~aa~~~-~~~~a~~~l---~~~~-~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~  237 (372)
                      +|+.+|+.++ +..|||+++   .... .+.+++|||+|+ |++|++++|+||.+|++ |+++.+++++.+.++++|+++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~-Via~~~~~~k~~~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQ-VVAVSGRESTHEYLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCC-EEEEESCGGGHHHHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCC-eEEEecchhHHHHHHhhcccc
Confidence            4788999887 556888765   3344 445669999987 99999999999999995 788889999999999999999


Q ss_pred             EEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCC-CCccccchhhhccCcEEEee
Q 017426          238 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGV  316 (372)
Q Consensus       238 v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~  316 (372)
                      ++++++  .++.+.+      .....|.++|++|++ .+...+++|+++|+++.+|... ...+.+...+..|++++.|+
T Consensus        80 vi~~~~--~~~~~~l------~~~~~~~vvD~Vgg~-~~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~k~~~i~G~  150 (177)
T d1o89a2          80 VLPRDE--FAESRPL------EKQVWAGAIDTVGDK-VLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGV  150 (177)
T ss_dssp             EEEGGG--SSSCCSS------CCCCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTCSCCCCCSHHHHHHCCEEEEC
T ss_pred             cccccc--HHHHHHH------HhhcCCeeEEEcchH-HHHHHHHHhccccceEeecccCCccccccHHHHHHCCCeEEEE
Confidence            998754  2222211      245689999999975 8999999999999999998654 45677888899999999997


Q ss_pred             cc
Q 017426          317 FR  318 (372)
Q Consensus       317 ~~  318 (372)
                      ..
T Consensus       151 ~~  152 (177)
T d1o89a2         151 DS  152 (177)
T ss_dssp             CS
T ss_pred             ec
Confidence            54

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.77  E-value=1e-18  Score=142.04  Aligned_cols=136  Identities=18%  Similarity=0.245  Sum_probs=109.0

Q ss_pred             HHHH---HHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHH
Q 017426          176 SVGV---HACRR-ANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE  250 (372)
Q Consensus       176 ~~a~---~~l~~-~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~  250 (372)
                      .|||   +++.+ ...+++++|||+|+ |++|++++|+|+.+|+ +|+++.+++++.++++++|++.++++++..   .+
T Consensus         6 lTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~lGad~vi~~~~~~---~~   81 (167)
T d1tt7a2           6 FTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISREDVY---DG   81 (167)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHHHC---SS
T ss_pred             HHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhhcccceEeccchh---ch
Confidence            3555   44543 55677889999987 9999999999999999 588888999999999999999998753211   11


Q ss_pred             HHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCC-CCccccchhhhccCcEEEeeccC
Q 017426          251 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY  319 (372)
Q Consensus       251 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~  319 (372)
                      .+   ..+.++++|+|||++|+. .+..++++|+++|+++.+|... ...+++...+..|++++.|....
T Consensus        82 ~~---~~~~~~gvd~vid~vgg~-~~~~~~~~l~~~G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~~~  147 (167)
T d1tt7a2          82 TL---KALSKQQWQGAVDPVGGK-QLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSV  147 (167)
T ss_dssp             CC---CSSCCCCEEEEEESCCTH-HHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSS
T ss_pred             hh---hcccCCCceEEEecCcHH-HHHHHHHHhccCceEEEeeccCCCcccCCHHHHHHCCcEEEEEecC
Confidence            11   112467899999999985 8999999999999999999654 45688889999999999997654

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.56  E-value=6.6e-14  Score=110.23  Aligned_cols=130  Identities=14%  Similarity=0.030  Sum_probs=94.1

Q ss_pred             cceeEEEec-------CCceeEEEecCCCCCCCcEEEEEeeeeeCcccHHhhhhcccCCcccCCCcccccceeEEEEEec
Q 017426           17 VNMAAWLLG-------VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG   89 (372)
Q Consensus        17 ~~~~~~~~~-------~~~l~~~~~~~p~~~~~evlV~v~~~~~~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   89 (372)
                      .+|+.++..       ++.|++++.++|+|+++|||||+++.+++|.....+..       .+...++..+++|+|++  
T Consensus         3 ~~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~~-------~~~g~~~~g~~vg~Vv~--   73 (147)
T d1v3va1           3 KAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASKR-------LKEGAVMMGQQVARVVE--   73 (147)
T ss_dssp             EEEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGGG-------SCTTSBCCCCEEEEEEE--
T ss_pred             ccEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEcccccccccc-------cccCCccccceEEEEEE--
Confidence            456666662       24699999999999999999999999999875543321       23333566688999988  


Q ss_pred             CCCccccccccccCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcc--
Q 017426           90 SEVKTLVPGDRVTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLE--  167 (372)
Q Consensus        90 ~~v~~~~~gd~v~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~v~~~~~~~~P~~~~~~--  167 (372)
                      ++.++|++        ||+|.+                               .++|+||.+++.+.+.++|+..+..  
T Consensus        74 S~~~~f~~--------GD~V~g-------------------------------~~gw~ey~v~~~~~l~kv~~~~~~~~~  114 (147)
T d1v3va1          74 SKNSAFPA--------GSIVLA-------------------------------QSGWTTHFISDGKGLEKLLTEWPDKKI  114 (147)
T ss_dssp             ESCTTSCT--------TCEEEE-------------------------------CCCSBSEEEECSSSCEECCTTCCTTSS
T ss_pred             eCCCcccC--------CCEEEE-------------------------------ccCCEeEEEeccceeeEcccccccccc
Confidence            67789999        888875                               4789999999999999998764322  


Q ss_pred             ---cccccc-hhHH-HHHHHHhcCCCCCCEEEE
Q 017426          168 ---EGAMCE-PLSV-GVHACRRANIGPETNVLI  195 (372)
Q Consensus       168 ---~aa~~~-~~~~-a~~~l~~~~~~~g~~vlI  195 (372)
                         ..+.+. +..| ||..+ ....+.|++||+
T Consensus       115 ~~~~~~~lG~~Gmtaay~gl-~~~~k~Getvv~  146 (147)
T d1v3va1         115 QYHEHVTKGFENMPAAFIEM-LNGANLGKAVVT  146 (147)
T ss_dssp             CCCEEEEECGGGHHHHHHHH-HTTCCSSEEEEE
T ss_pred             chhhhHhccccchHHHHHHh-hCCCCCCCEEEe
Confidence               233333 4445 45455 333477999987

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.37  E-value=3.8e-13  Score=92.71  Aligned_cols=71  Identities=14%  Similarity=0.212  Sum_probs=61.1

Q ss_pred             CCcccccccc-hhHHHHHHHH----hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC
Q 017426          164 VSLEEGAMCE-PLSVGVHACR----RANIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA  235 (372)
Q Consensus       164 ~~~~~aa~~~-~~~~a~~~l~----~~~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~  235 (372)
                      +|+++|+.++ ...|||.++.    ....+++++|||+|+ |++|.+++|+++.+|+ .|+++.+++++.++++++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHHCCC
Confidence            4788999887 5568887762    366789999999987 9999999999999999 48888899999999999985

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.98  E-value=5.7e-06  Score=64.64  Aligned_cols=97  Identities=20%  Similarity=0.264  Sum_probs=71.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      +..+|+|+|+|.+|+.+++.|+.+|+ .|.+.+.+.++.+.++......+.....+.+    .+.+..    ..+|+||.
T Consensus        31 ~pa~V~ViGaGvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~----~l~~~~----~~aDivI~  101 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNSA----EIETAV----AEADLLIG  101 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCHH----HHHHHH----HTCSEEEE
T ss_pred             CCcEEEEECCChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcccceeehhhhh----hHHHhh----ccCcEEEE
Confidence            46899999999999999999999999 6999999999999888765332222112222    233332    36899999


Q ss_pred             CCCcHH------HHHHHHHHhccCCEEEEEcC
Q 017426          269 CAGLNK------TMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       269 ~~g~~~------~~~~~~~~l~~~G~~v~~g~  294 (372)
                      ++--+.      .-+..++.|++++.++++..
T Consensus       102 aalipG~~aP~lIt~~mv~~Mk~GSVIVDvai  133 (168)
T d1pjca1         102 AVLVPGRRAPILVPASLVEQMRTGSVIVDVAV  133 (168)
T ss_dssp             CCCCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred             eeecCCcccCeeecHHHHhhcCCCcEEEEeec
Confidence            864331      23568899999999999864

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.88  E-value=2e-05  Score=62.43  Aligned_cols=101  Identities=21%  Similarity=0.266  Sum_probs=73.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCC--------------c----ccHHH
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN--------------L----QDIAE  250 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~--------------~----~~~~~  250 (372)
                      +..+|+|+|+|.+|+.+++.|+.+|+ .|.+.+.++++.+.+++++...+......              +    ....+
T Consensus        28 ~pa~VvViGaGvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcCcHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            45799999999999999999999999 79999999999999999986553211000              0    11122


Q ss_pred             HHHHHHHHcCCcceEEEeCCCcHH------HHHHHHHHhccCCEEEEEcC
Q 017426          251 EVEKIQKAMGTGIDVSFDCAGLNK------TMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       251 ~~~~~~~~~~~~~d~vid~~g~~~------~~~~~~~~l~~~G~~v~~g~  294 (372)
                      .+.+..    ...|+||-++--+.      .-+..++.|++++.++++..
T Consensus       107 ~l~~~l----~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvai  152 (183)
T d1l7da1         107 AVLKEL----VKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV  152 (183)
T ss_dssp             HHHHHH----TTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred             HHHHHH----HhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEee
Confidence            232222    47999998764331      23578899999999999863

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.75  E-value=0.00026  Score=59.52  Aligned_cols=81  Identities=25%  Similarity=0.245  Sum_probs=60.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCc-ccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+++++...+ ..|-.+ .+..+.+.+..+. -+++|++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~-~G~iDiL   80 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAFF-QVDLEDERERVRFVEEAAYA-LGRVDVL   80 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTCEEE-ECCTTCHHHHHHHHHHHHHH-HSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeEE-EEeCCCHHHHHHHHHHHHHh-cCCCCeE
Confidence            5889999987 9999999999999999 68888899998888888886543 333322 3334444444332 3689999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      +++.|.
T Consensus        81 VnnAG~   86 (248)
T d2d1ya1          81 VNNAAI   86 (248)
T ss_dssp             EECCCC
T ss_pred             EEeCcC
Confidence            998775

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.61  E-value=0.00015  Score=57.06  Aligned_cols=115  Identities=12%  Similarity=0.065  Sum_probs=72.9

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCeEEecCCCcccHHHHHHHHHHH
Q 017426          180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       180 ~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      ..++..++.++.+|||+|+|+.+.+++..++..|++.+.++.++.++.+.+ +.++...+.   ..              
T Consensus         7 ~~l~~~~~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~---~~--------------   69 (167)
T d1npya1           7 KLIEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYIN---SL--------------   69 (167)
T ss_dssp             HHHHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEES---CC--------------
T ss_pred             HHHHHcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhh---cc--------------
Confidence            345667777889999999999999999999999998888999999887755 456654321   10              


Q ss_pred             cCCcceEEEeCCCcH-----HH--HHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcE
Q 017426          259 MGTGIDVSFDCAGLN-----KT--MSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD  312 (372)
Q Consensus       259 ~~~~~d~vid~~g~~-----~~--~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  312 (372)
                      ....+|++|+|+.-.     ..  +......+.+...++.+-..+.. +..++..-.++..
T Consensus        70 ~~~~~DliINaTpiGm~~~~~~~~l~~~~~~~~~~~~v~D~vY~P~~-T~ll~~A~~~G~~  129 (167)
T d1npya1          70 ENQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVE-TPFIRYAQARGKQ  129 (167)
T ss_dssp             TTCCCSEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCSSSS-CHHHHHHHHTTCE
T ss_pred             cccchhhheeccccCCccccccccccccHhhcCCcceEEEEeeccCC-CHHHHHHHHCCCe
Confidence            024689999987521     00  01112334555555665443333 3344444444444

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.60  E-value=7.3e-05  Score=61.53  Aligned_cols=106  Identities=21%  Similarity=0.258  Sum_probs=72.2

Q ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHH
Q 017426          178 GVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEV  252 (372)
Q Consensus       178 a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~  252 (372)
                      ...+++..++++|++||-.|+|. |..++.+++..|. ..|++++.+++..+.+++    .+...+........+   . 
T Consensus        64 ~a~~l~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~---~-  138 (213)
T d1dl5a1          64 MALFMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYY---G-  138 (213)
T ss_dssp             HHHHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG---C-
T ss_pred             hHHHHHhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHH---c-
Confidence            33466888999999999999865 7888888888763 368999999987776654    454443322111100   0 


Q ss_pred             HHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEE
Q 017426          253 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       253 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  292 (372)
                        +.  ..+.||+|+.+.+-....+..++.|+|+|+++..
T Consensus       139 --~~--~~~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         139 --VP--EFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             --CG--GGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             --cc--cccchhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence              00  1357999998765543446678899999999873

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.57  E-value=5.2e-05  Score=62.36  Aligned_cols=105  Identities=18%  Similarity=0.209  Sum_probs=73.9

Q ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHH----HHHhCCCeEEecCCC-cccHHHH
Q 017426          177 VGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV----AKEIGADNIVKVSTN-LQDIAEE  251 (372)
Q Consensus       177 ~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~----~~~lg~~~v~~~~~~-~~~~~~~  251 (372)
                      +...+++..++++|++||.+|+| .|..++.+++..|. .|++++.+++-.+.    ++++|.+.+.....+ ...+   
T Consensus        66 ~~a~ml~~L~l~~g~~VLeIGsG-sGY~taila~l~g~-~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~---  140 (215)
T d1jg1a_          66 MVAIMLEIANLKPGMNILEVGTG-SGWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF---  140 (215)
T ss_dssp             HHHHHHHHHTCCTTCCEEEECCT-TSHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC---
T ss_pred             hHHHHHHhhccCccceEEEecCC-CChhHHHHHHhhCc-eeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCC---
Confidence            44456788889999999999875 37888888887785 58899898875554    445787665443221 1111   


Q ss_pred             HHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEE
Q 017426          252 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  292 (372)
                            ....+||.|+-+.+....-...++.|+++|+++..
T Consensus       141 ------~~~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         141 ------PPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             ------GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ------cccCcceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence                  02478999998766654456788899999999874

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.42  E-value=0.00047  Score=53.62  Aligned_cols=73  Identities=18%  Similarity=0.360  Sum_probs=55.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      -.+.+|||+|+|.+|.++++.+...|++.+.++.++.++.+ +++++|... ..+    .++.+.+        ..+|+|
T Consensus        22 l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~-~~~----~~~~~~l--------~~~Div   88 (159)
T d1gpja2          22 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA-VRF----DELVDHL--------ARSDVV   88 (159)
T ss_dssp             CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE-CCG----GGHHHHH--------HTCSEE
T ss_pred             cccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhccc-ccc----hhHHHHh--------ccCCEE
Confidence            46789999999999999999999999988889988877654 677888542 222    2333322        479999


Q ss_pred             EeCCCcH
Q 017426          267 FDCAGLN  273 (372)
Q Consensus       267 id~~g~~  273 (372)
                      |.|++++
T Consensus        89 i~atss~   95 (159)
T d1gpja2          89 VSATAAP   95 (159)
T ss_dssp             EECCSSS
T ss_pred             EEecCCC
Confidence            9999875

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.40  E-value=0.001  Score=55.50  Aligned_cols=104  Identities=19%  Similarity=0.262  Sum_probs=69.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCe-EEecCCC-cccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-v~~~~~~-~~~~~~~~~~~~~~~~~~~d  264 (372)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++... .+..|-. .++..+.+.+..+ ..+++|
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-~~g~iD   80 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRA-EFGEVD   80 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHH-HTCSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhc-ccCCcc
Confidence            4788999987 9999999999999999 578888888876644 5566432 2223322 2334444444443 246899


Q ss_pred             EEEeCCCcH-------------------------HHHHHHHHHhc--cCCEEEEEcC
Q 017426          265 VSFDCAGLN-------------------------KTMSTALGATC--AGGKVCLVGM  294 (372)
Q Consensus       265 ~vid~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g~  294 (372)
                      +++++.|..                         ...+.+++.|.  .+|+++.++.
T Consensus        81 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS  137 (243)
T d1q7ba_          81 ILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGS  137 (243)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             eehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecc
Confidence            999987653                         12344666663  4689888863

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.37  E-value=0.00075  Score=56.40  Aligned_cols=81  Identities=25%  Similarity=0.314  Sum_probs=57.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCeEEecCCC-cccHHHHHHHHHHHcCCcceE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~d~  265 (372)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ +++++..+ ..|-. .++..+.+.+..+. -+++|+
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~-~g~iDi   80 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPV-VMDVADPASVERGFAEALAH-LGRLDG   80 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEE-ECCTTCHHHHHHHHHHHHHH-HSSCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCeEE-EEecCCHHHHHHHHHHHHHh-cCCceE
Confidence            4788999987 9999999999999999 588888988877654 55665443 33332 23344444444433 357999


Q ss_pred             EEeCCCc
Q 017426          266 SFDCAGL  272 (372)
Q Consensus       266 vid~~g~  272 (372)
                      ++++.|.
T Consensus        81 lVnnAG~   87 (242)
T d1ulsa_          81 VVHYAGI   87 (242)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9998775

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.36  E-value=0.00035  Score=57.61  Aligned_cols=101  Identities=19%  Similarity=0.208  Sum_probs=69.0

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC--CCeEEe-cCCCcccHHHHHHHHH
Q 017426          180 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG--ADNIVK-VSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       180 ~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg--~~~v~~-~~~~~~~~~~~~~~~~  256 (372)
                      .+++...+++|++||-.|+| .|..++.+++.. . .|++++.+++..+.+++.-  ...+.. ..+....+.       
T Consensus        61 ~ml~~L~l~~g~~VLdIG~G-sGy~ta~La~l~-~-~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~~-------  130 (224)
T d1vbfa_          61 FMLDELDLHKGQKVLEIGTG-IGYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE-------  130 (224)
T ss_dssp             HHHHHTTCCTTCEEEEECCT-TSHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG-------
T ss_pred             HHHHHhhhcccceEEEecCC-CCHHHHHHHHHh-c-ccccccccHHHHHHHHHHHhcccccccccCchhhcch-------
Confidence            46778899999999999976 477777777764 3 6999999999888876642  222211 111111111       


Q ss_pred             HHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEE
Q 017426          257 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  292 (372)
                        ..++||.|+-+.+.+......++.|+++|+++..
T Consensus       131 --~~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~p  164 (224)
T d1vbfa_         131 --EEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILP  164 (224)
T ss_dssp             --GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             --hhhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEE
Confidence              1367999987655554556678899999998874

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.35  E-value=0.00025  Score=59.56  Aligned_cols=103  Identities=17%  Similarity=0.219  Sum_probs=68.6

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHHH----hC-CCeEEecCCCcccHHHHHHH
Q 017426          181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKE----IG-ADNIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       181 ~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~~----lg-~~~v~~~~~~~~~~~~~~~~  254 (372)
                      .+...+++||++||=.|+|. |.++..+|+..|. ..|++++.+++..+.+++    ++ ...+....   .|+.+.+  
T Consensus        77 Ii~~l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~---~Di~~~~--  150 (250)
T d1yb2a1          77 IIMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSR---SDIADFI--  150 (250)
T ss_dssp             ----CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEEC---SCTTTCC--
T ss_pred             HHHHcCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEE---eeeeccc--
Confidence            35678999999999998754 6777788887653 379999999998887765    22 33332211   1221111  


Q ss_pred             HHHHcCCcceEEE-eCCCcHHHHHHHHHHhccCCEEEEEc
Q 017426          255 IQKAMGTGIDVSF-DCAGLNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       255 ~~~~~~~~~d~vi-d~~g~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                          ....||.|| |.......+..+.+.|+|+|+++.+.
T Consensus       151 ----~~~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~  186 (250)
T d1yb2a1         151 ----SDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYL  186 (250)
T ss_dssp             ----CSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             ----ccceeeeeeecCCchHHHHHHHHHhcCCCceEEEEe
Confidence                246799887 44443457788999999999998864

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.34  E-value=0.0014  Score=55.03  Aligned_cols=104  Identities=17%  Similarity=0.263  Sum_probs=69.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCCCeEE-ecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGADNIV-KVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~~~v~-~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+. .++++..... ..|-.+ .+..+.+.+..+ ..+++|
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~-~~g~iD   82 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQR-RLGTLN   82 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHH-HHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHH-HhCCCC
Confidence            4788999987 9999999999999999 58888898877664 4667754432 223222 333334444333 236899


Q ss_pred             EEEeCCCcH----------H---------------HHHHHHHHhc-cCCEEEEEcC
Q 017426          265 VSFDCAGLN----------K---------------TMSTALGATC-AGGKVCLVGM  294 (372)
Q Consensus       265 ~vid~~g~~----------~---------------~~~~~~~~l~-~~G~~v~~g~  294 (372)
                      +++++.|..          +               ..+.+++.|+ .+|+++.++.
T Consensus        83 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS  138 (253)
T d1hxha_          83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMAS  138 (253)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred             eEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccc
Confidence            999988753          1               2334566665 4688888764

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.33  E-value=0.0021  Score=46.57  Aligned_cols=94  Identities=13%  Similarity=0.005  Sum_probs=61.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh--hHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD--YRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~--~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .|.+|||.|+|.+|..-++.+...|++ +++++...  +-..+++.-+.. .+.-.....+            -.++++|
T Consensus        11 ~~k~vlVvG~G~va~~ka~~ll~~ga~-v~v~~~~~~~~~~~~~~~~~i~-~~~~~~~~~d------------l~~~~lv   76 (113)
T d1pjqa1          11 RDRDCLIVGGGDVAERKARLLLEAGAR-LTVNALTFIPQFTVWANEGMLT-LVEGPFDETL------------LDSCWLA   76 (113)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTBE-EEEEESSCCHHHHHHHTTTSCE-EEESSCCGGG------------GTTCSEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCe-EEEEeccCChHHHHHHhcCCce-eeccCCCHHH------------hCCCcEE
Confidence            478999999999999999999999995 55553332  222333332222 2221111112            2578999


Q ss_pred             EeCCCcHHHHHHHHHHhccCCEEEEEcCCC
Q 017426          267 FDCAGLNKTMSTALGATCAGGKVCLVGMGH  296 (372)
Q Consensus       267 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~  296 (372)
                      +.+.+....-.......+..|.++-+...+
T Consensus        77 ~~at~d~~~n~~i~~~a~~~~ilVNv~D~p  106 (113)
T d1pjqa1          77 IAATDDDTVNQRVSDAAESRRIFCNVVDAP  106 (113)
T ss_dssp             EECCSCHHHHHHHHHHHHHTTCEEEETTCT
T ss_pred             eecCCCHHHHHHHHHHHHHcCCEEEeCCCh
Confidence            999988755557778888889888775543

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=0.0028  Score=52.86  Aligned_cols=83  Identities=24%  Similarity=0.329  Sum_probs=56.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH----HHhCCC-eEEecCCCcc-cHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTNLQ-DIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~v~~~~~~~~-~~~~~~~~~~~~~~~  261 (372)
                      .|+.+||+|+ +++|..++.-+...|+ +|+.+++++++.+.+    +..|.. ..+..|-.+. +..+.+++..+ ..+
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~-~~g   83 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA-EIG   83 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH-HTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH-HcC
Confidence            5889999998 9999999999999999 588888998876543    334433 2233343333 33334444433 246


Q ss_pred             cceEEEeCCCcH
Q 017426          262 GIDVSFDCAGLN  273 (372)
Q Consensus       262 ~~d~vid~~g~~  273 (372)
                      .+|+++++.|..
T Consensus        84 ~idilinnag~~   95 (244)
T d1yb1a_          84 DVSILVNNAGVV   95 (244)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCceeEeecccc
Confidence            799999988764

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.27  E-value=0.0012  Score=55.75  Aligned_cols=84  Identities=15%  Similarity=0.213  Sum_probs=57.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH----HHHhCCCe-EEecCCCccc-HHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV----AKEIGADN-IVKVSTNLQD-IAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~----~~~lg~~~-v~~~~~~~~~-~~~~~~~~~~~~~~  261 (372)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.    +++.+... .+..|-.+.+ ..+.+.++.+..++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g   83 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   83 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            5889999987 9999999999999999 68888898876553    33345433 2333433333 33334444443346


Q ss_pred             cceEEEeCCCcH
Q 017426          262 GIDVSFDCAGLN  273 (372)
Q Consensus       262 ~~d~vid~~g~~  273 (372)
                      .+|+++++.|..
T Consensus        84 ~idilinnag~~   95 (258)
T d1ae1a_          84 KLNILVNNAGVV   95 (258)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CcEEEecccccc
Confidence            799999987753

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.26  E-value=0.0017  Score=54.67  Aligned_cols=84  Identities=19%  Similarity=0.297  Sum_probs=55.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh---CCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      +|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ +++   +.. ..+..|-.+ ++..+.+.+..+..++
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   85 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   85 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCC
Confidence            4789999987 9999999999999999 688888888775543 332   322 122223222 3334444444433346


Q ss_pred             cceEEEeCCCcH
Q 017426          262 GIDVSFDCAGLN  273 (372)
Q Consensus       262 ~~d~vid~~g~~  273 (372)
                      .+|+++++.|..
T Consensus        86 ~idilvnnAG~~   97 (259)
T d1xq1a_          86 KLDILINNLGAI   97 (259)
T ss_dssp             CCSEEEEECCC-
T ss_pred             Cccccccccccc
Confidence            799999988763

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=0.00099  Score=55.93  Aligned_cols=82  Identities=21%  Similarity=0.228  Sum_probs=57.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH-hCCCeEEecCCCc-ccHHHHHHHHHHHcCCcceE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~-lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~  265 (372)
                      .|+++||+|+ +++|.++++.+...|+ .|+.+++++++.+.+.+ ++....+..|-.+ ++..+.+.+..+. -+++|+
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~-~g~iDi   82 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRR-FGRLDC   82 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH-HSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHh-cCCCCE
Confidence            5889999987 9999999999999999 58888899888776654 4433333333322 3333444444332 368999


Q ss_pred             EEeCCCc
Q 017426          266 SFDCAGL  272 (372)
Q Consensus       266 vid~~g~  272 (372)
                      ++++.|.
T Consensus        83 lVnnAG~   89 (250)
T d1ydea1          83 VVNNAGH   89 (250)
T ss_dssp             EEECCCC
T ss_pred             EEecccc
Confidence            9998874

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.26  E-value=0.0029  Score=52.95  Aligned_cols=104  Identities=13%  Similarity=0.238  Sum_probs=68.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-----HHHhCCCeE-EecCCC-cccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-----AKEIGADNI-VKVSTN-LQDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-----~~~lg~~~v-~~~~~~-~~~~~~~~~~~~~~~~  260 (372)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.     .++.|.... +..|-. ..+..+.+.+..+. .
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   81 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK-F   81 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence            4788999987 9999999999999999 58888888776442     344564432 223322 23344444444332 3


Q ss_pred             CcceEEEeCCCcH-------------------------HHHHHHHHHhc--cCCEEEEEcC
Q 017426          261 TGIDVSFDCAGLN-------------------------KTMSTALGATC--AGGKVCLVGM  294 (372)
Q Consensus       261 ~~~d~vid~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g~  294 (372)
                      +++|+++++.|..                         ...+.+++.|.  .+|+++.++.
T Consensus        82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S  142 (251)
T d1vl8a_          82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS  142 (251)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccccccccccccc
Confidence            5899999988753                         12344666774  3578888863

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=0.00079  Score=56.32  Aligned_cols=80  Identities=28%  Similarity=0.238  Sum_probs=56.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ ++++....+..|-.++   +.++++.+. -+++|++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~---~~v~~~~~~-~g~iDil   80 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGDW---EATERALGS-VGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCH---HHHHHHHTT-CCCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH---HHHHHHHHH-hCCceEE
Confidence            6889999987 9999999999999999 688888988876644 5565444444443332   234444432 3689999


Q ss_pred             EeCCCcH
Q 017426          267 FDCAGLN  273 (372)
Q Consensus       267 id~~g~~  273 (372)
                      +++.|..
T Consensus        81 VnnAg~~   87 (244)
T d1pr9a_          81 VNNAAVA   87 (244)
T ss_dssp             EECCCCC
T ss_pred             Eeccccc
Confidence            9987653

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=0.0021  Score=54.43  Aligned_cols=83  Identities=17%  Similarity=0.131  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH-----hCCCe-EEecCCCcccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-----IGADN-IVKVSTNLQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~-----lg~~~-v~~~~~~~~~~~~~~~~~~~~~~~  261 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+.+++++++.+.+.+     .+... ....+....+..+.+.+......+
T Consensus        13 ~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          13 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            5789999998 9999999999999999 68888899888765432     23222 222222222322222222222346


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ..|+++++.|.
T Consensus        92 ~~~~li~nag~  102 (269)
T d1xu9a_          92 GLDMLILNHIT  102 (269)
T ss_dssp             SCSEEEECCCC
T ss_pred             Ccccccccccc
Confidence            78988886654

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.14  E-value=0.0011  Score=53.07  Aligned_cols=76  Identities=13%  Similarity=0.241  Sum_probs=51.7

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-Hh----CCCeEEecCCCcccHHHHHHHHHHHcCC
Q 017426          188 GPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EI----GADNIVKVSTNLQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       188 ~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~l----g~~~v~~~~~~~~~~~~~~~~~~~~~~~  261 (372)
                      =+|.++||+|+ |++|..+++.+...|+ +|+.+.+++++.+.+. .+    ... +...+-.+   .+.+.+.    -+
T Consensus        21 l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~d~~~---~~~~~~~----~~   91 (191)
T d1luaa1          21 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVN-VTAAETAD---DASRAEA----VK   91 (191)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCC-CEEEECCS---HHHHHHH----TT
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhccchh-hhhhhccc---HHHHHHH----hc
Confidence            37899999997 9999999999999999 5888888887765443 22    222 11111111   1233333    26


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|++|++.|.
T Consensus        92 ~iDilin~Ag~  102 (191)
T d1luaa1          92 GAHFVFTAGAI  102 (191)
T ss_dssp             TCSEEEECCCT
T ss_pred             CcCeeeecCcc
Confidence            79999999774

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.13  E-value=0.0018  Score=54.53  Aligned_cols=104  Identities=18%  Similarity=0.249  Sum_probs=68.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH----HHHHhCCCeE-EecCCC-cccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS----VAKEIGADNI-VKVSTN-LQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~----~~~~lg~~~v-~~~~~~-~~~~~~~~~~~~~~~~~  261 (372)
                      .|+++||+|+ +++|.+.++.+...|+++++...++++..+    .+++.|.... +..|-. .++..+.+.+..+. .+
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~-~g   83 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH-FG   83 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH-cC
Confidence            5889999987 999999999999999964444556655533    3445565432 333332 23344444444432 35


Q ss_pred             cceEEEeCCCcH-------------------------HHHHHHHHHhccCCEEEEEc
Q 017426          262 GIDVSFDCAGLN-------------------------KTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       262 ~~d~vid~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ++|+++++.|..                         ...+.++..|+.+|..+.+.
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~  140 (259)
T d1ja9a_          84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTS  140 (259)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccc
Confidence            799999988764                         13445677788888877764

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.12  E-value=0.0014  Score=54.75  Aligned_cols=83  Identities=22%  Similarity=0.232  Sum_probs=57.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCe-EEecCCC-cccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-v~~~~~~-~~~~~~~~~~~~~~~~~~~d  264 (372)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ ++++... .+..|-. .++..+.+++..+. .+++|
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~id   82 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTA-FGGLH   82 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHH-hCCCe
Confidence            5789999987 9999999999999999 588888988876644 5565322 2222322 23344444444432 35799


Q ss_pred             EEEeCCCcH
Q 017426          265 VSFDCAGLN  273 (372)
Q Consensus       265 ~vid~~g~~  273 (372)
                      +++++.|..
T Consensus        83 ilinnAG~~   91 (244)
T d1nffa_          83 VLVNNAGIL   91 (244)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCccc
Confidence            999988763

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=0.00074  Score=56.57  Aligned_cols=80  Identities=18%  Similarity=0.265  Sum_probs=56.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      .|+++||+|+ +++|.++++.+...|+ .|+.+++++++.+.+.+.........+....+..+..   .+ .-+.+|+++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~---~~-~~~~id~lV   79 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQF---AN-EVERLDVLF   79 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHH---HH-HCSCCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhccCCceeeeecccccccccc---cc-ccccceeEE
Confidence            5788999987 9999999999999999 6888889988877665544333333343333333332   22 246899999


Q ss_pred             eCCCcH
Q 017426          268 DCAGLN  273 (372)
Q Consensus       268 d~~g~~  273 (372)
                      ++.|..
T Consensus        80 n~ag~~   85 (245)
T d2ag5a1          80 NVAGFV   85 (245)
T ss_dssp             ECCCCC
T ss_pred             eccccc
Confidence            987753

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=0.00081  Score=55.44  Aligned_cols=106  Identities=16%  Similarity=0.142  Sum_probs=69.5

Q ss_pred             HHHHHHHhc--CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHH----hCC-----CeEEe-cCC
Q 017426          177 VGVHACRRA--NIGPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGA-----DNIVK-VST  243 (372)
Q Consensus       177 ~a~~~l~~~--~~~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~----lg~-----~~v~~-~~~  243 (372)
                      +...+++..  .+++|++||-.|+|. |..++.+++..| ...|++++.+++-.+.+++    .+.     ..+.. ..+
T Consensus        62 ~~a~~le~L~~~l~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD  140 (224)
T d1i1na_          62 MHAYALELLFDQLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD  140 (224)
T ss_dssp             HHHHHHHHTTTTSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC
T ss_pred             HHHHHHHHHhhccCCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEee
Confidence            344566654  789999999999753 788888888765 3379999999987666533    222     11111 111


Q ss_pred             CcccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEE
Q 017426          244 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  292 (372)
                      ....+         .....||.|+.+..........++.|+++|+++..
T Consensus       141 ~~~~~---------~~~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         141 GRMGY---------AEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             GGGCC---------GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ccccc---------chhhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence            00000         01368999997766554556788999999999874

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.08  E-value=0.0009  Score=56.66  Aligned_cols=108  Identities=18%  Similarity=0.208  Sum_probs=74.2

Q ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHH
Q 017426          177 VGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEE  251 (372)
Q Consensus       177 ~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~  251 (372)
                      -+.+.+..++++||++||=.|+|. |.+++.+|+..|. ..|++++.+++..+.+++    +|....+....  .+....
T Consensus        91 d~~~Ii~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~--~d~~~~  167 (266)
T d1o54a_          91 DSSFIAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKV--RDISEG  167 (266)
T ss_dssp             HHHHHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEEC--CCGGGC
T ss_pred             HHHHHHHhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEe--cccccc
Confidence            344566789999999999999864 7778888888753 279999999998777654    55422222111  111110


Q ss_pred             HHHHHHHcCCcceEEEeCCCcH-HHHHHHHHHhccCCEEEEEc
Q 017426          252 VEKIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g  293 (372)
                            .....+|.||-....+ ..+..+.+.|+|+|+++.+.
T Consensus       168 ------~~~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~  204 (266)
T d1o54a_         168 ------FDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  204 (266)
T ss_dssp             ------CSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             ------ccccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence                  1245689887555543 57789999999999998764

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.07  E-value=0.002  Score=54.57  Aligned_cols=82  Identities=24%  Similarity=0.382  Sum_probs=56.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCC---CeEEecCCC-cccHHHHHHHHHHHcCCc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGA---DNIVKVSTN-LQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~---~~v~~~~~~-~~~~~~~~~~~~~~~~~~  262 (372)
                      .|+.+||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ ++++.   ...+..|-. .++..+.+.+..+. .+.
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~   82 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAK-HGK   82 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH-HSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence            5788999987 9999999999999999 588888888876644 45542   222333322 23444444444432 368


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|+++++.|.
T Consensus        83 iD~lVnnAG~   92 (268)
T d2bgka1          83 LDIMFGNVGV   92 (268)
T ss_dssp             CCEEEECCCC
T ss_pred             cceecccccc
Confidence            9999998763

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.06  E-value=0.0014  Score=55.09  Aligned_cols=82  Identities=26%  Similarity=0.281  Sum_probs=57.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCCCeE-EecCCC-cccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNI-VKVSTN-LQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~~~v-~~~~~~-~~~~~~~~~~~~~~~~~~~d  264 (372)
                      +|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+ .++++|.... +..|-. .++..+.+.+..+. .+++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~-~g~iD   81 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDR-WGSID   81 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHH-hCCcc
Confidence            4788999987 9999999999999999 5888888887765 5567875442 222322 23344444444332 36899


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      +++++.|.
T Consensus        82 ilVnnAg~   89 (256)
T d1k2wa_          82 ILVNNAAL   89 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEeeccc
Confidence            99998875

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.06  E-value=0.0019  Score=53.82  Aligned_cols=79  Identities=30%  Similarity=0.237  Sum_probs=55.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .|.++||+|+ +++|.++++.+...|+ +|+.+++++++.+. .++++....+..|-.+++   .+++..+. -+++|++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~---~v~~~~~~-~g~iDil   78 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWD---ATEKALGG-IGPVDLL   78 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHH---HHHHHHTT-CCCCSEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHH---HHHHHHHH-cCCCeEE
Confidence            4889999987 9999999999999999 58888888877654 455554334444433322   34444332 3689999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      +++.|.
T Consensus        79 VnnAg~   84 (242)
T d1cyda_          79 VNNAAL   84 (242)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            998774

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.06  E-value=0.0015  Score=54.82  Aligned_cols=82  Identities=26%  Similarity=0.308  Sum_probs=56.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCCCe-EEecCCC-cccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~~~-v~~~~~~-~~~~~~~~~~~~~~~~~~~d  264 (372)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+. +++++... .+..|-. .++..+.+.+..+. .+++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~iD   81 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREE-FGSVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHH-cCCcc
Confidence            4789999987 9999999999999999 58888888877664 45666332 2223322 23344444444332 35899


Q ss_pred             EEEeCCCc
Q 017426          265 VSFDCAGL  272 (372)
Q Consensus       265 ~vid~~g~  272 (372)
                      +++++.|.
T Consensus        82 ilVnnAg~   89 (254)
T d1hdca_          82 GLVNNAGI   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEecCcc
Confidence            99998765

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.05  E-value=0.0022  Score=54.02  Aligned_cols=83  Identities=13%  Similarity=0.198  Sum_probs=55.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HH---hCCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KE---IGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ ++   .+... .+..|-.+ .+..+.+.+..+..++
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   85 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   85 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            5889999987 9999999999999999 588888888776533 33   34322 22233222 3333344444333345


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|+++++.|.
T Consensus        86 ~idilvnnAG~   96 (259)
T d2ae2a_          86 KLNILVNNAGI   96 (259)
T ss_dssp             CCCEEEECCCC
T ss_pred             CceEEEECCce
Confidence            79999998875

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=0.0023  Score=54.34  Aligned_cols=104  Identities=23%  Similarity=0.287  Sum_probs=63.0

Q ss_pred             CCCEE-EEECC-CHHHHHHHH-HHHHcCCCeEEEEecChhHHHHH-HH---hCCC-eEEecCCCccc-HHHHHHHHHHHc
Q 017426          189 PETNV-LIMGA-GPIGLVTML-AARAFGAPRIVIVDVDDYRLSVA-KE---IGAD-NIVKVSTNLQD-IAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~v-lI~Ga-g~~G~~ai~-l~~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~v~~~~~~~~~-~~~~~~~~~~~~  259 (372)
                      .|.+| ||+|+ +++|.++++ |++..|+ .|+.+.+++++.+.+ ++   .+.. ..+..|-.+.+ ..+...++.+. 
T Consensus         1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~-   78 (275)
T d1wmaa1           1 SGIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKE-   78 (275)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHh-
Confidence            36788 66787 999998776 4555577 688888888875533 33   3422 23333333222 22333333332 


Q ss_pred             CCcceEEEeCCCcH----------H---------------HHHHHHHHhccCCEEEEEcC
Q 017426          260 GTGIDVSFDCAGLN----------K---------------TMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       260 ~~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~  294 (372)
                      .+++|++|+..|..          +               ..+.++..|++.|+++.++.
T Consensus        79 ~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS  138 (275)
T d1wmaa1          79 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS  138 (275)
T ss_dssp             HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred             cCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence            36899999988752          1               23335556677899888753

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.98  E-value=0.0047  Score=52.27  Aligned_cols=104  Identities=20%  Similarity=0.256  Sum_probs=67.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecC-hhHHH----HHHHhCCCeEE-ecCCC-cccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD-DYRLS----VAKEIGADNIV-KVSTN-LQDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~-~~~~~----~~~~lg~~~v~-~~~~~-~~~~~~~~~~~~~~~~  260 (372)
                      .|+++||+|+ +++|.++++.+...|++ |+.++++ ++..+    .+++.+.+... ..|-. .++..+.+.+..+. .
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~-Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~-~   94 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCK-VIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI-F   94 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHH-h
Confidence            3789999987 99999999999999995 6666554 44433    33455544332 23322 23444555544443 3


Q ss_pred             CcceEEEeCCCcH-------------------------HHHHHHHHHhccCCEEEEEcC
Q 017426          261 TGIDVSFDCAGLN-------------------------KTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       261 ~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      +++|+++++.|..                         ...+.++..|...|+.+.++.
T Consensus        95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s  153 (272)
T d1g0oa_          95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS  153 (272)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred             CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccc
Confidence            5899999987653                         134457777888898888753

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.97  E-value=0.0032  Score=53.97  Aligned_cols=82  Identities=15%  Similarity=0.177  Sum_probs=54.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-----HHHhCCCe-EEecCCCcccHH-HHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-----AKEIGADN-IVKVSTNLQDIA-EEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-----~~~lg~~~-v~~~~~~~~~~~-~~~~~~~~~~~  260 (372)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.     .++.|... .+..+-.+.+-. +.+.... ...
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~-~~~  101 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI-KVA  101 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH-HHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhh-hhc
Confidence            4789999987 9999999999999999 68888888876442     23344332 333343333322 2233322 236


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|+++++.|.
T Consensus       102 g~iDilvnnAg~  113 (294)
T d1w6ua_         102 GHPNIVINNAAG  113 (294)
T ss_dssp             CSCSEEEECCCC
T ss_pred             cccchhhhhhhh
Confidence            789999998875

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.97  E-value=0.0063  Score=50.78  Aligned_cols=81  Identities=17%  Similarity=0.218  Sum_probs=54.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH----HHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      ++.+||+|+ +++|.++++.+...|+ .|+.+++++++.+.+    ++.|... .+..|-.+ ++..+.+.+..+ ..++
T Consensus        10 nKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~-~~g~   87 (251)
T d2c07a1          10 NKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT-EHKN   87 (251)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH-HCSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-hcCC
Confidence            567888987 9999999999989999 688888888776543    3344332 22233222 334444444433 3568


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|+++++.|.
T Consensus        88 iDilvnnag~   97 (251)
T d2c07a1          88 VDILVNNAGI   97 (251)
T ss_dssp             CCEEEECCCC
T ss_pred             ceeeeecccc
Confidence            9999998765

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.0023  Score=53.76  Aligned_cols=82  Identities=22%  Similarity=0.298  Sum_probs=55.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-H---HhCCC-eE--EecCCC-cccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGAD-NI--VKVSTN-LQDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~---~lg~~-~v--~~~~~~-~~~~~~~~~~~~~~~  259 (372)
                      +|+.+||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ +   +.+.. .+  +..|-. .++..+.+....+. 
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~-   86 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ-   86 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            4678999987 9999999999999999 588888988876643 2   23322 22  223322 23444444444432 


Q ss_pred             CCcceEEEeCCCc
Q 017426          260 GTGIDVSFDCAGL  272 (372)
Q Consensus       260 ~~~~d~vid~~g~  272 (372)
                      -+++|++|++.|.
T Consensus        87 ~g~iD~lVnnAg~   99 (257)
T d1xg5a_          87 HSGVDICINNAGL   99 (257)
T ss_dssp             HCCCSEEEECCCC
T ss_pred             cCCCCEEEecccc
Confidence            3679999998876

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.92  E-value=0.0024  Score=53.51  Aligned_cols=82  Identities=18%  Similarity=0.172  Sum_probs=55.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCC---CeEEecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGA---DNIVKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~---~~v~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      .|+++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++++.   ...+..|-.+ .+..+.+.+..+. .++
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~G~   82 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKA-FGP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH-HSS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHH-hCC
Confidence            4788999987 9999999999999999 588888888776654 44542   1223333322 2333344444332 368


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|+++++.|.
T Consensus        83 iDiLVnnAg~   92 (251)
T d1zk4a1          83 VSTLVNNAGI   92 (251)
T ss_dssp             CCEEEECCCC
T ss_pred             ceEEEecccc
Confidence            9999998875

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=96.92  E-value=0.0024  Score=54.28  Aligned_cols=81  Identities=22%  Similarity=0.268  Sum_probs=55.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH-HHHhCCCeE-EecCCC-cccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKEIGADNI-VKVSTN-LQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~~~v-~~~~~~-~~~~~~~~~~~~~~~~~~~d  264 (372)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+. .++++.... +..|-. .++..+.+.+..+. -+.+|
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~g~id   81 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVAR-FGKID   81 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHH-hCCcc
Confidence            4889999987 9999999999999999 68888898887654 456664322 222322 23333444443332 36899


Q ss_pred             EEEeCCC
Q 017426          265 VSFDCAG  271 (372)
Q Consensus       265 ~vid~~g  271 (372)
                      +++++.|
T Consensus        82 ilvnnAG   88 (276)
T d1bdba_          82 TLIPNAG   88 (276)
T ss_dssp             EEECCCC
T ss_pred             ccccccc
Confidence            9999876

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.90  E-value=0.008  Score=49.81  Aligned_cols=105  Identities=20%  Similarity=0.229  Sum_probs=68.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCCCeE-EecCCC-cccHHHHHHHHHHHcCCcce
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGADNI-VKVSTN-LQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~~~v-~~~~~~-~~~~~~~~~~~~~~~~~~~d  264 (372)
                      .|.++||+|+ +++|.++++-+...|+ +|+.+.+++++.+ ..++++.... +..|-. .++..+.+.+..+. -+++|
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~-~g~iD   81 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEE-FGRLH   81 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHH-hCCcc
Confidence            5789999987 9999999999999999 6788888887765 4466775432 222322 23333444444332 36899


Q ss_pred             EEEeCCCcH----------H---------------HHHHHHHHhccCCEEEEEcCC
Q 017426          265 VSFDCAGLN----------K---------------TMSTALGATCAGGKVCLVGMG  295 (372)
Q Consensus       265 ~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~  295 (372)
                      ++|++.+..          +               ..+..+..+..++.++..+..
T Consensus        82 iLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~  137 (241)
T d2a4ka1          82 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSV  137 (241)
T ss_dssp             EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCC
T ss_pred             Eeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccc
Confidence            999977643          0               123355666777777766543

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=96.89  E-value=0.0036  Score=52.64  Aligned_cols=82  Identities=27%  Similarity=0.370  Sum_probs=55.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH----HhCCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~----~lg~~~-v~~~~~~-~~~~~~~~~~~~~~~~~  261 (372)
                      .|+++||+|+ +++|.++++.+...|+ .|+.+++++++.+.+.    +.|... .+..|-. .++..+.+.+..+. -+
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g   81 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD-FG   81 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence            5789999987 9999999999999999 5888889887765432    334332 2223322 23344444444332 36


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|+++++.|.
T Consensus        82 ~iDilVnnaG~   92 (260)
T d1zema1          82 KIDFLFNNAGY   92 (260)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCeehhhhcc
Confidence            89999998764

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.89  E-value=0.0023  Score=53.70  Aligned_cols=82  Identities=17%  Similarity=0.245  Sum_probs=55.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH----HHHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV----AKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  261 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~----~~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~  261 (372)
                      .|+++||+|+ +++|.++++.+...|+ .|+.+++++++.+.    +++.|... .+..|-.+ ++..+.+.+..+. -+
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~-~g   87 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK-LG   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            5789999987 9999999999999999 57888888876553    33445432 23333322 2333334443332 35


Q ss_pred             cceEEEeCCCc
Q 017426          262 GIDVSFDCAGL  272 (372)
Q Consensus       262 ~~d~vid~~g~  272 (372)
                      ++|+++++.|.
T Consensus        88 ~iDilvnnAG~   98 (255)
T d1fmca_          88 KVDILVNNAGG   98 (255)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEeeeCCcC
Confidence            89999998775

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.86  E-value=0.0032  Score=52.76  Aligned_cols=83  Identities=19%  Similarity=0.223  Sum_probs=55.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhC----CCe--EEecCCC-cccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIG----ADN--IVKVSTN-LQDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg----~~~--v~~~~~~-~~~~~~~~~~~~~~~  259 (372)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ +++.    ...  .+..|-. .++..+.+.+..+. 
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-   79 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH-   79 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHH-
Confidence            4789999987 9999999999999999 588888888775543 3332    111  1222322 23344444444332 


Q ss_pred             CCcceEEEeCCCcH
Q 017426          260 GTGIDVSFDCAGLN  273 (372)
Q Consensus       260 ~~~~d~vid~~g~~  273 (372)
                      -+++|+++++.|..
T Consensus        80 ~G~iDilVnnAg~~   93 (254)
T d2gdza1          80 FGRLDILVNNAGVN   93 (254)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             cCCcCeeccccccc
Confidence            35899999988763

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.86  E-value=0.0041  Score=52.10  Aligned_cols=82  Identities=13%  Similarity=0.270  Sum_probs=53.5

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCeEEEEecChhHHHHHH----HhCCCeEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-G--PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g--~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~----~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .|+++||+|+ |  ++|.++++.+...|+ +|+.++++++..+.++    ..+....+..+-.+ ++..+.+.+..+. .
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~   84 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEA-F   84 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHh-c
Confidence            4789999997 5  699999999999999 5777777776544333    33444444444333 3333334443332 3


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|+++++.|.
T Consensus        85 g~iDilVnnag~   96 (256)
T d1ulua_          85 GGLDYLVHAIAF   96 (256)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCceEEEecccc
Confidence            689999998764

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.84  E-value=0.0041  Score=52.24  Aligned_cols=107  Identities=21%  Similarity=0.244  Sum_probs=72.7

Q ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHHH----h-C--CCeEEecCCCcccHH
Q 017426          178 GVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKE----I-G--ADNIVKVSTNLQDIA  249 (372)
Q Consensus       178 a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~~----l-g--~~~v~~~~~~~~~~~  249 (372)
                      +...+...+++||++||=.|+|. |.++..||+..|- ..|++++.+++..+.+++    + +  .+.+....   .|..
T Consensus        85 ~s~Ii~~l~i~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~---~d~~  160 (264)
T d1i9ga_          85 AAQIVHEGDIFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVV---SDLA  160 (264)
T ss_dssp             HHHHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEEC---SCGG
T ss_pred             HHHHHHHhCCCCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEe---cccc
Confidence            44456779999999999998753 7888889988763 279999999998887754    2 1  23322211   1111


Q ss_pred             HHHHHHHHHcCCcceEEEeCCCc-HHHHHHHHHHhccCCEEEEEc
Q 017426          250 EEVEKIQKAMGTGIDVSFDCAGL-NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       250 ~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      +    . ......+|.||-.... ...+..+.+.|+|+|+++.+.
T Consensus       161 ~----~-~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~  200 (264)
T d1i9ga_         161 D----S-ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  200 (264)
T ss_dssp             G----C-CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             c----c-cccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEEe
Confidence            1    0 0124679987644443 357788999999999998874

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.83  E-value=0.0047  Score=52.75  Aligned_cols=101  Identities=15%  Similarity=0.201  Sum_probs=69.2

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH----HhCCCeEEecCCCcccHHHHHHHHHH
Q 017426          182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       182 l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      ++.+++++|++||=+|+|- |..+..+|+..|+ .|++++.+++..+.++    ..|....+....  .++.        
T Consensus        54 ~~~l~l~~G~~VLDiGCG~-G~~~~~~a~~~g~-~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~--~d~~--------  121 (291)
T d1kpia_          54 LDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI--QGWE--------  121 (291)
T ss_dssp             HHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHSCCSSCEEEEE--CCGG--------
T ss_pred             HHhcCCCCCCEEEEecCcc-hHHHHHHHHhcCc-ceeeccchHHHHHHHHHHHHhhccchhhhhhh--hccc--------
Confidence            3678999999999999863 5567888888998 6889999998766543    445433222111  1110        


Q ss_pred             HcCCcceEEEe-----CCCc----------HHHHHHHHHHhccCCEEEEEcC
Q 017426          258 AMGTGIDVSFD-----CAGL----------NKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       258 ~~~~~~d~vid-----~~g~----------~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      ...+.||.|+.     .++.          +..+..+.+.|+|+|+++.-..
T Consensus       122 ~~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~i  173 (291)
T d1kpia_         122 EFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI  173 (291)
T ss_dssp             GCCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEEE
T ss_pred             ccccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEEE
Confidence            12468998864     4442          3467789999999999987543

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.82  E-value=0.0043  Score=48.47  Aligned_cols=80  Identities=18%  Similarity=0.269  Sum_probs=54.0

Q ss_pred             HHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-HhCCC-eEEecCCCcccHHHHHHHHH
Q 017426          180 HACRRAN-IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGAD-NIVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       180 ~~l~~~~-~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~lg~~-~v~~~~~~~~~~~~~~~~~~  256 (372)
                      .+++..+ ..+|.+|||+|+|+.+.+++.-+..+|. .+.++.++.++.+.+. .+... .+...+.  .+       . 
T Consensus         7 ~~l~~~~~~~~~k~vlIlGaGGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~--~~-------~-   75 (170)
T d1nyta1           7 SDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSM--DE-------L-   75 (170)
T ss_dssp             HHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCS--GG-------G-
T ss_pred             HHHHHcCCCCCCCEEEEECCcHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhccccccccc--cc-------c-
Confidence            3455433 3578999999999999999999999998 5888889888876554 34321 1111111  01       0 


Q ss_pred             HHcCCcceEEEeCCCc
Q 017426          257 KAMGTGIDVSFDCAGL  272 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~  272 (372)
                        ....+|++|+|+..
T Consensus        76 --~~~~~dliIN~Tp~   89 (170)
T d1nyta1          76 --EGHEFDLIINATSS   89 (170)
T ss_dssp             --TTCCCSEEEECCSC
T ss_pred             --cccccceeeccccc
Confidence              13579999999864

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.80  E-value=0.0031  Score=52.21  Aligned_cols=100  Identities=26%  Similarity=0.309  Sum_probs=60.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHH-HHHH-HcCCcceE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE-KIQK-AMGTGIDV  265 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~-~~~~-~~~~~~d~  265 (372)
                      .|++|||+|+ +++|.+.++.+...|+ .|+.++.+++...     ........+....+..+.+. +..+ ....++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccc-----cccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            4789999998 9999999999999999 5777766554321     11111111111122222222 2211 12457999


Q ss_pred             EEeCCCcH-----------H---------------HHHHHHHHhccCCEEEEEcC
Q 017426          266 SFDCAGLN-----------K---------------TMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       266 vid~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~  294 (372)
                      +|++.|..           +               ..+.++..|+++|+++.++.
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS  129 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGA  129 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEcc
Confidence            99988741           1               22336667788899998864

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.77  E-value=0.0028  Score=53.76  Aligned_cols=82  Identities=23%  Similarity=0.256  Sum_probs=54.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-H---hCCC--e--EEecCCCc-ccHHHHHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-E---IGAD--N--IVKVSTNL-QDIAEEVEKIQKA  258 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~---lg~~--~--v~~~~~~~-~~~~~~~~~~~~~  258 (372)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+. +   .+..  .  .+..|-.+ ++..+.+.+..+.
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4788999987 9999999999999999 6888889888765443 2   3321  1  22233222 3333444444332


Q ss_pred             cCCcceEEEeCCCc
Q 017426          259 MGTGIDVSFDCAGL  272 (372)
Q Consensus       259 ~~~~~d~vid~~g~  272 (372)
                       .+++|+++++.|.
T Consensus        83 -~g~iDilvnnAG~   95 (272)
T d1xkqa_          83 -FGKIDVLVNNAGA   95 (272)
T ss_dssp             -HSCCCEEEECCCC
T ss_pred             -hCCceEEEeCCcc
Confidence             3689999998764

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.75  E-value=0.0042  Score=52.64  Aligned_cols=82  Identities=20%  Similarity=0.235  Sum_probs=54.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH----HHhCCC--e--EEecCCCc-ccHHHHHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGAD--N--IVKVSTNL-QDIAEEVEKIQKA  258 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~----~~lg~~--~--v~~~~~~~-~~~~~~~~~~~~~  258 (372)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+    ++.+..  .  .+..|-.+ .+..+.+.+..+.
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            4789999987 9999999999999999 688888988776543    233322  1  22233222 3333444444332


Q ss_pred             cCCcceEEEeCCCc
Q 017426          259 MGTGIDVSFDCAGL  272 (372)
Q Consensus       259 ~~~~~d~vid~~g~  272 (372)
                       .+.+|+++++.|.
T Consensus        82 -~G~iDilVnnAG~   94 (274)
T d1xhla_          82 -FGKIDILVNNAGA   94 (274)
T ss_dssp             -HSCCCEEEECCCC
T ss_pred             -cCCceEEEeeccc
Confidence             3589999998763

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.74  E-value=0.0042  Score=52.14  Aligned_cols=82  Identities=26%  Similarity=0.314  Sum_probs=54.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-H---hC--CCe-EEecCC-CcccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-E---IG--ADN-IVKVST-NLQDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~---lg--~~~-v~~~~~-~~~~~~~~~~~~~~~~  259 (372)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+. +   .+  ... .+..|- +.++..+.+.+..+. 
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~-   80 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER-   80 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH-
Confidence            4788999987 9999999999999999 6888888887765432 2   22  221 122232 223444444444332 


Q ss_pred             CCcceEEEeCCCc
Q 017426          260 GTGIDVSFDCAGL  272 (372)
Q Consensus       260 ~~~~d~vid~~g~  272 (372)
                      -+++|+++++.|.
T Consensus        81 ~G~iDiLVnnAG~   93 (258)
T d1iy8a_          81 FGRIDGFFNNAGI   93 (258)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             hCCCCEEEECCcc
Confidence            3689999998763

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.73  E-value=0.0057  Score=50.92  Aligned_cols=82  Identities=20%  Similarity=0.225  Sum_probs=54.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChh--HHHHHHHhCCCeE-EecCCCc-ccHHHHHHHHHHHcCCcc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY--RLSVAKEIGADNI-VKVSTNL-QDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~--~~~~~~~lg~~~v-~~~~~~~-~~~~~~~~~~~~~~~~~~  263 (372)
                      .|+.+||+|+ +++|.++++.+...|+ +|++++++++  ..+.++++|.... +..|-.+ .+..+.+.+..+. -+++
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~-~G~i   81 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVIST-FGRC   81 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHH-cCCC
Confidence            4788999987 9999999999999999 5777776653  3345567775432 2223222 3333444444332 3689


Q ss_pred             eEEEeCCCc
Q 017426          264 DVSFDCAGL  272 (372)
Q Consensus       264 d~vid~~g~  272 (372)
                      |+++++.|.
T Consensus        82 DilVnnAG~   90 (247)
T d2ew8a1          82 DILVNNAGI   90 (247)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998875

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.69  E-value=0.0058  Score=52.41  Aligned_cols=82  Identities=17%  Similarity=0.198  Sum_probs=54.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHh--------CCCe-EEecCCC-cccHHHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEI--------GADN-IVKVSTN-LQDIAEEVEKIQ  256 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~l--------g~~~-v~~~~~~-~~~~~~~~~~~~  256 (372)
                      .|.++||+|+ +++|.++++.+...|+ .|+++++++++.+.+ +++        +... .+..|-. .++..+.+.+..
T Consensus        11 ~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   89 (297)
T d1yxma1          11 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   89 (297)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence            5789999987 9999999999999999 588888888775533 332        2221 1222322 233444444443


Q ss_pred             HHcCCcceEEEeCCCc
Q 017426          257 KAMGTGIDVSFDCAGL  272 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~  272 (372)
                      +. .+++|+++++.|.
T Consensus        90 ~~-~G~iDiLVnnAg~  104 (297)
T d1yxma1          90 DT-FGKINFLVNNGGG  104 (297)
T ss_dssp             HH-HSCCCEEEECCCC
T ss_pred             HH-hCCeEEEEeeccc
Confidence            32 3589999998775

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.66  E-value=0.0077  Score=51.21  Aligned_cols=101  Identities=17%  Similarity=0.186  Sum_probs=68.8

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh----CCCeEEecCCCcccHHHHHHHHHH
Q 017426          182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       182 l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      ++++++++|++||=+|+|- |..++.+++..|+ .|++++.|++..+.+++.    |....+....  .|+    +.   
T Consensus        55 ~~~l~l~~G~~VLDiGCG~-G~~a~~~a~~~g~-~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~--~d~----~~---  123 (285)
T d1kpga_          55 LGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLL--AGW----EQ---  123 (285)
T ss_dssp             HTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE--SCG----GG---
T ss_pred             HHHcCCCCCCEEEEecCcc-hHHHHHHHhcCCc-ceEEEeccHHHHHHHHHHHHhhhhhhhhHHHH--hhh----hc---
Confidence            3568899999999999863 7788889999998 689999999887776542    3211111111  121    11   


Q ss_pred             HcCCcceEEEe-----CCCc---HHHHHHHHHHhccCCEEEEEcC
Q 017426          258 AMGTGIDVSFD-----CAGL---NKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       258 ~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                       ..+.+|.|+.     .++.   ...+..+.+.|+|+|+++...+
T Consensus       124 -~~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~~i  167 (285)
T d1kpga_         124 -FDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI  167 (285)
T ss_dssp             -CCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             -ccccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEEEE
Confidence             1467888754     4443   2467778899999999987543

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.66  E-value=0.0085  Score=50.14  Aligned_cols=81  Identities=21%  Similarity=0.237  Sum_probs=53.7

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH----HHhCCCeE-EecCCCc-ccHHHHHHHHHHHcCCc
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADNI-VKVSTNL-QDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~----~~lg~~~v-~~~~~~~-~~~~~~~~~~~~~~~~~  262 (372)
                      |+.+||+|+ +++|.++++.+...|+ +|+.+++++++.+.+    ++.|.... +..|-.+ ++..+.+.+..+ .-++
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~-~~g~   79 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVE-RYGP   79 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH-HTCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH-HhCC
Confidence            456689987 9999999999999999 578888888765533    34454322 2223222 334444444433 2468


Q ss_pred             ceEEEeCCCc
Q 017426          263 IDVSFDCAGL  272 (372)
Q Consensus       263 ~d~vid~~g~  272 (372)
                      +|+++++.|.
T Consensus        80 iDilVnnAG~   89 (257)
T d2rhca1          80 VDVLVNNAGR   89 (257)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEecccc
Confidence            9999998875

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.64  E-value=0.0078  Score=47.67  Aligned_cols=100  Identities=11%  Similarity=0.016  Sum_probs=65.8

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC-CCe-----------------EEecCC
Q 017426          182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG-ADN-----------------IVKVST  243 (372)
Q Consensus       182 l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg-~~~-----------------v~~~~~  243 (372)
                      +....++||.+||..|||. |..++.||+. |+ .|++++.|++-.+.+++.- ...                 ++.-+.
T Consensus        13 ~~~l~~~~~~rvLd~GCG~-G~~a~~la~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   89 (201)
T d1pjza_          13 WSSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   89 (201)
T ss_dssp             HHHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HHHcCCCCCCEEEEecCcC-CHHHHHHHHc-CC-ceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccc
Confidence            3446789999999999864 7888888864 88 6999999999998887632 111                 110000


Q ss_pred             CcccHHHHHHHHHHHcCCcceEEEeCCCc--------HHHHHHHHHHhccCCEEEEEc
Q 017426          244 NLQDIAEEVEKIQKAMGTGIDVSFDCAGL--------NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g  293 (372)
                        .++..   .    ....+|+|++...-        ...+..+.+.|+++|.++...
T Consensus        90 --~~l~~---~----~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          90 --FALTA---R----DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             --SSSTH---H----HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             --ccccc---c----cccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence              11100   0    12478999874331        235667888999999976653

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.62  E-value=0.0056  Score=50.54  Aligned_cols=74  Identities=22%  Similarity=0.202  Sum_probs=50.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      +|+++||+|+ +++|.++++.+...|+ .|+.+++++++   +++.+...+ ..|- ..+......+     -+.+|+++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~---l~~~~~~~~-~~Dv-~~~~~~~~~~-----~g~iD~lV   71 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEEL---LKRSGHRYV-VCDL-RKDLDLLFEK-----VKEVDILV   71 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHH---HHHTCSEEE-ECCT-TTCHHHHHHH-----SCCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHH---HHhcCCcEE-Ecch-HHHHHHHHHH-----hCCCcEEE
Confidence            4789999987 9999999999999999 58888887654   445554332 2222 2222222222     36899999


Q ss_pred             eCCCcH
Q 017426          268 DCAGLN  273 (372)
Q Consensus       268 d~~g~~  273 (372)
                      ++.|..
T Consensus        72 nnAG~~   77 (234)
T d1o5ia_          72 LNAGGP   77 (234)
T ss_dssp             ECCCCC
T ss_pred             eccccc
Confidence            988753

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.62  E-value=0.0026  Score=53.30  Aligned_cols=77  Identities=16%  Similarity=0.078  Sum_probs=51.1

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCe-EEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      ++||+|+ +++|.++++.+...|+ +|+.++++.++.+.+++.+... ..+. ...++..+.+.+..+. -+++|+++++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~dv-~~~~~~~~~~~~~~~~-~G~iDiLVnN   78 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKP-MSEQEPAELIEAVTSA-YGQVDVLVSN   78 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEE-CCCCSHHHHHHHHHHH-HSCCCEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhhhCcEEEecc-CCHHHHHHHHHHHHHH-cCCCCEEEEC
Confidence            6899987 9999999999999999 6888888877776665543111 0111 1224444444444432 3689999986


Q ss_pred             CC
Q 017426          270 AG  271 (372)
Q Consensus       270 ~g  271 (372)
                      .|
T Consensus        79 Ag   80 (252)
T d1zmta1          79 DI   80 (252)
T ss_dssp             CC
T ss_pred             Cc
Confidence            55

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.62  E-value=0.01  Score=46.20  Aligned_cols=96  Identities=9%  Similarity=0.034  Sum_probs=62.1

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH-hCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      +.+|||.|+|.+|..+++.+...|. .|++++++.++.+.+.+ ++..... ....  +.........    ...|.++.
T Consensus         2 ~K~IliiGaG~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~~~~~~-~~~~--~~~~~~~~~i----~~~~~~i~   73 (182)
T d1e5qa1           2 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPI-SLDV--NDDAALDAEV----AKHDLVIS   73 (182)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCTTEEEE-ECCT--TCHHHHHHHH----TTSSEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhcccccccc-cccc--cchhhhHhhh----hccceeEe
Confidence            5799999999999999999999999 58999999998887655 4433222 2221  1122222222    46778887


Q ss_pred             CCCcHHHHHHHHHHhccCCEEEEEc
Q 017426          269 CAGLNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      +............++..+-.++...
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~   98 (182)
T d1e5qa1          74 LIPYTFHATVIKSAIRQKKHVVTTS   98 (182)
T ss_dssp             CSCGGGHHHHHHHHHHHTCEEECSS
T ss_pred             eccchhhhHHHHHHHhhccceeecc
Confidence            7776544444445555555555543

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.62  E-value=0.0025  Score=53.31  Aligned_cols=83  Identities=18%  Similarity=0.229  Sum_probs=54.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEecChhHHHHHHHhCCCe--EEecCCCc-ccHHHHHHHHHHH-cCCcc
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKEIGADN--IVKVSTNL-QDIAEEVEKIQKA-MGTGI  263 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~-~vv~v~~~~~~~~~~~~lg~~~--v~~~~~~~-~~~~~~~~~~~~~-~~~~~  263 (372)
                      ..+|||+|+ +++|.++++.+...|+. .|+.+.++.++.+.+++.....  ++..|-.+ ++..+.+.++.+. +..++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            368999998 99999999888888864 5777788888877776654222  23333322 2333333333322 23469


Q ss_pred             eEEEeCCCc
Q 017426          264 DVSFDCAGL  272 (372)
Q Consensus       264 d~vid~~g~  272 (372)
                      |+++++.|.
T Consensus        83 dilinnAG~   91 (250)
T d1yo6a1          83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             EEEEEcCcc
Confidence            999998874

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.61  E-value=0.0058  Score=51.32  Aligned_cols=82  Identities=20%  Similarity=0.256  Sum_probs=54.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-----HHHHhCCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-----VAKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-----~~~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+     +.++.|... .+..|-.+ ++..+.+.+..+ ..
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~-~~   85 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA-DL   85 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH-Hh
Confidence            4788999987 9999999999999999 5777777765433     234456433 22333322 333444444433 24


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|+++++.|.
T Consensus        86 g~iDilVnnAg~   97 (260)
T d1h5qa_          86 GPISGLIANAGV   97 (260)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCcEecccccc
Confidence            689999998764

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.61  E-value=0.0098  Score=46.66  Aligned_cols=84  Identities=17%  Similarity=0.116  Sum_probs=57.3

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEE--------ecCCCcccHHHHHHHHHHHcCCc
Q 017426          191 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV--------KVSTNLQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~--------~~~~~~~~~~~~~~~~~~~~~~~  262 (372)
                      .+|.|+|+|.+|++.+..+...|. .|.+.++++++.+.+++.+.....        .......+..+.+        ..
T Consensus         2 k~iaIiGaG~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~--------~~   72 (184)
T d1bg6a2           2 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV--------KD   72 (184)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH--------TT
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHh--------cC
Confidence            589999999999999999999998 688899999999988876632211        0000112222222        57


Q ss_pred             ceEEEeCCCcHHHHHHHHHHhc
Q 017426          263 IDVSFDCAGLNKTMSTALGATC  284 (372)
Q Consensus       263 ~d~vid~~g~~~~~~~~~~~l~  284 (372)
                      +|++|-++... ..+..++.++
T Consensus        73 aD~iii~v~~~-~~~~~~~~i~   93 (184)
T d1bg6a2          73 ADVILIVVPAI-HHASIAANIA   93 (184)
T ss_dssp             CSEEEECSCGG-GHHHHHHHHG
T ss_pred             CCEEEEEEchh-HHHHHHHHhh
Confidence            99999998875 3344444333

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.60  E-value=0.0064  Score=51.62  Aligned_cols=100  Identities=14%  Similarity=0.223  Sum_probs=67.4

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHH
Q 017426          182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       182 l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      ++..+++||++||=+|+|. |.++..+++..|. .|++++.+++..+.+++    .|....+....  .++.    +   
T Consensus        45 ~~~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~-~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~--~d~~----~---  113 (280)
T d2fk8a1          45 LDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLL--QGWE----D---  113 (280)
T ss_dssp             HTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE--SCGG----G---
T ss_pred             HHHcCCCCCCEEEEecCCc-hHHHHHHHHhCce-eEEEecchHHHHHHHHHHHHhhccccchhhhh--hhhh----h---
Confidence            3567899999999999864 4456778888898 69999999988777655    34322111111  1111    1   


Q ss_pred             HcCCcceEEEe-----CCCcH---HHHHHHHHHhccCCEEEEEc
Q 017426          258 AMGTGIDVSFD-----CAGLN---KTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       258 ~~~~~~d~vid-----~~g~~---~~~~~~~~~l~~~G~~v~~g  293 (372)
                       ..+.+|.|+.     .++..   ..+..+.+.|+|+|++++-.
T Consensus       114 -~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~~  156 (280)
T d2fk8a1         114 -FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS  156 (280)
T ss_dssp             -CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             -hccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEEE
Confidence             1467898853     44432   45778899999999998753

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.59  E-value=0.0045  Score=52.12  Aligned_cols=82  Identities=22%  Similarity=0.237  Sum_probs=53.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-H---HhCCC----eEEecCCCc-ccHHHHHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---EIGAD----NIVKVSTNL-QDIAEEVEKIQKA  258 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~---~lg~~----~v~~~~~~~-~~~~~~~~~~~~~  258 (372)
                      .|+.+||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ +   +.+..    ..+..|-.+ .+..+.+.+..+.
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4778899987 9999999999999999 588888988776543 2   23321    122223222 3333344443332


Q ss_pred             cCCcceEEEeCCCc
Q 017426          259 MGTGIDVSFDCAGL  272 (372)
Q Consensus       259 ~~~~~d~vid~~g~  272 (372)
                       .+++|+++++.|.
T Consensus        83 -~g~iDilvnnAG~   95 (264)
T d1spxa_          83 -FGKLDILVNNAGA   95 (264)
T ss_dssp             -HSCCCEEEECCC-
T ss_pred             -hCCCCEeeccccc
Confidence             3689999998874

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.58  E-value=0.019  Score=42.48  Aligned_cols=74  Identities=20%  Similarity=0.265  Sum_probs=53.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH-hCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCC
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  270 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  270 (372)
                      +|+|.|+|.+|+.+++.+...|. .|++++.++++.+.+.+ ++.. ++.-+..+.   +.+++.   +-..+|.++-++
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~~~~-vi~Gd~~~~---~~l~~~---~i~~a~~vv~~t   73 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDAL-VINGDCTKI---KTLEDA---GIEDADMYIAVT   73 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSE-EEESCTTSH---HHHHHT---TTTTCSEEEECC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhhhhh-hccCcccch---hhhhhc---ChhhhhhhcccC
Confidence            68999999999999999999998 68999999999887754 5644 332222222   223322   346799999988


Q ss_pred             CcH
Q 017426          271 GLN  273 (372)
Q Consensus       271 g~~  273 (372)
                      +..
T Consensus        74 ~~d   76 (132)
T d1lssa_          74 GKE   76 (132)
T ss_dssp             SCH
T ss_pred             CcH
Confidence            875

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.57  E-value=0.018  Score=49.38  Aligned_cols=103  Identities=22%  Similarity=0.264  Sum_probs=64.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecC---------hhHHH-HHHH---hCCCeEEecCCCcccHHHHHHH
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD---------DYRLS-VAKE---IGADNIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~---------~~~~~-~~~~---lg~~~v~~~~~~~~~~~~~~~~  254 (372)
                      .|+++||+|+ +++|.+.++.+...|+ .|++++++         ++..+ ..++   .+.....+..+ ..+..+.+.+
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~v~~   83 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS-VEAGEKLVKT   83 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC-GGGHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccch-HHHHHHHHHH
Confidence            4788999987 9999999999999999 57776443         22222 2233   33333334322 2344444544


Q ss_pred             HHHHcCCcceEEEeCCCcH----------H---------------HHHHHHHHhc--cCCEEEEEcC
Q 017426          255 IQKAMGTGIDVSFDCAGLN----------K---------------TMSTALGATC--AGGKVCLVGM  294 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~~----------~---------------~~~~~~~~l~--~~G~~v~~g~  294 (372)
                      ..+ ..+++|++|++.|..          +               ..+.++..|+  .+|+++.++.
T Consensus        84 ~~~-~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS  149 (302)
T d1gz6a_          84 ALD-TFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTAS  149 (302)
T ss_dssp             HHH-HTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             HHH-HcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCC
Confidence            443 246899999988753          1               2334566663  4589888863

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.56  E-value=0.0015  Score=52.94  Aligned_cols=95  Identities=24%  Similarity=0.269  Sum_probs=60.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .++|+|+|| |.+|..++..+...|. .|.++.+++++.......++. ++..+-  .+. +.+.+..    .+.|+||.
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~-~~~gD~--~d~-~~l~~al----~~~d~vi~   73 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAH-VVVGDV--LQA-ADVDKTV----AGQDAVIV   73 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSE-EEESCT--TSH-HHHHHHH----TTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhcccccccccc-cccccc--cch-hhHHHHh----cCCCEEEE
Confidence            468999998 9999999998888998 577787888875543333443 233332  222 2333332    47899999


Q ss_pred             CCCcH----------HHHHHHHHHhccC--CEEEEEc
Q 017426          269 CAGLN----------KTMSTALGATCAG--GKVCLVG  293 (372)
Q Consensus       269 ~~g~~----------~~~~~~~~~l~~~--G~~v~~g  293 (372)
                      ++|..          .....+++.++..  .+++.++
T Consensus        74 ~~g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~s  110 (205)
T d1hdoa_          74 LLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACT  110 (205)
T ss_dssp             CCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             EeccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEe
Confidence            98753          1223455555544  3777765

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.56  E-value=0.0031  Score=51.70  Aligned_cols=105  Identities=15%  Similarity=0.199  Sum_probs=64.2

Q ss_pred             HHHHHh--cCCCCCCEEEEECCC--HHHHHHHHHHHHcCC---CeEEEEecChhHHHHHHH---------hCCCeEEecC
Q 017426          179 VHACRR--ANIGPETNVLIMGAG--PIGLVTMLAARAFGA---PRIVIVDVDDYRLSVAKE---------IGADNIVKVS  242 (372)
Q Consensus       179 ~~~l~~--~~~~~g~~vlI~Gag--~~G~~ai~l~~~~g~---~~vv~v~~~~~~~~~~~~---------lg~~~v~~~~  242 (372)
                      ..+++.  ..+++|++||..|+|  -....+.+++...|.   .+|++++.+++-.+.+++         ++...+....
T Consensus        68 a~~l~~L~~~l~~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~  147 (223)
T d1r18a_          68 AFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE  147 (223)
T ss_dssp             HHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             HHHHHHHhhccCCCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEe
Confidence            345654  378999999999863  233334444444453   268999998876665533         2222222211


Q ss_pred             CC-cccHHHHHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEE
Q 017426          243 TN-LQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       243 ~~-~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  292 (372)
                      .+ ...+       .  ..++||.|+-+.+.+..-+..++.|+++|+++..
T Consensus       148 ~d~~~~~-------~--~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         148 GDGRKGY-------P--PNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  189 (223)
T ss_dssp             SCGGGCC-------G--GGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ccccccc-------c--cccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence            11 1111       0  1468999988766654556788899999999874

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.55  E-value=0.011  Score=48.97  Aligned_cols=102  Identities=17%  Similarity=0.159  Sum_probs=61.8

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHH----HHHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCCcce
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV----AKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~----~~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~~d  264 (372)
                      -+||+|+ +++|.+.++.+...|+++++...+++++.+.    +++.|... .+..|-.+ ++..+.+.+..+ ..+++|
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~-~~g~iD   81 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAID-AWGTID   81 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHH-HSSCCS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHH-HcCCCC
Confidence            4677887 9999999999999999533334556555443    33455332 22233322 233344444433 246899


Q ss_pred             EEEeCCCcH----------H---------------HHHHHHHHh--ccCCEEEEEcC
Q 017426          265 VSFDCAGLN----------K---------------TMSTALGAT--CAGGKVCLVGM  294 (372)
Q Consensus       265 ~vid~~g~~----------~---------------~~~~~~~~l--~~~G~~v~~g~  294 (372)
                      +++++.|..          +               ..+.+++.|  ..+|+++.++.
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS  138 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIAS  138 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcC
Confidence            999988753          1               233456666  35689988864

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.53  E-value=0.0046  Score=51.06  Aligned_cols=99  Identities=20%  Similarity=0.292  Sum_probs=59.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHH-HHHHHH-HcCCcceEE
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE-VEKIQK-AMGTGIDVS  266 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~-~~~~~~-~~~~~~d~v  266 (372)
                      +.+|||+|+ +++|.+.++.+...|+ .|+.+++++++..     .....+..+....+.... ...... ...+++|++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhcc-----cccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence            357999998 9999999999999999 5788877665321     111111111111111111 111111 135679999


Q ss_pred             EeCCCcH-----------H---------------HHHHHHHHhccCCEEEEEcC
Q 017426          267 FDCAGLN-----------K---------------TMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       267 id~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~  294 (372)
                      |++.|..           +               ..+..+..|+++|+++.++.
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS  129 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGA  129 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEecc
Confidence            9988741           1               12346667788899988864

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.53  E-value=0.0048  Score=48.79  Aligned_cols=126  Identities=13%  Similarity=0.102  Sum_probs=70.7

Q ss_pred             HHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHH----HHHhC--C-CeEEecCCCcccHHHH
Q 017426          180 HACRRANI-GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV----AKEIG--A-DNIVKVSTNLQDIAEE  251 (372)
Q Consensus       180 ~~l~~~~~-~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~----~~~lg--~-~~v~~~~~~~~~~~~~  251 (372)
                      ++++..++ -.+.+|||.|+|+.+.+++..+...|++.++++.+++++.+.    ++.++  . ..+...+.  .+... 
T Consensus         7 ~~l~~~~~~l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~-   83 (182)
T d1vi2a1           7 RAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDL--ADQQA-   83 (182)
T ss_dssp             HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEET--TCHHH-
T ss_pred             HHHHHcCCCcCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeec--ccccc-
Confidence            44554333 367899999999999999999999999989999888765443    33332  1 11111111  12221 


Q ss_pred             HHHHHHHcCCcceEEEeCCCcHH------HHHHHHHHhccCCEEEEEcCCCCCccccchhhhccCcEE
Q 017426          252 VEKIQKAMGTGIDVSFDCAGLNK------TMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDV  313 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~~~------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i  313 (372)
                      +.+..    ..+|++|+|+.-.-      .+..-...++++..++.+-..+.. +..+...-.+..+.
T Consensus        84 ~~~~~----~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y~p~~-T~ll~~a~~~g~~~  146 (182)
T d1vi2a1          84 FAEAL----ASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHM-TKLLQQAQQAGCKT  146 (182)
T ss_dssp             HHHHH----HTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCCSSSS-CHHHHHHHTTTCEE
T ss_pred             hhhhh----cccceeccccCCccccccchhhhhHHHhhhcchhhHHhhcCccc-cHHHHHHHHCcCeE
Confidence            22221    47899999976320      000112345666777766543333 33344444444443

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.52  E-value=0.0081  Score=50.20  Aligned_cols=83  Identities=22%  Similarity=0.199  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH---H-hCCCeE--EecCCC-c-ccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK---E-IGADNI--VKVSTN-L-QDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~---~-lg~~~v--~~~~~~-~-~~~~~~~~~~~~~~  259 (372)
                      .|+++||+|+ +++|.+++..+...|+++++..++.++ .+.+.   . .+-..+  +..+.. + .++.+.+.+..+. 
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-   81 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN-PTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ-   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCC-HHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCccc-HHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH-
Confidence            4789999987 999999999999999975555544433 33222   2 222222  222322 2 2344445554443 


Q ss_pred             CCcceEEEeCCCcH
Q 017426          260 GTGIDVSFDCAGLN  273 (372)
Q Consensus       260 ~~~~d~vid~~g~~  273 (372)
                      -+++|+++++.|..
T Consensus        82 ~g~iDilvnnAG~~   95 (254)
T d1sbya1          82 LKTVDILINGAGIL   95 (254)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             cCCCCEEEeCCCCC
Confidence            35899999998864

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.51  E-value=0.0053  Score=51.59  Aligned_cols=83  Identities=23%  Similarity=0.279  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChh-HHH----HHHHhCCCeE-EecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY-RLS----VAKEIGADNI-VKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~-~~~----~~~~lg~~~v-~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .|+++||+|+ +++|.++++.+...|+ +|+.++++.+ +.+    .+++.|.... +..|-.+ ++..+.+.+..+. .
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~-~   83 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE-F   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-h
Confidence            4788999987 9999999999999999 5777766543 322    3344554322 2223222 3333444444332 3


Q ss_pred             CcceEEEeCCCcH
Q 017426          261 TGIDVSFDCAGLN  273 (372)
Q Consensus       261 ~~~d~vid~~g~~  273 (372)
                      +++|+++++.|..
T Consensus        84 G~iDiLVnnAG~~   96 (261)
T d1geea_          84 GKLDVMINNAGLE   96 (261)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEeeccceec
Confidence            5899999988753

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.51  E-value=0.0037  Score=54.24  Aligned_cols=109  Identities=19%  Similarity=0.218  Sum_probs=68.9

Q ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEecChhHHHHHHH----hC-----------CCeEEec
Q 017426          178 GVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKE----IG-----------ADNIVKV  241 (372)
Q Consensus       178 a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~-~vv~v~~~~~~~~~~~~----lg-----------~~~v~~~  241 (372)
                      +.+.+...+++||++||=.|+|. |.+++.||+..|.+ .|++++.+++..+.+++    ++           .+.+...
T Consensus        87 ~~~Il~~l~i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~  165 (324)
T d2b25a1          87 INMILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFI  165 (324)
T ss_dssp             HHHHHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEE
T ss_pred             HHHHHHHhCCCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEE
Confidence            44455778899999999998754 88888999987643 79999999988877654    11           1112111


Q ss_pred             CCCcccHHHHHHHHHHHcCCcceEEEeCCCc-HHHHHHHHHHhccCCEEEEEc
Q 017426          242 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGL-NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ...-.++..   .+   ....+|.||=-+.. ...+..+.+.|+|+|+++.+.
T Consensus       166 ~~di~~~~~---~~---~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~  212 (324)
T d2b25a1         166 HKDISGATE---DI---KSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV  212 (324)
T ss_dssp             ESCTTCCC-------------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred             ecchhhccc---cc---CCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence            111011111   11   13568988743333 247788999999999999874

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.46  E-value=0.013  Score=48.81  Aligned_cols=78  Identities=28%  Similarity=0.358  Sum_probs=51.5

Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH----HHhCCCe-EEecCCCc-ccHHHHHHHHHHHcCCcceE
Q 017426          193 VLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       193 vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~~~~~~d~  265 (372)
                      +||+|+ +++|.++++.+...|+ .|+.+++++++.+.+    ++.|... .+..|-.+ ++..+.+.+..+ .-+++|+
T Consensus         4 alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~-~~g~iDi   81 (255)
T d1gega_           4 ALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARK-TLGGFDV   81 (255)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH-HTTCCCE
T ss_pred             EEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH-HhCCccE
Confidence            588887 9999999999999999 688888988776543    3345332 22233322 233334444333 2468999


Q ss_pred             EEeCCCc
Q 017426          266 SFDCAGL  272 (372)
Q Consensus       266 vid~~g~  272 (372)
                      ++++.|.
T Consensus        82 lVnnAG~   88 (255)
T d1gega_          82 IVNNAGV   88 (255)
T ss_dssp             EEECCCC
T ss_pred             EEecccc
Confidence            9998765

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=96.33  E-value=0.03  Score=46.08  Aligned_cols=101  Identities=19%  Similarity=0.180  Sum_probs=63.1

Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCC------eEEEEecChhHHHHH-HH---hCCCe-EEecCCCc-ccHHHHHHHHHHHc
Q 017426          193 VLIMGA-GPIGLVTMLAARAFGAP------RIVIVDVDDYRLSVA-KE---IGADN-IVKVSTNL-QDIAEEVEKIQKAM  259 (372)
Q Consensus       193 vlI~Ga-g~~G~~ai~l~~~~g~~------~vv~v~~~~~~~~~~-~~---lg~~~-v~~~~~~~-~~~~~~~~~~~~~~  259 (372)
                      |||+|+ +++|.+++..+...|++      .++..++++++.+.+ ++   .|... .+..|-.+ ++..+.+.+..+ .
T Consensus         4 vlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~-~   82 (240)
T d2bd0a1           4 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE-R   82 (240)
T ss_dssp             EEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH-H
T ss_pred             EEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH-H
Confidence            678887 99999999988888985      377778888776543 22   34322 22223222 333344444433 2


Q ss_pred             CCcceEEEeCCCcH----------H---------------HHHHHHHHhc--cCCEEEEEcC
Q 017426          260 GTGIDVSFDCAGLN----------K---------------TMSTALGATC--AGGKVCLVGM  294 (372)
Q Consensus       260 ~~~~d~vid~~g~~----------~---------------~~~~~~~~l~--~~G~~v~~g~  294 (372)
                      .+.+|+++++.|..          +               ..+.+++.|+  .+|+++.++.
T Consensus        83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS  144 (240)
T d2bd0a1          83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITS  144 (240)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEec
Confidence            46899999988753          1               2334556664  4688888764

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.28  E-value=0.011  Score=48.53  Aligned_cols=93  Identities=20%  Similarity=0.294  Sum_probs=67.2

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .+++.+||=.|+| .|..+..+++ .|+ .|++++.+++..+.+++-+....+..+...-++          ..+.+|+|
T Consensus        40 ~~~~~~vLDiGcG-~G~~~~~l~~-~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~~~~l~~----------~~~~fD~i  106 (246)
T d2avna1          40 LKNPCRVLDLGGG-TGKWSLFLQE-RGF-EVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPF----------PSGAFEAV  106 (246)
T ss_dssp             CCSCCEEEEETCT-TCHHHHHHHT-TTC-EEEEEESCHHHHHHHHHHTCSCEEECCTTSCCS----------CTTCEEEE
T ss_pred             cCCCCEEEEECCC-Cchhcccccc-cce-EEEEeeccccccccccccccccccccccccccc----------ccccccce
Confidence            4678899888987 4888888876 587 699999999999999988776665433221111          24679998


Q ss_pred             EeCCCc-------HHHHHHHHHHhccCCEEEEE
Q 017426          267 FDCAGL-------NKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       267 id~~g~-------~~~~~~~~~~l~~~G~~v~~  292 (372)
                      +.....       ...+..+.++|+++|.++..
T Consensus       107 i~~~~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         107 LALGDVLSYVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             EECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eeecchhhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence            864321       23567788999999988764

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=96.28  E-value=0.014  Score=49.10  Aligned_cols=82  Identities=11%  Similarity=0.138  Sum_probs=52.0

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCeEEEEecChhHHHHH---H-HhCCCeEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-G--PIGLVTMLAARAFGAPRIVIVDVDDYRLSVA---K-EIGADNIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g--~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~---~-~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      +|.++||+|+ |  ++|.++++.+...|+ .|+.++++++..+.+   . +.+...+...+... .+..+.+.+..+ .-
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~   81 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKK-DL   81 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH-HT
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHH-Hc
Confidence            4889999986 5  699999999999999 577787776433333   2 23333333333222 333334444333 35


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +.+|+++.+.|.
T Consensus        82 g~id~lV~nag~   93 (274)
T d2pd4a1          82 GSLDFIVHSVAF   93 (274)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCCCeEEeeccc
Confidence            789999988764

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.26  E-value=0.012  Score=43.61  Aligned_cols=74  Identities=11%  Similarity=0.243  Sum_probs=54.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCC
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  271 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  271 (372)
                      +++|+|+|.+|+.+++.+...|.+ |++++.++++.+.++..+...++ -+...++.   +.+.   +-..+|.+|-+++
T Consensus         2 ~~iIiG~G~~G~~la~~L~~~g~~-vvvid~d~~~~~~~~~~~~~~~~-gd~~~~~~---l~~a---~i~~a~~vi~~~~   73 (134)
T d2hmva1           2 QFAVIGLGRFGGSIVKELHRMGHE-VLAVDINEEKVNAYASYATHAVI-ANATEENE---LLSL---GIRNFEYVIVAIG   73 (134)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCC-CEEEESCHHHHHHTTTTCSEEEE-CCTTCTTH---HHHH---TGGGCSEEEECCC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCe-EEEecCcHHHHHHHHHhCCccee-eecccchh---hhcc---CCccccEEEEEcC
Confidence            578889999999999999999995 88899999999998888865433 33333332   3222   2246888888777


Q ss_pred             cH
Q 017426          272 LN  273 (372)
Q Consensus       272 ~~  273 (372)
                      ..
T Consensus        74 ~~   75 (134)
T d2hmva1          74 AN   75 (134)
T ss_dssp             SC
T ss_pred             ch
Confidence            54

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.24  E-value=0.014  Score=47.74  Aligned_cols=101  Identities=19%  Similarity=0.207  Sum_probs=66.9

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHH
Q 017426          182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       182 l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      ++.+.++||++||=+|+|. |..+..+++. +. .+++++.++.-.+.+++    .+.+.+.....+.+++.     +  
T Consensus         9 ~~~~~~~~~~rILDiGcGt-G~~~~~la~~-~~-~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~-----~--   78 (234)
T d1xxla_           9 IKTAECRAEHRVLDIGAGA-GHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-----F--   78 (234)
T ss_dssp             HHHHTCCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-----S--
T ss_pred             HHHhCCCCCCEEEEeCCcC-cHHHHHHHHh-CC-eEEEEeCChhhhhhhhhhhccccccccccccccccccc-----c--
Confidence            3678999999999999864 7777777764 55 69999999887665543    44433222111111110     0  


Q ss_pred             HcCCcceEEEeCCC------cHHHHHHHHHHhccCCEEEEEc
Q 017426          258 AMGTGIDVSFDCAG------LNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       258 ~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                       ..+.||+|+..-.      -...+..+.+.|+|+|.++...
T Consensus        79 -~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~  119 (234)
T d1xxla_          79 -PDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD  119 (234)
T ss_dssp             -CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -cccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEE
Confidence             1367999986322      2356788999999999988754

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=96.24  E-value=0.0097  Score=49.84  Aligned_cols=83  Identities=20%  Similarity=0.247  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh-hHHHHH-----HHhCCCeE-EecCCC-cccHHHHHHHHHHHc
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD-YRLSVA-----KEIGADNI-VKVSTN-LQDIAEEVEKIQKAM  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~-~~~~~~-----~~lg~~~v-~~~~~~-~~~~~~~~~~~~~~~  259 (372)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++ ++.+.+     +..|.... +..|-. .++..+.+.+..+. 
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~-   80 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ-   80 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH-
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH-
Confidence            4788999987 9999999999999999 577777653 443322     23454332 222322 23334444443332 


Q ss_pred             CCcceEEEeCCCcH
Q 017426          260 GTGIDVSFDCAGLN  273 (372)
Q Consensus       260 ~~~~d~vid~~g~~  273 (372)
                      .+++|+++++.|..
T Consensus        81 ~G~iDiLVnnAG~~   94 (260)
T d1x1ta1          81 MGRIDILVNNAGIQ   94 (260)
T ss_dssp             HSCCSEEEECCCCC
T ss_pred             hCCCcEEEeecccc
Confidence            36899999988753

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=96.21  E-value=0.02  Score=47.24  Aligned_cols=98  Identities=20%  Similarity=0.248  Sum_probs=67.8

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCe---EEecCCCcccHHHHHHHH
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADN---IVKVSTNLQDIAEEVEKI  255 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~---v~~~~~~~~~~~~~~~~~  255 (372)
                      +..+++||++||=+|+|. |..+..+++..|+ .|++++.+++-.+.+++    .|...   ++.-+.  .+       +
T Consensus        27 ~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~-~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~--~~-------~   95 (245)
T d1nkva_          27 RVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA--AG-------Y   95 (245)
T ss_dssp             HHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC--TT-------C
T ss_pred             HHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCC-EEEEEecccchhhHHHHHHHHhhccccchhhhhHH--hh-------c
Confidence            668999999999999754 5667788888887 68999999987766554    45432   222111  11       1


Q ss_pred             HHHcCCcceEEEeC-----C-CcHHHHHHHHHHhccCCEEEEEc
Q 017426          256 QKAMGTGIDVSFDC-----A-GLNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       256 ~~~~~~~~d~vid~-----~-g~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                        ...+.||+|+..     . .-...+..+.+.|+|+|+++...
T Consensus        96 --~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~  137 (245)
T d1nkva_          96 --VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  137 (245)
T ss_dssp             --CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             --cccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence              024679999752     1 22457778889999999988753

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.20  E-value=0.027  Score=43.31  Aligned_cols=85  Identities=16%  Similarity=0.099  Sum_probs=58.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCC-eEEecCCCcccHHHHHHHHHHHcCCcceEEEeCC
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  270 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  270 (372)
                      +|.|+|+|.+|.+.+..++..|. .|++.++++++.+.+++.+.. ...+  .  .+   .        -...|+||-++
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~~~~~~~~--~--~~---~--------~~~~DiIilav   65 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQ--D--LS---L--------LQTAKIIFLCT   65 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEES--C--GG---G--------GTTCSEEEECS
T ss_pred             EEEEEeecHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhhccceeee--e--cc---c--------ccccccccccC
Confidence            58899999999999888889998 588899999999998888853 3221  1  11   1        25789999888


Q ss_pred             CcHHHHHHHHHHh----ccCCEEEEEc
Q 017426          271 GLNKTMSTALGAT----CAGGKVCLVG  293 (372)
Q Consensus       271 g~~~~~~~~~~~l----~~~G~~v~~g  293 (372)
                      ... .....++.+    .++-.++.++
T Consensus        66 p~~-~~~~vl~~l~~~l~~~~iv~~~~   91 (165)
T d2f1ka2          66 PIQ-LILPTLEKLIPHLSPTAIVTDVA   91 (165)
T ss_dssp             CHH-HHHHHHHHHGGGSCTTCEEEECC
T ss_pred             cHh-hhhhhhhhhhhhcccccceeecc
Confidence            753 444444444    4444444443

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.20  E-value=0.035  Score=42.86  Aligned_cols=92  Identities=20%  Similarity=0.128  Sum_probs=63.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCC-eEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCC
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  270 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~-~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  270 (372)
                      +|+|.|+|.+|.+.+.-++..|.. .|++.+++++..+.+++.+.......+. . .       .   .....|+||-|+
T Consensus         3 ~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~-~-~-------~---~~~~~dlIila~   70 (171)
T d2g5ca2           3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSI-A-K-------V---EDFSPDFVMLSS   70 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCG-G-G-------G---GGTCCSEEEECS
T ss_pred             EEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhh-h-h-------h---hccccccccccC
Confidence            699999999999999988988853 6888999999999999988533221111 0 0       0   124678998888


Q ss_pred             CcHH---HHHHHHHHhccCCEEEEEcCC
Q 017426          271 GLNK---TMSTALGATCAGGKVCLVGMG  295 (372)
Q Consensus       271 g~~~---~~~~~~~~l~~~G~~v~~g~~  295 (372)
                      ....   .+....+.+.++..++.++..
T Consensus        71 p~~~~~~vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          71 PVRTFREIAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             CHHHHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred             Cchhhhhhhhhhhccccccccccccccc
Confidence            7542   233445556666666666543

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.15  E-value=0.017  Score=47.05  Aligned_cols=103  Identities=19%  Similarity=0.177  Sum_probs=68.0

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHH
Q 017426          181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       181 ~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~  256 (372)
                      .++.++++++++||=+|+| .|..+..+++. |. .+++++.+++-.+.+++    .+.+.+-....+.+++.     + 
T Consensus         7 ll~~~~l~~~~rVLDiGcG-~G~~~~~l~~~-~~-~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-----~-   77 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVATG-GGHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-----F-   77 (231)
T ss_dssp             HHHHHTCCSCCEEEEETCT-TCHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-----S-
T ss_pred             HHHhcCCCCcCEEEEeccc-CcHHHHHHHHh-CC-EEEEEECCHHHHhhhhhccccccccccccccccccccc-----c-
Confidence            3567899999999999986 47777777654 65 68999999987666543    45443321111111110     0 


Q ss_pred             HHcCCcceEEEeCC-----Cc-HHHHHHHHHHhccCCEEEEEcC
Q 017426          257 KAMGTGIDVSFDCA-----GL-NKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       257 ~~~~~~~d~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                        ..+.||+|+..-     .. ...+..+.+.|+|+|+++....
T Consensus        78 --~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~  119 (231)
T d1vl5a_          78 --TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN  119 (231)
T ss_dssp             --CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             --cccccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence              135799998542     22 2467889999999999998643

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.01  E-value=0.009  Score=49.35  Aligned_cols=76  Identities=18%  Similarity=0.197  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCc-ccHHHHHHHHHHHcCCcceEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .|+++||+|+ +++|.++++.+...|+ .|+.+++++++.+.+      ..+..|-.+ ++..+.+.+..+. .+++|++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~------~~~~~Dv~~~~~v~~~~~~~~~~-~g~iDiL   77 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGL------FGVEVDVTDSDAVDRAFTAVEEH-QGPVEVL   77 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTS------EEEECCTTCHHHHHHHHHHHHHH-HSSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhcCc------eEEEEecCCHHHHHHHHHHHHHh-cCCceEE
Confidence            5789999987 9999999999999999 578888876554321      122223222 3334444444332 3589999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      +++.|.
T Consensus        78 VnnAG~   83 (237)
T d1uzma1          78 VSNAGL   83 (237)
T ss_dssp             EEECSC
T ss_pred             Eeeecc
Confidence            998775

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=95.98  E-value=0.022  Score=47.32  Aligned_cols=82  Identities=15%  Similarity=0.199  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCeEEEEecChhHHHHHH----HhCCCeEEecCCCc-ccHHHHHHHHHHHcC
Q 017426          189 PETNVLIMGA-G--PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTNL-QDIAEEVEKIQKAMG  260 (372)
Q Consensus       189 ~g~~vlI~Ga-g--~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~----~lg~~~v~~~~~~~-~~~~~~~~~~~~~~~  260 (372)
                      .|+++||+|+ |  ++|.+++..+...|++ |+.+.++++..+.++    ..+.......+... .+..+...+.. ...
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~~-V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   81 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGAE-LAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELG-KVW   81 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCE-EEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH-TTC
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhh-hcc
Confidence            5889999987 6  6899999999999995 777778776554433    34444443333222 22222333332 235


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +..|+.+++.+.
T Consensus        82 ~~~d~~v~~a~~   93 (258)
T d1qsga_          82 PKFDGFVHSIGF   93 (258)
T ss_dssp             SSEEEEEECCCC
T ss_pred             cccceEEEeecc
Confidence            789999987644

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.97  E-value=0.036  Score=47.91  Aligned_cols=107  Identities=15%  Similarity=0.158  Sum_probs=69.2

Q ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH-----------hCC--Ce--EEecC
Q 017426          178 GVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE-----------IGA--DN--IVKVS  242 (372)
Q Consensus       178 a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~-----------lg~--~~--v~~~~  242 (372)
                      ...+++..+++++++||=.|+| .|..+.++|+..+...+++++.+++..+.+++           +|.  ..  ++.-+
T Consensus       140 ~~~~~~~~~l~~~~~vlD~GcG-~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd  218 (328)
T d1nw3a_         140 VAQMIDEIKMTDDDLFVDLGSG-VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGD  218 (328)
T ss_dssp             HHHHHHHSCCCTTCEEEEETCT-TSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECC
T ss_pred             HHHHHHHcCCCCCCEEEEcCCC-CCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECc
Confidence            3445678899999999889876 48888999999998889999999987766543           221  11  22212


Q ss_pred             CCcccHHHHHHHHHHHcCCcceEEEeC--CCcH---HHHHHHHHHhccCCEEEEEc
Q 017426          243 TNLQDIAEEVEKIQKAMGTGIDVSFDC--AGLN---KTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~d~vid~--~g~~---~~~~~~~~~l~~~G~~v~~g  293 (372)
                      -.+.++.+.+        ..+|+|+-.  .-.+   ..+...++.|+|||+++...
T Consensus       219 ~~~~~~~~~~--------~~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         219 FLSEEWRERI--------ANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             TTSHHHHHHH--------HHCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             cccccccccc--------CcceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            2222222221        236777742  1222   24556777899999998754

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.96  E-value=0.0019  Score=53.28  Aligned_cols=98  Identities=13%  Similarity=0.103  Sum_probs=63.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCC---eEEecCCCcccHHHHHHHHHHHcCCcc
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD---NIVKVSTNLQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      ..+|.+||-+|+|. |..+..+++..+. .+++++.+++..+.+++....   .+....   .+.......+   ..+.|
T Consensus        51 ~~~g~~VLdIGcG~-G~~a~~~a~~~~~-~v~~id~s~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~~f  122 (229)
T d1zx0a1          51 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK---GLWEDVAPTL---PDGHF  122 (229)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE---SCHHHHGGGS---CTTCE
T ss_pred             ccCCCeEEEeeccc-hHHHHHHHHcCCC-eEEEeCCCHHHHHHHHHHhhhccccccccc---cccccccccc---ccccc
Confidence            36789999998753 6777788876555 689999999999888765421   111111   1222111111   24679


Q ss_pred             eEEE-eCCCcH----------HHHHHHHHHhccCCEEEEE
Q 017426          264 DVSF-DCAGLN----------KTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       264 d~vi-d~~g~~----------~~~~~~~~~l~~~G~~v~~  292 (372)
                      |.++ |+....          ..+..+.+.|+|+|.++.+
T Consensus       123 D~i~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~  162 (229)
T d1zx0a1         123 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC  162 (229)
T ss_dssp             EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred             cceeecccccccccccccCHHHHHHHHHHHcCCCcEEEEE
Confidence            9985 654321          2455688899999999864

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=95.96  E-value=0.015  Score=45.24  Aligned_cols=123  Identities=18%  Similarity=0.138  Sum_probs=70.5

Q ss_pred             HHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCC-eEEecCCCcccHHHHHHHHHH
Q 017426          181 ACRRAN-IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       181 ~l~~~~-~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      .++..+ ..++.+|+|.|+|+.+.+++..+...+ .++.++.++.++.+.+ +.++.. .+........           
T Consensus         8 ~l~~~~~~~~~k~vlIlGaGGaarai~~aL~~~~-~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~-----------   75 (171)
T d1p77a1           8 DLQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI-----------   75 (171)
T ss_dssp             HHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC-----------
T ss_pred             HHHHcCCCCCCCEEEEECCcHHHHHHHHHHcccC-ceeeeccchHHHHHHHHHHHhhccccchhhhccc-----------
Confidence            454433 347889999999999999988877655 5788888998886654 444411 1111111100           


Q ss_pred             HcCCcceEEEeCCCcHHH---HHHHHHHhccCCEEEEEcCCCCCccccchhhhccCc-EEE-ee
Q 017426          258 AMGTGIDVSFDCAGLNKT---MSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREV-DVV-GV  316 (372)
Q Consensus       258 ~~~~~~d~vid~~g~~~~---~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~-~i~-~~  316 (372)
                       ....+|++|+|++..-.   .......++++..++.+-...+..+.++...-.++. ++. |.
T Consensus        76 -~~~~~diiIN~tp~g~~~~~~~~~~~~~~~~~~~~D~vy~~p~~T~~l~~A~~~g~~~v~~Gl  138 (171)
T d1p77a1          76 -PLQTYDLVINATSAGLSGGTASVDAEILKLGSAFYDMQYAKGTDTPFIALCKSLGLTNVSDGF  138 (171)
T ss_dssp             -CCSCCSEEEECCCC-------CCCHHHHHHCSCEEESCCCTTSCCHHHHHHHHTTCCCEECSH
T ss_pred             -cccccceeeecccccccccccchhhhhhcccceeeeeeccCcccHHHHHHHHHcCCCcccCcH
Confidence             13679999999875311   111233455666666665433333444444444443 443 44

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=95.93  E-value=0.035  Score=46.77  Aligned_cols=99  Identities=17%  Similarity=0.187  Sum_probs=67.1

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCC-e--EEecCCCcccHHHHHHHH
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD-N--IVKVSTNLQDIAEEVEKI  255 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~--v~~~~~~~~~~~~~~~~~  255 (372)
                      ....+++|.+||=+|+| .|..+..+++..|+ .|++++.++...+.+++    .|.. .  ++..+.  .++.      
T Consensus        61 ~~~~l~~~~~vLDiGcG-~G~~~~~la~~~~~-~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~--~~l~------  130 (282)
T d2o57a1          61 MTGVLQRQAKGLDLGAG-YGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF--LEIP------  130 (282)
T ss_dssp             HTTCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT--TSCS------
T ss_pred             HhcCCCCCCEEEEeCCC-CcHHHhhhhccCCc-EEEEEeccchhhhhhhccccccccccccccccccc--cccc------
Confidence            34678999999999986 36777888888888 68999999987666554    3432 1  222111  1110      


Q ss_pred             HHHcCCcceEEEeC-----CCc-HHHHHHHHHHhccCCEEEEEc
Q 017426          256 QKAMGTGIDVSFDC-----AGL-NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       256 ~~~~~~~~d~vid~-----~g~-~~~~~~~~~~l~~~G~~v~~g  293 (372)
                        ...+.||+|+-.     +.. ...+..+.++|+|+|+++...
T Consensus       131 --~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~  172 (282)
T d2o57a1         131 --CEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITD  172 (282)
T ss_dssp             --SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             --ccccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEE
Confidence              013679999753     222 246778999999999988765

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.86  E-value=0.022  Score=45.90  Aligned_cols=101  Identities=14%  Similarity=0.056  Sum_probs=64.6

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHHHc
Q 017426          184 RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       184 ~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      ...++||++||=.|+|. |..+..+++..+-..|++++.+++..+.+++    .+-...+..+........       ..
T Consensus        51 ~l~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~-------~~  122 (209)
T d1nt2a_          51 RLKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYS-------GI  122 (209)
T ss_dssp             CCCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTT-------TT
T ss_pred             cCCCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccc-------cc
Confidence            46789999999999854 6677777877765589999999987776543    332222222221111100       01


Q ss_pred             CCcceEEEeCCCcH----HHHHHHHHHhccCCEEEEE
Q 017426          260 GTGIDVSFDCAGLN----KTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       260 ~~~~d~vid~~g~~----~~~~~~~~~l~~~G~~v~~  292 (372)
                      -..+|+++......    ..+..+.+.|+++|.++..
T Consensus       123 ~~~vd~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  159 (209)
T d1nt2a_         123 VEKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM  159 (209)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cceEEEEEecccChhhHHHHHHHHHHHhccCCeEEEE
Confidence            24688887654322    2456678899999998875

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=95.82  E-value=0.021  Score=47.56  Aligned_cols=84  Identities=18%  Similarity=0.258  Sum_probs=52.6

Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChh----HHH---HHHHhCCCe-EEecCCCcccHHHHHHHHH
Q 017426          186 NIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY----RLS---VAKEIGADN-IVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       186 ~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~----~~~---~~~~lg~~~-v~~~~~~~~~~~~~~~~~~  256 (372)
                      ..+|+.++||+|+ +++|+++++.+...|+++++.+.+++.    ..+   .+++.|... ++..|-.+.+   .++++.
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~---~~~~~~   81 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRE---SVRELL   81 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHH---HHHHHH
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHH---HHHHhh
Confidence            4689999999987 999999999888899976777766532    222   234456432 2223322222   233333


Q ss_pred             HH--cCCcceEEEeCCCc
Q 017426          257 KA--MGTGIDVSFDCAGL  272 (372)
Q Consensus       257 ~~--~~~~~d~vid~~g~  272 (372)
                      +.  ...++|.++.+.|.
T Consensus        82 ~~i~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          82 GGIGDDVPLSAVFHAAAT   99 (259)
T ss_dssp             HTSCTTSCEEEEEECCCC
T ss_pred             cccccccccccccccccc
Confidence            21  13479999988775

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=95.77  E-value=0.048  Score=45.19  Aligned_cols=94  Identities=21%  Similarity=0.267  Sum_probs=61.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHHHcCCc
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~  262 (372)
                      .++|++||=.|+|. |..++.++ ..|+ .|++++.+++..+.+++    .+....+..    .+..+    ..  ..+.
T Consensus       118 ~~~g~~VLDiGcGs-G~l~i~aa-~~g~-~V~gvDis~~av~~A~~na~~n~~~~~~~~----~d~~~----~~--~~~~  184 (254)
T d2nxca1         118 LRPGDKVLDLGTGS-GVLAIAAE-KLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLE----GSLEA----AL--PFGP  184 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHH-HTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE----SCHHH----HG--GGCC
T ss_pred             cCccCEEEEcccch-hHHHHHHH-hcCC-EEEEEECChHHHHHHHHHHHHcCCceeEEe----ccccc----cc--cccc
Confidence            57999999898853 66666554 4687 68999999988777654    344322211    22222    11  2468


Q ss_pred             ceEEEeCCCcH---HHHHHHHHHhccCCEEEEEc
Q 017426          263 IDVSFDCAGLN---KTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       263 ~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ||+|+......   ..+..+.+.|+|+|+++..|
T Consensus       185 fD~V~ani~~~~l~~l~~~~~~~LkpGG~lilSg  218 (254)
T d2nxca1         185 FDLLVANLYAELHAALAPRYREALVPGGRALLTG  218 (254)
T ss_dssp             EEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cchhhhccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence            99999765433   23456778899999998754

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.69  E-value=0.017  Score=47.80  Aligned_cols=81  Identities=17%  Similarity=0.252  Sum_probs=49.1

Q ss_pred             CEEEEECC-CHHHHHHHHHHH---HcCCCeEEEEecChhHHHHHHHh----CCCeEEecCCCc-ccHHHHHHHHHH-HcC
Q 017426          191 TNVLIMGA-GPIGLVTMLAAR---AFGAPRIVIVDVDDYRLSVAKEI----GADNIVKVSTNL-QDIAEEVEKIQK-AMG  260 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~---~~g~~~vv~v~~~~~~~~~~~~l----g~~~v~~~~~~~-~~~~~~~~~~~~-~~~  260 (372)
                      .+|||+|+ +++|.++++.+.   ..|+ .|+.+.+++++.+.++++    +-..++..|-.+ ++..+.+.++.+ ...
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            47999998 999999886554   3577 677888888765544432    222233334323 334444443321 124


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +++|+++++.|.
T Consensus        82 ~~iDiLvnNAg~   93 (248)
T d1snya_          82 QGLNVLFNNAGI   93 (248)
T ss_dssp             GCCSEEEECCCC
T ss_pred             CCcceEEeeccc
Confidence            679999998764

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=95.61  E-value=0.026  Score=44.48  Aligned_cols=99  Identities=19%  Similarity=0.215  Sum_probs=64.3

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCC-eEEecCCCcccHHHHHHHHHH
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD-NIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      ...++++|++||=.|+|. |..++.+++. +. .|++++.+++..+.+++    .|.. .+....   .+..+...    
T Consensus        27 ~~l~~~~g~~VLDiGcGs-G~~s~~lA~~-~~-~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~---gda~~~~~----   96 (186)
T d1l3ia_          27 CLAEPGKNDVAVDVGCGT-GGVTLELAGR-VR-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLME---GDAPEALC----   96 (186)
T ss_dssp             HHHCCCTTCEEEEESCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE---SCHHHHHT----
T ss_pred             HhcCCCCCCEEEEEECCe-Eccccccccc-ce-EEEEecCCHHHHHHHHHHHHHcCCCcceEEEE---Cchhhccc----
Confidence            457889999999888743 4555566654 33 79999999987776654    5642 332211   23222221    


Q ss_pred             HcCCcceEEEeCCCc---HHHHHHHHHHhccCCEEEEE
Q 017426          258 AMGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       258 ~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~  292 (372)
                       ....+|.|+.....   ...++.+.+.|+++|+++..
T Consensus        97 -~~~~~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~  133 (186)
T d1l3ia_          97 -KIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVT  133 (186)
T ss_dssp             -TSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEE
T ss_pred             -ccCCcCEEEEeCccccchHHHHHHHHHhCcCCEEEEE
Confidence             24689999865432   34677788899999998765

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=95.58  E-value=0.038  Score=46.39  Aligned_cols=97  Identities=19%  Similarity=0.150  Sum_probs=65.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC-----C----CeEEecCCCcccHHHHHHHHHHH
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG-----A----DNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg-----~----~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      ...++|||+|+|. |..+-.+++..+...+.+++.+++-.+.++++-     +    ..-+..    .|..+.++    .
T Consensus        74 ~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~----~D~~~~l~----~  144 (274)
T d1iy9a_          74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV----DDGFMHIA----K  144 (274)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE----SCSHHHHH----T
T ss_pred             CCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEe----chHHHHHh----h
Confidence            4557999998643 566667777778778999999999988887753     1    111111    23233333    2


Q ss_pred             cCCcceEEE-eCCC---------cHHHHHHHHHHhccCCEEEEEc
Q 017426          259 MGTGIDVSF-DCAG---------LNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       259 ~~~~~d~vi-d~~g---------~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      .+..+|+|| |...         +.+-++.+.+.|+++|.++...
T Consensus       145 ~~~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~  189 (274)
T d1iy9a_         145 SENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT  189 (274)
T ss_dssp             CCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred             cCCCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEec
Confidence            357899997 4322         2346788999999999998765

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.56  E-value=0.02  Score=46.83  Aligned_cols=103  Identities=17%  Similarity=0.132  Sum_probs=67.3

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHHHh----CCCeEEecCCCcccHHHHHHHHH
Q 017426          182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       182 l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~~~~~~  256 (372)
                      ++...++||++||=.|+|. |..+..+++..|- ..|++++.+++..+.+++.    +-...+..+.....   ....  
T Consensus        66 l~~l~i~pG~~VLDlGaGs-G~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~---~~~~--  139 (227)
T d1g8aa_          66 LKNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPE---EYRA--  139 (227)
T ss_dssp             CCCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGG---GGTT--
T ss_pred             ccccccCCCCEEEEeccCC-CHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcc---cccc--
Confidence            3556799999999999854 7888888888763 3799999999887766543    21222222221111   0100  


Q ss_pred             HHcCCcceEEEeCCCcH----HHHHHHHHHhccCCEEEEE
Q 017426          257 KAMGTGIDVSFDCAGLN----KTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       257 ~~~~~~~d~vid~~g~~----~~~~~~~~~l~~~G~~v~~  292 (372)
                        ....+|+++..+..+    ..+..+.+.|+++|.++..
T Consensus       140 --~~~~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         140 --LVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             --TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             --cccceEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence              135789888654332    2466778899999998875

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.44  E-value=0.055  Score=40.90  Aligned_cols=83  Identities=22%  Similarity=0.243  Sum_probs=56.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH-HhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCC
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  270 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  270 (372)
                      +|.++|+|.+|.+.++-+...|...+++.++++++.+.+. ++|.....   + .+.            -...|+||=++
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~~---~-~~~------------v~~~Div~lav   65 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSA---T-LPE------------LHSDDVLILAV   65 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEES---S-CCC------------CCTTSEEEECS
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhccccccc---c-ccc------------ccccceEEEec
Confidence            5788899999998887444445457899999998887665 46654321   1 111            13579999888


Q ss_pred             CcHHHHHHHHHHhccCCEEEE
Q 017426          271 GLNKTMSTALGATCAGGKVCL  291 (372)
Q Consensus       271 g~~~~~~~~~~~l~~~G~~v~  291 (372)
                      - +..+....+-+.+.++.+.
T Consensus        66 k-P~~~~~v~~~l~~~~~~vi   85 (152)
T d1yqga2          66 K-PQDMEAACKNIRTNGALVL   85 (152)
T ss_dssp             C-HHHHHHHHTTCCCTTCEEE
T ss_pred             C-HHHHHHhHHHHhhcccEEe
Confidence            7 4566777766766665443

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.42  E-value=0.063  Score=45.40  Aligned_cols=99  Identities=21%  Similarity=0.250  Sum_probs=65.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC---------CCeEEecCCCcccHHHHHHHHHHH
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG---------ADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg---------~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      ...++|||+|+|. |..+-.+++..+.+.+.+++.+++-.+.++++-         ...-+.+    .|-.+.+++   .
T Consensus        79 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~----~Da~~~l~~---~  150 (290)
T d1xj5a_          79 PNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI----GDGVAFLKN---A  150 (290)
T ss_dssp             SCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE----SCHHHHHHT---S
T ss_pred             CCCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEE----ccHHHHHhh---c
Confidence            4557999998643 555667778778778999999999988888753         1111111    233333322   2


Q ss_pred             cCCcceEEE-eCCC---------cHHHHHHHHHHhccCCEEEEEcC
Q 017426          259 MGTGIDVSF-DCAG---------LNKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       259 ~~~~~d~vi-d~~g---------~~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      .++.+|+|| |+..         +.+-++.+.+.|+++|.++....
T Consensus       151 ~~~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~~  196 (290)
T d1xj5a_         151 AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAE  196 (290)
T ss_dssp             CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECC
T ss_pred             cccCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEecC
Confidence            345899887 4432         12457789999999999998753

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.39  E-value=0.07  Score=42.78  Aligned_cols=94  Identities=15%  Similarity=0.182  Sum_probs=61.2

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCe-EEecCCCcccHHHHHHHHHHHcC
Q 017426          186 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADN-IVKVSTNLQDIAEEVEKIQKAMG  260 (372)
Q Consensus       186 ~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-v~~~~~~~~~~~~~~~~~~~~~~  260 (372)
                      .++++++||=+|||. |..+..+++ .|. .+++++.+++..+.+++    .+... .+..+.  .++.        ...
T Consensus        34 ~l~~~~~ILDiGcG~-G~~~~~la~-~~~-~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~--~~l~--------~~~  100 (226)
T d1ve3a1          34 YMKKRGKVLDLACGV-GGFSFLLED-YGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDA--RKLS--------FED  100 (226)
T ss_dssp             SCCSCCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCT--TSCC--------SCT
T ss_pred             hcCCCCEEEEECCCc-chhhhhHhh-hhc-ccccccccccchhhhhhhhcccccccccccccc--cccc--------ccC
Confidence            357889999999864 777778876 476 69999999988776654    33222 222111  1110        013


Q ss_pred             CcceEEEeCCC-----cH---HHHHHHHHHhccCCEEEEE
Q 017426          261 TGIDVSFDCAG-----LN---KTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       261 ~~~d~vid~~g-----~~---~~~~~~~~~l~~~G~~v~~  292 (372)
                      ..+|+|+-...     ..   ..+..+.+.|+|+|+++..
T Consensus       101 ~~fD~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         101 KTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             TCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cCceEEEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            67999875322     11   2567788899999998754

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.35  E-value=0.047  Score=44.95  Aligned_cols=47  Identities=26%  Similarity=0.331  Sum_probs=38.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH-HHHHhCCC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKEIGAD  236 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~-~~~~lg~~  236 (372)
                      +|..+||+|+ +++|.++++-+...|+ +|+.+++++++.+ .+++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCC
Confidence            5889999987 9999999999999999 5777777776655 55667644

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.31  E-value=0.087  Score=46.67  Aligned_cols=110  Identities=15%  Similarity=0.121  Sum_probs=70.7

Q ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh-----------C----CCeEEec
Q 017426          177 VGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-----------G----ADNIVKV  241 (372)
Q Consensus       177 ~a~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l-----------g----~~~v~~~  241 (372)
                      ....+++..++++|+++|=+|+| +|..+.++|+..|...+++++.++...+.+++.           +    ...... 
T Consensus       204 ~i~~Il~~l~Lkpgd~fLDLGCG-~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~-  281 (406)
T d1u2za_         204 FLSDVYQQCQLKKGDTFMDLGSG-VGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL-  281 (406)
T ss_dssp             HHHHHHHHTTCCTTCEEEEESCT-TSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE-
T ss_pred             HHHHHHHHhCCCCCCEEEeCCCC-CcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeee-
Confidence            35567788999999998878876 489999999999987899999999877666542           1    111111 


Q ss_pred             CCCcccHHHHHHHHHHHcCCcceEEEeC-C-CcH---HHHHHHHHHhccCCEEEEEc
Q 017426          242 STNLQDIAEEVEKIQKAMGTGIDVSFDC-A-GLN---KTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~d~vid~-~-g~~---~~~~~~~~~l~~~G~~v~~g  293 (372)
                      .....+ .......    -..+|+++-. . -.+   ..+...++.|+|||+++...
T Consensus       282 ~~~f~~-~~~~d~~----~~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         282 KKSFVD-NNRVAEL----IPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             SSCSTT-CHHHHHH----GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             eechhh-ccccccc----cccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence            110000 1112111    2457787742 1 222   34567778899999998753

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.24  E-value=0.0099  Score=48.69  Aligned_cols=106  Identities=12%  Similarity=0.011  Sum_probs=64.8

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEE-------------ecCCCcccH-HH
Q 017426          185 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV-------------KVSTNLQDI-AE  250 (372)
Q Consensus       185 ~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~-------------~~~~~~~~~-~~  250 (372)
                      ...+++.+||..|||. |..+..||+ .|+ .|++++.|++..+.+++.......             ......-++ ..
T Consensus        41 l~~~~~~rvLd~GCG~-G~~a~~LA~-~G~-~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  117 (229)
T d2bzga1          41 LKGKSGLRVFFPLCGK-AVEMKWFAD-RGH-SVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCC  117 (229)
T ss_dssp             HTTCCSCEEEETTCTT-CTHHHHHHH-TTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEES
T ss_pred             cCCCCCCEEEEeCCCC-cHHHHHHHh-CCC-cEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEc
Confidence            4568899999999865 777777775 698 699999999988877653221100             000000000 00


Q ss_pred             HHHHHHHHcCCcceEEEeCCCc--------HHHHHHHHHHhccCCEEEEEc
Q 017426          251 EVEKIQKAMGTGIDVSFDCAGL--------NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       251 ~~~~~~~~~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      .+..+.....+.+|+|+++.--        ...+..+.++|+|+|+++...
T Consensus       118 d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~  168 (229)
T d2bzga1         118 SIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCV  168 (229)
T ss_dssp             CGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             chhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEE
Confidence            0111111124679999985421        235667889999999977664

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=95.24  E-value=0.0092  Score=41.32  Aligned_cols=35  Identities=29%  Similarity=0.298  Sum_probs=30.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      .|.+|+|+|.|.+|+++++++...|++ |++.+.++
T Consensus         4 ~~K~v~ViGlG~sG~s~a~~L~~~g~~-v~~~D~~~   38 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVDFFLARGVT-PRVMDTRM   38 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHHTTCC-CEEEESSS
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCCE-EEEeeCCc
Confidence            467999999999999999999999995 77776644

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.18  E-value=0.048  Score=44.46  Aligned_cols=103  Identities=12%  Similarity=0.055  Sum_probs=65.2

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC----CCeEEecCCCcccHHHHHHHHHH
Q 017426          182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG----ADNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       182 l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg----~~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      ++...++||++||=.|||. |..+..+++......|++++.+++..+.++..-    -...+..+......   ...   
T Consensus        67 l~~l~ikpG~~VLDlGcGs-G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~---~~~---  139 (230)
T d1g8sa_          67 LKVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQE---YAN---  139 (230)
T ss_dssp             CCCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGG---GTT---
T ss_pred             HHhCCCCCCCEEEEeCEEc-CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCcc---ccc---
Confidence            3456789999999999853 777778887654448999999998887766542    11222222211110   110   


Q ss_pred             HcCCcceEEEeCCCcH----HHHHHHHHHhccCCEEEEE
Q 017426          258 AMGTGIDVSFDCAGLN----KTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       258 ~~~~~~d~vid~~g~~----~~~~~~~~~l~~~G~~v~~  292 (372)
                       ....+|+++......    ..+..+...|+++|.++..
T Consensus       140 -~~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~  177 (230)
T d1g8sa_         140 -IVEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             -TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             -ccceeEEeeccccchHHHHHHHHHHHHhcccCceEEEE
Confidence             124567777655432    2356677889999998875

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.18  E-value=0.083  Score=40.27  Aligned_cols=90  Identities=14%  Similarity=0.107  Sum_probs=64.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCC
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  271 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  271 (372)
                      +|-|+|.|.+|...+.-+...|+ .|++.++++++.+.+.+.++...       .+..    +..    ...|+||-|+.
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~~-------~~~~----e~~----~~~d~ii~~v~   65 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAETA-------STAK----AIA----EQCDVIITMLP   65 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-------SSHH----HHH----HHCSEEEECCS
T ss_pred             EEEEEehhHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHhhhhhc-------ccHH----HHH----hCCCeEEEEcC
Confidence            57788999999999988888999 58899999999998888886431       1222    222    35799999998


Q ss_pred             cHHHHHHH-------HHHhccCCEEEEEcCCCC
Q 017426          272 LNKTMSTA-------LGATCAGGKVCLVGMGHH  297 (372)
Q Consensus       272 ~~~~~~~~-------~~~l~~~G~~v~~g~~~~  297 (372)
                      .+......       ...+.++-.++.++...+
T Consensus        66 ~~~~v~~v~~~~~~~~~~~~~g~iiid~sT~~p   98 (161)
T d1vpda2          66 NSPHVKEVALGENGIIEGAKPGTVLIDMSSIAP   98 (161)
T ss_dssp             SHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCH
T ss_pred             CHHHHHHHHhCCcchhhccCCCCEEEECCCCCH
Confidence            76555543       345566666776655443

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.14  E-value=0.1  Score=40.29  Aligned_cols=102  Identities=20%  Similarity=0.134  Sum_probs=64.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCeEEEEecCh-hHHHHHHHhCCCeEEecCCCcccHHHHHHHHH-------HHcCCc
Q 017426          192 NVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDD-YRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ-------KAMGTG  262 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~-g~~~vv~v~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~-------~~~~~~  262 (372)
                      +|.|.|.|-+|..+++.+... ..+.|.+.+.++ .....+...+.+......    +......+..       .....+
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~   79 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASE----EFIPRFEKEGFEVAGTLNDLLEK   79 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSG----GGHHHHHHHTCCCSCBHHHHHTT
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccc----cceeeecccCccccchhhhhhcc
Confidence            788999999999888877654 354333444433 445566666755433211    1111111100       000247


Q ss_pred             ceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCCCC
Q 017426          263 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH  297 (372)
Q Consensus       263 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  297 (372)
                      +|+|+||+|.-...+.+-.++..+-+.+..+....
T Consensus        80 vDvViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~~  114 (172)
T d2czca2          80 VDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGEKA  114 (172)
T ss_dssp             CSEEEECCSTTHHHHHHHHHHHHTCEEEECTTSCG
T ss_pred             CCEEEECCCCCCCHHHHHHHHHcCCCEEEECCCCc
Confidence            99999999988777888889998888888775443

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.93  E-value=0.031  Score=44.57  Aligned_cols=67  Identities=30%  Similarity=0.427  Sum_probs=52.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .|.+|+|.|.|.+|..+++++...|+ +|++++.+.++......+|...+-     .++       +.   ..++|+++=
T Consensus        26 ~gk~v~IqG~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~g~~~~~-----~~~-------~~---~~~~DI~iP   89 (201)
T d1c1da1          26 DGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAVA-----LED-------VL---STPCDVFAP   89 (201)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEECC-----GGG-------GG---GCCCSEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhhcccccC-----ccc-------cc---cccceeeec
Confidence            68899999999999999999999999 688999999998888888875431     111       11   357888885


Q ss_pred             CCC
Q 017426          269 CAG  271 (372)
Q Consensus       269 ~~g  271 (372)
                      |..
T Consensus        90 cA~   92 (201)
T d1c1da1          90 CAM   92 (201)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            544

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.81  E-value=0.043  Score=44.34  Aligned_cols=72  Identities=17%  Similarity=0.117  Sum_probs=44.9

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~-~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .+|||+|+ |.+|..++..+...|.+ .++...+++++.+.+.. +.. ++..+.  .+. +.+.+..    .++|.|+.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~-~~~~d~--~~~-~~~~~~~----~~~d~vi~   74 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EAD-VFIGDI--TDA-DSINPAF----QGIDALVI   74 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTT-EEECCT--TSH-HHHHHHH----TTCSEEEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcE-EEEeee--ccc-ccccccc----ccceeeEE
Confidence            48999998 99999999999998865 34555677766543321 232 222222  222 2233332    47899998


Q ss_pred             CCC
Q 017426          269 CAG  271 (372)
Q Consensus       269 ~~g  271 (372)
                      +.+
T Consensus        75 ~a~   77 (252)
T d2q46a1          75 LTS   77 (252)
T ss_dssp             CCC
T ss_pred             EEe
Confidence            765

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.79  E-value=0.09  Score=43.00  Aligned_cols=95  Identities=20%  Similarity=0.217  Sum_probs=63.4

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh----CCC-eEEecCCCcccHHHHHHHHHH
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GAD-NIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      +....+++.+||=.|+|. |..+..+++ .|+ .|++++.+++-.+.+++.    +.. .++.-+  -.++       . 
T Consensus        35 ~~~~~~~~~~iLDiGcGt-G~~~~~l~~-~~~-~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d--~~~l-------~-  101 (251)
T d1wzna1          35 KEDAKREVRRVLDLACGT-GIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQGD--VLEI-------A-  101 (251)
T ss_dssp             HHTCSSCCCEEEEETCTT-CHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEESC--GGGC-------C-
T ss_pred             HHhcCCCCCEEEEeCCCC-Cccchhhcc-cce-EEEEEeeccccccccccccccccccchheehh--hhhc-------c-
Confidence            345567778999999865 777777776 577 699999999888776653    322 222211  1111       0 


Q ss_pred             HcCCcceEEEeCCCc------H---HHHHHHHHHhccCCEEEE
Q 017426          258 AMGTGIDVSFDCAGL------N---KTMSTALGATCAGGKVCL  291 (372)
Q Consensus       258 ~~~~~~d~vid~~g~------~---~~~~~~~~~l~~~G~~v~  291 (372)
                       ..+.+|+|+...+.      +   ..+..+.++|+|+|.++.
T Consensus       102 -~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         102 -FKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             -CCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             -cccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence             14679999865332      1   356778899999999875

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=94.78  E-value=0.2  Score=37.98  Aligned_cols=94  Identities=20%  Similarity=0.227  Sum_probs=54.2

Q ss_pred             CEEEEECCCHHHH-HHHHHHHHcC-CCeEEEEecChh--HHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          191 TNVLIMGAGPIGL-VTMLAARAFG-APRIVIVDVDDY--RLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       191 ~~vlI~Gag~~G~-~ai~l~~~~g-~~~vv~v~~~~~--~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      =++.|.|+|.+|. ..+++++... .+.+.+++++++  ...+++++|.....       +..+.+.+..  ...++|+|
T Consensus         5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~-------~~~d~l~~~~--~~~~iDiV   75 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY-------AGVEGLIKLP--EFADIDFV   75 (157)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES-------SHHHHHHHSG--GGGGEEEE
T ss_pred             cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc-------cceeeeeecc--cccccCEE
Confidence            3788999999986 5678887654 444444455543  45677888876421       1112222211  12479999


Q ss_pred             EeCCCcHHHHHHHHH--HhccCCEEEEEc
Q 017426          267 FDCAGLNKTMSTALG--ATCAGGKVCLVG  293 (372)
Q Consensus       267 id~~g~~~~~~~~~~--~l~~~G~~v~~g  293 (372)
                      |+++....+....+.  .+..+=.++..+
T Consensus        76 f~ATpag~h~~~~~~~~aa~~G~~VID~s  104 (157)
T d1nvmb1          76 FDATSASAHVQNEALLRQAKPGIRLIDLT  104 (157)
T ss_dssp             EECSCHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEcCCchhHHHhHHHHHHHHcCCEEEEcc
Confidence            999886555554433  344333444443

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.76  E-value=0.091  Score=44.21  Aligned_cols=98  Identities=22%  Similarity=0.227  Sum_probs=63.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC---------CeEEecCCCcccHHHHHHHHHH
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA---------DNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~---------~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      .+..++|||+|+|. |..+-.+++..+...+.+++-+++-.+.++++-.         ..-+..    .|-.+.+    +
T Consensus        76 ~~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~----~Da~~~l----~  146 (285)
T d2o07a1          76 HPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV----GDGFEFM----K  146 (285)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE----SCHHHHH----H
T ss_pred             CcCcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEE----ccHHHHH----h
Confidence            34568999997643 5556667777777789999999999888877531         111111    2333333    2


Q ss_pred             HcCCcceEEE-eCCCcH---------HHHHHHHHHhccCCEEEEEc
Q 017426          258 AMGTGIDVSF-DCAGLN---------KTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       258 ~~~~~~d~vi-d~~g~~---------~~~~~~~~~l~~~G~~v~~g  293 (372)
                      .....+|+|| |.....         +-++.+-+.|+++|.++...
T Consensus       147 ~~~~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  192 (285)
T d2o07a1         147 QNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  192 (285)
T ss_dssp             TCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             cCCCCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEec
Confidence            2357899998 432211         24667888999999998764

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.71  E-value=0.16  Score=43.20  Aligned_cols=102  Identities=18%  Similarity=0.139  Sum_probs=64.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCC-----CcccHHHHHHHHHHHcCCc
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-----NLQDIAEEVEKIQKAMGTG  262 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~-----~~~~~~~~~~~~~~~~~~~  262 (372)
                      ...++|||+|+|. |..+-.+++......|.+++.+++-.+.++++-....-.+++     .-.|-.+.+++    ....
T Consensus       105 ~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~----~~~~  179 (312)
T d2b2ca1         105 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN----HKNE  179 (312)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH----CTTC
T ss_pred             CCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHh----CCCC
Confidence            4457999998654 455667777777778999999999999998853210000000     01333334432    3678


Q ss_pred             ceEEEeCCCcH----------HHHHHHHHHhccCCEEEEEcC
Q 017426          263 IDVSFDCAGLN----------KTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       263 ~d~vid~~g~~----------~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      +|+||--...+          +-++.+.+.|+++|.++..+.
T Consensus       180 yDvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~~  221 (312)
T d2b2ca1         180 FDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGE  221 (312)
T ss_dssp             EEEEEECCC-------------HHHHHHHHEEEEEEEEEECC
T ss_pred             CCEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEecC
Confidence            99998422111          235667889999999998753

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.63  E-value=0.085  Score=45.35  Aligned_cols=104  Identities=24%  Similarity=0.225  Sum_probs=63.3

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHHHcCC
Q 017426          186 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       186 ~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~~~~~  261 (372)
                      .+++|++||=.++| +|.+++.+++ .|+..|+.++.+++..+.+++    .|....+.+  ...|..+.+..+.. .+.
T Consensus       142 ~~~~g~~VLDl~~g-~G~~si~~a~-~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~--~~~d~~~~~~~~~~-~~~  216 (324)
T d2as0a2         142 WVQPGDRVLDVFTY-TGGFAIHAAI-AGADEVIGIDKSPRAIETAKENAKLNGVEDRMKF--IVGSAFEEMEKLQK-KGE  216 (324)
T ss_dssp             GCCTTCEEEETTCT-TTHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEE--EESCHHHHHHHHHH-TTC
T ss_pred             hcCCCCeeecccCc-ccchhhhhhh-cCCcEEEeecCCHHHHHHHHHHHHHcCCCcccee--eechhhhhhHHHHh-ccC
Confidence            36889999876542 2334444443 477789999999998887654    454321111  11344444444332 356


Q ss_pred             cceEEEeCCCc---------------HHHHHHHHHHhccCCEEEEEcC
Q 017426          262 GIDVSFDCAGL---------------NKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       262 ~~d~vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      .||+|+--...               ...+..+.+.|+|+|.++.+.-
T Consensus       217 ~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~  264 (324)
T d2as0a2         217 KFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC  264 (324)
T ss_dssp             CEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred             CCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            89999842221               1245667888999999888753

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=94.59  E-value=0.11  Score=44.30  Aligned_cols=96  Identities=24%  Similarity=0.254  Sum_probs=64.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC------C----C-eEEecCCCcccHHHHHHHHH
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG------A----D-NIVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg------~----~-~v~~~~~~~~~~~~~~~~~~  256 (372)
                      +..++|||+|+|. |..+-.+++......|.+++.+++-.+.++++-      +    . .++.     .|..+.+++  
T Consensus        76 ~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~-----~Da~~~l~~--  147 (312)
T d1uira_          76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI-----DDARAYLER--  147 (312)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE-----SCHHHHHHH--
T ss_pred             CCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEE-----chHHHHhhh--
Confidence            4457999998653 566667777766668999999999888877642      1    1 1221     344444433  


Q ss_pred             HHcCCcceEEE-eCC---C---------cHHHHHHHHHHhccCCEEEEEc
Q 017426          257 KAMGTGIDVSF-DCA---G---------LNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       257 ~~~~~~~d~vi-d~~---g---------~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                        ....+|+|| |..   +         +.+-++.+.+.|+++|.++...
T Consensus       148 --~~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~~  195 (312)
T d1uira_         148 --TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT  195 (312)
T ss_dssp             --CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred             --cCCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEec
Confidence              367899997 331   1         1235677889999999988754

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.54  E-value=0.14  Score=38.88  Aligned_cols=100  Identities=18%  Similarity=0.302  Sum_probs=67.2

Q ss_pred             HHHHHHHh-cC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHH
Q 017426          177 VGVHACRR-AN-IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       177 ~a~~~l~~-~~-~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~  254 (372)
                      +.+.++.+ .+ .-.|.+++|.|-|-+|...++.++.+|+ +|++++.++-+.-.+.--|.. +.       .    +.+
T Consensus         9 S~~~~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~-~V~v~e~dp~~al~A~~dG~~-v~-------~----~~~   75 (163)
T d1li4a1           9 SLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGA-RVIITEIDPINALQAAMEGYE-VT-------T----MDE   75 (163)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC-------C----HHH
T ss_pred             hHHHHHHHHhCceecCCEEEEeccccccHHHHHHHHhCCC-eeEeeecccchhHHhhcCceE-ee-------e----hhh
Confidence            45556643 33 4589999999999999999999999999 699999988664444433432 21       1    222


Q ss_pred             HHHHcCCcceEEEeCCCcHHHH-HHHHHHhccCCEEEEEc
Q 017426          255 IQKAMGTGIDVSFDCAGLNKTM-STALGATCAGGKVCLVG  293 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g  293 (372)
                      .    -...|+++-++|....+ ..-++.|+++-.+...|
T Consensus        76 a----~~~adivvtaTGn~~vI~~eh~~~MKdgaIL~N~G  111 (163)
T d1li4a1          76 A----CQEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIG  111 (163)
T ss_dssp             H----TTTCSEEEECSSCSCSBCHHHHTTCCTTEEEEECS
T ss_pred             h----hhhccEEEecCCCccchhHHHHHhccCCeEEEEec
Confidence            2    25689999999875322 34566777555444444

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.47  E-value=0.018  Score=45.35  Aligned_cols=36  Identities=22%  Similarity=0.489  Sum_probs=30.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChh
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY  225 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~  225 (372)
                      +++|+|+|+|+.|+.++..+++.|++.|.+.++++.
T Consensus         4 ~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            579999999999999999999999965777776654

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=94.42  E-value=0.087  Score=43.58  Aligned_cols=80  Identities=16%  Similarity=0.136  Sum_probs=46.1

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHH-H-HHHHh----CCCeEEec-C-CCcccHHHHHHHHH---HHc
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRL-S-VAKEI----GADNIVKV-S-TNLQDIAEEVEKIQ---KAM  259 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~-~-~~~~l----g~~~v~~~-~-~~~~~~~~~~~~~~---~~~  259 (372)
                      ..||+|+ +++|.++++.+...|+ +|+.++++.++. + +.+++    +....... + ....+..+.+.++.   ...
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            4688887 9999999999999999 577777664432 2 22332    33332211 1 11122222232221   112


Q ss_pred             CCcceEEEeCCCc
Q 017426          260 GTGIDVSFDCAGL  272 (372)
Q Consensus       260 ~~~~d~vid~~g~  272 (372)
                      -+.+|+++++.|.
T Consensus        82 ~g~iDilvnnAG~   94 (266)
T d1mxha_          82 FGRCDVLVNNASA   94 (266)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             hCCCCEEEECCcc
Confidence            3589999998873

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=94.38  E-value=0.12  Score=42.78  Aligned_cols=82  Identities=20%  Similarity=0.370  Sum_probs=50.0

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCeEEEEecChhHH-H-HHHHhCCCe-EEecCCCc-ccHHHHHHHHHHH--c
Q 017426          189 PETNVLIMGA-G--PIGLVTMLAARAFGAPRIVIVDVDDYRL-S-VAKEIGADN-IVKVSTNL-QDIAEEVEKIQKA--M  259 (372)
Q Consensus       189 ~g~~vlI~Ga-g--~~G~~ai~l~~~~g~~~vv~v~~~~~~~-~-~~~~lg~~~-v~~~~~~~-~~~~~~~~~~~~~--~  259 (372)
                      .|.++||+|+ |  ++|.++++-+...|+ .|+.+.++.++. + ..+.++... .+..+-.+ .+..+.+..+.+.  .
T Consensus         5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~   83 (268)
T d2h7ma1           5 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   83 (268)
T ss_dssp             TTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcccc
Confidence            5789999984 4  599999999999999 467777766553 3 334555322 22222222 2223333333221  2


Q ss_pred             CCcceEEEeCCC
Q 017426          260 GTGIDVSFDCAG  271 (372)
Q Consensus       260 ~~~~d~vid~~g  271 (372)
                      .+.+|+++++.|
T Consensus        84 ~~~ld~~i~~ag   95 (268)
T d2h7ma1          84 GNKLDGVVHSIG   95 (268)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCcceeeeccc
Confidence            457999999877

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.36  E-value=0.13  Score=43.39  Aligned_cols=97  Identities=20%  Similarity=0.214  Sum_probs=63.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC---------C-eEEecCCCcccHHHHHHHHHH
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA---------D-NIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~---------~-~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      +..++|||+|+|. |..+-.+++..+...|.+++.+++-.+.++++-.         . .++.     .|..+.+    +
T Consensus        88 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~-----~Da~~~l----~  157 (295)
T d1inla_          88 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI-----ANGAEYV----R  157 (295)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE-----SCHHHHG----G
T ss_pred             CCCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEh-----hhHHHHH----h
Confidence            3457999997643 4556677777777789999999998888877531         1 1111     2333333    3


Q ss_pred             HcCCcceEEE-eCCC----------cHHHHHHHHHHhccCCEEEEEcC
Q 017426          258 AMGTGIDVSF-DCAG----------LNKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       258 ~~~~~~d~vi-d~~g----------~~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      .....+|+|| |+..          +.+-++.+.+.|+++|.++....
T Consensus       158 ~~~~~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~~  205 (295)
T d1inla_         158 KFKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE  205 (295)
T ss_dssp             GCSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred             cCCCCCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEecC
Confidence            3467899998 3321          12356678899999999988653

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=94.28  E-value=0.046  Score=47.32  Aligned_cols=46  Identities=15%  Similarity=0.142  Sum_probs=37.1

Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH
Q 017426          186 NIGPETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE  232 (372)
Q Consensus       186 ~~~~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~  232 (372)
                      -+++|.+|||+|+ |-+|..+++.+...|+ .|+++.++.++.+.++.
T Consensus         7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~~   53 (342)
T d1y1pa1           7 VLPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQK   53 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred             CCCCcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHHH
Confidence            3678999999998 9999999998888898 57777787777665543

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.26  E-value=0.0076  Score=46.51  Aligned_cols=91  Identities=11%  Similarity=0.057  Sum_probs=52.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCC
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  271 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  271 (372)
                      +|+|+|+|.+|.+....+...|. .|..+++++++.+.....+............+..+.+        ..+|++|-++.
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~D~iii~vk   72 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFL--------ATSDLLLVTLK   72 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHH--------HTCSEEEECSC
T ss_pred             EEEEECcCHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCccccccccccchhhhh--------cccceEEEeec
Confidence            68999999999998888888998 5777777776443322222211000000001111111        47999999988


Q ss_pred             cHHHHHHHHH----HhccCCEEEEE
Q 017426          272 LNKTMSTALG----ATCAGGKVCLV  292 (372)
Q Consensus       272 ~~~~~~~~~~----~l~~~G~~v~~  292 (372)
                      .. .....++    .+.++..++.+
T Consensus        73 a~-~~~~~~~~l~~~~~~~~~Iv~~   96 (167)
T d1ks9a2          73 AW-QVSDAVKSLASTLPVTTPILLI   96 (167)
T ss_dssp             GG-GHHHHHHHHHTTSCTTSCEEEE
T ss_pred             cc-chHHHHHhhccccCcccEEeec
Confidence            75 3333333    44455556655

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.19  E-value=0.32  Score=36.78  Aligned_cols=90  Identities=14%  Similarity=0.142  Sum_probs=62.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCC
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  271 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  271 (372)
                      +|-++|.|.+|...+.-+...|+ .|.+.++++++.+.+...+....       .+..+    ..    ...|+++-++.
T Consensus         3 kIg~IGlG~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~-------~~~~e----~~----~~~diii~~v~   66 (162)
T d3cuma2           3 QIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGASAA-------RSARD----AV----QGADVVISMLP   66 (162)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEEC-------SSHHH----HH----TSCSEEEECCS
T ss_pred             EEEEEEEHHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhhcccc-------chhhh----hc----cccCeeeeccc
Confidence            68889999999988887788898 68899999999998888876432       11111    21    46788888888


Q ss_pred             cHHHHHHH-------HHHhccCCEEEEEcCCCC
Q 017426          272 LNKTMSTA-------LGATCAGGKVCLVGMGHH  297 (372)
Q Consensus       272 ~~~~~~~~-------~~~l~~~G~~v~~g~~~~  297 (372)
                      .....+..       ...+.++-.++.++...+
T Consensus        67 ~~~~~~~v~~~~~~~~~~l~~g~iiid~st~~p   99 (162)
T d3cuma2          67 ASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAP   99 (162)
T ss_dssp             CHHHHHHHHHSTTCHHHHSCTTCEEEECSCCCH
T ss_pred             chhhHHHHHhccccccccCCCCCEEEECCCCCH
Confidence            76554443       334556666666654443

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.13  E-value=0.22  Score=41.76  Aligned_cols=77  Identities=19%  Similarity=0.197  Sum_probs=42.5

Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEE--EecChhHH----HHHHHhCC---C-eEEecCCCcccHHHHHHHHHH-HcC
Q 017426          193 VLIMGA-GPIGLVTMLAARAFGAPRIVI--VDVDDYRL----SVAKEIGA---D-NIVKVSTNLQDIAEEVEKIQK-AMG  260 (372)
Q Consensus       193 vlI~Ga-g~~G~~ai~l~~~~g~~~vv~--v~~~~~~~----~~~~~lg~---~-~v~~~~~~~~~~~~~~~~~~~-~~~  260 (372)
                      |||+|+ +++|.+++..+...|++.+.+  +.++.++.    +.++++..   . ..+..|-.+.+-   +.++.+ ...
T Consensus         5 vlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~---~~~~~~~~~~   81 (285)
T d1jtva_           5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKS---VAAARERVTE   81 (285)
T ss_dssp             EEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHH---HHHHHHTCTT
T ss_pred             EEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHh---hhhhhhhccc
Confidence            466787 999999999999999864333  33333332    23344332   1 122233322222   222221 124


Q ss_pred             CcceEEEeCCCc
Q 017426          261 TGIDVSFDCAGL  272 (372)
Q Consensus       261 ~~~d~vid~~g~  272 (372)
                      +.+|+++++.|.
T Consensus        82 g~idilvnnag~   93 (285)
T d1jtva_          82 GRVDVLVCNAGL   93 (285)
T ss_dssp             SCCSEEEECCCC
T ss_pred             cchhhhhhcccc
Confidence            689999998765

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.05  E-value=0.33  Score=36.32  Aligned_cols=96  Identities=20%  Similarity=0.224  Sum_probs=61.0

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEecChh---HHHHHHHhCCCeEEecCCCcccHHHHHHHHH--------
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAF--GAPRIVIVDVDDY---RLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ--------  256 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~--g~~~vv~v~~~~~---~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~--------  256 (372)
                      .+|.|.|+ |.+|..+.++.+..  .+ .|++..+...   -.+.++++.+..+...+...   .+.+....        
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~---~~~l~~~~~~~~~~v~   78 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTANRNVKDLADAAKRTNAKRAVIADPSL---YNDLKEALAGSSVEAA   78 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEESSCHHHHHHHHHHTTCSEEEESCGGG---HHHHHHHTTTCSSEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeCCCHHHHHHHHHhhccccceeccHHH---HHHHHHHhhhcccccc
Confidence            68999998 99999999999875  46 4565555443   24456678888776543221   11111110        


Q ss_pred             -------HHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEE
Q 017426          257 -------KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVC  290 (372)
Q Consensus       257 -------~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v  290 (372)
                             +.....+|+++.++.+...+.-.+..++.+-++.
T Consensus        79 ~g~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~ia  119 (150)
T d1r0ka2          79 AGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVA  119 (150)
T ss_dssp             ESHHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEE
T ss_pred             cCccchheecccccceeeeecCchhHHHHHHHHHhcCCEEE
Confidence                   0013468888888776667777777777665543

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=94.00  E-value=0.092  Score=44.82  Aligned_cols=75  Identities=21%  Similarity=0.262  Sum_probs=44.7

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEec-----ChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcce
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV-----DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~-----~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d  264 (372)
                      .+|||+|+ |-+|..+++.+...|. .|++++.     ..++.+.+...+--.++..+-.+.   +.+.+..+  +.++|
T Consensus         1 ~KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~---~~l~~~~~--~~~~d   74 (338)
T d1orra_           1 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK---NDVTRLIT--KYMPD   74 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCH---HHHHHHHH--HHCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhccCCcEEEEcccCCH---HHHHHHHH--hcCCc
Confidence            37999998 9999999999988898 4677642     112333444444333333332221   12333222  24689


Q ss_pred             EEEeCCC
Q 017426          265 VSFDCAG  271 (372)
Q Consensus       265 ~vid~~g  271 (372)
                      +||.+.+
T Consensus        75 ~Vih~aa   81 (338)
T d1orra_          75 SCFHLAG   81 (338)
T ss_dssp             EEEECCC
T ss_pred             eEEeecc
Confidence            9998765

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.92  E-value=0.54  Score=40.61  Aligned_cols=111  Identities=19%  Similarity=0.332  Sum_probs=72.5

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE--ecChhHHHHHHHhCCCeEEec-------------------
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKEIGADNIVKV-------------------  241 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v--~~~~~~~~~~~~lg~~~v~~~-------------------  241 (372)
                      +...++++..|+...+|..|.+++..|+.+|.+.++++  ..+++|.+.++.+|+.-+...                   
T Consensus        90 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~~  169 (355)
T d1jbqa_          90 RDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLK  169 (355)
T ss_dssp             HHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHH
T ss_pred             HcCCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHHH
Confidence            44666777776666779999999999999999766666  445578888999998754311                   


Q ss_pred             ---------CC--CcccHH----HHHHHHHHHcCCcceEEEeCCCcHHHHHH---HHHHhccCCEEEEEc
Q 017426          242 ---------ST--NLQDIA----EEVEKIQKAMGTGIDVSFDCAGLNKTMST---ALGATCAGGKVCLVG  293 (372)
Q Consensus       242 ---------~~--~~~~~~----~~~~~~~~~~~~~~d~vid~~g~~~~~~~---~~~~l~~~G~~v~~g  293 (372)
                               ..  +..+..    ....++.++.+..+|.+|.++|+...+.-   .++...+.-+++.+.
T Consensus       170 ~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~ve  239 (355)
T d1jbqa_         170 NEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVD  239 (355)
T ss_dssp             HHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             HhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCcceEEeec
Confidence                     00  011111    11234444445678999999988655554   344455677777764

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.87  E-value=0.31  Score=37.66  Aligned_cols=91  Identities=15%  Similarity=0.039  Sum_probs=60.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCeEEEEecChhHHH-HHHHhCCCeE-EecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          192 NVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLS-VAKEIGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~v-~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      ++.|.|+|.+|...++.++.. +++.+.+.+.++++.+ +.++++.... ..+    .+    ++++.+  ...+|+|+-
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~----~~----~~~ll~--~~~iD~v~I   72 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIH----GS----YESLLE--DPEIDALYV   72 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEE----SS----HHHHHH--CTTCCEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeec----Cc----HHHhhh--ccccceeee
Confidence            678899999999888888776 5644445577776644 4566774321 112    23    333332  357999999


Q ss_pred             CCCcHHHHHHHHHHhccCCEEEEEc
Q 017426          269 CAGLNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ++....+.+.+..++.. |.-+.+.
T Consensus        73 ~tp~~~h~~~~~~~l~~-g~~v~~E   96 (184)
T d1ydwa1          73 PLPTSLHVEWAIKAAEK-GKHILLE   96 (184)
T ss_dssp             CCCGGGHHHHHHHHHTT-TCEEEEC
T ss_pred             cccchhhcchhhhhhhc-cceeecc
Confidence            99987788888888885 5666664

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=93.73  E-value=0.093  Score=44.97  Aligned_cols=100  Identities=18%  Similarity=0.134  Sum_probs=60.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHHHcCCcc
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      .+|++||=.++|. |.+++++++  |+..|++++.+++..+.+++    .|.+.+....   .+..+.++.+.. .+..|
T Consensus       144 ~~g~rVLDl~~gt-G~~s~~~a~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~---~d~~~~~~~~~~-~~~~f  216 (318)
T d1wxxa2         144 FRGERALDVFSYA-GGFALHLAL--GFREVVAVDSSAEALRRAEENARLNGLGNVRVLE---ANAFDLLRRLEK-EGERF  216 (318)
T ss_dssp             CCEEEEEEETCTT-THHHHHHHH--HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEE---SCHHHHHHHHHH-TTCCE
T ss_pred             hCCCeeeccCCCC-cHHHHHHHh--cCCcEEeecchHHHHHHHHHHHHHcCCCCcceee---ccHHHHhhhhHh-hhcCC
Confidence            3688988776532 334455554  34479999999998877654    4554332221   333333443332 35689


Q ss_pred             eEEEeCCC-----c----------HHHHHHHHHHhccCCEEEEEcC
Q 017426          264 DVSFDCAG-----L----------NKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       264 d~vid~~g-----~----------~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      |+|+--..     .          ...+..+++.|+|+|.++...-
T Consensus       217 D~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~sc  262 (318)
T d1wxxa2         217 DLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC  262 (318)
T ss_dssp             EEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             CEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence            99984211     1          0245567888999999887754

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=93.69  E-value=0.16  Score=38.81  Aligned_cols=130  Identities=14%  Similarity=0.113  Sum_probs=73.3

Q ss_pred             EEEEECCCHHHHH-HHHHHHHcCCCeEEEEecChhHHHH-HHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          192 NVLIMGAGPIGLV-TMLAARAFGAPRIVIVDVDDYRLSV-AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       192 ~vlI~Gag~~G~~-ai~l~~~~g~~~vv~v~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      +|.|+|+|.+|.. .+...+..+--.+++++.++++.+. .+.++.....  .    ++.+    +.   ...+|+|+-+
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~--~----~~~~----ll---~~~iD~V~I~   69 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATC--T----DYRD----VL---QYGVDAVMIH   69 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCC--S----STTG----GG---GGCCSEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhccccccc--c----cHHH----hc---ccccceeccc
Confidence            6789999999964 5666665533245677788776654 4667765432  1    2211    21   2369999999


Q ss_pred             CCcHHHHHHHHHHhccCCEEEEEcCCCCCccccchh---h-hccCc-EEEeeccCCCcHHHHHHHHHcCCC
Q 017426          270 AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP---A-AVREV-DVVGVFRYKNTWPLCLELLRSGKI  335 (372)
Q Consensus       270 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~---~-~~~~~-~i~~~~~~~~~~~~~~~ll~~g~~  335 (372)
                      +....+.+.+..++.. |.-+.+.-......-....   . -.++. -..+...+...+.++.+.+..|++
T Consensus        70 tp~~~H~~~~~~al~~-gk~V~~EKP~~~~~~e~~~l~~~a~~~~~~~~vg~~r~~~~~~~~~~~~~~G~i  139 (167)
T d1xeaa1          70 AATDVHSTLAAFFLHL-GIPTFVDKPLAASAQECENLYELAEKHHQPLYVGFNGFDAMVQDWLQVAAAGKL  139 (167)
T ss_dssp             SCGGGHHHHHHHHHHT-TCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEECGTHHHHHHHHHHHHHHTCC
T ss_pred             cccccccccccccccc-ccccccCCCCcCCHHHHHHHHHHHHHcCCEEEEEeCcCCHHHHHHHHHhhcCCC
Confidence            9887777788888885 5556664221111111111   1 11222 222332223445677777777776

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.64  E-value=0.13  Score=38.72  Aligned_cols=84  Identities=10%  Similarity=0.094  Sum_probs=58.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCC
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  270 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  270 (372)
                      +|.+.|+|.+|.+.+.-....|. .+++.++++++.+.+ +++|....       .+..+    ..    ...|+||=|+
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~g~~~~-------~~~~~----~~----~~~dvIilav   65 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPYA-------MSHQD----LI----DQVDLVILGI   65 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCBC-------SSHHH----HH----HTCSEEEECS
T ss_pred             EEEEEeccHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhccccceeee-------chhhh----hh----hccceeeeec
Confidence            57788999999998886666676 578888888876654 67786532       12222    21    3689999888


Q ss_pred             CcHHHHHHHHHHhccCCEEEEE
Q 017426          271 GLNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       271 g~~~~~~~~~~~l~~~G~~v~~  292 (372)
                      - +..+...+..+.++..++.+
T Consensus        66 k-p~~~~~vl~~l~~~~~iis~   86 (152)
T d2ahra2          66 K-PQLFETVLKPLHFKQPIISM   86 (152)
T ss_dssp             C-GGGHHHHHTTSCCCSCEEEC
T ss_pred             c-hHhHHHHhhhcccceeEecc
Confidence            6 44667777777776666544

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=93.59  E-value=0.31  Score=37.35  Aligned_cols=100  Identities=18%  Similarity=0.158  Sum_probs=60.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHcC-CCeEEEEecCh-hHHHHHHHhCCCeEEecCCCcccHHH-------HHHHHHHHcCCc
Q 017426          192 NVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDD-YRLSVAKEIGADNIVKVSTNLQDIAE-------EVEKIQKAMGTG  262 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~-------~~~~~~~~~~~~  262 (372)
                      +|.|.|-|-+|+.+.+.+...+ .+.+.+.+.++ .....+..++.+......+....+.+       .+..+    ..+
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~----~~~   78 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDM----LDE   78 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHH----HHT
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHh----hcC
Confidence            6889999999999998876654 54333334433 34455556665543321111000110       01111    147


Q ss_pred             ceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCC
Q 017426          263 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG  295 (372)
Q Consensus       263 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  295 (372)
                      +|+|+||+|.-.....+-.++..+-+++..+..
T Consensus        79 vDvViEcTG~f~~~~~~~~hl~~G~K~vi~~~~  111 (171)
T d1cf2o1          79 ADIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGE  111 (171)
T ss_dssp             CSEEEECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred             CCEEEEccCCCCCHHHHHHHHHcCCCEEEECCC
Confidence            999999999877777888889887777766543

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=93.31  E-value=0.19  Score=43.14  Aligned_cols=74  Identities=26%  Similarity=0.369  Sum_probs=43.5

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEec----ChhHHHHHHHhCCC--eEEecCCCcccHHHHHHHHHHHcCCcce
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV----DDYRLSVAKEIGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~----~~~~~~~~~~lg~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~d  264 (372)
                      +|||+|+ |-+|+.++..+...|.+ |+++++    ........+.+..+  ..+..|-.  +. +.+.+..+  ..++|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--d~-~~l~~~~~--~~~~d   75 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHD-VIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR--NE-ALMTEILH--DHAID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTT--CH-HHHHHHHH--HTTCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCE-EEEEECCCCcchhhHHHHHhhcCCCCEEEEeecC--CH-HHHHHHHh--ccCCC
Confidence            6999998 99999999999999984 666643    22333333333221  12222222  22 22333322  25799


Q ss_pred             EEEeCCC
Q 017426          265 VSFDCAG  271 (372)
Q Consensus       265 ~vid~~g  271 (372)
                      +||.+++
T Consensus        76 ~ViHlAa   82 (338)
T d1udca_          76 TVIHFAG   82 (338)
T ss_dssp             EEEECCS
T ss_pred             EEEECCC
Confidence            9999764

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.28  E-value=0.026  Score=46.12  Aligned_cols=75  Identities=20%  Similarity=0.337  Sum_probs=44.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      +.+|||+|| |.+|..+++.+...|. ..|+++.+++.+......-.... ...+-  .+.. .+.+.    -.++|++|
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~-~~~D~--~~~~-~~~~~----~~~~d~vi   85 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQ-EVVDF--EKLD-DYASA----FQGHDVGF   85 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEE-EECCG--GGGG-GGGGG----GSSCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeee-eeecc--cccc-ccccc----cccccccc
Confidence            468999998 9999999998887774 46777777554322111111221 11111  1111 11111    25799999


Q ss_pred             eCCCc
Q 017426          268 DCAGL  272 (372)
Q Consensus       268 d~~g~  272 (372)
                      .++|.
T Consensus        86 ~~~~~   90 (232)
T d2bkaa1          86 CCLGT   90 (232)
T ss_dssp             ECCCC
T ss_pred             ccccc
Confidence            99875

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.25  E-value=0.37  Score=34.95  Aligned_cols=30  Identities=23%  Similarity=0.237  Sum_probs=24.7

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEe
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVD  221 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~  221 (372)
                      +|.|+|+ |-+|++..+++...+.+.+..++
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id   32 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVD   32 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEEC
Confidence            6889997 99999999999999986544444

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.08  E-value=0.38  Score=37.56  Aligned_cols=93  Identities=19%  Similarity=0.227  Sum_probs=60.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeE--EecCCCcccHHHHHHHHHHHcC
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNI--VKVSTNLQDIAEEVEKIQKAMG  260 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v--~~~~~~~~~~~~~~~~~~~~~~  260 (372)
                      +++| +||=+|+| .|..+..+++ .|+ .|++++.+++..+.+++    .+.+.+  ...+.....           ..
T Consensus        29 ~~~g-rvLDiGcG-~G~~~~~la~-~g~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~-----------~~   93 (198)
T d2i6ga1          29 VAPG-RTLDLGCG-NGRNSLYLAA-NGY-DVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT-----------FD   93 (198)
T ss_dssp             SCSC-EEEEETCT-TSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC-----------CC
T ss_pred             CCCC-cEEEECCC-CCHHHHHHHH-Hhh-hhccccCcHHHHHHHHHHhhhccccchhhhheeccccc-----------cc
Confidence            4554 89889986 5787777776 477 68999999987776543    444432  222211111           13


Q ss_pred             CcceEEEeCC-----Cc---HHHHHHHHHHhccCCEEEEEcC
Q 017426          261 TGIDVSFDCA-----GL---NKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       261 ~~~d~vid~~-----g~---~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      ..||+|+...     ..   ...+..+.+.|+++|.++....
T Consensus        94 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~  135 (198)
T d2i6ga1          94 GEYDFILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAA  135 (198)
T ss_dssp             CCEEEEEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             ccccEEEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            6799998632     11   1356678888999999887643

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.08  E-value=0.24  Score=35.57  Aligned_cols=67  Identities=25%  Similarity=0.504  Sum_probs=46.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      ++++.+++|.|+|.+|.=++..++.+|. .|..++++++-.      +       ...+++..+.+.+..+  ..++++.
T Consensus        27 ~~~~~~vvIIGgG~iG~E~A~~l~~~g~-~Vtli~~~~~~l------~-------~~~~~~~~~~~~~~l~--~~GV~i~   90 (121)
T d1d7ya2          27 LRPQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQPRLM------S-------RAAPATLADFVARYHA--AQGVDLR   90 (121)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSSTT------T-------TTSCHHHHHHHHHHHH--TTTCEEE
T ss_pred             hhcCCeEEEECcchhHHHHHHHhhcccc-eEEEEeeccccc------c-------ccCCHHHHHHHHHHHH--HCCcEEE
Confidence            4567899999999999999999999998 577776655311      1       0112445555555544  4678888


Q ss_pred             EeC
Q 017426          267 FDC  269 (372)
Q Consensus       267 id~  269 (372)
                      +++
T Consensus        91 ~~~   93 (121)
T d1d7ya2          91 FER   93 (121)
T ss_dssp             ESC
T ss_pred             eCC
Confidence            764

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=92.96  E-value=0.5  Score=37.99  Aligned_cols=101  Identities=15%  Similarity=0.178  Sum_probs=66.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHHH--cCC
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKA--MGT  261 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~~--~~~  261 (372)
                      ...+||-+|. .+|..++.+|+.+. -..++.++.+++..+.+++    .|...-+..  ...+..+.+.++...  ..+
T Consensus        59 ~~k~iLEiGT-~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~--~~g~a~~~L~~l~~~~~~~~  135 (227)
T d1susa1          59 NAKNTMEIGV-YTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDF--REGPALPVLDEMIKDEKNHG  135 (227)
T ss_dssp             TCCEEEEECC-GGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEE--EESCHHHHHHHHHHCGGGTT
T ss_pred             CCCcEEEecc-hhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceee--eehHHHHHHHHHHhccccCC
Confidence            4579999985 35788888888763 1378999999988776654    465432222  124555556665432  245


Q ss_pred             cceEEE-eCCCc--HHHHHHHHHHhccCCEEEEE
Q 017426          262 GIDVSF-DCAGL--NKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       262 ~~d~vi-d~~g~--~~~~~~~~~~l~~~G~~v~~  292 (372)
                      .||.|| |+--.  ...++.+++.|+++|.++.=
T Consensus       136 ~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~D  169 (227)
T d1susa1         136 SYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD  169 (227)
T ss_dssp             CBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred             ceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEc
Confidence            799998 43322  35677899999999987764

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=92.95  E-value=0.1  Score=43.32  Aligned_cols=95  Identities=18%  Similarity=0.241  Sum_probs=59.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCe-EEecCCCcccHHHHHHHHHHHcCC
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADN-IVKVSTNLQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-v~~~~~~~~~~~~~~~~~~~~~~~  261 (372)
                      +++|++||-.+|| +|.+++.+|+. |...|++++.+++..+.+++    .+... +..+..+..++       .  ...
T Consensus       105 ~~~g~~VlD~~aG-~G~~~l~~a~~-~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~-------~--~~~  173 (260)
T d2frna1         105 AKPDELVVDMFAG-IGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF-------P--GEN  173 (260)
T ss_dssp             CCTTCEEEETTCT-TTTTHHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC-------C--CCS
T ss_pred             cCCccEEEECcce-EcHHHHHHHHh-CCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHh-------c--cCC
Confidence            6899999998653 35555566665 54479999999998887754    34432 22222211111       1  245


Q ss_pred             cceEEE-eC-CCcHHHHHHHHHHhccCCEEEEE
Q 017426          262 GIDVSF-DC-AGLNKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       262 ~~d~vi-d~-~g~~~~~~~~~~~l~~~G~~v~~  292 (372)
                      .+|.|+ +. ..+...+..++..++++|.+...
T Consensus       174 ~~D~Ii~~~p~~~~~~l~~a~~~l~~gG~lh~~  206 (260)
T d2frna1         174 IADRILMGYVVRTHEFIPKALSIAKDGAIIHYH  206 (260)
T ss_dssp             CEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEE
T ss_pred             CCCEEEECCCCchHHHHHHHHhhcCCCCEEEEE
Confidence            689665 43 23345677889999998876544

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=92.95  E-value=0.21  Score=38.63  Aligned_cols=99  Identities=17%  Similarity=0.104  Sum_probs=56.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCeEEEEecCh-hHHHHHHHhCCCeEEecCCCcccHHH-------HHHHHHHHcCCc
Q 017426          192 NVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDD-YRLSVAKEIGADNIVKVSTNLQDIAE-------EVEKIQKAMGTG  262 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~-g~~~vv~v~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~-------~~~~~~~~~~~~  262 (372)
                      +|.|.|.|-+|+.+.+.+... ..+.|.+.+..+ .....+...+.......+. ...+.+       .+...    ..+
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~g~~~~~----~~~   77 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQS-IKKFEESGIPVAGTVEDL----IKT   77 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGG-HHHHHTTTCCCCCCHHHH----HHH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCcc-ceeccccceecCCchhhh----hhc
Confidence            688999999999999998865 454333334433 3333444444322211000 000000       01111    136


Q ss_pred             ceEEEeCCCcHHHHHHHHHHhccCCEEEEEcCC
Q 017426          263 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG  295 (372)
Q Consensus       263 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  295 (372)
                      +|+|+||+|.....+.+-.++..+-+++..+..
T Consensus        78 vDiViecTG~f~~~e~a~~hl~~G~KvIi~~~~  110 (178)
T d1b7go1          78 SDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGE  110 (178)
T ss_dssp             CSEEEECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred             CCEEEECCCCcCCHHHHHHHHHcCCEEEEECCC
Confidence            899999999876777777788766676665443

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=92.92  E-value=0.15  Score=36.46  Aligned_cols=43  Identities=16%  Similarity=0.227  Sum_probs=34.6

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       181 ~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      .++.....++.+++|.|+|.+|+=+++.++.+|. .+..+.+.+
T Consensus        13 ~~~~l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~-~vt~i~~~~   55 (121)
T d1mo9a2          13 LVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGR-RTVMLVRTE   55 (121)
T ss_dssp             HHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred             HHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcch-hheEeeccc
Confidence            3455666789999999999999999999999998 566666543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=92.92  E-value=0.041  Score=47.71  Aligned_cols=36  Identities=19%  Similarity=0.160  Sum_probs=30.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChh
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY  225 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~  225 (372)
                      .+.+|||+|+ |-+|..+++.+...|. .|+++++++.
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~   43 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAP   43 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCC
Confidence            4689999998 9999999999999999 5777777654

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.91  E-value=0.15  Score=43.39  Aligned_cols=103  Identities=20%  Similarity=0.298  Sum_probs=56.6

Q ss_pred             HHH-HHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHH---HHHhCC-CeEEecCCCcccHHHH
Q 017426          178 GVH-ACRR-ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV---AKEIGA-DNIVKVSTNLQDIAEE  251 (372)
Q Consensus       178 a~~-~l~~-~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~---~~~lg~-~~v~~~~~~~~~~~~~  251 (372)
                      +|. ++.. ..+.+|++||-+|+| .|..++.+|+ .|++.|++++.++.-...   .++.+. +.+........++   
T Consensus        22 ~y~~ai~~~~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l---   96 (311)
T d2fyta1          22 SYRDFIYQNPHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEV---   96 (311)
T ss_dssp             HHHHHHHHCGGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTS---
T ss_pred             HHHHHHHhccccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHh---
Confidence            443 3443 456689999999876 4555555544 588889999998864332   233342 2221111111111   


Q ss_pred             HHHHHHHcCCcceEEEeC-CC----cH----HHHHHHHHHhccCCEEE
Q 017426          252 VEKIQKAMGTGIDVSFDC-AG----LN----KTMSTALGATCAGGKVC  290 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~-~g----~~----~~~~~~~~~l~~~G~~v  290 (372)
                          . .....+|+|+.- .+    .+    ..+...-+.|+|+|+++
T Consensus        97 ----~-~~~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1          97 ----H-LPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             ----C-CSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             ----c-CccccceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence                0 123689999852 11    11    12223345799999876

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.78  E-value=0.41  Score=39.77  Aligned_cols=96  Identities=19%  Similarity=0.249  Sum_probs=60.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC-C-------------eEEecCCCcccHHHHHH
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA-D-------------NIVKVSTNLQDIAEEVE  253 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~-~-------------~v~~~~~~~~~~~~~~~  253 (372)
                      ....+|||+|+|. |..+-.+++. +...+.+++.+++-.+.++++-. .             .+...   ..|..+.++
T Consensus        71 ~~p~~vLiiG~G~-G~~~~~~l~~-~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~---~~Da~~~l~  145 (276)
T d1mjfa_          71 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLT---IGDGFEFIK  145 (276)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEE---ESCHHHHHH
T ss_pred             CCCceEEEecCCc-hHHHHHHHHh-CCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEE---EChHHHHHh
Confidence            4567999997643 3444455554 45678999999999988887431 1             01111   133333332


Q ss_pred             HHHHHcCCcceEEE-eCCCc---------HHHHHHHHHHhccCCEEEEEc
Q 017426          254 KIQKAMGTGIDVSF-DCAGL---------NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       254 ~~~~~~~~~~d~vi-d~~g~---------~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      +     ...+|+|| |....         .+-++.+.+.|+++|.++...
T Consensus       146 ~-----~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~  190 (276)
T d1mjfa_         146 N-----NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  190 (276)
T ss_dssp             H-----CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             c-----cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence            2     46899997 43321         234777889999999988765

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.78  E-value=0.066  Score=44.00  Aligned_cols=35  Identities=17%  Similarity=0.323  Sum_probs=30.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      ..++|+|+|+|..|++++..++..|. .|++.++++
T Consensus         3 ~~~kV~IiGaG~aGl~~A~~L~~~G~-~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            46799999999999999999999999 688887643

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.77  E-value=0.29  Score=40.18  Aligned_cols=81  Identities=12%  Similarity=0.133  Sum_probs=46.2

Q ss_pred             CCEEEEECC-CHHHHHHHHH-HHH--cCCCeEEEEecChhHHHHH-HHh---C-CCeE--EecCCCccc-HHHHHHHHHH
Q 017426          190 ETNVLIMGA-GPIGLVTMLA-ARA--FGAPRIVIVDVDDYRLSVA-KEI---G-ADNI--VKVSTNLQD-IAEEVEKIQK  257 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l-~~~--~g~~~vv~v~~~~~~~~~~-~~l---g-~~~v--~~~~~~~~~-~~~~~~~~~~  257 (372)
                      |+.+||+|+ +++|.++++. |+.  .|+ .|+.+++++++.+.+ +++   + -..+  +..|-.+++ ..+.+..+.+
T Consensus         6 gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~   84 (259)
T d1oaaa_           6 CAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            556777887 9999987765 442  688 688888888876644 333   2 1122  223333332 2333333322


Q ss_pred             H---cCCcceEEEeCCC
Q 017426          258 A---MGTGIDVSFDCAG  271 (372)
Q Consensus       258 ~---~~~~~d~vid~~g  271 (372)
                      .   .+...|+++++.|
T Consensus        85 ~~~~~~~~~~~lvnnag  101 (259)
T d1oaaa_          85 LPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             SCCCTTCCEEEEEECCC
T ss_pred             hhhhccCceEEEEeccc
Confidence            1   2346788888655

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=92.67  E-value=0.71  Score=34.75  Aligned_cols=102  Identities=22%  Similarity=0.201  Sum_probs=70.1

Q ss_pred             HHHHHHHh-cC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHH
Q 017426          177 VGVHACRR-AN-IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       177 ~a~~~l~~-~~-~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~  254 (372)
                      +.+.++.+ .+ .=.|.+++|.|=|-+|.-.++-++.+|+ +|++++.++-+.-.+.--|. .+.       +    +.+
T Consensus         8 S~~d~i~r~t~~~laGk~vvV~GYG~vGrG~A~~~rg~Ga-~V~V~E~DPi~alqA~mdGf-~v~-------~----~~~   74 (163)
T d1v8ba1           8 SLPDGLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGF-NVV-------T----LDE   74 (163)
T ss_dssp             HHHHHHHHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTC-EEC-------C----HHH
T ss_pred             hHHHHHHHHhCceecCCEEEEecccccchhHHHHHHhCCC-EEEEEecCchhhHHHHhcCC-ccC-------c----hhH
Confidence            34555543 33 4689999999999999999999999999 79999998865433332233 221       1    222


Q ss_pred             HHHHcCCcceEEEeCCCcHHH-HHHHHHHhccCCEEEEEcCC
Q 017426          255 IQKAMGTGIDVSFDCAGLNKT-MSTALGATCAGGKVCLVGMG  295 (372)
Q Consensus       255 ~~~~~~~~~d~vid~~g~~~~-~~~~~~~l~~~G~~v~~g~~  295 (372)
                      .    -...|+++-++|..+. -..-++.|+.+..+...|-.
T Consensus        75 a----~~~aDi~vTaTGn~~vI~~~h~~~MKdgaIl~N~GHf  112 (163)
T d1v8ba1          75 I----VDKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHF  112 (163)
T ss_dssp             H----TTTCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSST
T ss_pred             c----cccCcEEEEcCCCCccccHHHHHHhhCCeEEEecccc
Confidence            2    3578999999998643 23456778877666655533

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.67  E-value=0.18  Score=37.70  Aligned_cols=31  Identities=23%  Similarity=0.589  Sum_probs=27.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIV  220 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v  220 (372)
                      .|.+|||.|+|.+|..-+..+...|++ |.++
T Consensus        12 ~gkrvLViGgG~va~~ka~~Ll~~GA~-VtVv   42 (150)
T d1kyqa1          12 KDKRILLIGGGEVGLTRLYKLMPTGCK-LTLV   42 (150)
T ss_dssp             TTCEEEEEEESHHHHHHHHHHGGGTCE-EEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCE-EEEE
Confidence            578999999999999999999999995 5555

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.63  E-value=1.3  Score=32.24  Aligned_cols=76  Identities=20%  Similarity=0.295  Sum_probs=40.4

Q ss_pred             EEEEECC-CHHHHHHHHHHHH-cCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          192 NVLIMGA-GPIGLVTMLAARA-FGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~-~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      +|.|.|+ |-+|+.+++.... .+++.+-.+++.+ .......-+++-+++++.. +...+-++...   ..+.-+|+.+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~~~~~~~~DvvIDFS~p-~~~~~~~~~~~---~~~~~~ViGT   75 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLSLLTDGNTEVVIDFTHP-DVVMGNLEFLI---DNGIHAVVGT   75 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTHHHHTTTCSEEEECCCT-TTHHHHHHHHH---HTTCEEEECC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chhhhccccCCEEEEcccH-HHHHHHHHHHH---hcCCCEEEec
Confidence            6889998 9999999988765 5665444444322 2222222345555554331 22233333322   2445555555


Q ss_pred             CCc
Q 017426          270 AGL  272 (372)
Q Consensus       270 ~g~  272 (372)
                      +|-
T Consensus        76 TG~   78 (135)
T d1yl7a1          76 TGF   78 (135)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            554

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=92.55  E-value=0.16  Score=40.16  Aligned_cols=86  Identities=19%  Similarity=0.189  Sum_probs=54.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .|.+|.|+|.|.+|+.++++++.+|+ +|++.+...+....  ..+..    .    .++.+    +.    ...|+++-
T Consensus        42 ~gk~vgIiG~G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~--~~~~~----~----~~l~~----~l----~~sDii~~  102 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPELE--KKGYY----V----DSLDD----LY----KQADVISL  102 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHH--HTTCB----C----SCHHH----HH----HHCSEEEE
T ss_pred             cCCeEEEecccccchhHHHhHhhhcc-cccccCcccccccc--cceee----e----ccccc----cc----cccccccc
Confidence            47899999999999999999999999 57887765443222  21211    1    12222    22    24688877


Q ss_pred             CCCcHHH----H-HHHHHHhccCCEEEEEc
Q 017426          269 CAGLNKT----M-STALGATCAGGKVCLVG  293 (372)
Q Consensus       269 ~~g~~~~----~-~~~~~~l~~~G~~v~~g  293 (372)
                      +......    + ...++.|+++..++-.+
T Consensus       103 ~~plt~~T~~li~~~~l~~mk~~a~lIN~s  132 (197)
T d1j4aa1         103 HVPDVPANVHMINDESIAKMKQDVVIVNVS  132 (197)
T ss_dssp             CSCCCGGGTTCBSHHHHHHSCTTEEEEECS
T ss_pred             cCCccccccccccHHHHhhhCCccEEEecC
Confidence            6543211    1 24567787777666654

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=92.54  E-value=0.11  Score=36.93  Aligned_cols=38  Identities=24%  Similarity=0.510  Sum_probs=31.2

Q ss_pred             CCC-CEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhH
Q 017426          188 GPE-TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYR  226 (372)
Q Consensus       188 ~~g-~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~  226 (372)
                      .|+ .+|.|+|+|.+|++.++-|+.+|+ .+++.+.+++.
T Consensus         8 ~~~~~kigIlGgGQL~rMla~aA~~lG~-~v~v~d~~~~~   46 (111)
T d1kjqa2           8 RPAATRVMLLGSGELGKEVAIECQRLGV-EVIAVDRYADA   46 (111)
T ss_dssp             STTCCEEEEESCSHHHHHHHHHHHTTTC-EEEEEESSTTC
T ss_pred             CCCCCEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcCCCCC
Confidence            344 469999999999999999999999 57777776553

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=92.49  E-value=0.16  Score=42.27  Aligned_cols=36  Identities=17%  Similarity=0.101  Sum_probs=26.4

Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHH
Q 017426          193 VLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS  228 (372)
Q Consensus       193 vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~  228 (372)
                      +||+|+ +++|.++++.+...|+++++...+++++.+
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~   41 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEAN   41 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHH
Confidence            467787 999999999999999954444455555444

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.40  E-value=0.15  Score=40.13  Aligned_cols=39  Identities=28%  Similarity=0.409  Sum_probs=33.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHH
Q 017426          191 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA  230 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~  230 (372)
                      .+|.|.|+|.+|..+++++...|. .|+..+.+++..+.+
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCC-cEEEEECChHHHHHH
Confidence            489999999999999999999999 689999998765543

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.30  E-value=0.2  Score=43.87  Aligned_cols=31  Identities=29%  Similarity=0.453  Sum_probs=26.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD  221 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~  221 (372)
                      |.+|||+|+ |-+|..++..+...|. .|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEe
Confidence            679999998 9999999999999998 578876

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=92.28  E-value=0.71  Score=35.42  Aligned_cols=131  Identities=11%  Similarity=0.043  Sum_probs=76.1

Q ss_pred             EEEEECCCHHHHH-HHHHHHHcC--CCeEEEEecChhHHH-HHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          192 NVLIMGAGPIGLV-TMLAARAFG--APRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       192 ~vlI~Gag~~G~~-ai~l~~~~g--~~~vv~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      ++.|+|+|.+|.- .+...+..+  ++.+.+.++++++.+ +.+.++...+.      .++.+    +.+  ...+|+|+
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~------~~~~e----ll~--~~~id~v~   72 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF------DSYEE----LLE--SGLVDAVD   72 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE------SCHHH----HHH--SSCCSEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccccccee------eeeec----ccc--ccccceee
Confidence            6889999999964 466666543  333445577776655 45678866543      23333    332  35799999


Q ss_pred             eCCCcHHHHHHHHHHhccCCEEEEEcCCCCCccccch---hhh-ccCcEE-Eeecc-C---CCcHHHHHHHHHcCCC
Q 017426          268 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT---PAA-VREVDV-VGVFR-Y---KNTWPLCLELLRSGKI  335 (372)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~~-~~~~~i-~~~~~-~---~~~~~~~~~ll~~g~~  335 (372)
                      -++....+...+...+.. |.-+.+.-......-...   .+. .++..+ .+... +   ...+.++.+++++|.+
T Consensus        73 I~tp~~~h~~~~~~al~~-gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v~~~~R~~~~~~~~~~~~~~i~~G~i  148 (181)
T d1zh8a1          73 LTLPVELNLPFIEKALRK-GVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRENSYQKEFEDFYQVVAEGKP  148 (181)
T ss_dssp             ECCCGGGHHHHHHHHHHT-TCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGCCHHHHHHHHHHHHHHSCCC
T ss_pred             cccccccccccccccccc-chhhhcCCCCcCCHHHHHHHHHHHHHhCCeEEEEeeccccccCHHHHHHHHHHHCCCC
Confidence            998877677777777774 566666432111111111   111 122222 22221 1   3457788889999887

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.21  E-value=0.83  Score=33.88  Aligned_cols=39  Identities=28%  Similarity=0.512  Sum_probs=31.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhH
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYR  226 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~  226 (372)
                      ..+.+|.|.|+|.+|...+..+...+ +..++..+.++++
T Consensus         4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            34678999999999999888887766 3568889988876

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=92.18  E-value=0.5  Score=40.14  Aligned_cols=101  Identities=14%  Similarity=0.074  Sum_probs=62.5

Q ss_pred             cCCCCCCEEEEECC--CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCC--CeEEecCCCcccHHHHHHHHH
Q 017426          185 ANIGPETNVLIMGA--GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGA--DNIVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       185 ~~~~~g~~vlI~Ga--g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~--~~v~~~~~~~~~~~~~~~~~~  256 (372)
                      ..+.+|++||=..+  |+.+..   . ...|+..|+.++.++...+.+++    -|.  ..+..+   ..|.-+.++.+.
T Consensus       140 ~~~~~g~~VLdlf~~~G~~sl~---a-a~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i---~~d~~~~l~~~~  212 (317)
T d2b78a2         140 NGSAAGKTVLNLFSYTAAFSVA---A-AMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLV---VMDVFDYFKYAR  212 (317)
T ss_dssp             HTTTBTCEEEEETCTTTHHHHH---H-HHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEE---ESCHHHHHHHHH
T ss_pred             HHhhCCCceeecCCCCcHHHHH---H-HhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEE---EccHHHHHHHHH
Confidence            34678999988743  555543   2 34688789999999988877654    222  222111   134444455443


Q ss_pred             HHcCCcceEEEeCCC---------------cHHHHHHHHHHhccCCEEEEEc
Q 017426          257 KAMGTGIDVSFDCAG---------------LNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       257 ~~~~~~~d~vid~~g---------------~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      + .+..||+||---.               -.+.+..++++|+|+|.++.+.
T Consensus       213 ~-~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~s  263 (317)
T d2b78a2         213 R-HHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIAST  263 (317)
T ss_dssp             H-TTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             h-hcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence            3 2568999984211               0135667888999999988765

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=92.17  E-value=1.8  Score=35.88  Aligned_cols=111  Identities=15%  Similarity=0.182  Sum_probs=69.8

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE--ecChhHHHHHHHhCCCeEEecCC-----------------
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKEIGADNIVKVST-----------------  243 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v--~~~~~~~~~~~~lg~~~v~~~~~-----------------  243 (372)
                      +...++++.+|....+|..|++++..|+.+|.+.++++  ..++.+.+.++.+|+.-++....                 
T Consensus        53 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~~  132 (292)
T d2bhsa1          53 KRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRG  132 (292)
T ss_dssp             HTTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHHT
T ss_pred             HhCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhccccc
Confidence            44556666666666779999999999999999766666  33567788899999874432111                 


Q ss_pred             ---------CcccHHH----HHHHHHHHcCCcceEEEeCCCcHHHHHHHHH---HhccCCEEEEEc
Q 017426          244 ---------NLQDIAE----EVEKIQKAMGTGIDVSFDCAGLNKTMSTALG---ATCAGGKVCLVG  293 (372)
Q Consensus       244 ---------~~~~~~~----~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~---~l~~~G~~v~~g  293 (372)
                               +...+..    .-.++.++.++.+|.++-++|+.....-...   .+.+..+++.+.
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Ve  198 (292)
T d2bhsa1         133 EGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQ  198 (292)
T ss_dssp             SSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEE
T ss_pred             cccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEec
Confidence                     1111111    1123334445678999988887655554444   445667776664

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=92.09  E-value=1.1  Score=35.20  Aligned_cols=95  Identities=11%  Similarity=0.080  Sum_probs=61.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHH----HHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~----~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      -||=+|+|. |..++.+|+..--..+++++.++.....+    ++.+.+.+........++.    +..  ..+.+|.|+
T Consensus        32 lvLeIGcG~-G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~~l~----~~~--~~~~~d~v~  104 (204)
T d2fcaa1          32 IHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLT----DVF--EPGEVKRVY  104 (204)
T ss_dssp             EEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHH----HHC--CTTSCCEEE
T ss_pred             eEEEEEecC-cHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccchhhhh----ccc--Cchhhhccc
Confidence            345578764 88999999986544899999998876553    4567766544333222322    111  245677776


Q ss_pred             eCCCc--------------HHHHHHHHHHhccCCEEEEEc
Q 017426          268 DCAGL--------------NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       268 d~~g~--------------~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      -....              +..+..+.+.|+|+|.+.+..
T Consensus       105 i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~T  144 (204)
T d2fcaa1         105 LNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT  144 (204)
T ss_dssp             EESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred             cccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEEE
Confidence            43322              257788999999999987753

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=92.07  E-value=0.41  Score=38.96  Aligned_cols=33  Identities=24%  Similarity=0.465  Sum_probs=29.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEec
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV  222 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~  222 (372)
                      ..+|+|.|+|++|..++..+.+.|...+..+|.
T Consensus        30 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          30 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCeEEEECC
Confidence            459999999999999999999999998888853

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=92.05  E-value=1.3  Score=32.68  Aligned_cols=95  Identities=11%  Similarity=0.093  Sum_probs=56.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhH-HHHHHH---hCCCeEEecCCCcccHHHHHHHHHHHcCCcceE
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYR-LSVAKE---IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~-~~~~~~---lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~  265 (372)
                      .++++|+|.|.+|..+++.+...|.+ +++++.++++ .+.++.   .|... +.-+..+   .+.+++.   +-..+|.
T Consensus         3 knHiII~G~g~~g~~l~~~L~~~~~~-v~vId~d~~~~~~~~~~~~~~~~~v-i~Gd~~d---~~~L~~a---~i~~a~~   74 (153)
T d1id1a_           3 KDHFIVCGHSILAINTILQLNQRGQN-VTVISNLPEDDIKQLEQRLGDNADV-IPGDSND---SSVLKKA---GIDRCRA   74 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTCC-EEEEECCCHHHHHHHHHHHCTTCEE-EESCTTS---HHHHHHH---TTTTCSE
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCC-EEEEeccchhHHHHHHHhhcCCcEE-EEccCcc---hHHHHHh---ccccCCE
Confidence            46799999999999999999999985 6677676654 333333   24432 2212222   2333332   3467999


Q ss_pred             EEeCCCcHHH---HHHHHHHhccCCEEEEE
Q 017426          266 SFDCAGLNKT---MSTALGATCAGGKVCLV  292 (372)
Q Consensus       266 vid~~g~~~~---~~~~~~~l~~~G~~v~~  292 (372)
                      ++-+++....   .....+.+.+.-+++.-
T Consensus        75 vi~~~~~d~~n~~~~~~~r~~~~~~~iia~  104 (153)
T d1id1a_          75 ILALSDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             EEECSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             EEEccccHHHHHHHHHHHHHhCCCCceEEE
Confidence            9988876432   11223344555555543

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.00  E-value=0.35  Score=34.73  Aligned_cols=70  Identities=17%  Similarity=0.287  Sum_probs=46.2

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcc
Q 017426          184 RANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       184 ~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      ...-+.+.+|+|.|+|.+|+-+++.++.+|. .|.++++.+.-      ++       ...+++..+.+.+..+  ..++
T Consensus        24 ~~~~~~~k~vvViGgG~iG~E~A~~l~~~g~-~Vtlie~~~~~------l~-------~~~d~~~~~~~~~~l~--~~gv   87 (123)
T d1nhpa2          24 KTVDPEVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILDRP------LG-------VYLDKEFTDVLTEEME--ANNI   87 (123)
T ss_dssp             HHTCTTCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSST------TT-------TTCCHHHHHHHHHHHH--TTTE
T ss_pred             HhhccCCCEEEEECChHHHHHHHHHhhccce-EEEEEEecCcc------cc-------cccchhhHHHHHHHhh--cCCe
Confidence            3444567899999999999999999999998 57777665421      11       0112445555555544  4567


Q ss_pred             eEEEeC
Q 017426          264 DVSFDC  269 (372)
Q Consensus       264 d~vid~  269 (372)
                      ++.+++
T Consensus        88 ~~~~~~   93 (123)
T d1nhpa2          88 TIATGE   93 (123)
T ss_dssp             EEEESC
T ss_pred             EEEeCc
Confidence            777764

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=91.95  E-value=0.47  Score=39.17  Aligned_cols=96  Identities=19%  Similarity=0.111  Sum_probs=65.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCC-eEEecCCCcccHHHHHHHHHHHcCCcceE
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~d~  265 (372)
                      ..++.+||=+|+|. |..+..+++...-..+++++.+++..+.+++.... ..+..+....++          ..+.+|+
T Consensus        82 ~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~l~~----------~~~sfD~  150 (268)
T d1p91a_          82 DDKATAVLDIGCGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPF----------SDTSMDA  150 (268)
T ss_dssp             CTTCCEEEEETCTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSB----------CTTCEEE
T ss_pred             CCCCCEEEEeCCCC-cHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehhhccC----------CCCCEEE
Confidence            45677888888754 67777777775333789999999988888765432 222222211111          1457999


Q ss_pred             EEeCCCcHHHHHHHHHHhccCCEEEEEcC
Q 017426          266 SFDCAGLNKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       266 vid~~g~~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      |+.... +..+..+.+.|+|+|.++....
T Consensus       151 v~~~~~-~~~~~e~~rvLkpgG~l~~~~p  178 (268)
T d1p91a_         151 IIRIYA-PCKAEELARVVKPGGWVITATP  178 (268)
T ss_dssp             EEEESC-CCCHHHHHHHEEEEEEEEEEEE
T ss_pred             EeecCC-HHHHHHHHHHhCCCcEEEEEee
Confidence            996544 3467889999999999988753

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=91.79  E-value=0.37  Score=34.33  Aligned_cols=35  Identities=26%  Similarity=0.366  Sum_probs=28.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      ..++++|.|+|.+|+=+++.++.+|.+ |.++.+++
T Consensus        21 ~p~~i~IiG~G~ig~E~A~~l~~~G~~-Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIGAGVIGLELGSVWARLGAE-VTVLEAMD   55 (119)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTCE-EEEEESSS
T ss_pred             CCCeEEEECCChHHHHHHHHHHHcCCc-eEEEEeec
Confidence            348899999999999999999999995 66665543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=91.76  E-value=0.27  Score=41.00  Aligned_cols=34  Identities=29%  Similarity=0.433  Sum_probs=27.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      ...+|||+|+ |.+|..++..+...|.+ |+++.++
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~-V~~~~R~   36 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHP-TYVLFRP   36 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCC-EEEECCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCE-EEEEECC
Confidence            3467999998 99999999999899985 5565554

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=91.71  E-value=0.12  Score=40.09  Aligned_cols=37  Identities=30%  Similarity=0.513  Sum_probs=31.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChh
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY  225 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~  225 (372)
                      ..+.+|+|.|+|+.|+.++..+...|. .|.+.+.+++
T Consensus        41 ~~~k~V~IIGaGPAGL~AA~~la~~G~-~Vtl~E~~~~   77 (179)
T d1ps9a3          41 VQKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHSE   77 (179)
T ss_dssp             SSCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSSS
T ss_pred             CCCcEEEEECccHHHHHHHHHHHhhcc-ceEEEeccCc
Confidence            556899999999999999999999998 5788877553

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.70  E-value=0.53  Score=36.64  Aligned_cols=99  Identities=18%  Similarity=0.287  Sum_probs=60.8

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCC--eEEecCCCcccHHHHHHHH
Q 017426          182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD--NIVKVSTNLQDIAEEVEKI  255 (372)
Q Consensus       182 l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~--~v~~~~~~~~~~~~~~~~~  255 (372)
                      ++.....++++||=.|+|. |..++.+++ .+. .+.+++.++...+.+++    .+..  .+.....   |+.+.+   
T Consensus        45 i~~l~~~~~~~VLDiGcG~-G~~~~~la~-~~~-~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~---d~~~~~---  115 (194)
T d1dusa_          45 VENVVVDKDDDILDLGCGY-GVIGIALAD-EVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHS---DLYENV---  115 (194)
T ss_dssp             HHHCCCCTTCEEEEETCTT-SHHHHHHGG-GSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEEC---STTTTC---
T ss_pred             HHhCCcCCCCeEEEEeecC-ChhHHHHHh-hcc-ccceeeeccccchhHHHHHHHhCCccceEEEEEc---chhhhh---
Confidence            3567788999999998743 555566655 344 79999999988777754    2332  1211111   111111   


Q ss_pred             HHHcCCcceEEEeCC----CcH---HHHHHHHHHhccCCEEEEE
Q 017426          256 QKAMGTGIDVSFDCA----GLN---KTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       256 ~~~~~~~~d~vid~~----g~~---~~~~~~~~~l~~~G~~v~~  292 (372)
                         ....+|+|+-..    +..   ..+..+.+.|+++|.++..
T Consensus       116 ---~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         116 ---KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             ---TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ---ccCCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence               146799998621    221   2366778899999987654

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=91.69  E-value=0.084  Score=44.12  Aligned_cols=34  Identities=21%  Similarity=0.477  Sum_probs=29.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      +++|+|+|+|..|++++..++..|. .|.+.+.++
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~-~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSC-EEEEECSSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            5789999999999999999999999 688887653

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=91.66  E-value=0.47  Score=37.83  Aligned_cols=95  Identities=13%  Similarity=0.169  Sum_probs=61.2

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHH---cCCCeEEEEecChhHHHHHHHh----CCCe-EEecCCCcccHHHHHHHHHHH
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARA---FGAPRIVIVDVDDYRLSVAKEI----GADN-IVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~---~g~~~vv~v~~~~~~~~~~~~l----g~~~-v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      .+++.+||=+|+|. |..+..+++.   .++ .|++++.|++-.+.+++.    +... +........++          
T Consensus        37 ~~~~~~vLDlGCGt-G~~~~~l~~~~~~~~~-~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~----------  104 (225)
T d1im8a_          37 VTADSNVYDLGCSR-GAATLSARRNINQPNV-KIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHV----------  104 (225)
T ss_dssp             CCTTCEEEEESCTT-CHHHHHHHHTCCCSSC-EEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTC----------
T ss_pred             cCCCCEEEEeccch-hhHHHHHHHhhcCCCC-ceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhcc----------
Confidence            68899999999853 6666677764   466 799999999988877652    3222 11111111111          


Q ss_pred             cCCcceEEEeCCCc--------HHHHHHHHHHhccCCEEEEEc
Q 017426          259 MGTGIDVSFDCAGL--------NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       259 ~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ....+|+++-...-        ...++.+.+.|+|+|.++...
T Consensus       105 ~~~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         105 EIKNASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             CCCSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccceeeEEeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence            13467777653221        246888999999999999864

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.37  E-value=0.16  Score=39.24  Aligned_cols=41  Identities=17%  Similarity=0.203  Sum_probs=32.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHH
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA  230 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~  230 (372)
                      -.|.+|||.|+|+++.+++.-+...|  .+.++.++.++.+.+
T Consensus        16 ~~~k~vlIlGaGG~arai~~aL~~~~--~i~I~nR~~~ka~~l   56 (177)
T d1nvta1          16 VKDKNIVIYGAGGAARAVAFELAKDN--NIIIANRTVEKAEAL   56 (177)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHTSSS--EEEEECSSHHHHHHH
T ss_pred             cCCCEEEEECCcHHHHHHHHHHcccc--ceeeehhhhhHHHHH
Confidence            36789999999999998877665444  688888888876644

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=91.36  E-value=0.33  Score=39.58  Aligned_cols=33  Identities=33%  Similarity=0.405  Sum_probs=27.1

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChh
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY  225 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~  225 (372)
                      .|||+|+ +++|.++++.+...|+ +|+.++++++
T Consensus         3 VvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~~   36 (257)
T d1fjha_           3 IIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDA   36 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECChH
Confidence            4688887 9999999999999999 5777776543

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.32  E-value=0.11  Score=42.93  Aligned_cols=33  Identities=30%  Similarity=0.507  Sum_probs=28.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      +|+|+|+|..|++++.+++..|...|.+.++++
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            689999999999999999999976677777654

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=91.18  E-value=0.39  Score=41.13  Aligned_cols=36  Identities=19%  Similarity=0.204  Sum_probs=29.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChh
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDY  225 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~  225 (372)
                      ...+|||+|+ |.+|..++..+...|.+ |+++.++.+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~-V~~l~R~~~   38 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHH-VRAQVHSLK   38 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCSC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCe-EEEEECCcc
Confidence            4578999998 99999999999999996 555556544

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=91.18  E-value=0.43  Score=38.44  Aligned_cols=48  Identities=29%  Similarity=0.346  Sum_probs=39.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHH-HHhCCC
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KEIGAD  236 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~-~~lg~~  236 (372)
                      -.|.+|+|.|.|.+|..+++++...|+ ++++++.+..+.+.+ ...|..
T Consensus        37 l~g~~v~IqG~GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~g~~   85 (230)
T d1leha1          37 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD   85 (230)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhcCCc
Confidence            368899999999999999999999999 688888887776654 446654

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=91.05  E-value=0.11  Score=34.23  Aligned_cols=35  Identities=23%  Similarity=0.385  Sum_probs=29.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhH
Q 017426          191 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYR  226 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~  226 (372)
                      .+|.|.|+|-+|++.++-++.+|. .+.+.+.+++.
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~-~v~vldp~~~~   36 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGI-AVWPVGLDAEP   36 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTE-EEEEECTTSCG
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC-EEEEEcCCCCC
Confidence            378999999999999999999999 57777665443

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=90.91  E-value=3.4  Score=34.15  Aligned_cols=104  Identities=16%  Similarity=0.150  Sum_probs=65.5

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE--ecChhHHHHHHHhCCCeEEec-----------------
Q 017426          181 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKEIGADNIVKV-----------------  241 (372)
Q Consensus       181 ~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v--~~~~~~~~~~~~lg~~~v~~~-----------------  241 (372)
                      +++....+++..+...++|..|.++.-.++.+|.+.++++  ..++.+...++.+|+.-+...                 
T Consensus        52 a~~~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~~~~~~~~~~~~~~~~~~~~~  131 (302)
T d1fcja_          52 AEKRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVA  131 (302)
T ss_dssp             HHHHTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHH
T ss_pred             HHHcCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccceEEeccccccchhhhHHHHHHh
Confidence            4455677777776666779999999999999999866666  344467777888887654211                 


Q ss_pred             ---------CCCccc--HH---H-HHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhc
Q 017426          242 ---------STNLQD--IA---E-EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATC  284 (372)
Q Consensus       242 ---------~~~~~~--~~---~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~  284 (372)
                               ......  +.   . .-.++.++.+..+|++|-++|+...+.-....++
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~ti~~Ei~e~~~~~~d~vv~~vG~GG~~~Gi~~~lk  189 (302)
T d1fcja_         132 SDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIK  189 (302)
T ss_dssp             TSTTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHH
T ss_pred             hhccceeccccccccchhHHHHhHHHHHHHHhcCCCCCEEEEcCCCccccccceeeee
Confidence                     000000  00   1 1123334445578999999888666555555554

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=90.90  E-value=0.48  Score=32.37  Aligned_cols=51  Identities=18%  Similarity=0.160  Sum_probs=38.3

Q ss_pred             CCCCCEEEEECCCHHHHHH-HHHHHHcCCCeEEEEecCh-hHHHHHHHhCCCeE
Q 017426          187 IGPETNVLIMGAGPIGLVT-MLAARAFGAPRIVIVDVDD-YRLSVAKEIGADNI  238 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~a-i~l~~~~g~~~vv~v~~~~-~~~~~~~~lg~~~v  238 (372)
                      .+...++.+.|-|++|+.+ +++++..|+ .|.+.|..+ ...+.+.+.|+...
T Consensus         5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~Gi~v~   57 (96)
T d1p3da1           5 MRRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQAGAKIY   57 (96)
T ss_dssp             CTTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHTTCEEE
T ss_pred             chhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHCCCeEE
Confidence            3456789999988888776 899999999 688887753 44556677887543

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.90  E-value=0.086  Score=44.49  Aligned_cols=101  Identities=16%  Similarity=0.183  Sum_probs=59.7

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh----CCCeEE-ecCCCcccHHHHHHHHHHHcC
Q 017426          186 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI----GADNIV-KVSTNLQDIAEEVEKIQKAMG  260 (372)
Q Consensus       186 ~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l----g~~~v~-~~~~~~~~~~~~~~~~~~~~~  260 (372)
                      +.+++.+||=+|+|. |..++.|++. |+ .|++++.|++-.+.+++.    +..... .......++...-...  ...
T Consensus        53 ~~~~~~~vLD~GcG~-G~~~~~la~~-g~-~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  127 (292)
T d1xvaa_          53 RQHGCHRVLDVACGT-GVDSIMLVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDV--PAG  127 (292)
T ss_dssp             HHTTCCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHS--CCT
T ss_pred             hhcCCCEEEEecCCC-cHHHHHHHHc-CC-eeeeccCchHHHHHHHHHHHhcccccccceeeeeecccccccccc--CCC
Confidence            335677898888754 7778888765 87 699999999877766542    211000 0000001111110111  124


Q ss_pred             CcceEEEeCCCc--------------HHHHHHHHHHhccCCEEEE
Q 017426          261 TGIDVSFDCAGL--------------NKTMSTALGATCAGGKVCL  291 (372)
Q Consensus       261 ~~~d~vid~~g~--------------~~~~~~~~~~l~~~G~~v~  291 (372)
                      ..+|.|+.....              ...+..+.+.|+|+|.++.
T Consensus       128 ~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         128 DGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             TCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             CCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence            679999863211              1257888999999999886

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=90.88  E-value=0.23  Score=38.81  Aligned_cols=82  Identities=9%  Similarity=0.225  Sum_probs=53.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeE----EecCC---CcccHHHHHHHHHHHcCCcce
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI----VKVST---NLQDIAEEVEKIQKAMGTGID  264 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v----~~~~~---~~~~~~~~~~~~~~~~~~~~d  264 (372)
                      +|.|+|+|..|.+.+.++...|- .|....++++..+.+.+-+....    +....   ...++.+.+        .+.|
T Consensus         9 KI~ViGaG~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~--------~~ad   79 (189)
T d1n1ea2           9 KAVVFGSGAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAY--------NGAE   79 (189)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHH--------TTCS
T ss_pred             eEEEECCCHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhcc--------CCCC
Confidence            69999999999999988888876 57888888888877765431110    00000   112333322        4689


Q ss_pred             EEEeCCCcHHHHHHHHHHh
Q 017426          265 VSFDCAGLNKTMSTALGAT  283 (372)
Q Consensus       265 ~vid~~g~~~~~~~~~~~l  283 (372)
                      ++|-++.+. .++..++.+
T Consensus        80 ~iiiavPs~-~~~~~~~~~   97 (189)
T d1n1ea2          80 IILFVIPTQ-FLRGFFEKS   97 (189)
T ss_dssp             CEEECSCHH-HHHHHHHHH
T ss_pred             EEEEcCcHH-HHHHHHHHH
Confidence            999999875 555555443

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=90.84  E-value=0.77  Score=30.79  Aligned_cols=45  Identities=18%  Similarity=0.348  Sum_probs=35.5

Q ss_pred             EEEEECCCHHHHH-HHHHHHHcCCCeEEEEecCh-hHHHHHHHhCCCe
Q 017426          192 NVLIMGAGPIGLV-TMLAARAFGAPRIVIVDVDD-YRLSVAKEIGADN  237 (372)
Q Consensus       192 ~vlI~Gag~~G~~-ai~l~~~~g~~~vv~v~~~~-~~~~~~~~lg~~~  237 (372)
                      +|-++|-|++|+. ++++++..|+ .|.+.|..+ +..+.++++|+..
T Consensus         3 ~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~Gi~i   49 (89)
T d1j6ua1           3 KIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKLGIPI   49 (89)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTCCE
T ss_pred             EEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHCCCeE
Confidence            5667788888885 4788899999 688888776 5566789999764

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=90.77  E-value=0.21  Score=35.60  Aligned_cols=35  Identities=23%  Similarity=0.451  Sum_probs=29.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChh
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY  225 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~  225 (372)
                      .++++|.|+|.+|.=+++.+..+|. .|..+.+.++
T Consensus        22 p~~v~IiGgG~ig~E~A~~l~~~G~-~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             CCeEEEECCCccceeeeeeeccccc-EEEEEEecce
Confidence            4799999999999999999999998 4677766543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=90.65  E-value=2.6  Score=31.83  Aligned_cols=44  Identities=11%  Similarity=0.154  Sum_probs=37.0

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC
Q 017426          191 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA  235 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~  235 (372)
                      .+|-|+|.|.+|...+.-+...|+ .|++.++++++.+.+.+-++
T Consensus         3 ~nIg~IGlG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~   46 (176)
T d2pgda2           3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEA   46 (176)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTT
T ss_pred             CcEEEEeEhHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhcc
Confidence            468899999999998888888999 48899999999887766554

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.58  E-value=0.23  Score=42.27  Aligned_cols=95  Identities=17%  Similarity=0.287  Sum_probs=53.8

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHH---HHHhCCCe-EEecCCCcccHHHHHHHHHHHcCC
Q 017426          186 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV---AKEIGADN-IVKVSTNLQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       186 ~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~---~~~lg~~~-v~~~~~~~~~~~~~~~~~~~~~~~  261 (372)
                      .+.+|++||-+|+|. |.+++.+++ .|++.|++++.++.....   ++.-+... +........++        .....
T Consensus        30 ~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~~--------~~~~~   99 (316)
T d1oria_          30 HLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEV--------ELPVE   99 (316)
T ss_dssp             HHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTC--------CCSSS
T ss_pred             ccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHHc--------ccccc
Confidence            356789999998754 655554444 688889999988753222   23334322 22111111111        01236


Q ss_pred             cceEEEeC-CCc--------HHHHHHHHHHhccCCEEE
Q 017426          262 GIDVSFDC-AGL--------NKTMSTALGATCAGGKVC  290 (372)
Q Consensus       262 ~~d~vid~-~g~--------~~~~~~~~~~l~~~G~~v  290 (372)
                      .+|+|+.. .+.        +..+...-+.|+|+|+++
T Consensus       100 ~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_         100 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             eeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            79999742 211        224445667899999876

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.31  E-value=0.63  Score=39.69  Aligned_cols=30  Identities=33%  Similarity=0.421  Sum_probs=25.1

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD  221 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~  221 (372)
                      ..|||+|+ |-+|..++..+...|. .|++++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d   32 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVAD   32 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEE
Confidence            36899998 9999999999999998 466664

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.30  E-value=0.18  Score=40.77  Aligned_cols=37  Identities=27%  Similarity=0.382  Sum_probs=31.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChh
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY  225 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~  225 (372)
                      +.+.+|+|+|+|+.|+.++..++..|. .|.+++.+++
T Consensus        47 ~~~k~VvIIGaGpAGl~aA~~l~~~G~-~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             cCCceEEEEcccHHHHHHHHHHHHhcc-ceeeEeeccc
Confidence            567899999999999999999999999 5777766553

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=90.30  E-value=0.28  Score=41.88  Aligned_cols=74  Identities=18%  Similarity=0.060  Sum_probs=42.9

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCC-CcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      +|||+|+ |-+|..+++.+...|...|++++....+...+....--..+..+- ...++.+   ...    .++|+||.+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~---~~~----~~~d~Vih~   74 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIE---YHV----KKCDVVLPL   74 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHH---HHH----HHCSEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHH---HHH----hCCCccccc
Confidence            6999998 999999998888888446787766554433222211111222221 1122222   121    368999987


Q ss_pred             CCc
Q 017426          270 AGL  272 (372)
Q Consensus       270 ~g~  272 (372)
                      .+.
T Consensus        75 a~~   77 (342)
T d2blla1          75 VAI   77 (342)
T ss_dssp             BCC
T ss_pred             ccc
Confidence            653

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=90.27  E-value=0.37  Score=39.04  Aligned_cols=91  Identities=19%  Similarity=0.154  Sum_probs=57.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHHHcCCcc
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      .++.+||=.||| .|..+..+++ .|. .+++++.|++-.+.+++    .+...-+.. .   |.    ..+.  ..+.|
T Consensus        36 ~~~~~vLDiGCG-~G~~~~~l~~-~g~-~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~-~---d~----~~~~--~~~~f  102 (246)
T d1y8ca_          36 LVFDDYLDLACG-TGNLTENLCP-KFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLAC-Q---DI----SNLN--INRKF  102 (246)
T ss_dssp             CCTTEEEEETCT-TSTTHHHHGG-GSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEEC-C---CG----GGCC--CSCCE
T ss_pred             CCCCeEEEEeCc-CCHHHHHHHH-hCC-ccEeeccchhhhhhccccccccCccceeec-c---ch----hhhc--ccccc
Confidence            456789989986 3666766665 476 69999999987776654    343211111 1   11    1110  14689


Q ss_pred             eEEEeCCCc------H----HHHHHHHHHhccCCEEEE
Q 017426          264 DVSFDCAGL------N----KTMSTALGATCAGGKVCL  291 (372)
Q Consensus       264 d~vid~~g~------~----~~~~~~~~~l~~~G~~v~  291 (372)
                      |+|+...+.      .    ..+..+.++|+|+|.++.
T Consensus       103 D~i~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         103 DLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             EEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             cccceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            999853221      2    246678888999999875

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=90.22  E-value=0.12  Score=42.13  Aligned_cols=33  Identities=24%  Similarity=0.486  Sum_probs=28.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      +|+|+|+|..|+.++..++..|.+.|.+.++++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            589999999999999999999975588887654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=90.16  E-value=0.24  Score=35.30  Aligned_cols=67  Identities=16%  Similarity=0.185  Sum_probs=44.6

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceE
Q 017426          186 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       186 ~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~  265 (372)
                      .++..++|+|.|+|.+|.=+++.++.+|. .|..+.+.+.=      +        ...++++.+.+.+..+  ..++++
T Consensus        18 ~l~~p~~v~IiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~~i------l--------~~~d~~~~~~~~~~l~--~~gV~i   80 (117)
T d1onfa2          18 NIKESKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGNRI------L--------RKFDESVINVLENDMK--KNNINI   80 (117)
T ss_dssp             TCCCCSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSSS------C--------TTSCHHHHHHHHHHHH--HTTCEE
T ss_pred             ccCCCCEEEEECCchHHHHHHHHHHhccc-cceeeehhccc------c--------ccccHHHHHHHHHHHH--hCCCEE
Confidence            34556899999999999999999999998 57777664321      0        1112455555555443  356777


Q ss_pred             EEeC
Q 017426          266 SFDC  269 (372)
Q Consensus       266 vid~  269 (372)
                      .+++
T Consensus        81 ~~~~   84 (117)
T d1onfa2          81 VTFA   84 (117)
T ss_dssp             ECSC
T ss_pred             EECC
Confidence            7654

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.08  E-value=0.28  Score=37.83  Aligned_cols=38  Identities=21%  Similarity=0.354  Sum_probs=31.0

Q ss_pred             EEEEE-CCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHH
Q 017426          192 NVLIM-GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA  230 (372)
Q Consensus       192 ~vlI~-Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~  230 (372)
                      +|.|+ |+|.+|.++++.+...|+ .|++..+++++.+.+
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAK   40 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            57788 569999999999999999 577778888876544

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.07  E-value=2.6  Score=30.87  Aligned_cols=74  Identities=22%  Similarity=0.250  Sum_probs=46.2

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHHHhCCCeEEec--CCCcccHHHHHHHHHHHcCCcceEE
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEIGADNIVKV--STNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~~lg~~~v~~~--~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      .+|.|.|| |.+|..++.++...+. +.++..+.++.+-+.++-..+......  .-...++.+.+        .+.|+|
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~--------~~aDiv   72 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCL--------KGCDVV   72 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHH--------TTCSEE
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHh--------CCCCEE
Confidence            47899997 9999999999988875 678888887655443332222211100  00122333222        579999


Q ss_pred             EeCCCc
Q 017426          267 FDCAGL  272 (372)
Q Consensus       267 id~~g~  272 (372)
                      +-+.|.
T Consensus        73 Vitag~   78 (144)
T d1mlda1          73 VIPAGV   78 (144)
T ss_dssp             EECCSC
T ss_pred             EECCCc
Confidence            998875

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=89.96  E-value=0.18  Score=39.44  Aligned_cols=89  Identities=20%  Similarity=0.148  Sum_probs=55.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .+.++.|.|.|.+|...+++++.+|. .|+..++........+..+....       .+    +.++.    ...|+|.-
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~~-------~~----l~~~l----~~sD~v~~  106 (188)
T d2naca1          43 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH-------AT----REDMY----PVCDVVTL  106 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC-------SS----HHHHG----GGCSEEEE
T ss_pred             cccceeeccccccchhhhhhhhccCc-eEEEEeecccccccccccccccc-------CC----HHHHH----Hhccchhh
Confidence            57899999999999999999999999 58888776555555555553321       11    22222    35677766


Q ss_pred             CCCcHHH-----HHHHHHHhccCCEEEEEc
Q 017426          269 CAGLNKT-----MSTALGATCAGGKVCLVG  293 (372)
Q Consensus       269 ~~g~~~~-----~~~~~~~l~~~G~~v~~g  293 (372)
                      +....+.     -...++.|+++..++-++
T Consensus       107 ~~plt~~T~~li~~~~l~~mk~ga~lIN~a  136 (188)
T d2naca1         107 NCPLHPETEHMINDETLKLFKRGAYIVNTA  136 (188)
T ss_dssp             CSCCCTTTTTCBSHHHHTTSCTTEEEEECS
T ss_pred             cccccccchhhhHHHHHHhCCCCCEEEecC
Confidence            5443211     124556666665555543

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=89.87  E-value=1.1  Score=36.02  Aligned_cols=93  Identities=8%  Similarity=0.040  Sum_probs=58.5

Q ss_pred             CEEEEECCCH----HHHHHHHHHHHc--CCCeEEEEecChhHHH-HHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcc
Q 017426          191 TNVLIMGAGP----IGLVTMLAARAF--GAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  263 (372)
Q Consensus       191 ~~vlI~Gag~----~G~~ai~l~~~~--g~~~vv~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  263 (372)
                      =+|.|+|+|.    ++...+...+..  +++.+.+.+++.++.+ ++++++......|++    +.    ++.+  ...+
T Consensus        17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~~----~~----~l~~--~~~i   86 (237)
T d2nvwa1          17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDS----LE----SFAQ--YKDI   86 (237)
T ss_dssp             EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESC----HH----HHHH--CTTC
T ss_pred             eEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeecc----hh----hccc--cccc
Confidence            3788888755    444444444443  5654445677776644 567888665444432    22    2332  4689


Q ss_pred             eEEEeCCCcHHHHHHHHHHhccC-----CEEEEEc
Q 017426          264 DVSFDCAGLNKTMSTALGATCAG-----GKVCLVG  293 (372)
Q Consensus       264 d~vid~~g~~~~~~~~~~~l~~~-----G~~v~~g  293 (372)
                      |+|+.++....+.+.+..+|..+     +..+.+.
T Consensus        87 D~V~i~tp~~~h~~~~~~al~aG~~~~~~k~V~~E  121 (237)
T d2nvwa1          87 DMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVE  121 (237)
T ss_dssp             SEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEE
T ss_pred             ceeeccCCCcchhhHHHHHHHhcccccCCceEEEe
Confidence            99999999877778888888644     4566665

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=89.87  E-value=0.7  Score=36.17  Aligned_cols=90  Identities=19%  Similarity=0.210  Sum_probs=51.9

Q ss_pred             CCcccccccchhHHH--HHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC-CeEEe
Q 017426          164 VSLEEGAMCEPLSVG--VHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA-DNIVK  240 (372)
Q Consensus       164 ~~~~~aa~~~~~~~a--~~~l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~-~~v~~  240 (372)
                      +.+++..+-+..+..  |.+....++ .|++||=.|+|. |.+++. +...|++.|++++.+++..+.+++--. ..++.
T Consensus        22 ~~leQy~T~~~~a~~~~~~~~~~~dl-~Gk~VLDlGcGt-G~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~   98 (197)
T d1ne2a_          22 NYLEQYPTDASTAAYFLIEIYNDGNI-GGRSVIDAGTGN-GILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMV   98 (197)
T ss_dssp             -----CCCCHHHHHHHHHHHHHHTSS-BTSEEEEETCTT-CHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEE
T ss_pred             cccccCCCCHHHHHHHHHHHHHcCCC-CCCEEEEeCCCC-cHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEE
Confidence            456676666544422  222244565 589999988743 444433 445788789999999999888876432 23332


Q ss_pred             cCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          241 VSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                           .|+    .+    ..+.+|+||-.
T Consensus        99 -----~D~----~~----l~~~fD~Vi~N  114 (197)
T d1ne2a_          99 -----ADV----SE----ISGKYDTWIMN  114 (197)
T ss_dssp             -----CCG----GG----CCCCEEEEEEC
T ss_pred             -----Eeh----hh----cCCcceEEEeC
Confidence                 121    11    14689999854

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.77  E-value=1.1  Score=35.66  Aligned_cols=101  Identities=19%  Similarity=0.235  Sum_probs=65.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEecChhHHHHHHH----hCCCeEEecCCCcccHHHHHHHHHHHc-C
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAF--GAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAM-G  260 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~--g~~~vv~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~~~-~  260 (372)
                      ....+||-+|.+ .|.+++.+|+.+  +. .+++++.+++..+.+++    .|....+..  ...+..+.+.++.... .
T Consensus        58 ~~~k~vLEiGt~-~GyStl~~a~al~~~g-~i~tie~~~~~~~~A~~~~~~ag~~~~i~~--~~Gda~e~l~~~~~~~~~  133 (219)
T d2avda1          58 IQAKKALDLGTF-TGYSALALALALPADG-RVVTCEVDAQPPELGRPLWRQAEAEHKIDL--RLKPALETLDELLAAGEA  133 (219)
T ss_dssp             TTCCEEEEECCT-TSHHHHHHHTTSCTTC-EEEEEESCSHHHHHHHHHHHHTTCTTTEEE--EESCHHHHHHHHHHTTCT
T ss_pred             cCCCeEEEEech-hhHHHHHHHHhCCCCc-eEEEEeechhHHHHHHHHHHhcCccceEEE--EEeehhhcchhhhhhccc
Confidence            445799999863 477788888775  34 79999999988766654    454332221  1234445555544322 4


Q ss_pred             CcceEEEeCCCc---HHHHHHHHHHhccCCEEEEE
Q 017426          261 TGIDVSFDCAGL---NKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       261 ~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~  292 (372)
                      ..||.||--...   ...++.+++.|+++|-++.=
T Consensus       134 ~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~D  168 (219)
T d2avda1         134 GTFDVAVVDADKENCSAYYERCLQLLRPGGILAVL  168 (219)
T ss_dssp             TCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEe
Confidence            579999843222   34677899999999987764

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.75  E-value=0.19  Score=43.48  Aligned_cols=74  Identities=19%  Similarity=0.246  Sum_probs=43.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          189 PETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       189 ~g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      .+-+|||+|+ |-+|..++..+...|. .|+++++..... .............+-  .+... +.+..    .++|.|+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~~~~~-~~~~~~~~~~~~~D~--~~~~~-~~~~~----~~~d~Vi   84 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEH-MTEDMFCDEFHLVDL--RVMEN-CLKVT----EGVDHVF   84 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSS-SCGGGTCSEEEECCT--TSHHH-HHHHH----TTCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCCccc-hhhhcccCcEEEeec--hhHHH-HHHHh----hcCCeEe
Confidence            3568999998 9999999999999998 567775433221 111222223332222  22222 22222    4789999


Q ss_pred             eCCC
Q 017426          268 DCAG  271 (372)
Q Consensus       268 d~~g  271 (372)
                      .+.+
T Consensus        85 h~a~   88 (363)
T d2c5aa1          85 NLAA   88 (363)
T ss_dssp             ECCC
T ss_pred             eccc
Confidence            8663

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.74  E-value=2.6  Score=35.40  Aligned_cols=111  Identities=23%  Similarity=0.200  Sum_probs=69.6

Q ss_pred             HhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEE--ecChhHHHHHHHhCCCeEEecC-----------------
Q 017426          183 RRANIGPETNVLIM-GAGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKEIGADNIVKVS-----------------  242 (372)
Q Consensus       183 ~~~~~~~g~~vlI~-Gag~~G~~ai~l~~~~g~~~vv~v--~~~~~~~~~~~~lg~~~v~~~~-----------------  242 (372)
                      +...++++.+.+|. .+|..|.++...++.+|.+.++++  ..++.+.+.++.+|+.-+....                 
T Consensus        57 ~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~  136 (320)
T d1z7wa1          57 KKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAK  136 (320)
T ss_dssp             HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHH
T ss_pred             HcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHHHh
Confidence            44566677666665 569999999999999999766655  4445788888999986543100                 


Q ss_pred             ----------CCcccHHH----HHHHHHHHcCCcceEEEeCCCcHHHHHHHH---HHhccCCEEEEEc
Q 017426          243 ----------TNLQDIAE----EVEKIQKAMGTGIDVSFDCAGLNKTMSTAL---GATCAGGKVCLVG  293 (372)
Q Consensus       243 ----------~~~~~~~~----~~~~~~~~~~~~~d~vid~~g~~~~~~~~~---~~l~~~G~~v~~g  293 (372)
                                .+..++..    ...++.++..+.+|.++-++|+...+.-..   ....+.-+++.+.
T Consensus       137 ~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~igve  204 (320)
T d1z7wa1         137 TPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVE  204 (320)
T ss_dssp             CTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             CCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcceeeeccc
Confidence                      00001111    112333444567999999888865555433   4455666766653

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=89.73  E-value=0.24  Score=38.80  Aligned_cols=89  Identities=17%  Similarity=0.075  Sum_probs=54.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .|.++.|+|.|.+|+..+++++.+|. .++..+............+...   +    .++.+    +.    ...|+|..
T Consensus        46 ~g~tvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~---~----~~l~~----ll----~~sD~v~l  109 (191)
T d1gdha1          46 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASSSDEASYQATF---H----DSLDS----LL----SVSQFFSL  109 (191)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHHHHTCEE---C----SSHHH----HH----HHCSEEEE
T ss_pred             cccceEEeecccchHHHHHHHHhhcc-ccccccccccccchhhcccccc---c----CCHHH----HH----hhCCeEEe
Confidence            37899999999999999999999999 5777766544333333333211   1    12222    22    24677776


Q ss_pred             CCCcHH-H----HHHHHHHhccCCEEEEEc
Q 017426          269 CAGLNK-T----MSTALGATCAGGKVCLVG  293 (372)
Q Consensus       269 ~~g~~~-~----~~~~~~~l~~~G~~v~~g  293 (372)
                      +..... +    =...++.|+++..++-++
T Consensus       110 ~~plt~~T~~li~~~~l~~mk~~a~lIN~s  139 (191)
T d1gdha1         110 NAPSTPETRYFFNKATIKSLPQGAIVVNTA  139 (191)
T ss_dssp             CCCCCTTTTTCBSHHHHTTSCTTEEEEECS
T ss_pred             cCCCCchHhheecHHHhhCcCCccEEEecC
Confidence            543321 1    124566777766666554

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=89.71  E-value=0.17  Score=40.89  Aligned_cols=36  Identities=31%  Similarity=0.499  Sum_probs=29.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecChhH
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYR  226 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~  226 (372)
                      ++++||+|+ +++|.++++.+...|+ .|+.++++++.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~   37 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRREG   37 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCccc
Confidence            357789987 9999999999999999 57888777653

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=89.57  E-value=0.47  Score=39.14  Aligned_cols=34  Identities=26%  Similarity=0.486  Sum_probs=27.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      -.+|||+|| |.+|..++..+...|.+ |++++++.
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~-V~~l~R~~   37 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHP-TFLLVRES   37 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCC-EEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEECCC
Confidence            358999998 99999999999999985 66665543

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=89.35  E-value=0.24  Score=38.58  Aligned_cols=39  Identities=21%  Similarity=0.426  Sum_probs=33.0

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHH
Q 017426          191 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA  230 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~  230 (372)
                      .+|.|+|+|.+|..++.++...|.+ |+..+.+++..+..
T Consensus         5 ~~vaViGaG~mG~~iA~~~a~~G~~-V~l~D~~~~~l~~~   43 (186)
T d1wdka3           5 KQAAVLGAGIMGGGIAYQSASKGTP-ILMKDINEHGIEQG   43 (186)
T ss_dssp             SSEEEECCHHHHHHHHHHHHHTTCC-EEEECSSHHHHHHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCCe-EEEEECCHHHHhhh
Confidence            4799999999999999999999995 88899998765543

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=89.33  E-value=0.28  Score=34.87  Aligned_cols=35  Identities=26%  Similarity=0.352  Sum_probs=29.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChh
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY  225 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~  225 (372)
                      .++++|.|+|.+|+-+++.++.+|. .|.++.+.++
T Consensus        21 p~~vvIiGgG~ig~E~A~~l~~~G~-~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             CCEEEEECCChhhHHHHHHhhcccc-EEEEEeecch
Confidence            4689999999999999999999998 5777766553

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=89.29  E-value=0.2  Score=42.33  Aligned_cols=37  Identities=22%  Similarity=0.453  Sum_probs=31.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      .....+|+|+|+|..|++++..+...|. .|.+.+.++
T Consensus        27 ~~~pkkV~IIGaG~aGLsaA~~L~~~G~-~V~vlE~~~   63 (370)
T d2iida1          27 TSNPKHVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASE   63 (370)
T ss_dssp             CSSCCEEEEECCBHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            3455799999999999999999988998 688887654

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=89.26  E-value=3.1  Score=30.68  Aligned_cols=93  Identities=19%  Similarity=0.178  Sum_probs=59.1

Q ss_pred             EEEEECC-CHHHHHHHHHHHHc--CCCeEEEEecChhH---HHHHHHhCCCeEEecCCCcccHHHHHHHHHH--------
Q 017426          192 NVLIMGA-GPIGLVTMLAARAF--GAPRIVIVDVDDYR---LSVAKEIGADNIVKVSTNLQDIAEEVEKIQK--------  257 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~--g~~~vv~v~~~~~~---~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~--------  257 (372)
                      +|.|.|+ |.+|..+..+.+..  .+ +|++......-   .+.++++.+..+...++   +..+.+++...        
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~---~~~~~l~~~l~~~~~~~~~   78 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHF-RVVALVAGKNVTRMVEQCLEFSPRYAVMDDE---ASAKLLKTMLQQQGSRTEV   78 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTE-EEEEEEESSCHHHHHHHHHHHCCSEEEESSH---HHHHHHHHHHHHTTCCCEE
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCc-EEEEEEecCcHHHHHHHHHHHhhcccccccH---HHHHHHHHHhhhhcccccc
Confidence            6889998 99999999999986  35 45555444332   33456788888765432   11112221111        


Q ss_pred             ----------HcCCcceEEEeCCCcHHHHHHHHHHhccCCE
Q 017426          258 ----------AMGTGIDVSFDCAGLNKTMSTALGATCAGGK  288 (372)
Q Consensus       258 ----------~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~  288 (372)
                                ....++|+|+.+..+-+.+.-.+..++.+-+
T Consensus        79 ~~g~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~  119 (151)
T d1q0qa2          79 LSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKT  119 (151)
T ss_dssp             EESHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCE
T ss_pred             ccChHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCe
Confidence                      0134688888887777777777888875544

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=89.12  E-value=0.14  Score=44.64  Aligned_cols=31  Identities=26%  Similarity=0.317  Sum_probs=26.7

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEec
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV  222 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~  222 (372)
                      +|||+|+ |-+|..++..+...|..++++++.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~   33 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK   33 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence            6999987 999999999998889877777754

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.09  E-value=0.52  Score=40.17  Aligned_cols=95  Identities=19%  Similarity=0.221  Sum_probs=52.2

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhH---HHHHHHhCCCe-EEecCCCcccHHHHHHHHHHHcCC
Q 017426          186 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYR---LSVAKEIGADN-IVKVSTNLQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       186 ~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~---~~~~~~lg~~~-v~~~~~~~~~~~~~~~~~~~~~~~  261 (372)
                      ...+|++||-.|+|. |..+. +|...|++.|++++.++.-   .+..++.+... +........++       . ....
T Consensus        35 ~~~~~~~VLDlGcGt-G~ls~-~aa~~Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~~~~~l-------~-~~~~  104 (328)
T d1g6q1_          35 DLFKDKIVLDVGCGT-GILSM-FAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDV-------H-LPFP  104 (328)
T ss_dssp             HHHTTCEEEEETCTT-SHHHH-HHHHTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTS-------C-CSSS
T ss_pred             ccCCcCEEEEeCCCC-CHHHH-HHHHhCCCEEEEEeCCHHHHHHHHHHHHhCccccceEEEeehhhc-------c-Cccc
Confidence            345789999998753 55544 3445788899999988632   22233444322 21111111111       0 0246


Q ss_pred             cceEEEeCCCc--------H-HHHHHHHHHhccCCEEE
Q 017426          262 GIDVSFDCAGL--------N-KTMSTALGATCAGGKVC  290 (372)
Q Consensus       262 ~~d~vid~~g~--------~-~~~~~~~~~l~~~G~~v  290 (372)
                      .+|+|+...-.        . ..+...-+.|+|+|.++
T Consensus       105 ~~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         105 KVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             CEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             ceeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            79999752211        1 23344457899999875

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=89.07  E-value=0.4  Score=38.38  Aligned_cols=91  Identities=23%  Similarity=0.208  Sum_probs=58.5

Q ss_pred             EEEEECCCHHHH-HHHHHHHH-cCCCeEEEEecChhHHH-HHHHhCCCe--EEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          192 NVLIMGAGPIGL-VTMLAARA-FGAPRIVIVDVDDYRLS-VAKEIGADN--IVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       192 ~vlI~Gag~~G~-~ai~l~~~-~g~~~vv~v~~~~~~~~-~~~~lg~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      +|.|+|+|.+|. ..+...+. -+++.+.++++++++.+ +.+++|.+.  +..++    ++.    ++.+  ...+|+|
T Consensus        35 riaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~----d~~----ell~--~~~iD~V  104 (221)
T d1h6da1          35 GYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYS----NFD----KIAK--DPKIDAV  104 (221)
T ss_dssp             EEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSS----SGG----GGGG--CTTCCEE
T ss_pred             EEEEEcCcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccC----chh----hhcc--cccceee
Confidence            678889999986 34444444 36755556677777754 557777542  22232    222    2221  3579999


Q ss_pred             EeCCCcHHHHHHHHHHhccCCEEEEEc
Q 017426          267 FDCAGLNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       267 id~~g~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      +-++....+...+..+|. .|.-+.+.
T Consensus       105 ~I~tp~~~H~~~~~~al~-~gk~v~~E  130 (221)
T d1h6da1         105 YIILPNSLHAEFAIRAFK-AGKHVMCE  130 (221)
T ss_dssp             EECSCGGGHHHHHHHHHH-TTCEEEEC
T ss_pred             eeccchhhhhhHHHHhhh-cchhhhcC
Confidence            999988777788888887 45666664

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.05  E-value=0.46  Score=40.29  Aligned_cols=32  Identities=19%  Similarity=0.008  Sum_probs=27.5

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      .++||+|| |-+|..++..+...|. .|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECC
Confidence            47899998 9999999999999999 57887763

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.83  E-value=0.16  Score=42.39  Aligned_cols=33  Identities=33%  Similarity=0.432  Sum_probs=28.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChh
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY  225 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~  225 (372)
                      +|+|.|+|+.|++++..++..|. .|.+++.+++
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~-~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGI-DNVILERQTP   36 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSSCH
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCCC
Confidence            68999999999999999999999 4788877653

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.63  E-value=0.36  Score=34.60  Aligned_cols=34  Identities=24%  Similarity=0.458  Sum_probs=28.8

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      .++++|+|+|.+|+=+++++..+|. .|.++.+.+
T Consensus        23 p~~~vIiG~G~ig~E~A~~l~~lG~-~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCeEEEECCCchHHHHHHHHHhhCc-ceeEEEecc
Confidence            4799999999999999999999999 466775543

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=88.57  E-value=0.71  Score=34.29  Aligned_cols=39  Identities=15%  Similarity=0.175  Sum_probs=29.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHH
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK  231 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~  231 (372)
                      +|-|+|.|.+|+..+.-++..|. .+++.++.+++.....
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~   40 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRSPSTIER   40 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCCHHHHHH
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCC-eEEEEcCchhHHHHHh
Confidence            57788999999999999999998 4666665554444333

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.39  E-value=0.96  Score=35.82  Aligned_cols=98  Identities=19%  Similarity=0.115  Sum_probs=62.3

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhC----CCeEEecCCCcccHHHHHHHHHHHcCC
Q 017426          186 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG----ADNIVKVSTNLQDIAEEVEKIQKAMGT  261 (372)
Q Consensus       186 ~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg----~~~v~~~~~~~~~~~~~~~~~~~~~~~  261 (372)
                      ...++.+||=+|+|. |..+..+++..+. .|.+++.+++-.+.+++.-    ...+......-.++       . ....
T Consensus        57 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~~-------~-~~~~  126 (222)
T d2ex4a1          57 NKTGTSCALDCGAGI-GRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDF-------T-PEPD  126 (222)
T ss_dssp             -CCCCSEEEEETCTT-THHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGC-------C-CCSS
T ss_pred             CCCCCCEEEEeccCC-CHhhHHHHHhcCC-EEEEeecCHHHhhcccccccccccccccccccccccc-------c-cccc
Confidence            456778899899864 7777777665554 7999999999888877642    22211111111111       0 0246


Q ss_pred             cceEEEeC-----CCcH---HHHHHHHHHhccCCEEEEEc
Q 017426          262 GIDVSFDC-----AGLN---KTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       262 ~~d~vid~-----~g~~---~~~~~~~~~l~~~G~~v~~g  293 (372)
                      .+|+|+..     +..+   ..+..+.+.|+++|.++...
T Consensus       127 ~fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~  166 (222)
T d2ex4a1         127 SYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD  166 (222)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccccccccccchhhhhhhHHHHHHHhcCCcceEEEEE
Confidence            79999863     3322   35677888999999998764

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=88.28  E-value=0.43  Score=34.74  Aligned_cols=37  Identities=19%  Similarity=0.386  Sum_probs=31.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      ++++.+++|.|+|.+|.=++..++.+|. .|.++++.+
T Consensus        32 ~~~~k~v~VIGgG~iG~E~A~~l~~~g~-~Vtvie~~~   68 (133)
T d1q1ra2          32 LIADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAA   68 (133)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             hccCCEEEEECCchHHHHHHHHHHhhCc-ceeeeeecc
Confidence            4567899999999999999999999998 577776654

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=88.20  E-value=0.33  Score=36.78  Aligned_cols=36  Identities=11%  Similarity=0.298  Sum_probs=28.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEecCh
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAP-RIVIVDVDD  224 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~-~vv~v~~~~  224 (372)
                      .|.+|+|.|+|.+|+.+++.++.++.+ .|+++++++
T Consensus         1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            478999999999999999999888753 466666554

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=88.20  E-value=1.4  Score=32.93  Aligned_cols=86  Identities=10%  Similarity=0.033  Sum_probs=55.9

Q ss_pred             EEEEECCCHHHHH-HHHHHHHc-CCCeEEEEecChhHH-HHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          192 NVLIMGAGPIGLV-TMLAARAF-GAPRIVIVDVDDYRL-SVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       192 ~vlI~Gag~~G~~-ai~l~~~~-g~~~vv~v~~~~~~~-~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      +|.|.|+|.+|.- .+...+.. +++.+.+.++++++. ++.+.++...   ++    +    +.++.    ..+|+|+.
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~---~~----~----~~~l~----~~~D~V~I   67 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY---AD----S----LSSLA----ASCDAVFV   67 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB---CS----S----HHHHH----TTCSEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc---cc----c----chhhh----hhcccccc
Confidence            6788999998863 56666554 675555566666554 4567787652   11    1    22222    35899999


Q ss_pred             CCCcHHHHHHHHHHhccCCEEEEEc
Q 017426          269 CAGLNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ++....+.+.+...|.. |.-+.+.
T Consensus        68 ~tp~~~h~~~~~~al~~-gk~V~~E   91 (164)
T d1tlta1          68 HSSTASHFDVVSTLLNA-GVHVCVD   91 (164)
T ss_dssp             CSCTTHHHHHHHHHHHT-TCEEEEE
T ss_pred             cccchhccccccccccc-cceeecc
Confidence            98877777778887775 5666664

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=88.20  E-value=0.46  Score=38.61  Aligned_cols=33  Identities=27%  Similarity=0.366  Sum_probs=28.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEe
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD  221 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~  221 (372)
                      -.|.+|+|.|.|.+|..+++++...|+ ++++++
T Consensus        29 l~g~~v~IqGfGnVG~~~a~~L~~~Ga-kvv~vs   61 (242)
T d1v9la1          29 IEGKTVAIQGMGNVGRWTAYWLEKMGA-KVIAVS   61 (242)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEee
Confidence            368899999999999999999999999 466553

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.19  E-value=0.39  Score=36.01  Aligned_cols=37  Identities=24%  Similarity=0.330  Sum_probs=30.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      .-+++|+|+|+|.+|.=++..+.++|++.|.++.+.+
T Consensus        43 ~~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          43 SIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             cCCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            3467899999999999999999999998777775543

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=88.16  E-value=1.3  Score=33.72  Aligned_cols=43  Identities=16%  Similarity=0.179  Sum_probs=36.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCC
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA  235 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~  235 (372)
                      +|-|+|.|.+|...+.-+...|++ |.+.++++++.+.+.+.+.
T Consensus         3 kIGvIGlG~MG~~ma~~L~~~G~~-V~~~dr~~~~~~~l~~~~~   45 (178)
T d1pgja2           3 DVGVVGLGVMGANLALNIAEKGFK-VAVFNRTYSKSEEFMKANA   45 (178)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCC-EEEECSSHHHHHHHHHHTT
T ss_pred             EEEEEeehHHHHHHHHHHHHCCCe-EEEEECCHHHHHHHHHcCC
Confidence            467889999999999888889995 8899999999887766553

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=88.04  E-value=0.62  Score=39.65  Aligned_cols=37  Identities=14%  Similarity=-0.041  Sum_probs=27.3

Q ss_pred             CCEEEEECC---CHHHHHHHHHHHHcCCCeEEEEecChhHH
Q 017426          190 ETNVLIMGA---GPIGLVTMLAARAFGAPRIVIVDVDDYRL  227 (372)
Q Consensus       190 g~~vlI~Ga---g~~G~~ai~l~~~~g~~~vv~v~~~~~~~  227 (372)
                      ++-.||+|+   .++|.++++.+...|++ |+.+.+++...
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~-V~i~~~~~~~~   41 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVK-IIFGIWPPVYN   41 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCE-EEEEECGGGHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCE-EEEEeCchhhh
Confidence            345688884   38999999999999995 66665555433

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.94  E-value=1.2  Score=37.75  Aligned_cols=30  Identities=37%  Similarity=0.489  Sum_probs=25.8

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVD  221 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~  221 (372)
                      ++|||+|+ |-+|..++..+...|.+ |++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~-V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYL-PVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCC-EEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCE-EEEEE
Confidence            58999998 99999999999999985 66664

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=87.84  E-value=1  Score=37.31  Aligned_cols=98  Identities=15%  Similarity=0.234  Sum_probs=64.0

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHHHHHHh----CCCeEEecCCCcccHHHHHHHHHHHc
Q 017426          185 ANIGPETNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       185 ~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      .++.++.+||=.|+| .|..+..+++..+. ..|++++.+++..+.+++.    +....+...+ -.++       .  .
T Consensus        23 ~~~~~~~~ILDiGcG-~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d-~~~~-------~--~   91 (281)
T d2gh1a1          23 WKITKPVHIVDYGCG-YGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGD-ATEI-------E--L   91 (281)
T ss_dssp             SCCCSCCEEEEETCT-TTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESC-TTTC-------C--C
T ss_pred             hccCCcCEEEEecCc-CCHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccc-cccc-------c--c
Confidence            356778899989986 37888888887542 3789999999887776643    3321111111 0110       0  1


Q ss_pred             CCcceEEEeCC-----Cc-HHHHHHHHHHhccCCEEEEEc
Q 017426          260 GTGIDVSFDCA-----GL-NKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       260 ~~~~d~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~g  293 (372)
                      ...+|+|+...     .. ...+..+.+.|+|+|.++...
T Consensus        92 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          92 NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cCCceEEEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            35799998642     22 246778999999999988764

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=87.76  E-value=1.2  Score=38.65  Aligned_cols=62  Identities=19%  Similarity=0.268  Sum_probs=45.2

Q ss_pred             HHHHHHh--cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEe--cChhHHHHHHHhCCCeEE
Q 017426          178 GVHACRR--ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD--VDDYRLSVAKEIGADNIV  239 (372)
Q Consensus       178 a~~~l~~--~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~--~~~~~~~~~~~lg~~~v~  239 (372)
                      |.+++..  .+++++.+|+-..+|..|++++..|+.+|.+.++++.  .++.+.+.++.+|+.-+.
T Consensus       130 A~~~i~~A~~~~~~g~~VVeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~  195 (382)
T d1wkva1         130 AVEIISRLSRRVEKGSLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIV  195 (382)
T ss_dssp             HHHHHHHHTTTSCTTCEEEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHhccCCCCEEEEeCCcHHHHHHHHHHHHcCCCEEEEeeccccccccccccccCcceee
Confidence            5555543  4567777654456699999999999999997666663  355788888999987654

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=87.66  E-value=1.1  Score=38.30  Aligned_cols=33  Identities=18%  Similarity=0.070  Sum_probs=26.6

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      ..|||+|+ |-+|..++..+...|. .|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence            46789997 9999999999999998 578887643

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=87.45  E-value=0.45  Score=38.79  Aligned_cols=95  Identities=17%  Similarity=0.184  Sum_probs=59.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH----hCCC-eE--EecCCCcccHHHHHHHHHHHc
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE----IGAD-NI--VKVSTNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~v--~~~~~~~~~~~~~~~~~~~~~  259 (372)
                      ++++++||=.|+|. |..+..+++. |...|++++.+++..+.+++    .+.. .+  +..+.....+         ..
T Consensus        22 ~~~~~~VLDlGCG~-G~~~~~~~~~-~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~---------~~   90 (252)
T d1ri5a_          22 TKRGDSVLDLGCGK-GGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM---------DL   90 (252)
T ss_dssp             CCTTCEEEEETCTT-TTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC---------CC
T ss_pred             CCCcCEEEEecccC-cHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc---------cc
Confidence            57899999999864 5556667665 55579999999998877754    3322 22  1111111110         01


Q ss_pred             CCcceEEEeCCCc------H----HHHHHHHHHhccCCEEEEE
Q 017426          260 GTGIDVSFDCAGL------N----KTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       260 ~~~~d~vid~~g~------~----~~~~~~~~~l~~~G~~v~~  292 (372)
                      ...+|+|+.....      .    ..+..+.+.|+|+|.++..
T Consensus        91 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          91 GKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             SSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             cccceEEEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            4579999864321      1    2455677889999998764

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=87.25  E-value=1.3  Score=35.95  Aligned_cols=102  Identities=15%  Similarity=0.006  Sum_probs=65.1

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh-CCCeEEec-CCCcccHHHHHHHHHHHc
Q 017426          182 CRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI-GADNIVKV-STNLQDIAEEVEKIQKAM  259 (372)
Q Consensus       182 l~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l-g~~~v~~~-~~~~~~~~~~~~~~~~~~  259 (372)
                      ++.....++.+||=+|||. |..+..++...+. .|.+++.+++-.+.+++. .....+.+ ...-+++       . ..
T Consensus        86 l~~l~~~~~~~vLD~GcG~-G~~t~~ll~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d~~~~-------~-~~  155 (254)
T d1xtpa_          86 IASLPGHGTSRALDCGAGI-GRITKNLLTKLYA-TTDLLEPVKHMLEEAKRELAGMPVGKFILASMETA-------T-LP  155 (254)
T ss_dssp             HHTSTTCCCSEEEEETCTT-THHHHHTHHHHCS-EEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGC-------C-CC
T ss_pred             HhhCCCCCCCeEEEecccC-ChhhHHHHhhcCc-eEEEEcCCHHHHHhhhccccccccceeEEcccccc-------c-cC
Confidence            3445556777888898864 7888888776554 789999999988888754 22222221 1111111       0 01


Q ss_pred             CCcceEEEeCC-----CcH---HHHHHHHHHhccCCEEEEEc
Q 017426          260 GTGIDVSFDCA-----GLN---KTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       260 ~~~~d~vid~~-----g~~---~~~~~~~~~l~~~G~~v~~g  293 (372)
                      .+.||+|+..-     ..+   ..+..+.+.|+++|.+++..
T Consensus       156 ~~~fD~I~~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e  197 (254)
T d1xtpa_         156 PNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE  197 (254)
T ss_dssp             SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCccceEEeeccccccchhhhHHHHHHHHHhcCCCcEEEEEe
Confidence            46799997632     222   34677888999999988754

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.25  E-value=0.33  Score=40.91  Aligned_cols=36  Identities=25%  Similarity=0.541  Sum_probs=30.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      ++..+|+|+|+|..|+.++..+...|. .|.+.+.++
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~-~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            445689999999999999999999999 588886644

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=87.24  E-value=0.43  Score=33.68  Aligned_cols=34  Identities=29%  Similarity=0.599  Sum_probs=28.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      +++++|.|+|.+|.=+++.++.+|. .|..+++.+
T Consensus        21 p~~vvIiGgG~~G~E~A~~l~~~g~-~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARE   54 (115)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCeEEEECCCHHHHHHHHHHhhccc-ceEEEeeec
Confidence            3799999999999999999999998 477776654

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=87.14  E-value=0.45  Score=38.32  Aligned_cols=35  Identities=29%  Similarity=0.478  Sum_probs=29.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      +.-.+|+|+|+|..|++++..+...|. .|.++++.
T Consensus         4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~-~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGSGVIGLSSALILARKGY-SVHILARD   38 (268)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             CCCCcEEEECccHHHHHHHHHHHHCCC-CEEEEeCC
Confidence            344689999999999999999999999 57888753

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=87.14  E-value=0.22  Score=37.24  Aligned_cols=79  Identities=13%  Similarity=0.003  Sum_probs=47.5

Q ss_pred             EECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCCcHH
Q 017426          195 IMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK  274 (372)
Q Consensus       195 I~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  274 (372)
                      ++|+|.+|.++++.++. +.....+..++.++.+.+.+.+......   . .+           .-...|+||-|+... 
T Consensus         4 fIG~G~mg~~l~~~L~~-~~~~~~v~~R~~~~~~~l~~~~~~~~~~---~-~~-----------~~~~~DiVil~v~d~-   66 (153)
T d2i76a2           4 FVGTGTLTRFFLECLKD-RYEIGYILSRSIDRARNLAEVYGGKAAT---L-EK-----------HPELNGVVFVIVPDR-   66 (153)
T ss_dssp             EESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCS---S-CC-----------CCC---CEEECSCTT-
T ss_pred             EEeCcHHHHHHHHHHHh-CCCEEEEEeCChhhhcchhhcccccccc---h-hh-----------hhccCcEEEEeccch-
Confidence            56999999998887655 3334456788888888776655432211   1 11           125689999999864 


Q ss_pred             HHHHHHHHhccCCEEE
Q 017426          275 TMSTALGATCAGGKVC  290 (372)
Q Consensus       275 ~~~~~~~~l~~~G~~v  290 (372)
                      .+......|+..++++
T Consensus        67 ~i~~v~~~l~~~~~iv   82 (153)
T d2i76a2          67 YIKTVANHLNLGDAVL   82 (153)
T ss_dssp             THHHHHTTTCCSSCCE
T ss_pred             hhhHHHhhhcccceee
Confidence            6677777776555443

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=87.10  E-value=0.34  Score=41.13  Aligned_cols=35  Identities=31%  Similarity=0.400  Sum_probs=29.8

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChh
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY  225 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~  225 (372)
                      ..+|+|+|||..|+.++..+...|. .|.+.+.++.
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~k~G~-~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSSS
T ss_pred             CCEEEEECCcHHHHHHHHHHHhCCC-CEEEEECCCC
Confidence            4689999999999999999988898 6888877653

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=87.05  E-value=0.44  Score=39.80  Aligned_cols=36  Identities=19%  Similarity=0.150  Sum_probs=29.5

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCeEEEEecChh
Q 017426          189 PETNVLIMGA-G--PIGLVTMLAARAFGAPRIVIVDVDDY  225 (372)
Q Consensus       189 ~g~~vlI~Ga-g--~~G~~ai~l~~~~g~~~vv~v~~~~~  225 (372)
                      .|.++||+|+ |  ++|.++++.+...|++ |+.+.+++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~-Vvi~~~~~~   45 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAE-ILVGTWVPA   45 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCE-EEEEEEHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCE-EEEEeCchh
Confidence            5789999997 5  7999999999999994 666666554

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.95  E-value=1.6  Score=33.32  Aligned_cols=95  Identities=16%  Similarity=0.127  Sum_probs=50.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecC--hhHHHHHHHhCCCeEE--ecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD--DYRLSVAKEIGADNIV--KVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~--~~~~~~~~~lg~~~v~--~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      +|.|+|+|..|.+.+..+...|. .|....+.  ++..+.+.+-.....+  ......-.....+.+..    ...|+||
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~ad~Ii   76 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCL----ENAEVVL   76 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHH----TTCSEEE
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHH----hccchhh
Confidence            57899999999998888888887 56666553  2223333221110000  00000000011122221    5789999


Q ss_pred             eCCCcHHHHHHHHHHhcc---CCEEEEE
Q 017426          268 DCAGLNKTMSTALGATCA---GGKVCLV  292 (372)
Q Consensus       268 d~~g~~~~~~~~~~~l~~---~G~~v~~  292 (372)
                      .++... .++..++.+.+   +..++.+
T Consensus        77 ~avps~-~~~~~~~~l~~~l~~~~ii~~  103 (180)
T d1txga2          77 LGVSTD-GVLPVMSRILPYLKDQYIVLI  103 (180)
T ss_dssp             ECSCGG-GHHHHHHHHTTTCCSCEEEEC
T ss_pred             cccchh-hhHHHHHhhccccccceeccc
Confidence            999975 55555554443   2444444

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=86.87  E-value=0.63  Score=37.06  Aligned_cols=95  Identities=18%  Similarity=0.118  Sum_probs=58.2

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceE
Q 017426          186 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  265 (372)
Q Consensus       186 ~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~  265 (372)
                      +.-.+.+||=+|+|. |..+..+++ .|. .|++++.+++..+.+++...+.+-.....-+++         ...+.+|+
T Consensus        17 ~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~---------~~~~~fD~   84 (225)
T d2p7ia1          17 PFFRPGNLLELGSFK-GDFTSRLQE-HFN-DITCVEASEEAISHAQGRLKDGITYIHSRFEDA---------QLPRRYDN   84 (225)
T ss_dssp             GGCCSSCEEEESCTT-SHHHHHHTT-TCS-CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC---------CCSSCEEE
T ss_pred             hhCCCCcEEEEeCCC-cHHHHHHHH-cCC-eEEEEeCcHHHhhhhhccccccccccccccccc---------cccccccc
Confidence            334567899998754 666666654 476 599999999999988765433322111111111         02467999


Q ss_pred             EEeC-----CCcH-HHHHHHH-HHhccCCEEEEE
Q 017426          266 SFDC-----AGLN-KTMSTAL-GATCAGGKVCLV  292 (372)
Q Consensus       266 vid~-----~g~~-~~~~~~~-~~l~~~G~~v~~  292 (372)
                      |+..     +..+ ..+..+. ++|+++|.++..
T Consensus        85 I~~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          85 IVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             EEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             ccccceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence            9752     2222 2344555 578999988764

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=86.86  E-value=0.39  Score=37.15  Aligned_cols=83  Identities=20%  Similarity=0.194  Sum_probs=54.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .|.+|.|+|.|.+|..++++++.+|+ +|++.++++..       +....  +    .++    .++.    ...|+|+.
T Consensus        41 ~gk~vgIiG~G~IG~~va~~l~~~g~-~v~~~d~~~~~-------~~~~~--~----~~l----~ell----~~sDiv~~   98 (181)
T d1qp8a1          41 QGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPKE-------GPWRF--T----NSL----EEAL----REARAAVC   98 (181)
T ss_dssp             TTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCCC-------SSSCC--B----SCS----HHHH----TTCSEEEE
T ss_pred             cCceEEEeccccccccceeeeecccc-ccccccccccc-------cceee--e----ech----hhhh----hccchhhc
Confidence            57899999999999999999999999 68888765431       11100  1    122    2332    46788887


Q ss_pred             CCCcHH-H----HHHHHHHhccCCEEEEEc
Q 017426          269 CAGLNK-T----MSTALGATCAGGKVCLVG  293 (372)
Q Consensus       269 ~~g~~~-~----~~~~~~~l~~~G~~v~~g  293 (372)
                      ++...+ +    -...++.|+++..++.++
T Consensus        99 ~~pl~~~t~~li~~~~l~~mk~~ailIN~~  128 (181)
T d1qp8a1          99 ALPLNKHTRGLVKYQHLALMAEDAVFVNVG  128 (181)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTCEEEECS
T ss_pred             ccccccccccccccceeeeccccceEEecc
Confidence            654321 1    135667788888777664

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=86.82  E-value=0.33  Score=34.84  Aligned_cols=37  Identities=22%  Similarity=0.354  Sum_probs=30.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChh
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY  225 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~  225 (372)
                      +..++++|.|+|.+|+=+++.++.+|. .|.++.+++.
T Consensus        23 ~~p~~~viiG~G~iglE~A~~~~~~G~-~Vtvi~~~~~   59 (123)
T d1dxla2          23 EIPKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFASE   59 (123)
T ss_dssp             SCCSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred             ccCCeEEEEccchHHHHHHHHHHhcCC-eEEEEEEccc
Confidence            345799999999999999999999998 5777766543

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.71  E-value=0.54  Score=33.72  Aligned_cols=34  Identities=24%  Similarity=0.305  Sum_probs=29.0

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          190 ETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       190 g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      .++++|.|+|.+|+=+++.++++|. .|..+.+++
T Consensus        22 pk~vvIvGgG~iG~E~A~~l~~~G~-~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCEEEEEcCCccHHHHHHHHhcCCc-EEEEEeecc
Confidence            3699999999999999999999999 577776644

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.64  E-value=0.47  Score=33.96  Aligned_cols=33  Identities=15%  Similarity=0.166  Sum_probs=27.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEec
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDV  222 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~  222 (372)
                      ..++++|.|+|.+|+=+++.++++|.+ |..+.+
T Consensus        19 ~P~~vvIIGgG~iG~E~A~~l~~lG~~-Vtii~~   51 (122)
T d1h6va2          19 CPGKTLVVGASYVALECAGFLAGIGLD-VTVMVR   51 (122)
T ss_dssp             CCCSEEEECCSHHHHHHHHHHHHTTCC-EEEEES
T ss_pred             CCCeEEEECCCccHHHHHHHHhhcCCe-EEEEEe
Confidence            347899999999999999999999996 444544

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=86.61  E-value=0.33  Score=38.21  Aligned_cols=35  Identities=31%  Similarity=0.526  Sum_probs=30.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      .|.+|.|+|.|.+|+.++++++.+|+ +|++.++..
T Consensus        44 ~~ktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~   78 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYP   78 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred             cceeeeeeecccccccccccccccce-eeeccCCcc
Confidence            46789999999999999999999999 578887643

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.60  E-value=0.17  Score=42.90  Aligned_cols=31  Identities=26%  Similarity=0.327  Sum_probs=26.2

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEec
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDV  222 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~  222 (372)
                      .+|||+|+ |-+|..++..+...|. .|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence            58999998 9999999999988998 4677653

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=86.47  E-value=0.51  Score=33.95  Aligned_cols=35  Identities=29%  Similarity=0.455  Sum_probs=29.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      +..++++|.|+|.+|+=+++..+.+|. .|..+...
T Consensus        24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~-~Vtive~~   58 (125)
T d1ojta2          24 EVPGKLLIIGGGIIGLEMGTVYSTLGS-RLDVVEMM   58 (125)
T ss_dssp             CCCSEEEEESCSHHHHHHHHHHHHHTC-EEEEECSS
T ss_pred             ccCCeEEEECCCHHHHHHHHHhhcCCC-EEEEEEee
Confidence            345899999999999999999999999 46666553

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=86.33  E-value=0.61  Score=38.16  Aligned_cols=31  Identities=26%  Similarity=0.434  Sum_probs=26.9

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          192 NVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      +|||+|+ |.+|..++..++..|. .|++++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~   34 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNV-EVIPTDVQ   34 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSE-EEEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEeech
Confidence            6899998 9999999999999998 57887664

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=86.23  E-value=0.91  Score=32.58  Aligned_cols=88  Identities=27%  Similarity=0.318  Sum_probs=53.0

Q ss_pred             CCCEEEEECCCHH--H---------HHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHH
Q 017426          189 PETNVLIMGAGPI--G---------LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       189 ~g~~vlI~Gag~~--G---------~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      .-++|||+|+|+.  |         .-++.-+|..|+ .++.+.++++....-..+ ++.++...-.    .+.+.++.+
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~-~~iliN~NP~TVstd~d~-aD~lYfePlt----~e~v~~Ii~   79 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGY-RVINVNSNPATIMTDPEM-ADATYIEPIH----WEVVRKIIE   79 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTC-EEEEECSCTTCGGGCGGG-SSEEECSCCC----HHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCC-eEEEecCchHhhhcChhh-cceeeeecCC----HHHHHHHHH
Confidence            3468999987653  3         345555567799 588888888876432221 4444321111    222333332


Q ss_pred             HcCCcceEEEeCCCcHHHHHHHHHHhc
Q 017426          258 AMGTGIDVSFDCAGLNKTMSTALGATC  284 (372)
Q Consensus       258 ~~~~~~d~vid~~g~~~~~~~~~~~l~  284 (372)
                        ....|.|+-..|++-.++.+.++..
T Consensus        80 --~E~pd~il~~~GGQtalnla~~L~~  104 (127)
T d1a9xa3          80 --KERPDAVLPTMGGQTALNCALELER  104 (127)
T ss_dssp             --HHCCSEEECSSSHHHHHHHHHHHHH
T ss_pred             --HhCcCCeEEEeeeehHhHHHHHHHH
Confidence              2578999999999866666666544

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=86.09  E-value=0.65  Score=37.97  Aligned_cols=52  Identities=15%  Similarity=0.105  Sum_probs=35.8

Q ss_pred             cccccchhHHHHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Q 017426          168 EGAMCEPLSVGVHACRRAN-IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV  220 (372)
Q Consensus       168 ~aa~~~~~~~a~~~l~~~~-~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v  220 (372)
                      +|.....+..+-.+++..+ --.|.+|+|.|.|.+|..+++++...|++ ++++
T Consensus        13 eATG~Gv~~~~~~~~~~~~~~l~g~~v~IQGfGnVG~~~a~~L~e~Gak-vvav   65 (255)
T d1bgva1          13 EATGYGSVYYVEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAELGAK-AVTL   65 (255)
T ss_dssp             THHHHHHHHHHHHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHHTCE-EEEE
T ss_pred             ccchHHHHHHHHHHHHhCCCCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEE
Confidence            3443333333334454433 23678999999999999999999999995 5555

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=86.00  E-value=2.5  Score=35.24  Aligned_cols=102  Identities=14%  Similarity=0.127  Sum_probs=65.5

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEe--cChhHHHHHHHhCCCeEEecCC-----------------
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD--VDDYRLSVAKEIGADNIVKVST-----------------  243 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~--~~~~~~~~~~~lg~~~v~~~~~-----------------  243 (372)
                      +...+.++.+|+...+|..|+++.-.|+.+|.+.++++.  .+..+...++.+|+..+.....                 
T Consensus        54 ~~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~~~~~~~~~~~~~~~~~~~~~  133 (310)
T d1y7la1          54 KDGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASD  133 (310)
T ss_dssp             HTTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHC
T ss_pred             HcCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEeccCccccchhhHHHHHHHHhh
Confidence            445567777766667799999999999999998666663  3446777888899876542110                 


Q ss_pred             --------C--ccc-HH---H-HHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhc
Q 017426          244 --------N--LQD-IA---E-EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATC  284 (372)
Q Consensus       244 --------~--~~~-~~---~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~  284 (372)
                              .  +.. ..   + ...++.+..+..+|.++.++|+...+.-....++
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk  189 (310)
T d1y7la1         134 PSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIK  189 (310)
T ss_dssp             TTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHH
T ss_pred             cCccccCCCCcchhhHHHhhhhHHHHHHHhcCCCCCEEEecCcCCcchhHHHHHHH
Confidence                    0  000 00   0 1123333345579999998888766666666554

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=86.00  E-value=0.71  Score=34.54  Aligned_cols=41  Identities=20%  Similarity=0.156  Sum_probs=33.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHH
Q 017426          188 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLS  228 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~  228 (372)
                      ++..+|.|.|+|.+|..++.++...+...++..+.++++.+
T Consensus         5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~~   45 (154)
T d1pzga1           5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPE   45 (154)
T ss_dssp             SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHH
T ss_pred             cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccch
Confidence            45678999999999999888888888767888887776533

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=85.69  E-value=2.9  Score=35.03  Aligned_cols=100  Identities=23%  Similarity=0.293  Sum_probs=60.5

Q ss_pred             HhcCCCCCCEEEEE-CC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH----HHhCCCeEEecCCCcccHHHHHHHHH
Q 017426          183 RRANIGPETNVLIM-GA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQ  256 (372)
Q Consensus       183 ~~~~~~~g~~vlI~-Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~----~~lg~~~v~~~~~~~~~~~~~~~~~~  256 (372)
                      ....+++|++||=. +| |+--..++++....|  .+++.+.+++|...+    +.+|...++........+.       
T Consensus       110 ~~l~~~~g~~vlD~CAapGgKt~~l~~~~~~~~--~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d~~~~~-------  180 (313)
T d1ixka_         110 VALDPKPGEIVADMAAAPGGKTSYLAQLMRNDG--VIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIG-------  180 (313)
T ss_dssp             HHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCS--EEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGG-------
T ss_pred             hcccCCccceeeecccchhhhhHhhhhhccccc--ceeeeccCHHHHHHHHHHHHHHHhhccccccccccccc-------
Confidence            34567999998664 44 544343333333333  588999999887654    4578776655443222211       


Q ss_pred             HHcCCcceEEE-e--CCCcH-------------------------HHHHHHHHHhccCCEEEEE
Q 017426          257 KAMGTGIDVSF-D--CAGLN-------------------------KTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       257 ~~~~~~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~G~~v~~  292 (372)
                       .....||.|+ |  |+|..                         ..+..++..++++|+++-.
T Consensus       181 -~~~~~fD~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~gG~lVYs  243 (313)
T d1ixka_         181 -ELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYS  243 (313)
T ss_dssp             -GGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             -cccccccEEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCCcEEEEe
Confidence             1246799887 4  55542                         2456688889999976643

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=85.66  E-value=5  Score=29.15  Aligned_cols=80  Identities=23%  Similarity=0.325  Sum_probs=52.8

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeC
Q 017426          191 TNVLIMG-AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  269 (372)
Q Consensus       191 ~~vlI~G-ag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  269 (372)
                      .+|.|+| .|.+|...+..++..|++ |.+.+++++.......-+++.++.... .....+.+.++.... .+=.+++|+
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~-V~~~d~~~~~~~~~~~~~~~~v~~~~~-~~~~~~v~~~~~~~~-~~~~iiiD~   86 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYP-ISILDREDWAVAESILANADVVIVSVP-INLTLETIERLKPYL-TENMLLADL   86 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCC-EEEECTTCGGGHHHHHTTCSEEEECSC-GGGHHHHHHHHGGGC-CTTSEEEEC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCC-cEecccccccccchhhhhccccccccc-hhhheeeeecccccc-cCCceEEEe
Confidence            4899999 599999999999999995 788888777666555567776654322 233334444443221 222477787


Q ss_pred             CCcH
Q 017426          270 AGLN  273 (372)
Q Consensus       270 ~g~~  273 (372)
                      .+..
T Consensus        87 ~Svk   90 (152)
T d2pv7a2          87 TSVK   90 (152)
T ss_dssp             CSCC
T ss_pred             cccC
Confidence            6654

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=85.66  E-value=1.2  Score=33.66  Aligned_cols=82  Identities=17%  Similarity=0.148  Sum_probs=53.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCC
Q 017426          192 NVLIMGAGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  270 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~-g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  270 (372)
                      +|.|+|+|.+|...+..++.. +++.+.++++++++.      ....+..+.    +.    ..+    ...+|+|+.|+
T Consensus         5 rvgiiG~G~ig~~~~~~l~~~~~~elvav~~~~~~~~------~~~~~~~~~----~~----~~~----~~~~D~Vvi~t   66 (170)
T d1f06a1           5 RVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLD------TKTPVFDVA----DV----DKH----ADDVDVLFLCM   66 (170)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCS------SSSCEEEGG----GG----GGT----TTTCSEEEECS
T ss_pred             eEEEECChHHHHHHHHHHHhCCCcEEEEEEecccccc------cccccccch----hh----hhh----ccccceEEEeC
Confidence            688999999999888877764 665554555554321      112222211    11    111    35799999999


Q ss_pred             CcHHHHHHHHHHhccCCEEEE
Q 017426          271 GLNKTMSTALGATCAGGKVCL  291 (372)
Q Consensus       271 g~~~~~~~~~~~l~~~G~~v~  291 (372)
                      +...+.+.+.+.|..|-.++.
T Consensus        67 p~~~h~~~a~~aL~aG~~vv~   87 (170)
T d1f06a1          67 GSATDIPEQAPKFAQFACTVD   87 (170)
T ss_dssp             CTTTHHHHHHHHHTTTSEEEC
T ss_pred             CCcccHHHHHHHHHCCCcEEE
Confidence            887788888899987777664

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=85.63  E-value=2.8  Score=35.30  Aligned_cols=114  Identities=11%  Similarity=0.126  Sum_probs=67.8

Q ss_pred             HHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE--ecChhHHHHHHHhCCCeEEecCC-----------
Q 017426          178 GVHACRRA-NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKEIGADNIVKVST-----------  243 (372)
Q Consensus       178 a~~~l~~~-~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v--~~~~~~~~~~~~lg~~~v~~~~~-----------  243 (372)
                      |++++..+ .-.+..+|+...+|..|.+++..++.+|.+.++++  ..++++...++.+|+.-+. ...           
T Consensus        62 a~~~i~~~~~~~~~~~vv~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~-~~~~~~~~~~~~~~  140 (331)
T d1tdja1          62 AYAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLL-HGANFDEAKAKAIE  140 (331)
T ss_dssp             HHHHHHTTTTSSCSSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEEC-CCSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCeeeecccchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEE-cCcccccchhhhhh
Confidence            44555432 22344455555668889999999999999766655  3445678888999987543 111           


Q ss_pred             -------------CcccHH----HHHHHHHHHcCCcceEEEeCCCcHHHHHH---HHHHhccCCEEEEEc
Q 017426          244 -------------NLQDIA----EEVEKIQKAMGTGIDVSFDCAGLNKTMST---ALGATCAGGKVCLVG  293 (372)
Q Consensus       244 -------------~~~~~~----~~~~~~~~~~~~~~d~vid~~g~~~~~~~---~~~~l~~~G~~v~~g  293 (372)
                                   ++....    ....++.++ ...+|.||-++|+...+.-   .++.+.+.-+++.+.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q-~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve  209 (331)
T d1tdja1         141 LSQQQGFTWVPPFDHPMVIAGQGTLALELLQQ-DAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVE  209 (331)
T ss_dssp             HHHHHCCEECCSSCCHHHHHHHHHHHHHHHHH-CTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             hhhcCCCccccccCChHHhhhhhhHHHHHHHh-cCCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEec
Confidence                         011111    111222232 3468999998887655443   444455667777764

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=85.35  E-value=0.78  Score=34.89  Aligned_cols=98  Identities=18%  Similarity=0.225  Sum_probs=59.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEec--ChhHHHHHHHhCCCe------E------EecCC------CcccHHHH
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDV--DDYRLSVAKEIGADN------I------VKVST------NLQDIAEE  251 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~--~~~~~~~~~~lg~~~------v------~~~~~------~~~~~~~~  251 (372)
                      +|-|.|-|-+|+++.+.+...+.+.+.+-+.  +.+...++-++.-.+      +      +.++.      ...+..+ 
T Consensus         2 kIgINGfGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~-   80 (169)
T d1dssg1           2 KIGINGFGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN-   80 (169)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG-
T ss_pred             eEEEECCcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH-
Confidence            6889999999999999888888865444443  335555555432111      0      00000      0011111 


Q ss_pred             HHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEcC
Q 017426          252 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       252 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      + .|.   ..++|+||||+|.-...+.+..++..+-+-+.++-
T Consensus        81 i-~W~---~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisa  119 (169)
T d1dssg1          81 I-PWS---KAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISA  119 (169)
T ss_dssp             C-CHH---HHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESS
T ss_pred             C-Ccc---ccCCCEEEecCceEcCHHHHHHHHhcCCceEeecC
Confidence            0 121   24799999999986666778888887766666654

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=85.22  E-value=0.5  Score=36.94  Aligned_cols=88  Identities=19%  Similarity=0.269  Sum_probs=52.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .|.++.|+|.|.+|+.++++++.+|+ +|++.++.... +.....+....       .++.    ++.    ...|+|.-
T Consensus        48 ~gktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~-~~~~~~~~~~~-------~~l~----~ll----~~sD~i~~  110 (193)
T d1mx3a1          48 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSD-GVERALGLQRV-------STLQ----DLL----FHSDCVTL  110 (193)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCT-THHHHHTCEEC-------SSHH----HHH----HHCSEEEE
T ss_pred             eCceEEEeccccccccceeeeecccc-ceeeccCcccc-cchhhhccccc-------cchh----hcc----ccCCEEEE
Confidence            57899999999999999999999999 57777664432 22333443221       1222    222    23577766


Q ss_pred             CCCcHH-H----HHHHHHHhccCCEEEEEc
Q 017426          269 CAGLNK-T----MSTALGATCAGGKVCLVG  293 (372)
Q Consensus       269 ~~g~~~-~----~~~~~~~l~~~G~~v~~g  293 (372)
                      +..... +    -...+..|+++..++-.+
T Consensus       111 ~~plt~~T~~li~~~~l~~mk~~a~lIN~s  140 (193)
T d1mx3a1         111 HCGLNEHNHHLINDFTVKQMRQGAFLVNTA  140 (193)
T ss_dssp             CCCCCTTCTTSBSHHHHTTSCTTEEEEECS
T ss_pred             eecccccchhhhhHHHHhccCCCCeEEecC
Confidence            544321 1    113456667666665554

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=85.19  E-value=1.8  Score=37.45  Aligned_cols=92  Identities=15%  Similarity=0.101  Sum_probs=60.5

Q ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHH---h-CCCeEE--------ec----CCCcccHHHHHHHHHHHcC
Q 017426          197 GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE---I-GADNIV--------KV----STNLQDIAEEVEKIQKAMG  260 (372)
Q Consensus       197 Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~---l-g~~~v~--------~~----~~~~~~~~~~~~~~~~~~~  260 (372)
                      +.+++|...+++++..|++.|+..+.+++..+.+++   + +.....        ..    .....|....+.    ..+
T Consensus        52 ~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~Da~~~~~----~~~  127 (375)
T d2dula1          52 ALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA----ERH  127 (375)
T ss_dssp             SSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH----HST
T ss_pred             cCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehhhhhhhhH----hhc
Confidence            447778999999999999899999999999888764   2 221100        00    001123322222    235


Q ss_pred             CcceEE-EeCCCcHH-HHHHHHHHhccCCEEEEE
Q 017426          261 TGIDVS-FDCAGLNK-TMSTALGATCAGGKVCLV  292 (372)
Q Consensus       261 ~~~d~v-id~~g~~~-~~~~~~~~l~~~G~~v~~  292 (372)
                      ..||+| ||..|++. -++.+++.++.+|-+...
T Consensus       128 ~~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~vT  161 (375)
T d2dula1         128 RYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVT  161 (375)
T ss_dssp             TCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEE
T ss_pred             CcCCcccCCCCCCcHHHHHHHHHHhccCCEEEEE
Confidence            679977 69988854 566888999988776654

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=84.43  E-value=5.6  Score=28.78  Aligned_cols=35  Identities=29%  Similarity=0.408  Sum_probs=26.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhH
Q 017426          192 NVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYR  226 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~  226 (372)
                      +|.|.|+|.+|...+..+...+ +..++..+.++++
T Consensus         3 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~D~~~~~   38 (142)
T d1y6ja1           3 KVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEK   38 (142)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---
T ss_pred             eEEEECCCHHHHHHHHHHHhcCCCCEEEEEeccCCc
Confidence            7888999999999887777766 3568888877765

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=84.31  E-value=1.6  Score=30.88  Aligned_cols=85  Identities=19%  Similarity=0.223  Sum_probs=49.3

Q ss_pred             CCEEEEECCCHH--H---------HHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHH
Q 017426          190 ETNVLIMGAGPI--G---------LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       190 g~~vlI~Gag~~--G---------~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      ..+|||+|+|+.  |         .-++.-+|..|+ .++.+.++++....-.. -++.++.. .-.   .+.+.++.+ 
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~-~~IliN~NPeTVstd~d-~aD~lYfe-plt---~e~v~~Ii~-   76 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGY-ETIMVNCNPETVSTDYD-TSDRLYFE-PVT---LEDVLEIVR-   76 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTC-EEEEECCCTTSSTTSTT-SSSEEECC-CCS---HHHHHHHHH-
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCC-eEEEEecChhhhhcChh-hcCceEEc-cCC---HHHHHHHHH-
Confidence            468999987653  3         345555567899 57888888887643111 14444321 111   222333322 


Q ss_pred             cCCcceEEEeCCCcHHHHHHHHHH
Q 017426          259 MGTGIDVSFDCAGLNKTMSTALGA  282 (372)
Q Consensus       259 ~~~~~d~vid~~g~~~~~~~~~~~  282 (372)
                       ..+.|.|+-..|++-.++.+..+
T Consensus        77 -~E~p~~ii~~~GGQtalnla~~L   99 (121)
T d1a9xa4          77 -IEKPKGVIVQYGGQTPLKLARAL   99 (121)
T ss_dssp             -HHCCSEEECSSSTHHHHTTHHHH
T ss_pred             -HhCCCEEEeehhhhhHHHHHHHH
Confidence             24678899999987555544443

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=84.27  E-value=0.93  Score=33.80  Aligned_cols=92  Identities=20%  Similarity=0.163  Sum_probs=53.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCC--eEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          190 ETNVLIMGA-GPIGLVTMLAARAFGAP--RIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       190 g~~vlI~Ga-g~~G~~ai~l~~~~g~~--~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      |-+|.|.|| |-+|+-+++++....+.  .+.... +.+.....-.............+.            .....|++
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~-s~~s~G~~~~~~~~~~~~~~~~~~------------~~~~~d~~   67 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA-SARSAGKSLKFKDQDITIEETTET------------AFEGVDIA   67 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEE-CGGGTTCEEEETTEEEEEEECCTT------------TTTTCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEec-ccccccccccccCCcccccccchh------------hhhhhhhh
Confidence            458999998 99999999999877542  333332 222111000011111111111111            13578999


Q ss_pred             EeCCCcHHHHHHHHHHhccCCEEEEEcC
Q 017426          267 FDCAGLNKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       267 id~~g~~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      |-+.+..............+-+++..+.
T Consensus        68 f~~~~~~~s~~~~~~~~~~~~~VIDlSs   95 (154)
T d2gz1a1          68 LFSAGSSTSAKYAPYAVKAGVVVVDNTS   95 (154)
T ss_dssp             EECSCHHHHHHHHHHHHHTTCEEEECSS
T ss_pred             hhccCccchhhHHhhhccccceehhcCh
Confidence            9988876566666667777788888763

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.23  E-value=0.57  Score=36.79  Aligned_cols=69  Identities=19%  Similarity=0.271  Sum_probs=41.0

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~-~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .+|||+|| |.+|..++..+...|.. .|++..+++..       ....+ .  ....++.+..    ......+|.||.
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-------~~~~~-~--~~~~d~~~~~----~~~~~~~d~vi~   68 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------EHPRL-D--NPVGPLAELL----PQLDGSIDTAFC   68 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------CCTTE-E--CCBSCHHHHG----GGCCSCCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-------hcccc-c--ccccchhhhh----hccccchheeee
Confidence            69999998 99999999988888853 34444433211       00111 1  1112333222    222467899999


Q ss_pred             CCCcH
Q 017426          269 CAGLN  273 (372)
Q Consensus       269 ~~g~~  273 (372)
                      ++|..
T Consensus        69 ~~g~~   73 (212)
T d2a35a1          69 CLGTT   73 (212)
T ss_dssp             CCCCC
T ss_pred             eeeee
Confidence            98764

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=84.07  E-value=0.47  Score=38.56  Aligned_cols=33  Identities=24%  Similarity=0.448  Sum_probs=28.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChh
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY  225 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~  225 (372)
                      -|+|+|+|+.|++++..+...|. .|.+++.+++
T Consensus         6 DViIIGaG~aGl~aA~~la~~G~-~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGKK   38 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             cEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCC
Confidence            47899999999999888888998 5888887764

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.03  E-value=0.5  Score=37.54  Aligned_cols=31  Identities=19%  Similarity=0.353  Sum_probs=27.1

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          193 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       193 vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      |+|+|+|..|+.++..+...|. +|.++++++
T Consensus         8 viViGaG~~Gl~~A~~La~~G~-~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGTGITECILSGLLSVDGK-KVLHIDKQD   38 (297)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence            7889999999999999889998 588888865

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=84.02  E-value=0.48  Score=38.22  Aligned_cols=31  Identities=32%  Similarity=0.739  Sum_probs=26.4

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          193 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       193 vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      |+|+|+|+.|++++..+...|. +|++++.++
T Consensus         5 ViIIGaG~aGl~aA~~la~~G~-~V~liEk~~   35 (251)
T d2i0za1           5 VIVIGGGPSGLMAAIGAAEEGA-NVLLLDKGN   35 (251)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            7889999999998888888999 578887655

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=83.96  E-value=0.76  Score=34.88  Aligned_cols=30  Identities=30%  Similarity=0.442  Sum_probs=26.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEE
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIV  218 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv  218 (372)
                      ++++|+|.|+|.+|.-++.-++.+|.+..+
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v~v   31 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNI   31 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCCSEE
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCCceEE
Confidence            578999999999999999999999986433

>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=83.80  E-value=4.2  Score=31.59  Aligned_cols=94  Identities=18%  Similarity=0.136  Sum_probs=61.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHH----HHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~----~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      .||=+|+|. |..++.+|+...-..+++++.++.....+    ++.+...+..+..+..++.+.+      ....+|.|+
T Consensus        34 lvLdIGcG~-G~~~~~lA~~~p~~~~iGid~~~~~v~~a~~~~~~~~l~Ni~~~~~da~~l~~~~------~~~~~~~i~  106 (204)
T d1yzha1          34 IHVEVGSGK-GAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYF------EDGEIDRLY  106 (204)
T ss_dssp             EEEEESCTT-SHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTS------CTTCCSEEE
T ss_pred             eEEEEeccC-CHHHHHHHHHCCCCceEEEeccHHHHHHHHHhhhhhccccceeeecCHHHHhhhc------cCCceehhc
Confidence            444468764 89999999987545899999998765543    4567665543333223332111      235677776


Q ss_pred             eCCCc--------------HHHHHHHHHHhccCCEEEEE
Q 017426          268 DCAGL--------------NKTMSTALGATCAGGKVCLV  292 (372)
Q Consensus       268 d~~g~--------------~~~~~~~~~~l~~~G~~v~~  292 (372)
                      -....              +..++.+.+.|+++|.+...
T Consensus       107 i~fPdPw~K~~h~krRl~~~~~l~~~~~~LkpgG~l~i~  145 (204)
T d1yzha1         107 LNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK  145 (204)
T ss_dssp             EESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred             ccccccccchhhhhhhhhHHHHHHHHHHhCCCCcEEEEE
Confidence            54432              35678889999999998765

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=83.67  E-value=1.7  Score=32.87  Aligned_cols=95  Identities=19%  Similarity=0.210  Sum_probs=56.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh-hHHHHHHHhCCC-----e-E--------------EecCCCcccHHH
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD-YRLSVAKEIGAD-----N-I--------------VKVSTNLQDIAE  250 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~-~~~~~~~~lg~~-----~-v--------------~~~~~~~~~~~~  250 (372)
                      +|.|.|-|-+|+.+.+.+...+++.+.+-+..+ +...++-++.-.     . +              ..+...+  ..+
T Consensus         2 kigINGfGRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~--p~~   79 (168)
T d2g82a1           2 KVGINGFGRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKD--PKE   79 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSS--GGG
T ss_pred             EEEEECCcHHHHHHHHHHhcCCCEEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCC--hHH
Confidence            678999999999999988888886444444332 334444333211     0 0              1111111  100


Q ss_pred             HHHHHHHHcCCcceEEEeCCCcHHHHHHHHHHhccCCEEEEEc
Q 017426          251 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG  293 (372)
Q Consensus       251 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  293 (372)
                       + .|.   ..++|+|+||+|.-...+.+..++..+-+-|.++
T Consensus        80 -i-~W~---~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiS  117 (168)
T d2g82a1          80 -I-PWA---EAGVGVVIESTGVFTDADKAKAHLEGGAKKVIIT  117 (168)
T ss_dssp             -C-CTG---GGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEES
T ss_pred             -C-ccc---ccCCceeEeccccccchHHhhhhhccccceeeec
Confidence             0 121   3579999999998656677778888665555554

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=83.56  E-value=1.1  Score=33.18  Aligned_cols=39  Identities=21%  Similarity=0.323  Sum_probs=32.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHH
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRL  227 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~  227 (372)
                      |..+|-|.|+|.+|...+.++...+...++..+.++++.
T Consensus         2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~   40 (150)
T d1t2da1           2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMP   40 (150)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcc
Confidence            456899999999999988888888888888888877653

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.53  E-value=0.9  Score=35.53  Aligned_cols=41  Identities=24%  Similarity=0.358  Sum_probs=35.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHh
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEI  233 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~l  233 (372)
                      +|.|+|+|-+|+.++..+...|. .|++.+.++++.+.+.+-
T Consensus         2 kI~ViGlG~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~g   42 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQG   42 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT
T ss_pred             EEEEECCCHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhccc
Confidence            57889999999998888888898 689999999988877653

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=83.43  E-value=1.1  Score=34.63  Aligned_cols=88  Identities=19%  Similarity=0.166  Sum_probs=55.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  268 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid  268 (372)
                      .|.++.|.|.|.+|+.++++++.+|. +|++.++....... ...+...        .++.    ++.    ...|+|.-
T Consensus        43 ~~k~vgiiG~G~IG~~va~~~~~fg~-~v~~~d~~~~~~~~-~~~~~~~--------~~l~----ell----~~sDiv~~  104 (184)
T d1ygya1          43 FGKTVGVVGLGRIGQLVAQRIAAFGA-YVVAYDPYVSPARA-AQLGIEL--------LSLD----DLL----ARADFISV  104 (184)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCHHHH-HHHTCEE--------CCHH----HHH----HHCSEEEE
T ss_pred             cceeeeeccccchhHHHHHHhhhccc-eEEeecCCCChhHH-hhcCcee--------ccHH----HHH----hhCCEEEE
Confidence            57789999999999999999999999 68888765544332 3334321        1222    222    24688877


Q ss_pred             CCCcHHH----H-HHHHHHhccCCEEEEEcC
Q 017426          269 CAGLNKT----M-STALGATCAGGKVCLVGM  294 (372)
Q Consensus       269 ~~g~~~~----~-~~~~~~l~~~G~~v~~g~  294 (372)
                      +......    + ...+..|+++..++-++.
T Consensus       105 ~~Plt~~T~~lin~~~l~~mk~~a~lIN~sR  135 (184)
T d1ygya1         105 HLPKTPETAGLIDKEALAKTKPGVIIVNAAR  135 (184)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             cCCCCchhhhhhhHHHHhhhCCCceEEEecc
Confidence            6543211    1 145666777666665543

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=83.42  E-value=0.4  Score=39.50  Aligned_cols=32  Identities=28%  Similarity=0.462  Sum_probs=27.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      +|+|+|+|..|+.++..+...|.+ |.+.++++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~-V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGTD-AVLLESSA   33 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTCC-EEEECSSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCCC-EEEEecCC
Confidence            589999999999999999999995 78887653

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=83.24  E-value=1.8  Score=36.32  Aligned_cols=98  Identities=20%  Similarity=0.285  Sum_probs=59.8

Q ss_pred             EEEC-CCHHHHHHHHHHHHcCCCeEEEE--ecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHH--------------
Q 017426          194 LIMG-AGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ--------------  256 (372)
Q Consensus       194 lI~G-ag~~G~~ai~l~~~~g~~~vv~v--~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~--------------  256 (372)
                      +|.+ +|..|.+++..|+.+|.+.++++  ..++.+.+.++.+|+.-+. +.....+.....++..              
T Consensus        72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~-~~~~~~~~~~~a~~~a~~~g~~~~~~~~~~  150 (318)
T d1v71a1          72 VLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIM-YDRYKDDREKMAKEISEREGLTIIPPYDHP  150 (318)
T ss_dssp             EEECCSSHHHHHHHHHHHHTTCCEEEEEETTCCHHHHHHHHHTTCEEEE-ECTTTTCHHHHHHHHHHHHTCBCCCSSSSH
T ss_pred             eeeeccchhhHHHHHhhcccccceeecccccccHHHHHHHHHcCCcEEe-ccCCchHHHHHHHHHHHhcCCEecCCcccc
Confidence            4444 59999999999999998766666  3344677788888887543 2222222222222222              


Q ss_pred             --------------HHcCCcceEEEeCCCcHHHHH---HHHHHhccCCEEEEEc
Q 017426          257 --------------KAMGTGIDVSFDCAGLNKTMS---TALGATCAGGKVCLVG  293 (372)
Q Consensus       257 --------------~~~~~~~d~vid~~g~~~~~~---~~~~~l~~~G~~v~~g  293 (372)
                                    ++. +.+|.+|-++|+...+.   ..++.+.+..+++.+.
T Consensus       151 ~~~~g~~t~~~Ei~~q~-~~~d~vvv~~G~GG~~~Gi~~~~~~~~~~~~ii~v~  203 (318)
T d1v71a1         151 HVLAGQGTAAKELFEEV-GPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVE  203 (318)
T ss_dssp             HHHHHHTHHHHHHHHHH-CCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             ccccccchHHHHHHHhc-CCCCEEEEcCCchHHHHHHHHHHHhhCCCceeeccc
Confidence                          111 35788888887754433   3445566777777664

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=83.22  E-value=1.7  Score=33.70  Aligned_cols=90  Identities=14%  Similarity=0.156  Sum_probs=58.6

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEE
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  266 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~v  266 (372)
                      +.++.+||=+|+|. |..+..+.      .+++++.+++..+.+++-+... +..+..+..+          ..+.+|+|
T Consensus        34 ~~~~~~vLDiGcG~-G~~~~~~~------~~~giD~s~~~~~~a~~~~~~~-~~~d~~~l~~----------~~~~fD~I   95 (208)
T d1vlma_          34 LLPEGRGVEIGVGT-GRFAVPLK------IKIGVEPSERMAEIARKRGVFV-LKGTAENLPL----------KDESFDFA   95 (208)
T ss_dssp             HCCSSCEEEETCTT-STTHHHHT------CCEEEESCHHHHHHHHHTTCEE-EECBTTBCCS----------CTTCEEEE
T ss_pred             hCCCCeEEEECCCC-cccccccc------eEEEEeCChhhccccccccccc-cccccccccc----------cccccccc
Confidence            35677899899853 55444441      3588999999999988866543 3222211111          14679999


Q ss_pred             EeCC-----Cc-HHHHHHHHHHhccCCEEEEEcC
Q 017426          267 FDCA-----GL-NKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       267 id~~-----g~-~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      +...     .. ...++.+.+.|+|+|.++....
T Consensus        96 ~~~~~l~h~~d~~~~l~~~~~~L~pgG~l~i~~~  129 (208)
T d1vlma_          96 LMVTTICFVDDPERALKEAYRILKKGGYLIVGIV  129 (208)
T ss_dssp             EEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccccccccccchhhhhhcCCCCceEEEEec
Confidence            8632     22 2467789999999999887643

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.07  E-value=0.75  Score=38.53  Aligned_cols=44  Identities=18%  Similarity=0.118  Sum_probs=32.4

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEecCh--hHHHHHHHhCC
Q 017426          191 TNVLIMGA-GPIGLVTMLAARAFGAPRIVIVDVDD--YRLSVAKEIGA  235 (372)
Q Consensus       191 ~~vlI~Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~--~~~~~~~~lg~  235 (372)
                      .+|||+|+ |-+|..++..+...|. .|+++++..  ...+.++.++.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~l~~~~~   47 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGI   47 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcccHHHHHHhcc
Confidence            48999998 9999999999888898 577776543  23344555553

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=83.05  E-value=0.55  Score=37.01  Aligned_cols=30  Identities=30%  Similarity=0.558  Sum_probs=25.8

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          193 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       193 vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      |+|+|+|+.|+.++..+.++|.+ |++++..
T Consensus         6 vvVIGgGpaGl~aA~~aa~~G~k-V~vie~~   35 (221)
T d1dxla1           6 VVIIGGGPGGYVAAIKAAQLGFK-TTCIEKR   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTCC-EEEEECS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCc-EEEEEec
Confidence            78889999999999999999995 7777654

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=82.90  E-value=6.7  Score=28.41  Aligned_cols=38  Identities=32%  Similarity=0.522  Sum_probs=30.3

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCC-CeEEEEecChhHHH
Q 017426          191 TNVLIMGAGPIGLVTMLAARAFGA-PRIVIVDVDDYRLS  228 (372)
Q Consensus       191 ~~vlI~Gag~~G~~ai~l~~~~g~-~~vv~v~~~~~~~~  228 (372)
                      .+|.|+|+|.+|..++..+...+. ..++..+.++++.+
T Consensus         2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~   40 (143)
T d1llda1           2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVE   40 (143)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccch
Confidence            578899999999998877777664 57888888886643

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=82.85  E-value=6.6  Score=28.29  Aligned_cols=37  Identities=24%  Similarity=0.367  Sum_probs=29.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcC-CCeEEEEecChhHHH
Q 017426          192 NVLIMGAGPIGLVTMLAARAFG-APRIVIVDVDDYRLS  228 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g-~~~vv~v~~~~~~~~  228 (372)
                      +|.|.|+|.+|...+..+...+ +..++..+.++++.+
T Consensus         2 KI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~~   39 (142)
T d1guza1           2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQ   39 (142)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHH
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccch
Confidence            5788899999999888887776 457888898887644

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.79  E-value=1.3  Score=36.39  Aligned_cols=105  Identities=13%  Similarity=0.138  Sum_probs=56.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHH----c-CCC-eEEEEecChhHHHHHHHh-C----CCe-EEecCCCcccHHHHHHH
Q 017426          187 IGPETNVLIMGAGPIGLVTMLAARA----F-GAP-RIVIVDVDDYRLSVAKEI-G----ADN-IVKVSTNLQDIAEEVEK  254 (372)
Q Consensus       187 ~~~g~~vlI~Gag~~G~~ai~l~~~----~-g~~-~vv~v~~~~~~~~~~~~l-g----~~~-v~~~~~~~~~~~~~~~~  254 (372)
                      .++.-+||=+|+|. |.+...+++.    . +.. .+++++.++...+.+++. .    ... .+.+..  .++.+....
T Consensus        38 ~~~~~~VLDiGcG~-G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  114 (280)
T d1jqea_          38 TKSEIKILSIGGGA-GEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHK--ETSSEYQSR  114 (280)
T ss_dssp             TCSEEEEEEETCTT-SHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEEC--SCHHHHHHH
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchh--hhhhhhcch
Confidence            45555788888743 4444444332    2 221 467889998887776553 1    111 111111  122211111


Q ss_pred             HHH-HcCCcceEEEeC-----CCc-HHHHHHHHHHhccCCEEEEEcC
Q 017426          255 IQK-AMGTGIDVSFDC-----AGL-NKTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       255 ~~~-~~~~~~d~vid~-----~g~-~~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      ... .....||+|+-.     ... ...+..+.+.|+|+|.++....
T Consensus       115 ~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~~  161 (280)
T d1jqea_         115 MLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVV  161 (280)
T ss_dssp             HTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             hcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEEe
Confidence            111 125679999863     222 3578889999999998877643

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=82.57  E-value=0.89  Score=32.32  Aligned_cols=35  Identities=20%  Similarity=0.295  Sum_probs=29.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      .+.+++|.|+|.+|.=+++.++.+|. .|..+.+++
T Consensus        31 ~~~~vvIiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   65 (122)
T d1xhca2          31 NSGEAIIIGGGFIGLELAGNLAEAGY-HVKLIHRGA   65 (122)
T ss_dssp             HHSEEEEEECSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             cCCcEEEECCcHHHHHHHHHhhcccc-eEEEEeccc
Confidence            34699999999999999999999998 567776653

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=82.18  E-value=6.4  Score=27.65  Aligned_cols=91  Identities=13%  Similarity=0.104  Sum_probs=57.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEEeCCC
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  271 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  271 (372)
                      .++|+|.|.+|+.+++.++  +. .+++++.++++.+.++..|...+. -+..+   .+.+++.   +-..++.++-+..
T Consensus         2 HivI~G~g~~g~~l~~~L~--~~-~i~vi~~d~~~~~~~~~~~~~~i~-Gd~~~---~~~L~~a---~i~~A~~vi~~~~   71 (129)
T d2fy8a1           2 HVVICGWSESTLECLRELR--GS-EVFVLAEDENVRKKVLRSGANFVH-GDPTR---VSDLEKA---NVRGARAVIVNLE   71 (129)
T ss_dssp             CEEEESCCHHHHHHHHTSC--GG-GEEEEESCTTHHHHHHHTTCEEEE-SCTTS---HHHHHHT---TCTTCSEEEECCS
T ss_pred             EEEEECCCHHHHHHHHHHc--CC-CCEEEEcchHHHHHHHhcCccccc-cccCC---HHHHHHh---hhhcCcEEEEecc
Confidence            5888999999998877764  33 466778889988888888865432 22222   2334332   3467888888777


Q ss_pred             cHHH---HHHHHHHhccCCEEEEE
Q 017426          272 LNKT---MSTALGATCAGGKVCLV  292 (372)
Q Consensus       272 ~~~~---~~~~~~~l~~~G~~v~~  292 (372)
                      ....   .-...+.+.|..+++..
T Consensus        72 ~d~~n~~~~~~~r~~~~~~~iia~   95 (129)
T d2fy8a1          72 SDSETIHCILGIRKIDESVRIIAE   95 (129)
T ss_dssp             SHHHHHHHHHHHHHHCSSSCEEEE
T ss_pred             chhhhHHHHHHHHHHCCCceEEEE
Confidence            6421   22344456666665544

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=82.12  E-value=6.2  Score=32.30  Aligned_cols=98  Identities=19%  Similarity=0.248  Sum_probs=58.0

Q ss_pred             hcCCCCCCEEEEE-CC-CHHHHHHHHHHHHcCCCeEEEEecChhHHHHH----HHhCCCeEEecCCCcccHHHHHHHHHH
Q 017426          184 RANIGPETNVLIM-GA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQK  257 (372)
Q Consensus       184 ~~~~~~g~~vlI~-Ga-g~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~~----~~lg~~~v~~~~~~~~~~~~~~~~~~~  257 (372)
                      ....++|++||=. .| |+=...+.++   ..-..+++.+.+++|...+    +.+|...+...... .....    .  
T Consensus        97 ~L~~~~g~~vLD~CAaPGgKt~~la~l---~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~-~~~~~----~--  166 (284)
T d1sqga2          97 WLAPQNGEHILDLCAAPGGKTTHILEV---APEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG-RYPSQ----W--  166 (284)
T ss_dssp             HHCCCTTCEEEEESCTTCHHHHHHHHH---CTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCT-TCTHH----H--
T ss_pred             ccCccccceeEeccCccccchhhhhhh---hhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccc-cccch----h--
Confidence            3467899999876 44 5444433333   3223689999999987654    55787654433221 11111    1  


Q ss_pred             HcCCcceEEE-e--CCCcH-------------------------HHHHHHHHHhccCCEEEE
Q 017426          258 AMGTGIDVSF-D--CAGLN-------------------------KTMSTALGATCAGGKVCL  291 (372)
Q Consensus       258 ~~~~~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~G~~v~  291 (372)
                      .....||.|+ |  |+|..                         ..+..++..|+++|+++-
T Consensus       167 ~~~~~fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvY  228 (284)
T d1sqga2         167 CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVY  228 (284)
T ss_dssp             HTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred             cccccccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEE
Confidence            1246799987 4  66653                         134556667888887664

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=82.09  E-value=0.91  Score=37.78  Aligned_cols=32  Identities=31%  Similarity=0.504  Sum_probs=28.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEe
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD  221 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~  221 (372)
                      .|.+|+|.|-|.+|..+++++...|+ +|++++
T Consensus        35 ~gktvaIqGfGnVG~~~A~~L~e~Ga-kvv~vs   66 (293)
T d1hwxa1          35 GDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVG   66 (293)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEE
Confidence            57899999999999999999999999 566653

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=82.08  E-value=3.1  Score=33.40  Aligned_cols=101  Identities=17%  Similarity=0.163  Sum_probs=59.6

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecChhHHHH----HHHhCCCeEEecCCCcccHHHHHHHHHHH
Q 017426          183 RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV----AKEIGADNIVKVSTNLQDIAEEVEKIQKA  258 (372)
Q Consensus       183 ~~~~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~~~~~----~~~lg~~~v~~~~~~~~~~~~~~~~~~~~  258 (372)
                      +...+....+||=+|+| .|..++.++++..--.+++.+.. +..+.    +.+.+....+....  .|+.+       .
T Consensus        74 ~~~d~~~~~~VLDvGcG-~G~~~~~la~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~rv~~~~--~D~~~-------~  142 (253)
T d1tw3a2          74 AAYDWTNVRHVLDVGGG-KGGFAAAIARRAPHVSATVLEMA-GTVDTARSYLKDEGLSDRVDVVE--GDFFE-------P  142 (253)
T ss_dssp             HHSCCTTCSEEEEETCT-TSHHHHHHHHHCTTCEEEEEECT-THHHHHHHHHHHTTCTTTEEEEE--CCTTS-------C
T ss_pred             hhcCCccCCEEEEeCCC-CCHHHHHHHHhcceeEEEEccCH-HHHHHHHHHHHHhhcccchhhcc--ccchh-------h
Confidence            44556777889888875 47888899988743367777764 33333    33344321111111  11100       0


Q ss_pred             cCCcceEEEeCC-----CcH---HHHHHHHHHhccCCEEEEEcC
Q 017426          259 MGTGIDVSFDCA-----GLN---KTMSTALGATCAGGKVCLVGM  294 (372)
Q Consensus       259 ~~~~~d~vid~~-----g~~---~~~~~~~~~l~~~G~~v~~g~  294 (372)
                      ...++|+|+-..     ..+   ..+..+.+.|+|+|++++...
T Consensus       143 ~~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~  186 (253)
T d1tw3a2         143 LPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER  186 (253)
T ss_dssp             CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             cccchhheeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence            135799997432     222   246788899999999998754

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=81.66  E-value=0.7  Score=38.75  Aligned_cols=33  Identities=27%  Similarity=0.561  Sum_probs=27.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecChh
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDY  225 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~~  225 (372)
                      .|+|+|||..|++++..++..|.+ +++.+..++
T Consensus         9 dV~IIGAG~sGl~~a~~L~~~G~~-v~i~Ek~~~   41 (298)
T d1w4xa1           9 DVLVVGAGFSGLYALYRLRELGRS-VHVIETAGD   41 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCC-EEEECSSSS
T ss_pred             CEEEECccHHHHHHHHHHHhCCCC-EEEEEcCCC
Confidence            478899999999999999999995 777776543

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=81.66  E-value=0.45  Score=36.75  Aligned_cols=34  Identities=24%  Similarity=0.395  Sum_probs=28.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          189 PETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       189 ~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      ++..|+|+|+|+.|+.++..+.++|.+ ++++++.
T Consensus         4 k~~dVvIIGGGpaGl~AA~~~ar~g~~-v~iie~~   37 (190)
T d1trba1           4 KHSKLLILGSGPAGYTAAVYAARANLQ-PVLITGM   37 (190)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHTTTCC-CEEECCS
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHcCCc-eEEEEee
Confidence            345799999999999999999999995 6666543

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=81.51  E-value=0.53  Score=39.46  Aligned_cols=32  Identities=16%  Similarity=0.489  Sum_probs=27.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecCh
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDD  224 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~~  224 (372)
                      .|+|+|||..|+.++..+...|. .|.+.+.++
T Consensus         3 dv~IIGaG~sGl~~A~~L~~~g~-~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGSGLFGAVCANELKKLNK-KVLVIEKRN   34 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGTC-CEEEECSSS
T ss_pred             cEEEECCcHHHHHHHHHHHhCCC-cEEEEECCC
Confidence            47899999999999999988898 578887654

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=81.22  E-value=0.74  Score=35.00  Aligned_cols=30  Identities=27%  Similarity=0.473  Sum_probs=25.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEec
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDV  222 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~  222 (372)
                      -|+|+|+|+.|+.++..+.+.|.+ +.+++.
T Consensus         3 DViIIGgGpaGl~AAi~aar~G~~-v~iie~   32 (184)
T d1fl2a1           3 DVLIVGSGPAGAAAAIYSARKGIR-TGLMGE   32 (184)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTCC-EEEECS
T ss_pred             cEEEECcCHHHHHHHHHHHHcCCe-EEEEEE
Confidence            378899999999999999999995 666654

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=80.90  E-value=1.4  Score=32.54  Aligned_cols=89  Identities=20%  Similarity=0.228  Sum_probs=44.3

Q ss_pred             EEEEECC-CHHHHHHHHH-HHHc--CCCeEEEEecChhHHHHHHHhCCCeEEecCCCcccHHHHHHHHHHHcCCcceEEE
Q 017426          192 NVLIMGA-GPIGLVTMLA-ARAF--GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  267 (372)
Q Consensus       192 ~vlI~Ga-g~~G~~ai~l-~~~~--g~~~vv~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  267 (372)
                      +|.|.|| |.+|+-.+++ +.+.  -...+....++...-.... ++.......+.  .+.    ..+     .++|++|
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~-~~~~~~~~~~~--~~~----~~~-----~~~DivF   70 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPS-FGGTTGTLQDA--FDL----EAL-----KALDIIV   70 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCG-GGTCCCBCEET--TCH----HHH-----HTCSEEE
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccc-ccCCceeeecc--cch----hhh-----hcCcEEE
Confidence            7889998 9999999974 5443  3334444443322111111 11111110001  111    111     4799999


Q ss_pred             eCCCcHHHHHHHHHHhccCC---EEEEEc
Q 017426          268 DCAGLNKTMSTALGATCAGG---KVCLVG  293 (372)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~G---~~v~~g  293 (372)
                      -|++...+ ......+...|   .++..+
T Consensus        71 ~a~~~~~s-~~~~~~~~~~g~~~~VID~S   98 (146)
T d1t4ba1          71 TCQGGDYT-NEIYPKLRESGWQGYWIDAA   98 (146)
T ss_dssp             ECSCHHHH-HHHHHHHHHTTCCCEEEECS
T ss_pred             EecCchHH-HHhhHHHHhcCCCeecccCC
Confidence            99997644 34444443344   355554

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=80.77  E-value=0.75  Score=36.12  Aligned_cols=30  Identities=17%  Similarity=0.480  Sum_probs=26.0

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          193 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       193 vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      |+|+|+|+.|+.++..+..+|.+ |.+++.+
T Consensus         5 vvVIG~G~aG~~aA~~a~~~G~k-V~iiE~~   34 (217)
T d1gesa1           5 YIAIGGGSGGIASINRAAMYGQK-CALIEAK   34 (217)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTCC-EEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCE-EEEEecc
Confidence            67889999999999999999995 7777764

>d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.61  E-value=0.8  Score=31.38  Aligned_cols=13  Identities=23%  Similarity=0.235  Sum_probs=10.5

Q ss_pred             eeEEEEEecCCCc
Q 017426           81 CAGVIEKVGSEVK   93 (372)
Q Consensus        81 ~~G~V~~vG~~v~   93 (372)
                      ..|+|+++|++..
T Consensus        38 ~~G~VvavG~g~~   50 (99)
T d1p3ha_          38 QEGTVVAVGPGRW   50 (99)
T ss_dssp             EEEEEEEECCCEE
T ss_pred             eEEEEEEECCceE
Confidence            3699999999753

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=80.61  E-value=1.7  Score=34.86  Aligned_cols=33  Identities=24%  Similarity=0.486  Sum_probs=26.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEEe
Q 017426          188 GPETNVLIMGAGPIGLVTMLAA-RAFGAPRIVIVD  221 (372)
Q Consensus       188 ~~g~~vlI~Gag~~G~~ai~l~-~~~g~~~vv~v~  221 (372)
                      -.|.+|+|.|.|.+|..+++++ +..|+ ++++++
T Consensus        29 l~g~~vaIqG~GnVG~~~a~~L~~e~Ga-~vv~vs   62 (234)
T d1b26a1          29 PKKATVAVQGFGNVGQFAALLISQELGS-KVVAVS   62 (234)
T ss_dssp             TTTCEEEEECCSHHHHHHHHHHHHHHCC-EEEEEE
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHhcCC-ceEEee
Confidence            3688999999999999999987 56799 456553

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=80.59  E-value=0.78  Score=38.14  Aligned_cols=32  Identities=25%  Similarity=0.352  Sum_probs=25.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          192 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       192 ~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      .|+|+|+|.+|++++..+...|.+.|.+++++
T Consensus         3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            58999999999987777777887567888664

>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Malate oxidoreductase (malic enzyme)
species: Thermotoga maritima [TaxId: 2336]

Probab=80.51  E-value=2.9  Score=33.07  Aligned_cols=45  Identities=22%  Similarity=0.291  Sum_probs=35.5

Q ss_pred             HHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEecC
Q 017426          179 VHACRRA-NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVD  223 (372)
Q Consensus       179 ~~~l~~~-~~~~g~~vlI~Gag~~G~~ai~l~~~~g~~~vv~v~~~  223 (372)
                      +.+++.. +--.+.+|++.|+|..|...+++....+.++++.+++.
T Consensus        14 l~a~~~~g~~l~d~riv~~GAGsAg~gia~~l~~~~~~~i~~~D~~   59 (222)
T d1vl6a1          14 LNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK   59 (222)
T ss_dssp             HHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred             HHHHHHhCCChhhcEEEEEChHHHHHHHHHHHHHhcccceEeecce
Confidence            3445543 33356899999999999999999999999999999765